mRNA_P-fluviatile_contig1.377.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig1.377.1
Unique NamemRNA_P-fluviatile_contig1.377.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig1.377.1 vs. uniprot
Match: D8LI17_ECTSI (Superoxide dismutase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI17_ECTSI)

HSP 1 Score: 392 bits (1006), Expect = 7.410e-138
Identity = 180/196 (91.84%), Postives = 190/196 (96.94%), Query Frame = 1 
Query:    1 MAIVLPELPWAKDALAPHISAETIEYHYGKHHAAYVTKLNAAISANSELAGKDLDEIMKTSTGGVFNNAAQVWNHSFYWKSLSPTGGGEPTGAVKEAIEKKFGSFEEFKKAFSDTAAGHFGSGWAWLVKTDSGDVEVVGTHDASNPVKEGKGTPLLTCDVWEHAYYIDYRNSRPGYIAAWWNLVNWEFANENFAKC 588
            M+IVLPELPWAKDALAPHISAETIEYHYGKHHAAYVTKLNAAIS NSEL GK LDEIMKT++GGVFNNAAQVWNH+FYWKSLSP+GGGEPTGAVKEAIE+KFGSFE FKKAFSDTAAGHFGSGWAWLVKT+SG V+VVGTHDASNPVKEGKGTP+LTCDVWEHAYYIDYRNSRPGYIAAWWNLVNW+FANEN AKC
Sbjct:    1 MSIVLPELPWAKDALAPHISAETIEYHYGKHHAAYVTKLNAAISTNSELEGKSLDEIMKTASGGVFNNAAQVWNHTFYWKSLSPSGGGEPTGAVKEAIEEKFGSFEAFKKAFSDTAAGHFGSGWAWLVKTESGGVDVVGTHDASNPVKEGKGTPILTCDVWEHAYYIDYRNSRPGYIAAWWNLVNWDFANENLAKC 196
[Close]
BLAST of mRNA_P-fluviatile_contig1.377.1 vs. uniprot
Match: A0A7S2V2G5_9STRA (Superoxide dismutase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2G5_9STRA)

HSP 1 Score: 305 bits (780), Expect = 2.000e-103
Identity = 133/195 (68.21%), Postives = 159/195 (81.54%), Query Frame = 1 
Query:    1 MAIVLPELPWAKDALAPHISAETIEYHYGKHHAAYVTKLNAAISANSELAGKDLDEIMKTSTGGVFNNAAQVWNHSFYWKSLSPTGGGEPTGAVKEAIEKKFGSFEEFKKAFSDTAAGHFGSGWAWLVKTDSGDVEVVGTHDASNPVKEGKGTPLLTCDVWEHAYYIDYRNSRPGYIAAWWNLVNWEFANENFAK 585
            MAI LP LP+ K ALAPHIS ET+ +HY KHHA YVTKLNAA+   SE  GK L+EIM  ++GG+FNNAAQ+WNH+FYW S+SP GGGEP+G + +AI   FGSFE FK+ FS +A GHFGSGWAWL K D G +E+V THDASNP+KEGKG P+LTCDVWEHAYYIDYRN+RP YIAAWWN++NW+FAN N+ +
Sbjct:    1 MAIQLPPLPYEKGALAPHISEETLSFHYEKHHAGYVTKLNAALPG-SEFEGKSLEEIMMNASGGMFNNAAQIWNHTFYWNSMSPNGGGEPSGPISDAINSSFGSFESFKEKFSASAGGHFGSGWAWLCKKDDGSLEIVDTHDASNPLKEGKGKPILTCDVWEHAYYIDYRNARPSYIAAWWNVINWDFANSNYTE 194
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BLAST of mRNA_P-fluviatile_contig1.377.1 vs. uniprot
Match: A0A0G4G4J6_VITBC (Superoxide dismutase n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4G4J6_VITBC)

HSP 1 Score: 298 bits (764), Expect = 5.470e-101
Identity = 133/195 (68.21%), Postives = 155/195 (79.49%), Query Frame = 1 
Query:    1 MAIVLPELPWAKDALAPHISAETIEYHYGKHHAAYVTKLNAAISANSELAGKDLDEIMKTSTGGVFNNAAQVWNHSFYWKSLSPTGGGEPTGAVKEAIEKKFGSFEEFKKAFSDTAAGHFGSGWAWLVKTDSGDVEVVGTHDASNPVKEGKGTPLLTCDVWEHAYYIDYRNSRPGYIAAWWNLVNWEFANENFAK 585
            MA  LP LPWAK+ LAPHIS ETI YHYGKHHA YVTKLN  +   +E A KDL +++KT+ GG+FNNAAQ WNHSFYW SLSP+GGGEP GA+K AIE+ FGSF++FK  FS  AAGHFGSGW WLVK   G +++  THDA NP+++G G PLLTCDVWEHAYY+DYRN RP Y+ AWWNLVNW+FAN N AK
Sbjct:    1 MAFQLPALPWAKNGLAPHISEETINYHYGKHHATYVTKLNGLVEG-TENAKKDLADLVKTTDGGLFNNAAQHWNHSFYWNSLSPSGGGEPKGAIKAAIEQDFGSFQKFKDDFSANAAGHFGSGWVWLVKGTDGKLKIHQTHDAGNPLRDGAGVPLLTCDVWEHAYYVDYRNDRPSYVKAWWNLVNWDFANNNLAK 194
