mRNA_P-fluviatile_contig1.353.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig1.353.1 vs. uniprot
Match: A0A6H5K807_9PHAE (Cyclic nucleotide-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K807_9PHAE) HSP 1 Score: 633 bits (1632), Expect = 2.100e-218 Identity = 375/677 (55.39%), Postives = 434/677 (64.11%), Query Frame = 1
Query: 64 MWKNFSAHHIQRGDVTAVVWGAPGAAPEDEGGARETPVRPSAPAAGTADAEELTRGRRAGNPFVQQCDFIFPLPERDSV-------DADE------EAESQARAFVVRSLGTVFYYRARGSLSALLEEPFLGSYILRGGFSALALNAPSDQGNSFAILPNGVLLLSLDRESFQT------LGLPGEAAPTRPKGKAKRAGAGAGSTGGSAGVLGGGAGGPDRYVSAIDLSTKAFRRGKPLHDRVISCLGGGSRAGGGGGDGFVEMLVCSWEEPSRGGSRRIEEGGVATANLKKSGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQEQCCREVNFPPGFSTKKVEISPDIRFFTQACCPDLDLVGHGFASTATFVTPIETPPLRKEEGGGVLIDGATVPSDGFRENTGDVDSENNDFVDAANDASSDHR--SGQLARIPPAVLSPPGSTKCRLVLDMFEWLGAVSCGLDAVVRRQPSPPEPFLSEFETPRHLRYRRNRVVCRARLRGFLPPLAVARFVKAAGSAASSAMTAEESGEAKGGLGPQYYSS---LPADHACCRQDRQRRHDGSAWGSVTAWPFRDAPRGYPGAYAPCAGGQTSKRGGRGRGGKVRGRDGAVKKGAAQRSTREWPVGGHGCYTVVACPGETAVAYVSARCPGPGW 2022
MW++FSAH+ QRGDVTAVVWGAPGA P G VRPS+ AAG DAE LTRGRRA PF+QQCD +FPLP++D D E E E +A+AFVVR+LG FYYRARG LS LL E FL SY+L+GGFSALALNAPSD GNSFAILP GVL+LSLDRESFQ + LPGEAA TRP GK KRAGAGAGSTGGS GVLGG AGGPDRYVSA+DLS K+FR GKPLHDRV+SCL S G G DG +V W G E G +A A + SG + +QCCR++ FPPGFS ++V+++PDIRFF +ACCPDLD VG G A+TA T ++ + +G I+ S EN VD ++D SD + R+PP V S P S KC LVLDMFEWLGAVSCGLDA VRR PSPPEP+LS+FETPRHLRYRR+RVVCRARLRGFLPP+AV+RFV AAGSAA+ + A S E G Q+Y S LP R Q+R DG +WG+VT+WPFRDAPR YPGA APCAGGQ SKRG R +GR G G+ +R +EWPVGGHG YTVVACPGETAVA+VSA+CPGPGW
Sbjct: 1 MWQDFSAHNTQRGDVTAVVWGAPGARPAT--GESTATVRPSS-AAGAVDAEALTRGRRADTPFIQQCDLVFPLPDQDGESDGHDHGDTQERQQKRLEMEERAKAFVVRALGKTFYYRARGPLSVLLRERFLDSYVLKGGFSALALNAPSDHGNSFAILPGGVLVLSLDRESFQASISGFRICLPGEAAATRPNGKGKRAGAGAGSTGGSVGVLGGSAGGPDRYVSAVDLSAKSFRPGKPLHDRVLSCLS--SCRWGSGDDGAAVDMVVHWCGSGGVGQGSGEGGELAEA--ESSGTSEASGQAPEGCGQGAAAVGRRPKGECAEGKQEGQ----------QSQQCCRDITFPPGFSAERVDLTPDIRFFREACCPDLDFVGQGLAATAP--TTVQRARRKGRKG----IEATAFNSTSTAEN----------LVDGSDDGGSDDHFTDRRHPRLPPPVASQPESAKCLLVLDMFEWLGAVSCGLDAAVRRSPSPPEPYLSKFETPRHLRYRRDRVVCRARLRGFLPPVAVSRFVDAAGSAAAG-VAALASAEDSAADGRQHYESPQLLPVRRVV-RDQGQQRPDGCSWGAVTSWPFRDAPRAYPGADAPCAGGQRSKRGAR------KGRGGG---GSEERCAKEWPVGGHGVYTVVACPGETAVAFVSAKCPGPGW 633
BLAST of mRNA_P-fluviatile_contig1.353.1 vs. uniprot
Match: A0A835ZFG0_9STRA (Ribonuclease P n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFG0_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 3.210e-12 Identity = 49/119 (41.18%), Postives = 64/119 (53.78%), Query Frame = 1
