mRNA_P-fluviatile_contig1.358.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig1.358.1
Unique NamemRNA_P-fluviatile_contig1.358.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig1.358.1 vs. uniprot
Match: D7G7C1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7C1_ECTSI)

HSP 1 Score: 235 bits (600), Expect = 6.000e-62
Identity = 115/186 (61.83%), Postives = 141/186 (75.81%), Query Frame = 3 
Query:  453 QSLRLKTLVEGRQLVT-RSGANDWTNIAKQIPAKTDLQCMLHWNHVMDPHLAKGKGSWTPEEDRRVLELVREHGQKWSVVATRLSAEMTNKAIDTAAGAATSGSMQRKSRVGKQIRDRYLHHLDPNLKKGEWTPDEERILAREHAIHNNRWAKIAKSLLGRCDNDIKNHWHANQRRLMDRAQEQTS 1007
            QSLRL+ LVE RQLV   SGA DWTNIA++IP KTDLQCMLHWNHV++P L KGKGSW  EED R+++LV  HG+KWSV+A++L AE              +G M   +RVGKQIR+RYLHHLDPNLKKG+W+ +EE IL REH IH N+WA+IAKSL GRC NDIKNHW+A++RR  + ++  TS
Sbjct:  369 QSLRLRQLVEERQLVVGTSGAKDWTNIARKIPPKTDLQCMLHWNHVINPELTKGKGSWKQEEDERIIQLVEHHGKKWSVIASQLKAE--------------NGKM---TRVGKQIRERYLHHLDPNLKKGDWSVEEEEILVREHGIHKNKWAQIAKSLPGRCSNDIKNHWYAHERRQREISRASTS 537
[Close]
BLAST of mRNA_P-fluviatile_contig1.358.1 vs. uniprot
Match: P10242-12 (Isoform 12 of Transcriptional activator Myb n=7 Tax=Hominidae TaxID=9604 RepID=P10242-12)

HSP 1 Score: 152 bits (385), Expect = 2.650e-37
Identity = 88/206 (42.72%), Postives = 118/206 (57.28%), Query Frame = 3 
Query:  435 TRWTAEQSLRLKTLVEGRQLVTRSGANDWTNIAKQIPAKTDLQCMLHWNHVMDPHLAKGKGSWTPEEDRRVLELVREHGQK-WSVVATRLSAEMTNKAIDTAAGAATSGSMQRKSRVGKQIRDRYLHHLDPNLKKGEWTPDEERILAREHAIHNNRWAKIAKSLLGRCDNDIKNHWHANQRRLMDRAQEQTSPPDPFSKLSSPAEA 1049
            TRWT E+  +LK LVE      ++G +DW  IA  +P +TD+QC   W  V++P L KG   WT EED+RV+ELV+++G K WSV+A  L                       K R+GKQ R+R+ +HL+P +KK  WT +E+RI+ + H    NRWA+IAK L GR DN IKNHW++  RR +    EQ       SK S PA A
Sbjct:   41 TRWTREEDEKLKKLVE------QNGTDDWKVIANYLPNRTDVQCQHRWQKVLNPELIKGP--WTKEEDQRVIELVQKYGPKRWSVIAKHL-----------------------KGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKV----EQEGYLQESSKASQPAVA 211
[Close]
BLAST of mRNA_P-fluviatile_contig1.358.1 vs. uniprot
Match: A0A2K6DQZ6_MACNE (MYB proto-oncogene, transcription factor n=6 Tax=Boreoeutheria TaxID=1437010 RepID=A0A2K6DQZ6_MACNE)

HSP 1 Score: 152 bits (385), Expect = 4.160e-37
Identity = 88/206 (42.72%), Postives = 118/206 (57.28%), Query Frame = 3 
Query:  435 TRWTAEQSLRLKTLVEGRQLVTRSGANDWTNIAKQIPAKTDLQCMLHWNHVMDPHLAKGKGSWTPEEDRRVLELVREHGQK-WSVVATRLSAEMTNKAIDTAAGAATSGSMQRKSRVGKQIRDRYLHHLDPNLKKGEWTPDEERILAREHAIHNNRWAKIAKSLLGRCDNDIKNHWHANQRRLMDRAQEQTSPPDPFSKLSSPAEA 1049
            TRWT E+  +LK LVE      ++G +DW  IA  +P +TD+QC   W  V++P L KG   WT EED+RV+ELV+++G K WSV+A  L                       K R+GKQ R+R+ +HL+P +KK  WT +E+RI+ + H    NRWA+IAK L GR DN IKNHW++  RR +    EQ       SK S PA A
Sbjct:   41 TRWTREEDEKLKKLVE------QNGTDDWKVIANYLPNRTDVQCQHRWQKVLNPELIKGP--WTKEEDQRVIELVQKYGPKRWSVIAKHL-----------------------KGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKV----EQEGYLQESSKASQPAVA 211
[Close]
BLAST of mRNA_P-fluviatile_contig1.358.1 vs. uniprot
Match: A0A2K5ZVK3_MANLE (MYB proto-oncogene, transcription factor n=8 Tax=Catarrhini TaxID=9526 RepID=A0A2K5ZVK3_MANLE)