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BLAST of mRNA_P-fluviatile_contig1.377.1 vs. uniprot
Match: A0A6V1U4U1_HETAK (Superoxide dismutase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1U4U1_HETAK)

HSP 1 Score: 294 bits (753), Expect = 7.500e-99
Identity = 132/194 (68.04%), Postives = 152/194 (78.35%), Query Frame = 1 
Query:    1 MAIVLPELPWAKDALAPHISAETIEYHYGKHHAAYVTKLNAAISANSELAGKDLDEIMKTSTGGVFNNAAQVWNHSFYWKSLSPTGGGEPTGAVKEAIEKKFGSFEEFKKAFSDTAAGHFGSGWAWLVKTDSGDVEVVGTHDASNPVKEGKGTPLLTCDVWEHAYYIDYRNSRPGYIAAWWNLVNWEFANENFA 582
            M I LP LP+ KDALAPHISAET+EYHYGKHHA YV KLNAAI      A K +D+IM    GG++NNAAQ+WNH+FYWKS+SP+GGG PTG + +AI   FGSF+ FK+ FS  A GHFGSGWAWL K   G + +  THDA N +KEG GTPLLTCDVWEHAYYIDYRN+RP Y+AAWWNL+NWEFANEN A
Sbjct:   33 MPIELPALPYEKDALAPHISAETLEYHYGKHHAGYVAKLNAAIEGTDH-ADKTVDQIMMECEGGLYNNAAQIWNHTFYWKSMSPSGGGAPTGPIADAINASFGSFDAFKEQFSAVAGGHFGSGWAWLCKNADGSLSIQETHDAGNVLKEGLGTPLLTCDVWEHAYYIDYRNARPQYVAAWWNLINWEFANENLA 225
[Close]
BLAST of mRNA_P-fluviatile_contig1.377.1 vs. uniprot
Match: A0A835ZFU3_9STRA (Superoxide dismutase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFU3_9STRA)

HSP 1 Score: 291 bits (744), Expect = 6.970e-98
Identity = 133/196 (67.86%), Postives = 159/196 (81.12%), Query Frame = 1 
Query:    4 AIVLPELPWAKDALAPHISAETIEYHYGKHHAAYVTKLNAAISANSELAGKDLDEIMKTSTGGVFNNAAQ--VWNHSFYWKSLSPTGGGEPTGAVKEAIEKKFGSFEEFKKAFSDTAAGHFGSGWAWLVKTDSGDVEVVGTHDASNPVKEGKGTPLLTCDVWEHAYYIDYRNSRPGYIAAWWNLVNWEFANENFAK 585
            +IVL  LP+AK+ALAPHIS ET+EYH+GKHHAAYVTKLNAAI+A++ L  K L+EIM +S+GG F+NAAQ  V+NH FYW SLSP GGG PTG + +AI++ FG F++FK AF   A GHFGSGWAWLVK D G ++VV THDASNPV E  G P++TCDVWEHAYYIDYRN+RP Y+AAWWNLVNW+FAN N   
Sbjct:    4 SIVLMTLPYAKNALAPHISEETLEYHHGKHHAAYVTKLNAAIAADAGLQNKTLEEIMLSSSGGTFSNAAQASVFNHDFYWHSLSPEGGGTPTGPIADAIKESFGDFDKFKAAFDAAAGGHFGSGWAWLVKADDGSLKVVSTHDASNPVVEKLGKPIITCDVWEHAYYIDYRNARPSYLAAWWNLVNWDFANVNLGN 199
[Close]
BLAST of mRNA_P-fluviatile_contig1.377.1 vs. uniprot
Match: W7T7U7_9STRA (Superoxide dismutase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T7U7_9STRA)

HSP 1 Score: 290 bits (743), Expect = 8.920e-98
Identity = 133/196 (67.86%), Postives = 154/196 (78.57%), Query Frame = 1 
Query:    1 MAIVLPELPWAKDALAPHISAETIEYHYGKHHAAYVTKLNAAISANSELAGKDLDEIMKTS-TGGVFNNAAQVWNHSFYWKSLSPTGGGEPTGAVKEAIEKKFGSFEEFKKAFSDTAAGHFGSGWAWLVKTDSGDVEVVGTHDASNPVKEGKGTPLLTCDVWEHAYYIDYRNSRPGYIAAWWNLVNWEFANENFAK 585
            MAI LP LPW K+ALAPHISAETI+YHYGKHHAAYVTKLN  I  +   AGK + EIM  +  GG+FNNAAQVWNH+FYW S++P  GG P+G + + I   FGSF+ FK  FS  AAGHFGSGWAWLV  D G +EVV THDASNP+KEG GTPLLTCDVWEHAYY+DYRN+RP Y+ AWW+LVNWE+AN   A+
Sbjct:    1 MAIELPPLPWDKNALAPHISAETIDYHYGKHHAAYVTKLNGMIKDDPAYAGKSVKEIMLAAPAGGLFNNAAQVWNHTFYWNSMAPNAGGAPSGPIADKINAAFGSFDNFKSQFSTAAAGHFGSGWAWLVLKD-GKLEVVSTHDASNPLKEGLGTPLLTCDVWEHAYYVDYRNARPAYVEAWWSLVNWEWANARLAE 195
