mRNA_P-fluviatile_contig1.378.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig1.378.1 vs. uniprot
Match: A0A6H5KMM6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMM6_9PHAE) HSP 1 Score: 620 bits (1598), Expect = 3.680e-195 Identity = 522/829 (62.97%), Postives = 591/829 (71.29%), Query Frame = 2
Query: 1475 MTSVLQ--GGFLNQVTGGGRXXXXXASNCLSCGAKKSPSEVACYSCQAHVCKSCVDAPRADPIQELRSCETCSKSXXXXXXDVCQDEDCQAAHCRKCSTMEPCQQCGGVFCTESVDEMDCASRCTCDKNICNGCNEECILCNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYCDEEYCLICCAKKTTCVGCGKTPSRPRLVEATAQLKRVQQGIQAGEI-VPPVTPI----VDRHNLSGGSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQERGTNMMPKKAKXXXGXXXXXXXXXXAPAPA------------AAPALAPVPAKHS-PVRAAPAAASSTREMDHSVIKKWVLEVAARRTLATSDEIKRYFHGRVDSDVIDFYLEGFDNNCRATVIQCAEFLSIVVPSGDDGEQGAL-----DDNSDGGSYANAGRDKDEEEG--------VNDDLVTGAFGAKERFKHGDYSAFEHPLEKRANEAKQNDCKDLNVLNAILAEAHGEVGLGKMKKMLKKMVKRITEEREEQAQLRKQNLRKAKNTVISQKLHPAYANKEPTYNSFQPPGV-DRPPDAVMDIHPNVVGLVIGTNGARIKDLQQRTNSTMWVDQSFPPGEMRKLHIHGRKAQVEAAMREVAQLIMTASVNN-RPGKMNPQEAVHVAGGLPPGYPDLRPSSAISFPNGIHKRTVLCPHALVGYLIGKKGVMIKRIKTQSQANVEVFQNLPDGVPRQVFITGGQEAVALATALVEEVIAVGIASDNSSA 3856
MT+VLQ GGFLN+++GG + NCL+C K +P E+ C++CQ+HVCKSC+DA + QE+R XXXXXX CSTME C QC G+FCTE+VD+++CASRCTCD+ IC CNEEC L XXXXXXXXXXXXXXXXXXXXX E+CD+EYCLICCAKKT CV CGK PSRPRL+EATAQLKRVQQG QA EI +PPV PI V + + +AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXX XXXXXXXXXX A PA A +P + P A ST EMDHSVIK+WVLEVA+RR LAT DEIKRYFHGRVD DVIDFY E F +NCRATVIQCAEFL+I VP D +G L D + GG +N +LV GAFGAKER KHGDYSAFEHPLE+RANEAKQNDCKDLNVLNAIL EAHGEVGLGKMKKM+KKMVKRI E REEQ +LR Q++ K K V +QKLHPAYA+KEPT++SF P + D+ PDA++DI PNVVG VIG NGARI D+Q +TN+ MW+DQ+FP G MRKLHIHG K QVEAA+ EV L+ +A VN RP +M P++ H GGLPPG+PDL S K+T+ CPHALVGYLIGKKG MIK IK+ S ANVE+FQ PDG PR VFITG E V LA LV+EVIA G ASDN++A
Sbjct: 1 MTTVLQNGGGFLNRISGGA-----PSKNCLACSGKTTP-EITCHACQSHVCKSCIDASAGEE-QEMRKXXXXXXXXXXXXXXXXXXXXXXXXXXXGCSTMEACHQCDGIFCTEAVDDIECASRCTCDEIICTECNEECNLXXXXXXXXXXXXXXXXXXXXXXXXENFVVTCEFCDKEYCLICCAKKTPCVNCGKKPSRPRLIEATAQLKRVQQGFQASEIMIPPVAPIAGPRVSAESANATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAVPAQAAIPIRTELPXXXXXVVAPSTSEMDHSVIKEWVLEVASRRVLATPDEIKRYFHGRVDEDVIDFYNEEF-SNCRATVIQCAEFLNIEVPPDDQISRGDLKREPEDQGARGGGVXXXXXXXXXXXXXXXXXXXXINSELVAGAFGAKERTKHGDYSAFEHPLERRANEAKQNDCKDLNVLNAILQEAHGEVGLGKMKKMIKKMVKRINETREEQKKLRTQSVVKPKREVSAQKLHPAYASKEPTFSSFAPSTIPDKVPDAMLDIPPNVVGWVIGKNGARINDIQSKTNAAMWMDQNFPDGVMRKLHIHGNKQQVEAAIAEVEFLMKSAPVNTPRPARMGPKQLPH-GGGLPPGHPDLNYS----------KKTIKCPHALVGYLIGKKGAMIKHIKSMSNANVELFQGYPDGHPRDVFITGTAEEVDLAATLVDEVIASGTASDNTAA 810