HSP 1 Score: 152 bits (385), Expect = 4.260e-37
Identity = 88/206 (42.72%), Postives = 118/206 (57.28%), Query Frame = 3 
Query:  435 TRWTAEQSLRLKTLVEGRQLVTRSGANDWTNIAKQIPAKTDLQCMLHWNHVMDPHLAKGKGSWTPEEDRRVLELVREHGQK-WSVVATRLSAEMTNKAIDTAAGAATSGSMQRKSRVGKQIRDRYLHHLDPNLKKGEWTPDEERILAREHAIHNNRWAKIAKSLLGRCDNDIKNHWHANQRRLMDRAQEQTSPPDPFSKLSSPAEA 1049
            TRWT E+  +LK LVE      ++G +DW  IA  +P +TD+QC   W  V++P L KG   WT EED+RV+ELV+++G K WSV+A  L                       K R+GKQ R+R+ +HL+P +KK  WT +E+RI+ + H    NRWA+IAK L GR DN IKNHW++  RR +    EQ       SK S PA A
Sbjct:   42 TRWTREEDEKLKKLVE------QNGTDDWKVIANYLPNRTDVQCQHRWQKVLNPELIKGP--WTKEEDQRVIELVQKYGPKRWSVIAKHL-----------------------KGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKV----EQEGYLQESSKASQPAVA 212
[Close]
BLAST of mRNA_P-fluviatile_contig1.358.1 vs. uniprot
Match: Q708E6_HUMAN (C-myb v-myb myeloblastosis viral oncogene homologue (avian), exon 1 and joined CDS n=4 Tax=Hominidae TaxID=9604 RepID=Q708E6_HUMAN)

HSP 1 Score: 152 bits (385), Expect = 4.670e-37
Identity = 88/206 (42.72%), Postives = 118/206 (57.28%), Query Frame = 3 
Query:  435 TRWTAEQSLRLKTLVEGRQLVTRSGANDWTNIAKQIPAKTDLQCMLHWNHVMDPHLAKGKGSWTPEEDRRVLELVREHGQK-WSVVATRLSAEMTNKAIDTAAGAATSGSMQRKSRVGKQIRDRYLHHLDPNLKKGEWTPDEERILAREHAIHNNRWAKIAKSLLGRCDNDIKNHWHANQRRLMDRAQEQTSPPDPFSKLSSPAEA 1049
            TRWT E+  +LK LVE      ++G +DW  IA  +P +TD+QC   W  V++P L KG   WT EED+RV+ELV+++G K WSV+A  L                       K R+GKQ R+R+ +HL+P +KK  WT +E+RI+ + H    NRWA+IAK L GR DN IKNHW++  RR +    EQ       SK S PA A
Sbjct:   41 TRWTREEDEKLKKLVE------QNGTDDWKVIANYLPNRTDVQCQHRWQKVLNPELIKGP--WTKEEDQRVIELVQKYGPKRWSVIAKHL-----------------------KGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKV----EQEGYLQESSKASQPAVA 211
[Close]
BLAST of mRNA_P-fluviatile_contig1.358.1 vs. uniprot
Match: Q708E8_HUMAN (C-myb v-myb myeloblastosis viral oncogene homologue (avian), exon 1 and joined CDS n=10 Tax=Hominoidea TaxID=314295 RepID=Q708E8_HUMAN)

HSP 1 Score: 152 bits (385), Expect = 5.010e-37
Identity = 88/206 (42.72%), Postives = 118/206 (57.28%), Query Frame = 3 
Query:  435 TRWTAEQSLRLKTLVEGRQLVTRSGANDWTNIAKQIPAKTDLQCMLHWNHVMDPHLAKGKGSWTPEEDRRVLELVREHGQK-WSVVATRLSAEMTNKAIDTAAGAATSGSMQRKSRVGKQIRDRYLHHLDPNLKKGEWTPDEERILAREHAIHNNRWAKIAKSLLGRCDNDIKNHWHANQRRLMDRAQEQTSPPDPFSKLSSPAEA 1049
            TRWT E+  +LK LVE      ++G +DW  IA  +P +TD+QC   W  V++P L KG   WT EED+RV+ELV+++G K WSV+A  L                       K R+GKQ R+R+ +HL+P +KK  WT +E+RI+ + H    NRWA+IAK L GR DN IKNHW++  RR +    EQ       SK S PA A
Sbjct:   41 TRWTREEDEKLKKLVE------QNGTDDWKVIANYLPNRTDVQCQHRWQKVLNPELIKGP--WTKEEDQRVIELVQKYGPKRWSVIAKHL-----------------------KGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKV----EQEGYLQESSKASQPAVA 211
[Close]
BLAST of mRNA_P-fluviatile_contig1.358.1 vs. uniprot
Match: A0A8C8ZFN0_PROSS (MYB proto-oncogene, transcription factor n=2 Tax=Prolemur simus TaxID=1328070 RepID=A0A8C8ZFN0_PROSS)

HSP 1 Score: 152 bits (385), Expect = 5.490e-37
Identity = 88/206 (42.72%), Postives = 118/206 (57.28%), Query Frame = 3 