[Close]
BLAST of mRNA_P-fluviatile_contig1.377.1 vs. uniprot
Match: A0A356T2V4_9DELT (Superoxide dismutase n=2 Tax=Myxococcales TaxID=29 RepID=A0A356T2V4_9DELT)

HSP 1 Score: 287 bits (734), Expect = 1.760e-96
Identity = 128/190 (67.37%), Postives = 154/190 (81.05%), Query Frame = 1 
Query:    1 MAIVLPELPWAKDALAPHISAETIEYHYGKHHAAYVTKLNAAISANSELAGKDLDEIMKTSTGGVFNNAAQVWNHSFYWKSLSPTGGGEPTGAVKEAIEKKFGSFEEFKKAFSDTAAGHFGSGWAWLVKTDSGDVEVVGTHDASNPVKEGKGTPLLTCDVWEHAYYIDYRNSRPGYIAAWWNLVNWEFAN 570
            MA  LPELP+AKDALAPHIS ET+E+HYGKHH  YV KLN A+  ++ L GK L++++KT  GGVFNNAAQVWNH+FYW SLSP GGGEPTG + +AI+K FGSF +FK+ FS  A+GHF SGWAW+V +  G +++V  HDA NP+  GK TP+LTCDVWEHAYYIDYRN+RP YIAAWWNLVNW+ AN
Sbjct:    1 MAFTLPELPYAKDALAPHISKETLEFHYGKHHQGYVNKLNKAVEDDASLQGKSLEDLIKTQKGGVFNNAAQVWNHTFYWNSLSPNGGGEPTGKIADAIKKSFGSFSDFKEQFSKAASGHFASGWAWVVTSGDG-LDIVDLHDAGNPLTMGK-TPVLTCDVWEHAYYIDYRNARPDYIAAWWNLVNWDHAN 188
[Close]
BLAST of mRNA_P-fluviatile_contig1.377.1 vs. uniprot
Match: A0A661MY79_9DELT (Superoxide dismutase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A661MY79_9DELT)

HSP 1 Score: 284 bits (726), Expect = 3.020e-95
Identity = 128/192 (66.67%), Postives = 155/192 (80.73%), Query Frame = 1 
Query:    1 MAIVLPELPWAKDALAPHISAETIEYHYGKHHAAYVTKLNAAISANSELAGKDLDEIMKTSTGGVFNNAAQVWNHSFYWKSLSPTGGGEPTGAVKEAIEKKFGSFEEFKKAFSDTAAGHFGSGWAWLVKTDSGDVEVVGTHDASNPVKEGKGTPLLTCDVWEHAYYIDYRNSRPGYIAAWWNLVNWEFANEN 576
            MA  LP LP+ KDALAPHISA T+ +HYGKHH  YV KLNAA  A+S +AGK L+++++T+ GGVFNNAAQ+WNH+ YW S+SP GGGEPTG + EAI+  FGSF +FK  FS TAAGHFGSGWA+LVK D   + +VG HDA NP+++GK TPLLTCDVWEHAYY+DY+N+RP YI AWWNLVNW+FA  N
Sbjct:    1 MAFELPALPYEKDALAPHISANTLGFHYGKHHQGYVNKLNAAAEADSSIAGKSLEDLVRTAEGGVFNNAAQIWNHTCYWNSMSPDGGGEPTGKIAEAIKASFGSFSDFKDQFSKTAAGHFGSGWAFLVK-DGDRLAIVGEHDAGNPLRDGK-TPLLTCDVWEHAYYLDYQNARPKYIEAWWNLVNWKFAESN 190
[Close]
BLAST of mRNA_P-fluviatile_contig1.377.1 vs. uniprot
Match: A0A2T6E734_9GAMM (Superoxide dismutase n=4 Tax=Saccharospirillum TaxID=231683 RepID=A0A2T6E734_9GAMM)

HSP 1 Score: 282 bits (721), Expect = 1.800e-94
Identity = 129/195 (66.15%), Postives = 154/195 (78.97%), Query Frame = 1 
Query:    1 MAIVLPELPWAKDALAPHISAETIEYHYGKHHAAYVTKLNAAISANSELAGKDLDEIMKTSTGGVFNNAAQVWNHSFYWKSLSPTGGGEPTGAVKEAIEKKFGSFEEFKKAFSDTAAGHFGSGWAWLVKTDSGDVEVVGTHDASNPVKEGKGTPLLTCDVWEHAYYIDYRNSRPGYIAAWWNLVNWEFANENFAK 585
            MA  LP LP+AKDAL PHIS ET+EYH+GKHH  YVTKLN  +   +E  GK L++I+K+++GG+FNNAAQ+WNH+FYW  LSP GGG PTGAV +AI  K+GSF+ F+K F + AAG+FGSGW WLVK   G VE+V T DA  P+  G+ TPLLT DVWEHAYYIDYRNSRP Y+AA+W LVNWEFANENFAK
Sbjct:    1 MAFELPALPYAKDALEPHISQETLEYHHGKHHNTYVTKLNGMVPG-TEFEGKSLEDIIKSASGGMFNNAAQIWNHTFYWHCLSPNGGGAPTGAVADAINGKWGSFDAFQKEFDEKAAGNFGSGWTWLVKNSDGSVEIVNTDDAGTPITSGQ-TPLLTVDVWEHAYYIDYRNSRPDYLAAFWKLVNWEFANENFAK 193
[Close]
BLAST of mRNA_P-fluviatile_contig1.377.1 vs. uniprot