BLAST of mRNA_P-fluviatile_contig1.378.1 vs. uniprot
Match: D8LI19_ECTSI (Circadian RNA-binding protein CHLAMY 1 subunit C1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI19_ECTSI) HSP 1 Score: 550 bits (1418), Expect = 1.230e-173 Identity = 353/736 (47.96%), Postives = 403/736 (54.76%), Query Frame = 2
Query: 2633 MDHSVIKKWVLEVAARRTLATSDEIKRYFHGRVDSDVIDFYLEGFDNNCRATVIQCAEFLSIVVPSGDDGEQGALDDNSDGGSYANAGRDKDEEEGVNDDLVTGAFGAKERFKHGDYSAFEHPLEKRANEAKQNDCKDLNVLNAILAEAHGEVGLGKMKKMLKKMVKRITEEREEQAQLRKQNLRKAKNTVISQKLHPAYANKEPTYNSFQPPGV-DRPPDAVMDIHPNVVGLVIGTNGARIKDLQQRTNSTMWVDQSFPPGEMRKLHIHGRKAQVEAAMREVAQLIMTASVNN-RPGKMNPQEAVHVAGGLPPGYPDLRPSSAISFPNGIHKRTVLCPHALVGYLIGKKGVMIKRIKTQSQANVEVFQNLPDGVPRQVFITGGQEAVALATALVEEVIAVGIASDNSSAPSALLEHGAPAAGGASSLYGRGAAGGPVFGFVPTHSQATPASSVGHAXXXXXXXXXXXXXXXXXITRDFGDLGGLGNGAAAATTGMNGHADPSFATATAMAIDNLHKAPPSLRGAGAMMEALPAIGIHEDFLAQQEAYRQSQAQFEVQQSQSWQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDARPPFDSVEELLAKAGQIHLLGNFLEHEFDVNAIVLMTQQDFTEIGIPFGPQKKIQKAIREATARLGGAVADNGNGGAGDAAVD--------------------TQANDSRAEQCAICTERPIEVTFVGCGHFICCFSCGTR 4774
MDHSVIK WVLEVA+RR LATSDEIKRYFHGRVD DVIDFY E F N+ RATVIQCAEFL+I VP D++EE+ +N +LV GAFGAKER KHGDYSAFEHPLE+RANEAKQNDCKDLNVLNAIL EAHGEVGLGKMKKM+KKM+KRI E REEQ QLR Q+L K K V SQKLHPAYA+K+PT++SF P + D+ PDA++DI PNVVG VIG NGARI D+Q +TN+ MW+DQ+FP G MRKLHIHG K QVEAA+ EV L+ +A VN RPGKM P++ H GGLPPG+PDL S K+T+ CPHALVGYLIGKKG MIK IK+ S ANVE+FQ PDG PR VFITG + V LA LV+EVIA G ASD+++ G G A S A GPV GF P+ + + +ELLAKAGQ+HLL NFLE EFDVNAIVLM +QDF EI IPFGPQKKIQKAIREATA + A A T+ A+ CAIC E PIEVTFVGCGHFICC +CG R
Sbjct: 1 MDHSVIKNWVLEVASRRVLATSDEIKRYFHGRVDEDVIDFYNEEFSNS-RATVIQCAEFLNIEVPP----------------------EDEEEEDDINSELVAGAFGAKERTKHGDYSAFEHPLERRANEAKQNDCKDLNVLNAILQEAHGEVGLGKMKKMIKKMIKRINETREEQKQLRTQSLLKPKREVSSQKLHPAYASKKPTFSSFAPSTIPDKVPDAMLDIPPNVVGWVIGKNGARINDIQSKTNAAMWMDQNFPDGVMRKLHIHGNKQQVEAAIDEVEFLMKSAPVNTPRPGKMGPKQLPH-GGGLPPGHPDLNYS----------KKTIKCPHALVGYLIGKKGAMIKHIKSMSNANVELFQGYPDGHPRDVFITGTADEVDLAATLVDEVIASGTASDSTAXXXXXXXXGI---GRALSF-----ASGPVLGFNPSSALS----------------------------------------------------------------------------------------------------------------------------------------------------------QELLAKAGQMHLLPNFLEQEFDVNAIVLMEEQDFDEIKIPFGPQKKIQKAIREATANMERAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEDEPRAADLCAICMENPIEVTFVGCGHFICCVTCGNR 540