Query:  435 TRWTAEQSLRLKTLVEGRQLVTRSGANDWTNIAKQIPAKTDLQCMLHWNHVMDPHLAKGKGSWTPEEDRRVLELVREHGQK-WSVVATRLSAEMTNKAIDTAAGAATSGSMQRKSRVGKQIRDRYLHHLDPNLKKGEWTPDEERILAREHAIHNNRWAKIAKSLLGRCDNDIKNHWHANQRRLMDRAQEQTSPPDPFSKLSSPAEA 1049
            TRWT E+  +LK LVE      ++G +DW  IA  +P +TD+QC   W  V++P L KG   WT EED+RV+ELV+++G K WSV+A  L                       K R+GKQ R+R+ +HL+P +KK  WT +E+RI+ + H    NRWA+IAK L GR DN IKNHW++  RR +    EQ       SK S PA A
Sbjct:   41 TRWTREEDEKLKKLVE------QNGTDDWKVIANYLPNRTDVQCQHRWQKVLNPELIKGP--WTKEEDQRVIELVQKYGPKRWSVIAKHL-----------------------KGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKV----EQEGYLQESSKASQPAVA 211
[Close]
BLAST of mRNA_P-fluviatile_contig1.358.1 vs. uniprot
Match: A0A8C6QKM1_NANGA (Myeloblastosis oncogene n=1 Tax=Nannospalax galili TaxID=1026970 RepID=A0A8C6QKM1_NANGA)

HSP 1 Score: 155 bits (391), Expect = 5.570e-37
Identity = 90/213 (42.25%), Postives = 121/213 (56.81%), Query Frame = 3 
Query:  435 TRWTAEQSLRLKTLVEGRQLVTRSGANDWTNIAKQIPAKTDLQCMLHWNHVMDPHLAKGKGSWTPEEDRRVLELVREHGQK-WSVVATRLSAEMTNKAIDTAAGAATSGSMQRKSRVGKQIRDRYLHHLDPNLKKGEWTPDEERILAREHAIHNNRWAKIAKSLLGRCDNDIKNHWHANQRRLMDRAQEQTSPPDPFSKLSSPAEAPPLPHHN 1070
            TRWT E+  +LK LVE      ++G +DW  IA  +P +TD+QC   W  V++P L KG   WT EED+RV+ELV+++G K WSV+A  L                       K R+GKQ R+R+ +HL+P +KK  WT +E+RI+ + H    NRWA+IAK L GR DN IKNHW++  RR +    EQ       SK S PA AP    +N
Sbjct:   37 TRWTREEDEKLKKLVE------QNGTDDWKVIANYLPNRTDVQCQHRWQKVLNPELIKGP--WTKEEDQRVIELVQKYGPKRWSVIAKHL-----------------------KGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKV----EQEGYLQESSKASQPAVAPSFQKNN 214
[Close]
BLAST of mRNA_P-fluviatile_contig1.358.1 vs. uniprot
Match: A0A2J8PSX2_PANTR (MYB isoform 14 n=1 Tax=Pan troglodytes TaxID=9598 RepID=A0A2J8PSX2_PANTR)

HSP 1 Score: 153 bits (386), Expect = 6.290e-37
Identity = 88/206 (42.72%), Postives = 118/206 (57.28%), Query Frame = 3 
Query:  435 TRWTAEQSLRLKTLVEGRQLVTRSGANDWTNIAKQIPAKTDLQCMLHWNHVMDPHLAKGKGSWTPEEDRRVLELVREHGQK-WSVVATRLSAEMTNKAIDTAAGAATSGSMQRKSRVGKQIRDRYLHHLDPNLKKGEWTPDEERILAREHAIHNNRWAKIAKSLLGRCDNDIKNHWHANQRRLMDRAQEQTSPPDPFSKLSSPAEA 1049
            TRWT E+  +LK LVE      ++G +DW  IA  +P +TD+QC   W  V++P L KG   WT EED+RV+ELV+++G K WSV+A  L                       K R+GKQ R+R+ +HL+P +KK  WT +E+RI+ + H    NRWA+IAK L GR DN IKNHW++  RR +    EQ       SK S PA A
Sbjct:   41 TRWTREEDEKLKKLVE------QNGTDDWKVIANYLPNRTDVQCQHRWQKVLNPELIKGP--WTKEEDQRVIELVQKYGPKRWSVIAKHL-----------------------KGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKV----EQEGYLQESSKASQPAAA 211
[Close]
BLAST of mRNA_P-fluviatile_contig1.358.1 vs. uniprot
Match: A0A2K6U084_SAIBB (MYB proto-oncogene, transcription factor n=4 Tax=Platyrrhini TaxID=9479 RepID=A0A2K6U084_SAIBB)

HSP 1 Score: 152 bits (383), Expect = 7.540e-37
Identity = 88/206 (42.72%), Postives = 118/206 (57.28%), Query Frame = 3 
Query:  435 TRWTAEQSLRLKTLVEGRQLVTRSGANDWTNIAKQIPAKTDLQCMLHWNHVMDPHLAKGKGSWTPEEDRRVLELVREHGQK-WSVVATRLSAEMTNKAIDTAAGAATSGSMQRKSRVGKQIRDRYLHHLDPNLKKGEWTPDEERILAREHAIHNNRWAKIAKSLLGRCDNDIKNHWHANQRRLMDRAQEQTSPPDPFSKLSSPAEA 1049