Match: A0A0G4GGW9_VITBC (Superoxide dismutase n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GGW9_VITBC)

HSP 1 Score: 282 bits (722), Expect = 1.850e-94
Identity = 125/194 (64.43%), Postives = 148/194 (76.29%), Query Frame = 1 
Query:    1 MAIVLPELPWAKDALAPHISAETIEYHYGKHHAAYVTKLNAAISANSELAGKDLDEIMKTSTGGVFNNAAQVWNHSFYWKSLSPTGGGEPTGAVKEAIEKKFGSFEEFKKAFSDTAAGHFGSGWAWLVKTDSGDVEVVGTHDASNPVKEGKGTPLLTCDVWEHAYYIDYRNSRPGYIAAWWNLVNWEFANENFA 582
            +A  LP+LP+  DAL PHISAET+ YH+GKHHAAYV KLN  I     LA K L+EI+K   G VFN AAQ+WNH+FYW  + P GGG PTGAVK+ I+  FGSF+ FK+ FS  AAGHFGSGWAWLV  D G +++VG HDA NP+K+G G  +LTCDVWEHAYY+DYRN RP Y+AAWWNLVNW+FAN N A
Sbjct:    9 LAFKLPDLPYKLDALQPHISAETLSYHHGKHHAAYVNKLNQLIEGRPALASKTLEEIIKGEDGIVFNQAAQIWNHTFYWSCMKPGGGGLPTGAVKDKIDAAFGSFDAFKEQFSTAAAGHFGSGWAWLVAGDDGKLKIVGGHDAMNPMKDGSGKAILTCDVWEHAYYVDYRNERPKYVAAWWNLVNWDFANANLA 202
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.377.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LI17_ECTSI7.410e-13891.84Superoxide dismutase n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A7S2V2G5_9STRA2.000e-10368.21Superoxide dismutase n=1 Tax=Fibrocapsa japonica T... [more]
A0A0G4G4J6_VITBC5.470e-10168.21Superoxide dismutase n=1 Tax=Vitrella brassicaform... [more]
A0A6V1U4U1_HETAK7.500e-9968.04Superoxide dismutase n=1 Tax=Heterosigma akashiwo ... [more]
A0A835ZFU3_9STRA6.970e-9867.86Superoxide dismutase n=1 Tax=Tribonema minus TaxID... [more]
W7T7U7_9STRA8.920e-9867.86Superoxide dismutase n=2 Tax=Monodopsidaceae TaxID... [more]
A0A356T2V4_9DELT1.760e-9667.37Superoxide dismutase n=2 Tax=Myxococcales TaxID=29... [more]
A0A661MY79_9DELT3.020e-9566.67Superoxide dismutase n=1 Tax=Deltaproteobacteria b... [more]
A0A2T6E734_9GAMM1.800e-9466.15Superoxide dismutase n=4 Tax=Saccharospirillum Tax... [more]
A0A0G4GGW9_VITBC1.850e-9464.43Superoxide dismutase n=2 Tax=Vitrella brassicaform... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:4439185..4445566 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score394.0
Seed ortholog evalue4e-107
Seed eggNOG ortholog2880.D8LI17
Preferred nameSODB1
KEGG koko:K04564
KEGG Pathwayko04013,ko04068,ko04146,ko04211,ko04212,ko04213,ko05016,map04013,map04068,map04146,map04211,map04212,map04213,map05016
EggNOG free text desc.oxidoreductase activity, acting on superoxide radicals as acceptor
EggNOG OGsCOG0605@1,KOG0876@2759
EC1.15.1.1
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionManganese/iron superoxide dismutase, N-terminal
Ec32 orthologEc-04_002870.1
Exons7
Model size591
Cds size591
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815328.0178008-CDS-P-fluviatile_contig1:4439184..44392431622815328.0178008-CDS-P-fluviatile_contig1:4439184..4439243Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4439185..4439243 -
1693561504.954647-CDS-P-fluviatile_contig1:4439184..44392431693561504.954647-CDS-P-fluviatile_contig1:4439184..4439243Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4439185..4439243 -