Query: 475 QGNSFAILPNGVLLLSLDRESFQTLGLPGEAAPTRPKGKAKRAGAGAGSTGGSAGVLGGGAGGPDRYVSAIDLSTKAFRRGKPLHDRVISCLGGGSRA------GGGGGDGFVEMLVCS 813
+G +FA+LP G L+ SLDRE+FQTLGLP +A RP ++R G P RY + DL +K+FR GKPLHDR++ CL G+RA GGG F L +
Sbjct: 18 RGATFAVLPGGKLVYSLDREAFQTLGLPAKA--VRPASTSRRPGGDK----------------PRRYFGSADLHSKSFRPGKPLHDRLVQCLAKGARAETMLVWDGGGAGAFPASLAAT 118
BLAST of mRNA_P-fluviatile_contig1.353.1 vs. uniprot
Match: A0A8C4PW73_EPTBU (Ribonuclease P/MRP 40 subunit n=2 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4PW73_EPTBU) HSP 1 Score: 73.9 bits (180), Expect = 2.050e-10 Identity = 49/130 (37.69%), Postives = 69/130 (53.08%), Query Frame = 1
Query: 367 YYRARG-SLSALLEEPFLGSYILRGGFSALALNAPSDQGNSFAILPNGVLLLSLDRESFQTLGLPGEAAPTRPKGKAKRAGAGAGSTGGSAGVLGGGAGGPDRYVSAIDLSTKAFRRGKPLHDRVISCLG 753
YY RG L+ALL+E F+ ++ RG AL+ + DQ +SFA+LP G LLLSL +++++TLGL G +P A R P YV IDL++ F+ GK ++RVI LG
Sbjct: 63 YYLVRGLPLTALLQEDFIERFVRRGSVCALSYDTRIDQDDSFALLPPGSLLLSLQKDTYETLGLQG-----KPSVYAGRK--------------------PLHYVVNIDLTSPTFKSGKKNYERVIWALG 167
BLAST of mRNA_P-fluviatile_contig1.353.1 vs. uniprot
Match: A0A0L0HUD1_SPIPD (Uncharacterized protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HUD1_SPIPD) HSP 1 Score: 72.4 bits (176), Expect = 6.930e-10 Identity = 42/129 (32.56%), Postives = 68/129 (52.71%), Query Frame = 1
Query: 364 FYYRARGSLSALLEEPFLGSYILRGGFSALALNAPSDQGNSFAILPNGVLLLSLDRESFQTLGLPGEAAPTRPKGKAKRAGAGAGSTGGSAGVLGGGAGGPDRYVSAIDLSTKAFRRGKPLHDRVISCL 750
FYY+A LS ++ F+ +YI +GGF+AL NA +D ++FA+LP+G L++S+ +++++TLGL G + KG +RY IDL+ AF+ L++RV C
Sbjct: 61 FYYKASVPLSFFIQPDFVNNYIRKGGFTALRSNAKADIDDTFALLPSGRLVMSVKKDTYETLGLVGRPSKFGDKG--------------------------NRYFIHIDLAQPAFKPKGKLYERVKWCF 163
BLAST of mRNA_P-fluviatile_contig1.353.1 vs. uniprot
Match: A0A2C9KJE3_BIOGL (Uncharacterized protein n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9KJE3_BIOGL) HSP 1 Score: 68.2 bits (165), Expect = 1.430e-8 Identity = 46/140 (32.86%), Postives = 69/140 (49.29%), Query Frame = 1
Query: 337 FVVRSLGTVFYYRARG-SLSALLEEPFLGSYILRGGFSALALNAPSDQGNSFAILPNGVLLLSLDRESFQTLGLPG-EAAPTRPKGKAKRAGAGAGSTGGSAGVLGGGAGGPDRYVSAIDLSTKAFRRGKPLHDRVISCL 750
FV+ SL F Y+ L L+E PF+ +++ +G + +++N D +S I PNGVLLLSL +++FQ LGL + PT+ K D YV I+L K+FR GK ++R + CL
Sbjct: 26 FVLESLTNQFTYKLHMIPLFCLIEMPFVQAFVKKGAINLMSINRKLDTDDSVVITPNGVLLLSLTKDTFQQLGLEAVKQTPTQRK--------------------------QDIYVVKINLLHKSFRPGKKGYNRTLWCL 139