            TRWT E+  +LK LVE      ++G +DW  IA  +P +TD+QC   W  V++P L KG   WT EED+RV+ELV+++G K WSV+A  L                       K R+GKQ R+R+ +HL+P +KK  WT +E+RI+ + H    NRWA+IAK L GR DN IKNHW++  RR +    EQ       SK S PA A
Sbjct:   39 TRWTREEDEKLKKLVE------QNGTDDWKVIANFLPNRTDVQCQHRWQKVLNPELIKGP--WTKEEDQRVIELVQKYGPKRWSVIAKHL-----------------------KGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKV----EQEGYLQDSSKASQPAVA 209
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.358.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7C1_ECTSI6.000e-6261.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
P10242-122.650e-3742.72Isoform 12 of Transcriptional activator Myb n=7 Ta... [more]
A0A2K6DQZ6_MACNE4.160e-3742.72MYB proto-oncogene, transcription factor n=6 Tax=B... [more]
A0A2K5ZVK3_MANLE4.260e-3742.72MYB proto-oncogene, transcription factor n=8 Tax=C... [more]
Q708E6_HUMAN4.670e-3742.72C-myb v-myb myeloblastosis viral oncogene homologu... [more]
Q708E8_HUMAN5.010e-3742.72C-myb v-myb myeloblastosis viral oncogene homologu... [more]
A0A8C8ZFN0_PROSS5.490e-3742.72MYB proto-oncogene, transcription factor n=2 Tax=P... [more]
A0A8C6QKM1_NANGA5.570e-3742.25Myeloblastosis oncogene n=1 Tax=Nannospalax galili... [more]
A0A2J8PSX2_PANTR6.290e-3742.72MYB isoform 14 n=1 Tax=Pan troglodytes TaxID=9598 ... [more]
A0A2K6U084_SAIBB7.540e-3742.72MYB proto-oncogene, transcription factor n=4 Tax=P... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:4234498..4240055 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score240.4
Seed ortholog evalue1.9e-60
Seed eggNOG ortholog2880.D7G7C1
KEGG koko:K09422
EggNOG free text desc.RNA polymerase II transcription regulator recruiting activity
EggNOG OGsCOG5147@1,KOG0048@2759
COG Functional cat.ADK
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03000
Hectar predicted targeting categoryother localisation
Exons6
Model size2421
Cds size1548
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.358.1prot_P-fluviatile_contig1.358.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig1 4235142..4239391 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815266.7393966-UTR-P-fluviatile_contig1:4234497..42346641622815266.7393966-UTR-P-fluviatile_contig1:4234497..4234664Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 4234498..4234664 +
1693561306.1063342-UTR-P-fluviatile_contig1:4234497..42346641693561306.1063342-UTR-P-fluviatile_contig1:4234497..4234664Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 4234498..4234664 +
1622815266.7506154-UTR-P-fluviatile_contig1:4235099..42351411622815266.7506154-UTR-P-fluviatile_contig1:4235099..4235141Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 4235100..4235141 +
1693561306.122906-UTR-P-fluviatile_contig1:4235099..42351411693561306.122906-UTR-P-fluviatile_contig1:4235099..4235141Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 4235100..4235141 +
1622815266.8328533-UTR-P-fluviatile_contig1:4239391..42400551622815266.8328533-UTR-P-fluviatile_contig1:4239391..4240055Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 4239392..4240055 +