1622815328.0288427-CDS-P-fluviatile_contig1:4439781..44398361622815328.0288427-CDS-P-fluviatile_contig1:4439781..4439836Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4439782..4439836 -
1693561504.9662316-CDS-P-fluviatile_contig1:4439781..44398361693561504.9662316-CDS-P-fluviatile_contig1:4439781..4439836Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4439782..4439836 -
1622815328.0404384-CDS-P-fluviatile_contig1:4441097..44411661622815328.0404384-CDS-P-fluviatile_contig1:4441097..4441166Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4441098..4441166 -
1693561504.975956-CDS-P-fluviatile_contig1:4441097..44411661693561504.975956-CDS-P-fluviatile_contig1:4441097..4441166Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4441098..4441166 -
1622815328.050235-CDS-P-fluviatile_contig1:4441880..44420751622815328.050235-CDS-P-fluviatile_contig1:4441880..4442075Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4441881..4442075 -
1693561504.984092-CDS-P-fluviatile_contig1:4441880..44420751693561504.984092-CDS-P-fluviatile_contig1:4441880..4442075Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4441881..4442075 -
1622815328.0633852-CDS-P-fluviatile_contig1:4442722..44428321622815328.0633852-CDS-P-fluviatile_contig1:4442722..4442832Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4442723..4442832 -
1693561504.9937458-CDS-P-fluviatile_contig1:4442722..44428321693561504.9937458-CDS-P-fluviatile_contig1:4442722..4442832Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4442723..4442832 -
1622815328.0779867-CDS-P-fluviatile_contig1:4444678..44447151622815328.0779867-CDS-P-fluviatile_contig1:4444678..4444715Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4444679..4444715 -
1693561505.0033906-CDS-P-fluviatile_contig1:4444678..44447151693561505.0033906-CDS-P-fluviatile_contig1:4444678..4444715Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4444679..4444715 -
1622815328.092663-CDS-P-fluviatile_contig1:4445500..44455661622815328.092663-CDS-P-fluviatile_contig1:4445500..4445566Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4445501..4445566 -
1693561505.0129604-CDS-P-fluviatile_contig1:4445500..44455661693561505.0129604-CDS-P-fluviatile_contig1:4445500..4445566Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4445501..4445566 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.377.1prot_P-fluviatile_contig1.377.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig1 4439185..4445566 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig1.377.1

>prot_P-fluviatile_contig1.377.1 ID=prot_P-fluviatile_contig1.377.1|Name=mRNA_P-fluviatile_contig1.377.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=197bp
MAIVLPELPWAKDALAPHISAETIEYHYGKHHAAYVTKLNAAISANSELA
GKDLDEIMKTSTGGVFNNAAQVWNHSFYWKSLSPTGGGEPTGAVKEAIEK
KFGSFEEFKKAFSDTAAGHFGSGWAWLVKTDSGDVEVVGTHDASNPVKEG