BLAST of mRNA_P-fluviatile_contig1.353.1 vs. uniprot
Match: F0ZW14_DICPU (Uncharacterized protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZW14_DICPU) HSP 1 Score: 67.8 bits (164), Expect = 3.120e-8 Identity = 39/106 (36.79%), Postives = 60/106 (56.60%), Query Frame = 1
Query: 250 FVQQCDFIFPLPERDSVDADEEAESQARAFVVRSLGTVFYYRARGSLSALLEEPFLGSYILRGGFSALALNAPSDQGNSFAILPNGVLLLSLDRESFQTLGLPGEA 567
F Q + P PE D + E+ E + + + YY+ +L +L + FL YI GGF A++ + D GN FAILPNG ++L+L++E++Q LGL G+A
Sbjct: 89 FQQHNENSLP-PEPDQYEQQEDEEEIEKTENILN-DKQSYYQIETTLDLILSQEFLNKYIRTGGFHAISQFSYIDSGNVFAILPNGQIILNLNKETYQDLGLVGKA 192
BLAST of mRNA_P-fluviatile_contig1.353.1 vs. uniprot
Match: A0A0H5RAF3_9EUKA (Uncharacterized protein n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5RAF3_9EUKA) HSP 1 Score: 65.9 bits (159), Expect = 9.290e-8 Identity = 48/171 (28.07%), Postives = 75/171 (43.86%), Query Frame = 1
Query: 277 PLPERDSVDADEEAESQARAFVVRSLGTV-------------FYYRARGSLSALLEEPFLGSYILRGGFSALALNAPSDQGNSFAILPNGVLLLSLDRESFQTLGLPGEAAPTRPKGKAKRAGAGAGSTGGSAGVLGGGAGGPDRYVSAIDLSTKAFRRGKPLHDRVISCL 750
PLP R ++ S R F+ + V F Y+ + ++ LLE F+ YI +G SA++ +A D+ N AILPNG L LS+D+E++ +LGL G+ R + R ID+ +FR G+ L+ RV+ C+
Sbjct: 10 PLPSRVVFRYSPDSVSPCRLFLNHEIELVLPLASVPATSSGAFAYKVQLPIALLLEPSFIEKYIRQGELSAISYDAHIDRDNVVAILPNGFLCLSVDKETYHSLGLVGKRCQIRNREST-------------------------RLDITIDMRDPSFRPGQSLYKRVLWCV 155
BLAST of mRNA_P-fluviatile_contig1.353.1 vs. uniprot
Match: A0A8B9N2S7_9AVES (Ribonuclease P/MRP subunit p40 n=3 Tax=Accipitrinae TaxID=8955 RepID=A0A8B9N2S7_9AVES) HSP 1 Score: 65.5 bits (158), Expect = 1.590e-7 Identity = 69/235 (29.36%), Postives = 103/235 (43.83%), Query Frame = 1
Query: 49 GVNIEMWKNF-SAHHIQRGDVTAVVWGAPGAAPEDEGGARETPVRPSAPAAGTADAEELTRGRRAGNPFVQQCDFIFPLPERDSVDADEEAESQARAFVVRSLGTVFYYRARGSLSALLEEPFLGSYILRGGFSALALNAPSDQGNSFAILPNGVLLLSLDRESFQTLGLPGEAAPTRPKGKAKRAGAGAGSTGGSAGVLGGGAGGPDRYVSAIDLSTKAFRRGKPLHDRVISCL 750
GV + W+ +A +RGDV A AP A G R + P AG A A RG AG P +Q LP S AD + ++VR+L S+ L+ F+ +++ +G AL N DQ N+ A+LPNG L+LS+D+++++ LGL G P++ GK V+ RY+ +DL+ F H+RV+ L
Sbjct: 56 GVPLPHWRRCPAARGARRGDVGAAALAAPPAGAAAPAGLR------AGPRAGRALA---ARGAGAG-PRLQ-------LPLLKSTIADV-----GQYYLVRNL----------SVHELVAHEFIDAFVKKGSCYALTYNTKIDQDNTAALLPNGKLILSVDKDTYEELGLQGR--PSQYSGKK---------------VM--------RYIVTVDLTDSGFHPDSKKHNRVLWAL 233
BLAST of mRNA_P-fluviatile_contig1.353.1 vs. uniprot