1693561306.7865133-UTR-P-fluviatile_contig1:4239391..42400551693561306.7865133-UTR-P-fluviatile_contig1:4239391..4240055Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 4239392..4240055 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815266.761536-CDS-P-fluviatile_contig1:4235141..42354711622815266.761536-CDS-P-fluviatile_contig1:4235141..4235471Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4235142..4235471 +
1693561306.5571048-CDS-P-fluviatile_contig1:4235141..42354711693561306.5571048-CDS-P-fluviatile_contig1:4235141..4235471Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4235142..4235471 +
1622815266.774097-CDS-P-fluviatile_contig1:4235804..42359181622815266.774097-CDS-P-fluviatile_contig1:4235804..4235918Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4235805..4235918 +
1693561306.5746176-CDS-P-fluviatile_contig1:4235804..42359181693561306.5746176-CDS-P-fluviatile_contig1:4235804..4235918Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4235805..4235918 +
1622815266.785647-CDS-P-fluviatile_contig1:4236222..42364261622815266.785647-CDS-P-fluviatile_contig1:4236222..4236426Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4236223..4236426 +
1693561306.5849626-CDS-P-fluviatile_contig1:4236222..42364261693561306.5849626-CDS-P-fluviatile_contig1:4236222..4236426Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4236223..4236426 +
1622815266.8034265-CDS-P-fluviatile_contig1:4237574..42376751622815266.8034265-CDS-P-fluviatile_contig1:4237574..4237675Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4237575..4237675 +
1693561306.5958788-CDS-P-fluviatile_contig1:4237574..42376751693561306.5958788-CDS-P-fluviatile_contig1:4237574..4237675Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4237575..4237675 +
1622815266.8180492-CDS-P-fluviatile_contig1:4238592..42393911622815266.8180492-CDS-P-fluviatile_contig1:4238592..4239391Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4238593..4239391 +
1693561306.7683406-CDS-P-fluviatile_contig1:4238592..42393911693561306.7683406-CDS-P-fluviatile_contig1:4238592..4239391Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4238593..4239391 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig1.358.1

>prot_P-fluviatile_contig1.358.1 ID=prot_P-fluviatile_contig1.358.1|Name=mRNA_P-fluviatile_contig1.358.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=516bp
MVPAPQTSGGDGAVGVGDASAGGPGVGDRAGDAASGDDGGGDRRRREGAV
AGARDKEPSPEERRPPPPAPAPAPPTRWTAEQSLRLKTLVEGRQLVTRSG
ANDWTNIAKQIPAKTDLQCMLHWNHVMDPHLAKGKGSWTPEEDRRVLELV
REHGQKWSVVATRLSAEMTNKAIDTAAGAATSGSMQRKSRVGKQIRDRYL
HHLDPNLKKGEWTPDEERILAREHAIHNNRWAKIAKSLLGRCDNDIKNHW
HANQRRLMDRAQEQTSPPDPFSKLSSPAEAPPLPHHNHQQEQERQQGQER
QRQPTGVELGTGDHQNCLGRGMDVLGSLFQQNAEDHEPRRRSNSGGGKRE
DIGDRSDVTTMMMTSAPLPAAAASAVAAEAGTVAEAARATAGEELELRAT
AGEELELADAFPLPVAKRRRTGGAGDCEGGANIGVGIGGVELVGSESGVE
EAAGRFDDGVIGVGVVDHFGPADLGGGGGGGSDGGGPVEGAADSEFQSLA
QEGEEVASGGRPHWW*
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mRNA from alignment at P-fluviatile_contig1:4234498..4240055+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig1.358.1 ID=mRNA_P-fluviatile_contig1.358.1|Name=mRNA_P-fluviatile_contig1.358.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5558bp|location=Sequence derived from alignment at P-fluviatile_contig1:4234498..4240055+ (Porterinema fluviatile SAG_2381)