KGTPLLTCDVWEHAYYIDYRNSRPGYIAAWWNLVNWEFANENFAKC*
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mRNA from alignment at P-fluviatile_contig1:4439185..4445566-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig1.377.1 ID=mRNA_P-fluviatile_contig1.377.1|Name=mRNA_P-fluviatile_contig1.377.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=6382bp|location=Sequence derived from alignment at P-fluviatile_contig1:4439185..4445566- (Porterinema fluviatile SAG_2381)
ATGGCGATCGTGCTCCCGGAACTACCATGGGCCAAGGATGCCCTAGCCCC
TCACATCAGTGCTGAAGTGAGTTGTTTGGCAGCAGAAGCAGAACCACTTG
ATTCGCGATCACCGCGCTAAAATAGAGCCACTTTGAAATGCCCCGCGACG
CCCAAAATAAATCCTACACCCCAGACACAGGCGCTGGCACCCTTTCGTCT
TCAAGCAATCGCTGGTGTTGTTGGTGCATATCGCACTCCGGTCCTGACGG
ATTGTTACCCGGCCATGATCCCCTTGTGTATCGACAGGCGAATTGAAGGA
ATGTTAAACTTGAGCGTTGTCTGCATCGCAGCGATCACTTCTCTCAACGT
CCCCTCGCTGTTGTTGTGTCCAATAATGCAACAATACTGAACCCGCTCCT
GACCACAGCAGTTTCTTGAAAGGTATGACGACGAAATGTGCCTGGTGTTT
CCTGATATCGTGCGATCAGTAGAAGAGACTCCACCTAAGGAAGACGAAGA
TATCCCTCCCAATGAGGTTTGGCTAATTTTTCTGAAGATTTTGCGCTCGT
GTAGCGGGGTCCTGTCGCACGCAACAAACGCATACAGACGTTATTGTGCA
ACACTATTAACAGTTGTCCCGTCAACGGAAGGACACGAGAGCACGACGCC
CCGCGAACCAAACCCGGCTTCTCCCTTTGAAGCCTTTGTTTCGCCGACCT
CGGACGCGCGTCTGTCCTCAAGTCCCAAGCGCGCGCCTCCCTGTCCTCCC
CTGCTTCTTTATGCCGCCCTCGTCCCTCTCTCGGGTCTTGCTCTCGTTGT
ACCCCGCTACCCTGGTCTCGTCCTCCCCGTGCCCCCCTTCCCTCTCCGCA
GACCATCGAGTATCACTACGGGAAGCACCATGCCGCATGTGAGTTGTGTA
CCTCTTTTCTCCTTCTTCCTGCGGTAGGGTTTGACTCGCGCTCATTTTCG
TGTGAACAAGTCCAAGGAAGGACGACGAGACTGATCCACAGCACAACCAC
GACCGAAGCGGAGTGCGGCGTGCACTCTCTGTGCGGAAAGAGCACACCAC
GTATCTTCAAGTCTTAATTCTGTCCAGGTGTTTTTTTGATAGATGCTTGA
TGGAATTGTACGAATGTTAGATCCGTGCGTGTGCGTATGCATGTGCGTCC
TATCCTTAGTGCCCCGATTTCTCCACCCATCCATGACGTGTAGCGAGCTT
GCATGATGCACTCTTGGTGTTGAAGCCCGTTTAGCGACCCCTTCCCATTA
GGATTGGGTACTAGGCTAGTACATACTGGCCGAATACCGGCACTGGCCAA
TTATTGGCAGTGGCTGGTAGACGGCCAGTACCACCATCACACGCTTCTTG
GACGTTGAACGTCTGTTTGACATATCACAACCAGGCAAAACCTGGAGAGC
ACGAGGGAGAAGGAGGGGAGAAGGAAAGAAAAGAGAAATCTGAGGCACGG
ACACATGTATAGGCTACCGTAGTGTCGTTTGATTTTTCCCTGGTGGTGGG
ATCTTTGTCTTATTTCACTTGAGTCTACCTCGGGGATGAATTCTAAAGGA
CGGATTTTTTTTTGCGATAAATACCCTGGCGGGAAATGAACACTGGCGGG
AAGGCACATACGCCGCGCACGCGCTTTGCACAGCTCTTCACTGAACTGAC
ATGGGAAAGATGTACGAGCATCAGTTTAGCCAGAAAAGGGCGGAGAGCAG
CACGTTGGGATCCTTGAAGTCTGCGGGTGATGATGCTGCCCCCCCCCCGC
CTACTCATTGTCTGTTATGAACACACATCGCATATGTTGTGGTGCACACG
TTTGGTTTTATCTCTGTCAAGCAACTGATTGAGAAATCGGGAAAACCTCG
GAGGCAAAAACCTGAGGGGAAATTCAAAAGGGGCAGGGGATCCTGATATT
TTAAATCATTATATCCCTGGGGAAAATTTATTATTGGAACCTTTTCGGCC
GAAAATTGGAGTGGGGGGGGGGAGGGGATCAACAGAGATTACGGTATACA
CCACCCCCCAACGAGCTCGTCATTCTGTATCATTAGCTTAGAGAATGCAG
CTTTAATTTTCGAACGCTTTTCAATAACCCTGGTCTCTTCTCATTCGATA
TGTTCTATGCCAAGGAATCGCCATAAATGACGAACGACATGTCATCCGGG
TTTCGTATTCTGCGGTTCAACCTTCTAGACAACGTACCGACTGCAGCCCT
CTTTCTGCCGCCTTCGTGTCGTCGGGGTCTGTCAATTGTCCTGCGGTGTT
ATTGGTGACTGGCGGGAACCTTATACCCGTTTCATCTGAGTATTCTGGGT
ATCTGCATCGTTTTTCTCACATTACATGGTTGGAACTTTGCCTTTTGCGA