BLAST of mRNA_P-fluviatile_contig1.378.1 vs. uniprot
Match: D8LI18_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI18_ECTSI) HSP 1 Score: 94.4 bits (233), Expect = 8.000e-18 Identity = 43/57 (75.44%), Postives = 49/57 (85.96%), Query Frame = 2
Query: 1982 EYCDEEYCLICCAKKTTCVGCGKTPSRPRLVEATAQLKRVQQGIQAGEI-VPPVTPI 2149
++CD+EYCLICCAKKT CV C K PSRPRL+EATAQLKRVQQG QA E+ +PPV PI
Sbjct: 12 QFCDKEYCLICCAKKTPCVSCRKKPSRPRLIEATAQLKRVQQGFQASEMMIPPVAPI 68
BLAST of mRNA_P-fluviatile_contig1.378.1 vs. uniprot
Match: D9CJ68_VOLCA (CRB1m n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D9CJ68_VOLCA) HSP 1 Score: 88.6 bits (218), Expect = 4.590e-14 Identity = 74/225 (32.89%), Postives = 111/225 (49.33%), Query Frame = 2
Query: 3149 REEQAQLRKQNLRKAKNTVISQKLHPAYANKEPTYNSFQPPGVDRPPDAVMDIHPNVVGLVIGTNGARIKDLQQRTNSTMWVDQSFPPGEMRKLHIHGRKAQVEAAMREVAQLIMTASVNNRPGKMNPQEAVHVAGGLPPGYPDLRPSSAISFPNGIHKRTVLCPHALVGYLIGKKGVMIKRIKTQSQANVEVFQNLPDGVPRQVFITGGQEAVALATALVEEVI 3823
R++ A L +L++ V S KL A+ P SF PG + + + VG +IG GA I++L+ TN+ + VD + + I GR+ VE A R V LI ++ EAV PPG +++ TV CP +VG +IG+ G I+ ++ S A++ V Q+ PDGVPRQ+ ITG Q+AV AT++V E+I
Sbjct: 83 RDDGASLEAPDLKRPAGDVASLKL----ADDIPLAASFVAPGTESIASETLSCPTDKVGRIIGRAGATIRELEASTNTRIQVDHKALGD--KPVIISGRRDDVENAKRVVQDLICGSN-----------EAV------PPGTGEVQ-------------ETVECPPGIVGRVIGRGGETIRTLQQASGAHILVNQDFPDGVPRQIVITGAQDAVQRATSMVSELI 271
BLAST of mRNA_P-fluviatile_contig1.378.1 vs. uniprot
Match: A0A7S3GY76_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GY76_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 2.570e-12 Identity = 60/202 (29.70%), Postives = 101/202 (50.00%), Query Frame = 2
Query: 3320 VGLVIGTNGARIKDLQQRTNSTMWVDQSFPPGEMRKLHIHGRKAQVEAAMREVAQLIMTASV-NNRPGKM--NPQEAVHVAGGLPPGYPDLRPSSAISFPNGIHKRTVLCPHALVGYLIGKKGVMIKRIKTQSQANVEVFQNLPDGVPRQVFITGGQEAVALATALVEEVIAVGIASDNSSAPSALLEHGAPAAGGASSLYG 3916
VG +IGT GA IK+LQ ++ + + +DQ FPP RK+++ G A V ++ + ++ S+ PG M +P A A+ K+T+ P +VG +IG+ G +I I+ +S A V Q +PDG+P +V ITG + VA +++E++ +G+ + A + +P A+S YG
Sbjct: 23 VGKIIGTGGAVIKELQSKSGARIQIDQDFPPEVPRKINVTGTAAAVTLGIQLIQNVMAGGSMLGGMPGGMGMSPYGAXXXX-----XXXXXXGMGAMQTYGNEAKQTIEVPKMIVGKIIGRGGEVITMIQRKSGARAMVDQQVPDGMPCKVNITGSPQTVAACAQIIQEIM-MGVPVQQAGANLPPPQQASPYGAAAASPYG 218
BLAST of mRNA_P-fluviatile_contig1.378.1 vs. uniprot
Match: A0A835SK22_9CHLO (WW domain-containing protein n=2 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835SK22_9CHLO) HSP 1 Score: 82.4 bits (202), Expect = 4.950e-12 Identity = 59/171 (34.50%), Postives = 89/171 (52.05%), Query Frame = 2