CGGCGGCGGAGGCGATTCTGAGAGAGCAAGTTGTGTTTCCGCTTGGGCCC
GCTCCGCCGCCGCTGCAGCAGCAGCAGCAGGAGATCGGGCAGAAGAACTG
CGGTGCCCCCGCCGCCGTTGCCGAAAACAGCCCTGATGCTTTCGGCGCCG
CAGCTGGAGCCAATCTGGTGAGTCTCCATCTCGGTAAGCCGGGCGTACGA
GGAGGGGAGAGGGTACGGTCGAGGCAGAGAGGGCGGGGCGTGGTCGGCGT
GTTTGCTGGCTTGCTGACACCCTGTCTGATGTACCCACGTGGTGCGCGTG
CGAAAGCGGTTCGGGGGGCGCCTGAAGGACGTGGTGCAGTCAGGAGTCGC
GTATCCGCGTGAAAATTCGAGTAAGAATCCTAGCAGTGTCTCCAGACTCT
GACGCCCATGCTACGGAGAGAAGAAGGAGCTGTTATTTTCTCCGCCCTCT
CCCTCCCCCCTCTCTCCCCCGCCCCTCCACGCCCCCACGCCCGGCTCCGT
CTCAACGGTGGTACGTGTGGTAAATGGTGGTGGGGAGGACCTGAGTCAGG
CAACGTAGAAGTATGACTCCCCGCGCCCGTGCTCGCTACTTCTGCCCCCC
AGTTTCTAGCCACCGCCTCGCCCGAACAAGCACCGTCCGCTTTGATGGTG
CCCGCACCGCAAACCTCGGGAGGAGATGGGGCTGTCGGTGTCGGTGATGC
TAGCGCCGGCGGTCCCGGTGTTGGCGATCGAGCGGGTGATGCTGCTAGCG
GTGACGATGGTGGTGGTGACCGCCGGCGGCGAGAGGGCGCCGTTGCGGGC
GCACGCGACAAGGAACCGTCGCCAGAGGAGCGTAGACCTCCTCCGCCAGC
GCCGGCGCCGGCGCCTCCGACGCGCTGGACAGCGGAGCAGAGCTTGCGTC
TAAAAACCCTCGTGGAAGGGAGGCAGCTCGTGACCAGGTCGGGTGCCAAC
GACTGGACCAACATCGCCAAGCAAGTGAGTCGGGAAGGGGCGAGGCGGAC
GGGAGGTCTGGCGTGGGGGATATGAGGCGGCTTGCTCACCCCGCTGACCC
CCGTCATGCCGAAAATGCGACGGACACTTTAGGTACATCCTTGACCACCT
CCCATGAAAACAACGTACTTGTGCCGCTTCTGCTGTTTTTTTGTGTCGGT
GAAGAACGAAGCTTACACAACCAAATCCGAAAACAACGCAAACGCTGCGT
GCTTCCGTGTTGGACGTTAATGACGGTGTTGTCTAGCCTCCGTTCCGCCC
CCAACTCCGGGCTGCTGCTGCTGCTGCTGCTGCTGTTGCTTCGTTAACAC
GAAGCAGATTCCCGCAAAGACGGATCTGCAGTGCATGCTCCACTGGAACC
ACGTGATGGACCCGCACCTGGCTAAAGGCAAAGGCTCGTGGACTCCGGAG
GAGGATCGACGCGTTCTTGAGGTTTGACATTGCTGTACTTAAGAGCTGTG
GCCAAATCTTAATTTTCGCCGTTGCGAGATAACAGGCATTTTCCGCGTCA
CAACCTGTCTTCATGTGCCCCGTCCTCCTTTCTCTTCTGGTGGTGACGTC
TGCGGGTAAAGGATTTGGATCCAAATGTGTCACGATGCAGACGTGAAAGC
ACATGTTTGCCTCATCTCGTGTTTTTCTCACGTCCTCTCACGTCTGTCGC
TTACCTTCTCTTCTCGCGGTCCCACTTGTACCATTCACGGAACGTACGAA
AAAATAACCGTGTGCACGCCTGCAGCTGGTGCGCGAACACGGCCAGAAGT
GGAGCGTGGTCGCGACGAGGCTGAGCGCCGAGATGACGAACAAGGCCATC
GACACCGCAGCCGGCGCCGCTACGAGCGGGTCGATGCAGAGGAAGTCTCG
CGTCGGCAAGCAGATCCGCGACCGTTACCTCCACCACCTCGACCCCAACC
TCAAGAAGGGGGAGTGGACGCCGGACGAGGTGTGTGGGTAGGGGGGAGGA
GACTCCCCTTCTCCTTGCTGTTCCGCACTGTTCGTTTTTGGTGTCGACAG
TCCCTTATTGACAGTCCCTTGTTGACAGTCTCTCCAAAGGAAGACGGGGT
GCTGCGGTACTGTGGAGTTTTTCCTGGGCGGTGTAGGCCGCGGCGTGGGT
GCGTGCGTACGTATGCCTGTGCACGGCTTCCGGACAAAACACATATCACG
TTTATCTTTCTCGTCGATTGGATGCTTTTTCTTTTTTGACTGATCCCGTA
AATTTCTCATCCATTGGATGTCGTTGGCAGTTCATCTGCAGCCTCGTCGT
CCCCGTCCTCCTCCTTGCCTTCCTCTTCGCGATGTCGGGGTTTGTGTTTT
TTTTTTGTGTGCCGTCGCCGGTTGTTGTTGATGACTTTTTCTCACGTTGT
AGTCGTTTCAAAAACTGTAAGTGCTCCGTGGATGAAATCAGCTGCTTGCG
CTCAGCTCACAAAACTATTGATTGTACCTGGTTTTGGTTCGGCAATGCCT
ATCTCACCGCTCGTGGTCCACGCGTATCTTTCCTGAAGTTCCGTGTTTCA
AGCCCTCGTAATTGGGTTCGTGGGGGCGGAAAGTTCCCGCGGTGAAGCGC
CGGGTCAGTCTGGTTTCGTCGCATTGCTCTGATTTATTTCTGTTTCTTGG
GCGATCCACGTCTTGTTTACGCGAGTATCGATTCAACCACGTGAAATGCA
CCCGAAGGGGCGAAAAGTGCCTGGTGAGAAGGGCCGTGTGACTACGGTAT
CGCGATCCTGTACCTTTCTGGGAAGGTCGGGCGATCGCGTGTCTCGCTGG
AGCGAGCTCGCCGAGGAAAAAGTAGCCCAGAATCAACCCCCCTGTCGCGG
AGGCACAATACAACTATTATCTTTGTGCTCATACGAATCACATTCATTTG
CTTGGCTTGAAAATCAACTTTTCAAGCATGAAACTTTGGTGTTTCGTGCG
CCAATTGTCAGTGGATCCGAGAATCGGGATGAAAGGGACACCAAAGTATG
TACAGGGACGTGTTTTCTTTACGTGAAGGCAATAGTCGCAGATTATTTCG