CGAAGCGTTGGTGGTAATGAGGGGCTTCACTGTCTGCAGGCACGTCCAAA
TTGCATGATGGTCCCCTTTTGCCCATTTGTCTCATTTTTTTAGCTGTATT
TTCCCACATGAAGCCTCAACGGCGAGGGCAAAAAGAACTGAATTTGTACC
TCCTAGTGAAACCAGATCGCGTAAAAAATCGCCTCCGGTGAAGTGCGTCC
AGCGGGGCTTCCAGGTGCGCCTCCGGCGAAGCCTCGTCATCAGCCGGGGG
GGGGCGGGGGGGGGGGGGGGGGGGGGGGCGTGGACTGATAGTACCCGGTA
AAACTGGCTGCTACGTCCCCAAGCGTGGTTGTCGTGGCCTCGTGCGTTGG
TTTCTTCGCTCACTTTTGAATTTCTCTCGCCCAGATGTGACGAAGCTCAA
CGCGGCCATCTCTGCCAACTCGGAGCTGGCGGGGAAGGATCTTGACGAGA
TCATGAAGACAAGCACGGGTGGTGTCTTCAACAACGCCGCTCAGGTACAC
GAATGGGCACCGCTTTTCCCGAGACAGACGACTTTTTCAATCGATCAGAT
ATGAGAGTTCGTGAGTCCCTGTTTCTTAGGCTTTTTGAGCACGGAAAGCT
CGGCACGGAATCGGATTAAGACCACACTGGACTTTCAGCGATTTGTAATT
GGTGATCGCTGGGGTGTCGCTCAGTCCAAAGCACCGCTCTGCTCGGGACA
CAATAGAGACGAGGTGCTGCTTCACTGTACGGTGCTCAAGCGAGCACTCG
CGAGCTAAGAAATGGGCACTAAGACGACTGGGTCCTTGCGGTTTGCTCTC
ATTGCCGGTTGTGGTCGGGAAATCTGTTTCTCGCCCCCGCCAACATCTCG
TCAAACATTTCGCCTGTCCCCGGCGCTGCCCAACTGGTACGTATTATTGG
TAGATGGAAAATTGCTGCCGTTGTTTGGGCTTGCACTCCTGAGTTGGTAC
TGTGGCCGTGTGAATTCAAGGACCAGGGCACTGCTCGAAACTACACTGCG
TTTTGCGTTTGAGCCAAAAAGTATTAGTGAAAAGGATCGCTGCCTATTGC
CGCACATGTGTGCGGTAGCACCCTAGGGTGCTTGTCCTTCGCTCACCTAT
GGTGTCTCTTGCTTTCGGTTGTCAATCCGTTACGTCGTCAGGTGTGGAAC
CACAGCTTCTACTGGAAGTCACTCAGCCCTACGGGGGGCGGCGAGCCCAC
GGGCGCCGTGAAGGAGGCGATCGAGAAGAAATTCGGCTCGTTCGAAGAGT
TCAAGAAGGCCTTCAGCGACACAGCGGCCGGCCACTTCGGGTCCGGGTGG
GCGTGGCTTGTCAAGACCGACTCCGGCGACGTTGAAGTGAGTTGGGGAGG
GGCGCAGGGCGTGTGTCAGGCAAACGTGTAGGCAGGCTTTTGGCCGTGCG
CCACTCGCATCGGGCTAGCCCGCTTGTTTCGGACCAGTCCGACCACGCCC
TCCGTTGTTTGTGCGGCGGGACGCACAGACACGGAACTTTCTTCGCAAGC
AAGCACCCCTTCCCCACACACACGAATCAAAGAGTCACAAAAGGCACAAC
GGACAAAGTTACAGCTCGCAATGCTCCTTTTCTACAGTTCTAGAGAGAGG
CTCGTGTTTGTGAGCGGGCCAGGGTCCGAACATAAATGTGTATGTTCGTG
AGTATGGTGCGCCGCTGCGGAAGGGCTCTCGTGGCGTTGGTTGCGCGTCG
CTCTTGCAGCTCAAATAGGAGATTTGATGAACGGTGTTACGTAGTCGGCA
CGCTGCGCTGAAGCGTGGACCGGATGGTGGACGCGCTTTATTCTGGTTCA
GGTACAGTCGCACCGGAAGCCCGGAAGCGAAAACCAAGGATTTGAAATAG
CCCTCCGGTCGCCTTCACCTTCCCTTCCTCGCTCCCTTTCATTTTCGTTC
TGAACCAGGCTGCTGGTGCTGGTGAACTCAGTCCCTGAGCCTGAACGGTT
TCTTTGGCTTTTCGCATGCCCTTCGCTTCCGCTTTCGCTTCCGCCGGCGC
CGCTGTCACTTCTGTGTTGTCATCTGTTTTGTCATTTTTCGATCGGCCAG
GTGGTGGGAACCCACGACGCGTCCAACCCCGTGAAGGAAGGCAAGGGAAC
GCCCCTCCTGACGTGTGACGTGAGTGTAAATCGGCATAATAGATTGAGAG
GGAGGAAGATAGAGTCGATGCGCGATGCGTCATTATGTTGGGCAACGGAT
AGCAGACGGGCCTATCGATTGGGTTAAGACGGGACCGCACTTGTTCCGGG
CTTGCGCCACAGTAGTATTCTGCGCCGGCTTTCTGTCGCGGTTTCGACGC
ACGCTCCAGGCGCCTAAGCACTTCGCGTGCATGCGCGCGCTGACTCTAAA
ACTACGCAATCGGGGCTGGGTCGGCGGGACGAGCGAAGGCCAAAAGGTGT
AGATGTCCAGGGACACCCCGTGTCTGGTCCTCCGCCCCCCCGCGGCTCCT
GCAGAGGCGGCGGGGGCATCGCGCGGCGGCGGTCGAAGCTAGAACGCCTG
CGAGTGTGGATGCGTGGGCAGCTGTCCAGTGTCCTCAAGCGAAATCCATG
CTCCACCCGCGTCGATGCAGGAGAGCGTATTGAAACACAGAAGCGCTGTA
GAAGCGATACGAGCGCGGACAGCAGCGACGCTAACGGATATGTCGTTCCT
CCAGGTCCTGTTGATGTGCTGCTCTGCATCGACGTGGGAGAGACAGGCAT
GTCGCTTGAATGCACTTGCAGCCGCCCCCACATCCACGCAAGCCTTCATG
CTCGACCGCCGCCGCTGGTCCCGCCACCCCTGCACGGGCTCCGTGGGGAT
TCTGGAAAGCGACGTTGGATCAGTCCAGTCGACCATCCCAAGATGTCGCT