Query: 3311 PNVVGLVIGTNGARIKDLQQRTNSTMWVDQSFPPGEMRKLHIHGRKAQVEAAMREVAQLIMTASVNNRPGKMNPQEAVHVAGGLPPGYPDLRPSSAISFPNGIHKRTVLCPHALVGYLIGKKGVMIKRIKTQSQANVEVFQNLPDGVPRQVFITGGQEAVALATALVEEVI 3823
P+ VG VIG GA I+DL+ T + + VD P + + I GR +VE A R+V LI + G PD P+ G ++++ CP +VG +IG+ G I+ ++ S A++ V Q+ PDGVPRQ+ ITG Q+AV A ++V+E+I
Sbjct: 130 PDKVGRVIGRAGATIRDLEASTGTRIQVDHKAPGD--KPVTISGRADEVERAKRQVLDLI-----SGHGGXXXXXXX----------XPDSAPAP------GEAQKSLECPQGIVGRVIGRGGETIRTLQQASGAHILVNQDFPDGVPRQITITGSQDAVDRAASMVQELI 277
BLAST of mRNA_P-fluviatile_contig1.378.1 vs. uniprot
Match: D8UH03_VOLCA (CRB1f n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8UH03_VOLCA) HSP 1 Score: 82.0 bits (201), Expect = 5.310e-12 Identity = 56/171 (32.75%), Postives = 84/171 (49.12%), Query Frame = 2
Query: 3311 PNVVGLVIGTNGARIKDLQQRTNSTMWVDQSFPPGEMRKLHIHGRKAQVEAAMREVAQLIMTASVNNRPGKMNPQEAVHVAGGLPPGYPDLRPSSAISFPNGIHKRTVLCPHALVGYLIGKKGVMIKRIKTQSQANVEVFQNLPDGVPRQVFITGGQEAVALATALVEEVI 3823
P+ VG +IG GA I+DL+ T++ + VD P + + + GR+ V+ A R V LI A+ P Q TV CP +VG +IG+ G I+ ++ S A++ V Q+ P+GVPRQ+ ITG Q+AV AT++V E+I
Sbjct: 133 PDKVGRIIGRAGATIRDLEASTSTRIQVDHKAPGD--KPVVVSGRRDDVDRAKRAVHDLISGATETTSPSTNEVQG------------------------------TVECPPGIVGRIIGRGGETIRTLQQASGAHILVNQDFPEGVPRQIIITGAQDAVQRATSMVSELI 271
BLAST of mRNA_P-fluviatile_contig1.378.1 vs. uniprot
Match: A0A836BSU0_9CHLO (WW domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836BSU0_9CHLO) HSP 1 Score: 79.0 bits (193), Expect = 5.440e-11 Identity = 62/204 (30.39%), Postives = 98/204 (48.04%), Query Frame = 2
Query: 3272 GVDRPPDA-VMDIHPNVVGLVIGTNGARIKDLQQRTNSTMWVDQSFPPGEMRKLHIHGRKAQVEAAMREVAQLIMTASVNNRPGKMNPQEAVHVAGGLPPGYPDLRPSSAISFPNGIHKRTVLCPHALVGYLIGKKGVMIKRIKTQSQANVEVFQNLPDGVPRQVFITGGQEAVALATALVEEVIAVGIASDNSSAPSALLEHG 3880
G+D P V+ P+ VG VIG GA I+DL+ + + VD + + I G++ V+ R V LI S N PD P++ G ++ + CPH++VG +IG+ G I+ ++ S A++ V Q P+G PR + ITG Q++V A A+VEE+I D++S + + HG
Sbjct: 119 GLDLPSAVEVVMCPPDRVGRVIGRAGATIRDLEGSSGCRIQVDHKAMGD--KPVTISGKREDVDRVKRTVQDLIAGRSAN----------------------PDAPPAA------GEAQKQIECPHSVVGRVIGRGGETIRTLQQASGAHIHVNQEFPEGTPRMITITGNQDSVDRAAAMVEELIR----GDHASTQTVVQRHG 288
BLAST of mRNA_P-fluviatile_contig1.378.1 vs. uniprot
Match: A0A2J7ZWC7_9CHLO (Far upstream element-binding protein 3 n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J7ZWC7_9CHLO) HSP 1 Score: 78.2 bits (191), Expect = 8.800e-11 Identity = 59/169 (34.91%), Postives = 86/169 (50.89%), Query Frame = 2