ACACCTCCATCACCAAAGCCACCAATGGCAATAAAAGCCACAACAACAAT
TTCAAGCACCACCATGCTCATCCACAGGAGCGCATCCTTGCTCGGGAGCA
CGCGATCCACAACAACAGATGGGCGAAGATCGCAAAGTCCCTTCTGGGCC
GCTGCGACAACGACATCAAGAACCATTGGTGAGAGCGAGGGAGGGCCGGG
GCGAAATGCTTGAGGAGGGGCAGAGAGAGAAAGAAAGTGAGAGAGAGTAC
GCAATGCTCGTGACCATCGCCGTACGGCCTTGGCAAAGATCCCTCACCCG
CGTACCCGCTTCCCGCCCGTGCAGACAGCACGGCACAGCTCAGCAGTCCG
CATCCCCTTTACATTGTGAACGCTTTGCGTGTACCATGTTGCAGACACAT
CATAAGGACAAATATCAGCAGTCGGTGTGCAAAAGTGTCATCTTCCGCCC
ACTCGGCTGCCGTTTTCTTTTCTGCTCTCTCTCGCCGGCTTTGTCGAGCG
GGGCAGCTGGTCTGGTCAGCCCGCACGAGCCCGCGGTAGCGAGCTCCTTA
TTCTCTCGAACATTCTCGGACGCTCTGATACGTTCTTGCGCCGGTCGCAC
TGCACCAATATCTGGCCGCCGACGAGCGCAGACGCCTCTCGACCGCCGCC
GTTGTCACAATCTCAAACGAAAGCGAGAAAGATTTGAAGGGAGGGTCGAG
CGAGATTTGCGAGGGAGGGTCGAGAAAGATTTGAAGGGAGGGTCGACAAA
GATTTGCGAGGGAGGGTCGAGAGAGATTTGAAGGGAGGGTCGAGAGAGAT
TTGCGAGGGAGGGTCGAGAAAGATTCGAAGGGAGGGTCGAGAGAGATTTG
AAGGGAGGGTCGAGAGAGATTTGAAGGGGGGGTCGAGAGAGATTTGAAGG
GGGGTCGAGAGAGATTTGAAGGGGGGTCGAGAGAGATTTGAAGGGGGTCG
ACCACCGACAAGAAAATCGAAACGGAGTACCGTCGAGCCCTTTGATGCCC
CCCGCCGATATTCACCCGCCCCTGTCCCCACCTGAATGACGCACCCCGCT
GCGCCGCGCCTCCCGCGCTGGTTTTCCTCCTTTTCCTGTTGGAAGGCACG
CGAACCAGCGCCGGCTGATGGACCGCGCGCAGGAGCAGACGTCACCGCCC
GATCCCTTCTCCAAGCTCTCATCCCCTGCCGAAGCTCCGCCTCTACCCCA
CCACAACCACCAGCAGGAGCAGGAGCGGCAGCAGGGGCAGGAGCGGCAGC
GGCAGCCAACTGGAGTGGAATTAGGAACGGGGGATCATCAGAACTGCTTA
GGCCGCGGAATGGATGTGCTCGGCTCGCTCTTTCAACAGAACGCGGAAGA
TCACGAACCCCGCCGCAGGAGCAACAGCGGCGGCGGCAAAAGGGAAGACA
TCGGTGATCGCAGCGACGTGACGACGATGATGATGACATCAGCTCCGCTA
CCGGCGGCCGCGGCGTCAGCGGTAGCGGCAGAGGCTGGGACGGTGGCAGA
GGCGGCGAGAGCTACGGCTGGCGAAGAGTTGGAGCTGAGAGCTACGGCGG
GCGAAGAGTTGGAGCTGGCGGACGCGTTCCCACTTCCGGTCGCCAAGCGC
CGCCGGACAGGCGGTGCAGGAGATTGCGAAGGGGGTGCCAATATTGGCGT
TGGCATTGGCGGCGTCGAGCTTGTTGGGAGCGAGAGCGGTGTTGAGGAGG
CTGCCGGCCGATTCGACGATGGCGTAATCGGCGTAGGGGTCGTCGACCAC
TTCGGGCCGGCCGACTTGGGCGGCGGCGGCGGCGGCGGCAGCGACGGCGG
CGGGCCGGTGGAGGGCGCTGCTGACAGCGAGTTTCAGAGTCTCGCACAAG
AAGGCGAGGAAGTAGCGTCAGGAGGGAGGCCCCATTGGTGGTGATGGCGG
CGAGGTGGAGTTTTCTCGCGACGTGCCGAGTTGGAAATAGCACCCCTTTC
GAATGATTCGGTTCATGAAGATAGCAATTCCGATTATTGCGGGAACAGCG
CGGATCAATTCTTATGTCTGCGGATGGGGGCAGACCCCCGCAGCGACCGA
CGCGCAATGCTCACCGCGCTGAAAGTATGGATGTGCGCGTCTTTTGTCTG
ATCACGGACTGCCTGGTGACGGTGCAGCTCGAATTGGTTGTACTTTATCT
TGATGGAGGGCATGCGTGACGATGGAAGAGGGGTACATTGGTAGTAAACG
CCCCATGTAAATATATCGTTCTGTTGAGTCAAACAACCTGCCTCCAATCC
TGGTCTCATTTTTGAAACGACGACGGTGTAATGCCTCTCGGGCGGCGTGG
GAGGCAGGGAGAGTCCACAGGGCTGCTTCCGATCCGTCGTCGCCTCTTTG
CTGACGCCGGTGATAATTGTTTGTGATGAGATGGTGCTGTCTGCCCCCGC
GAGACTCCCGGCGCCGTCGGATTCCAGAAAGCCAGCATTTAACGGGCACG
CGCCGGTTGGATCTGTCTACCCGATATGCGTGCAGGAAGCATTCCTTCCT
GTGGACCGAATACTTCAAGTAGCAGAAACCCGTCCTGTGAGACTAGGCAA
AGATGTAG
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Coding sequence (CDS) from alignment at P-fluviatile_contig1:4234498..4240055+

>mRNA_P-fluviatile_contig1.358.1 ID=mRNA_P-fluviatile_contig1.358.1|Name=mRNA_P-fluviatile_contig1.358.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3096bp|location=Sequence derived from alignment at P-fluviatile_contig1:4234498..4240055+ (Porterinema fluviatile SAG_2381)
ATGGTGCCCGCACCGCAAACCTCGGGAGGAGATGGGGCTGTCGGTGTCGG
TGATGCTAGCGCCGGCGGTCCCGGTGTTGGCGATCGAGCGGGTGATGCTG