CAGACAAGTACAAACCCTTCCGAATCCTCGATGCCACGGCAATGTTCAGT
GACCAAACTGCCCTCTTCTCGGGCATCGAGCGGTGCTCTGGTTTCTCTCG
GCCAACGGGTTTGAGGCCAGGTTGCGTCTCGTCTAGGCAAGAGTTCAAGT
TTGCAACTAGATGCACAAGAACACAGAAATGCAAAAAGAATTCCTCACCT
CTGTGGTGGCCCCCACTCGTCGAGAGGTGGGGCTGTTCCTCTTGCCGCGT
TTGTGCGGGGCAGTATCAAACATGTTTCGTAAGTTCGTGATGGCGCAAAG
CAGCGATCAACTGGCTTCGCGCGCGCAACACGTTCAAACGCGCACAGGAA
TGCCCATCGACTCAGAACCTCAGATTGAAAGATTTCTTTTTGTGCTGTAC
GTCAGCAGAACCGAGTCGGTCTCAAGCAACATTTTCCCGGCTGTTAGCCC
GGGTCGGGGTGCGTTCTCACGTCGTCGTCGTTGTCGTCTTCGTGGTCGCC
GCTGTTGCTGTCATTTTCGTTTCACTTCAGGTGTGGGAGCACGCCTACTA
CATTGACTACCGCAACTCCCGGCCGGGATACATTGGTGAGAGCGAAAGCG
CAGCTTGGTTAATGGTCGTGTGTGCCAGCTTGTTGCAATTACCGGGGAAA
CTACGAGAGGCGCGCACCCCGTCGACGCCGGCACAATCTTGCCCCCTTTC
TCTGCACTAGAGCGCGGAGACACGAGTTCTCTCCGCCAGACTTGACGAGT
TTTTCGCCCCCACGCAGACGGATCCTCCACGTGTGCCGGCACTTGCCAGG
CCAAAAGCATACGCCCCTGGCATGTACACGACTTGGAGATTCTTGAGTTT
GAGTACAGGCCTGAGTGCTCGTGCCTATGCGAGTTGATCAGCATTTTGTG
GGGCACGAGAATTGGTATCAACACCTAATTTTTCATGAACTGGCTCAGAT
GTCGAGAGTTGCTCCTCACCAGGGTAGCATCAGCGTCTGCCGTAGCCTCT
CTCCTTGGGTCGGTCCTCGAAGGAGACGATCATGCGCGCTCACATTTCGT
GGAAAGACACTATACTATTTCGTACCCCACCCCACCCCTGCCCGCCGATG
ATGCCCCACTACCCTTCTCCCAGCGGCATGGTGGAACTTGGTCAACTGGG
AGTTCGCCAACGAGAACTTCGCCAAGTGCTGA
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Coding sequence (CDS) from alignment at P-fluviatile_contig1:4439185..4445566-

>mRNA_P-fluviatile_contig1.377.1 ID=mRNA_P-fluviatile_contig1.377.1|Name=mRNA_P-fluviatile_contig1.377.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1182bp|location=Sequence derived from alignment at P-fluviatile_contig1:4439185..4445566- (Porterinema fluviatile SAG_2381)
ATGGCGATCGTGCTCCCGGAACTACCATGGGCCAAGGATGCCCTAGCCCC
TCACATCAGTGCTGAAATGGCGATCGTGCTCCCGGAACTACCATGGGCCA
AGGATGCCCTAGCCCCTCACATCAGTGCTGAAACCATCGAGTATCACTAC
GGGAAGCACCATGCCGCATACCATCGAGTATCACTACGGGAAGCACCATG
CCGCATATGTGACGAAGCTCAACGCGGCCATCTCTGCCAACTCGGAGCTG
GCGGGGAAGGATCTTGACGAGATCATGAAGACAAGCACGGGTGGTGTCTT
CAACAACGCCGCTCAGATGTGACGAAGCTCAACGCGGCCATCTCTGCCAA
CTCGGAGCTGGCGGGGAAGGATCTTGACGAGATCATGAAGACAAGCACGG
GTGGTGTCTTCAACAACGCCGCTCAGGTGTGGAACCACAGCTTCTACTGG
AAGTCACTCAGCCCTACGGGGGGCGGCGAGCCCACGGGCGCCGTGAAGGA
GGCGATCGAGAAGAAATTCGGCTCGTTCGAAGAGTTCAAGAAGGCCTTCA
GCGACACAGCGGCCGGCCACTTCGGGTCCGGGTGGGCGTGGCTTGTCAAG
ACCGACTCCGGCGACGTTGAAGTGTGGAACCACAGCTTCTACTGGAAGTC
ACTCAGCCCTACGGGGGGCGGCGAGCCCACGGGCGCCGTGAAGGAGGCGA
TCGAGAAGAAATTCGGCTCGTTCGAAGAGTTCAAGAAGGCCTTCAGCGAC
ACAGCGGCCGGCCACTTCGGGTCCGGGTGGGCGTGGCTTGTCAAGACCGA
CTCCGGCGACGTTGAAGTGGTGGGAACCCACGACGCGTCCAACCCCGTGA
AGGAAGGCAAGGGAACGCCCCTCCTGACGTGTGACGTGGTGGGAACCCAC
GACGCGTCCAACCCCGTGAAGGAAGGCAAGGGAACGCCCCTCCTGACGTG
TGACGTGTGGGAGCACGCCTACTACATTGACTACCGCAACTCCCGGCCGG
GATACATTGGTGTGGGAGCACGCCTACTACATTGACTACCGCAACTCCCG
GCCGGGATACATTGCGGCATGGTGGAACTTGGTCAACTGGGAGTTCGCCA
ACGAGAACTTCGCCAAGTGCTGACGGCATGGTGGAACTTGGTCAACTGGG
AGTTCGCCAACGAGAACTTCGCCAAGTGCTGA
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