Match: A0A852BQQ3_9PICI (RPP40 protein (Fragment) n=1 Tax=Ramphastos sulfuratus TaxID=322582 RepID=A0A852BQQ3_9PICI) HSP 1 Score: 62.4 bits (150), Expect = 1.780e-7 Identity = 39/129 (30.23%), Postives = 63/129 (48.84%), Query Frame = 1
Query: 367 YYRARG-SLSALLEEPFLGSYILRGGFSALALNAPSDQGNSFAILPNGVLLLSLDRESFQTLGLPGEAAPTRPKGKAKRAGAGAGSTGGSAGVLGGGAGGPDRYVSAIDLSTKAFRRGKPLHDRVISCL 750
YY R S+ L+ F+ +++ +G AL+ N DQ N+ A+LPNG L+LS+D+++++ LGL G P++ GK RY+ IDL+ +F H+RV+ L
Sbjct: 67 YYLVRSLSVHELVSHEFIDAFVKKGSCYALSYNTKIDQDNAAALLPNGKLILSVDKDTYEELGLQGR--PSQYSGKKAM-----------------------RYIITIDLTDSSFHPDGKRHNRVLWAL 170
BLAST of mRNA_P-fluviatile_contig1.353.1 vs. uniprot
Match: A0A6P8Q5W0_GEOSA (ribonuclease P protein subunit p40 isoform X1 n=5 Tax=Gymnophiona TaxID=8445 RepID=A0A6P8Q5W0_GEOSA) HSP 1 Score: 64.7 bits (156), Expect = 2.080e-7 Identity = 54/183 (29.51%), Postives = 87/183 (47.54%), Query Frame = 1
Query: 217 ELTRGRRA----GNPFVQQCDFIFPLPERDSVDADEEAESQARAFVVRSLGTVFYYRARG-SLSALLEEPFLGSYILRGGFSALALNAPSDQGNSFAILPNGVLLLSLDRESFQTLGLPGEAAPTRPKGKAKRAGAGAGSTGGSAGVLGGGAGGPDRYVSAIDLSTKAFRRGKPLHDRVISCL 750
+L R R A G+PF C F +PE ++ ++ +S V+++ G YY + + + F+ +I +G F AL+ N DQ N+ A+LP G L+LS+D+++++ LGL G+ P+R GK V+ RY+ IDL+ AF H RV+ L
Sbjct: 21 QLERSRHAAAIRGHPF--NCRVSFLIPECGALP--DKLKS-----VIQNFGK--YYLVKDLPIHEFVSHDFISIFIKKGAFYALSYNTKIDQDNTVAVLPTGKLILSVDKDTYEELGLQGK--PSRYSGKK---------------VM--------RYIVTIDLTDAAFLPDTKKHKRVLWAL 167 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.353.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig1.353.1 >prot_P-fluviatile_contig1.353.1 ID=prot_P-fluviatile_contig1.353.1|Name=mRNA_P-fluviatile_contig1.353.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=675bp TPVLSHIVHSLSLLCTGVNIEMWKNFSAHHIQRGDVTAVVWGAPGAAPEDback to top mRNA from alignment at P-fluviatile_contig1:4203528..4206044- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig1.353.1 ID=mRNA_P-fluviatile_contig1.353.1|Name=mRNA_P-fluviatile_contig1.353.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2517bp|location=Sequence derived from alignment at P-fluviatile_contig1:4203528..4206044- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig1:4203528..4206044- >mRNA_P-fluviatile_contig1.353.1 ID=mRNA_P-fluviatile_contig1.353.1|Name=mRNA_P-fluviatile_contig1.353.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=4050bp|location=Sequence derived from alignment at P-fluviatile_contig1:4203528..4206044- (Porterinema fluviatile SAG_2381)back to top |