Query: 3320 VGLVIGTNGARIKDLQQRTNSTMWVDQSFPPGEMRKLHIHGRKAQVEAAMREVAQLIMTASVNNRPGKMNPQEAVHVAGGLPPGYPDLRPSSAISFPNGIHKRTVLCPHALVGYLIGKKGVMIKRIKTQSQANVEVFQNLPDGVPRQVFITGGQEAVALATALVEEVIA 3826
VG VIG GA I+DL+ T++ + VD P + + I G + V+ A R V LI S V G SSAI + K T+ CP +VG +IG+ G I+ ++ S A++ V Q+ PDGVPRQ+ ++G Q+AV A+ +V E+IA
Sbjct: 115 VGRVIGRAGATIRDLEASTSTRIQVDHKAPGD--KPVTISGMREDVDRAKRTVQDLIAGVS------------GVGADAGX---XXXXXXSSAIPSAGEVQK-TLECPQGIVGRVIGRGGETIRTLQQASGAHILVNQDFPDGVPRQITVSGSQDAVERASNMVAELIA 265
BLAST of mRNA_P-fluviatile_contig1.378.1 vs. uniprot
Match: A0A061RZW2_9CHLO (Far upstream element-binding protein n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RZW2_9CHLO) HSP 1 Score: 77.4 bits (189), Expect = 1.870e-10 Identity = 58/173 (33.53%), Postives = 86/173 (49.71%), Query Frame = 2
Query: 3311 PNVVGLVIGTNGARIKDLQQRTNSTMWVDQSFPPGEMRKLHIHGRKAQVEAAMREVAQLIMTASVNNRPGKMNP--QEAVHVAGGLPPGYPDLRPSSAISFPNGIHKRTVLCPHALVGYLIGKKGVMIKRIKTQSQANVEVFQNLPDGVPRQVFITGGQEAVALATALVEEVI 3823
P +VG VIG G I+ LQ + + + +DQ+FP G R++HI GR V+ ++ V +LI PG N Q+ + GG GI +T+ CP +VG +IGK G IK ++ S A +++ Q+ P V ITG +AVA A A V ++I
Sbjct: 249 PGIVGRVIGRGGETIRALQTSSGAHISIDQNFPEGVDRQVHIQGRPDAVDRGLKMVTELIAGG-----PGSANDVIQKVIQKHGG------------------GI-SQTLQCPKTMVGRVIGKGGETIKALQNASGARIQIDQSTE---PMTVTITGAPDAVARAEASVTDII 394 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.378.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig1.378.1 >prot_P-fluviatile_contig1.378.1 ID=prot_P-fluviatile_contig1.378.1|Name=mRNA_P-fluviatile_contig1.378.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1123bp MTSVLQGGFLNQVTGGGRGGGGGASNCLSCGAKKSPSEVACYSCQAHVCKback to top mRNA from alignment at P-fluviatile_contig1:4446594..4464411+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig1.378.1 ID=mRNA_P-fluviatile_contig1.378.1|Name=mRNA_P-fluviatile_contig1.378.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=17818bp|location=Sequence derived from alignment at P-fluviatile_contig1:4446594..4464411+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig1:4446594..4464411+ >mRNA_P-fluviatile_contig1.378.1 ID=mRNA_P-fluviatile_contig1.378.1|Name=mRNA_P-fluviatile_contig1.378.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=6738bp|location=Sequence derived from alignment at P-fluviatile_contig1:4446594..4464411+ (Porterinema fluviatile SAG_2381)back to top |