CTAGCGGTGACGATGGTGGTGGTGACCGCCGGCGGCGAGAGGGCGCCGTT
GCGGGCGCACGCGACAAGGAACCGTCGCCAGAGGAGCGTAGACCTCCTCC
GCCAGCGCCGGCGCCGGCGCCTCCGACGCGCTGGACAGCGGAGCAGAGCT
TGCGTCTAAAAACCCTCGTGGAAGGGAGGCAGCTCGTGACCAGGTCGGGT
GCCAACGACTGGACCAACATCGCCAAGCAAATGGTGCCCGCACCGCAAAC
CTCGGGAGGAGATGGGGCTGTCGGTGTCGGTGATGCTAGCGCCGGCGGTC
CCGGTGTTGGCGATCGAGCGGGTGATGCTGCTAGCGGTGACGATGGTGGT
GGTGACCGCCGGCGGCGAGAGGGCGCCGTTGCGGGCGCACGCGACAAGGA
ACCGTCGCCAGAGGAGCGTAGACCTCCTCCGCCAGCGCCGGCGCCGGCGC
CTCCGACGCGCTGGACAGCGGAGCAGAGCTTGCGTCTAAAAACCCTCGTG
GAAGGGAGGCAGCTCGTGACCAGGTCGGGTGCCAACGACTGGACCAACAT
CGCCAAGCAAATTCCCGCAAAGACGGATCTGCAGTGCATGCTCCACTGGA
ACCACGTGATGGACCCGCACCTGGCTAAAGGCAAAGGCTCGTGGACTCCG
GAGGAGGATCGACGCGTTCTTGAGATTCCCGCAAAGACGGATCTGCAGTG
CATGCTCCACTGGAACCACGTGATGGACCCGCACCTGGCTAAAGGCAAAG
GCTCGTGGACTCCGGAGGAGGATCGACGCGTTCTTGAGCTGGTGCGCGAA
CACGGCCAGAAGTGGAGCGTGGTCGCGACGAGGCTGAGCGCCGAGATGAC
GAACAAGGCCATCGACACCGCAGCCGGCGCCGCTACGAGCGGGTCGATGC
AGAGGAAGTCTCGCGTCGGCAAGCAGATCCGCGACCGTTACCTCCACCAC
CTCGACCCCAACCTCAAGAAGGGGGAGTGGACGCCGGACGAGCTGGTGCG
CGAACACGGCCAGAAGTGGAGCGTGGTCGCGACGAGGCTGAGCGCCGAGA
TGACGAACAAGGCCATCGACACCGCAGCCGGCGCCGCTACGAGCGGGTCG
ATGCAGAGGAAGTCTCGCGTCGGCAAGCAGATCCGCGACCGTTACCTCCA
CCACCTCGACCCCAACCTCAAGAAGGGGGAGTGGACGCCGGACGAGGAGC
GCATCCTTGCTCGGGAGCACGCGATCCACAACAACAGATGGGCGAAGATC
GCAAAGTCCCTTCTGGGCCGCTGCGACAACGACATCAAGAACCATTGGAG
CGCATCCTTGCTCGGGAGCACGCGATCCACAACAACAGATGGGCGAAGAT
CGCAAAGTCCCTTCTGGGCCGCTGCGACAACGACATCAAGAACCATTGGC
ACGCGAACCAGCGCCGGCTGATGGACCGCGCGCAGGAGCAGACGTCACCG
CCCGATCCCTTCTCCAAGCTCTCATCCCCTGCCGAAGCTCCGCCTCTACC
CCACCACAACCACCAGCAGGAGCAGGAGCGGCAGCAGGGGCAGGAGCGGC
AGCGGCAGCCAACTGGAGTGGAATTAGGAACGGGGGATCATCAGAACTGC
TTAGGCCGCGGAATGGATGTGCTCGGCTCGCTCTTTCAACAGAACGCGGA
AGATCACGAACCCCGCCGCAGGAGCAACAGCGGCGGCGGCAAAAGGGAAG
ACATCGGTGATCGCAGCGACGTGACGACGATGATGATGACATCAGCTCCG
CTACCGGCGGCCGCGGCGTCAGCGGTAGCGGCAGAGGCTGGGACGGTGGC
AGAGGCGGCGAGAGCTACGGCTGGCGAAGAGTTGGAGCTGAGAGCTACGG
CGGGCGAAGAGTTGGAGCTGGCGGACGCGTTCCCACTTCCGGTCGCCAAG
CGCCGCCGGACAGGCGGTGCAGGAGATTGCGAAGGGGGTGCCAATATTGG
CGTTGGCATTGGCGGCGTCGAGCTTGTTGGGAGCGAGAGCGGTGTTGAGG
AGGCTGCCGGCCGATTCGACGATGGCGTAATCGGCGTAGGGGTCGTCGAC
CACTTCGGGCCGGCCGACTTGGGCGGCGGCGGCGGCGGCGGCAGCGACGG
CGGCGGGCCGGTGGAGGGCGCTGCTGACAGCGAGTTTCAGAGTCTCGCAC
AAGAAGGCGAGGAAGTAGCGTCAGGAGGGAGGCCCCATTGGTGGTGAGCA
CGCGAACCAGCGCCGGCTGATGGACCGCGCGCAGGAGCAGACGTCACCGC
CCGATCCCTTCTCCAAGCTCTCATCCCCTGCCGAAGCTCCGCCTCTACCC
CACCACAACCACCAGCAGGAGCAGGAGCGGCAGCAGGGGCAGGAGCGGCA
GCGGCAGCCAACTGGAGTGGAATTAGGAACGGGGGATCATCAGAACTGCT
TAGGCCGCGGAATGGATGTGCTCGGCTCGCTCTTTCAACAGAACGCGGAA
GATCACGAACCCCGCCGCAGGAGCAACAGCGGCGGCGGCAAAAGGGAAGA
CATCGGTGATCGCAGCGACGTGACGACGATGATGATGACATCAGCTCCGC
TACCGGCGGCCGCGGCGTCAGCGGTAGCGGCAGAGGCTGGGACGGTGGCA
GAGGCGGCGAGAGCTACGGCTGGCGAAGAGTTGGAGCTGAGAGCTACGGC
GGGCGAAGAGTTGGAGCTGGCGGACGCGTTCCCACTTCCGGTCGCCAAGC
GCCGCCGGACAGGCGGTGCAGGAGATTGCGAAGGGGGTGCCAATATTGGC
GTTGGCATTGGCGGCGTCGAGCTTGTTGGGAGCGAGAGCGGTGTTGAGGA
GGCTGCCGGCCGATTCGACGATGGCGTAATCGGCGTAGGGGTCGTCGACC
ACTTCGGGCCGGCCGACTTGGGCGGCGGCGGCGGCGGCGGCAGCGACGGC
GGCGGGCCGGTGGAGGGCGCTGCTGACAGCGAGTTTCAGAGTCTCGCACA
AGAAGGCGAGGAAGTAGCGTCAGGAGGGAGGCCCCATTGGTGGTGA
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