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Homology
BLAST of mRNA_P-fluviatile_contig1.348.1 vs. uniprot
Match: D8LNA4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNA4_ECTSI) HSP 1 Score: 191 bits (486), Expect = 2.100e-53 Identity = 101/112 (90.18%), Postives = 108/112 (96.43%), Query Frame = 3
Query: 72 MSQCPHCFVGQCQRHRLQDHGKREQLLKARMMDPKAAQKRLFDRVVTAQLDKLEAAARAANAEDQDTYKASVSKARDRAERRGNKLSTKQQRQAAKSRLGGHLVHTMLDSDD 407
MSQCPHCFVGQCQRH+LQDHGKRE LLK++M+DPKAAQ+RLFDRVVTAQLDKLEAAAR ANA DQ+ YKASVSKARDRAERRGNKLS+KQQRQAAKSRLGGHLVHTMLDSDD
Sbjct: 1 MSQCPHCFVGQCQRHKLQDHGKRELLLKSKMVDPKAAQQRLFDRVVTAQLDKLEAAARGANAGDQEIYKASVSKARDRAERRGNKLSSKQQRQAAKSRLGGHLVHTMLDSDD 112
BLAST of mRNA_P-fluviatile_contig1.348.1 vs. uniprot
Match: A0A6H5K6N1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6N1_9PHAE) HSP 1 Score: 191 bits (486), Expect = 2.420e-52 Identity = 101/112 (90.18%), Postives = 108/112 (96.43%), Query Frame = 3
Query: 72 MSQCPHCFVGQCQRHRLQDHGKREQLLKARMMDPKAAQKRLFDRVVTAQLDKLEAAARAANAEDQDTYKASVSKARDRAERRGNKLSTKQQRQAAKSRLGGHLVHTMLDSDD 407
MSQCPHCFVGQCQRH+LQDHGKRE LLK++M+DPKAAQ+RLFDRVVTAQLDKLEAAAR ANA DQ+ YKASVSKARDRAERRGNKLS+KQQRQAAKSRLGGHLVHTMLDSDD
Sbjct: 1 MSQCPHCFVGQCQRHKLQDHGKRELLLKSKMVDPKAAQQRLFDRVVTAQLDKLEAAARGANAGDQEIYKASVSKARDRAERRGNKLSSKQQRQAAKSRLGGHLVHTMLDSDD 112
BLAST of mRNA_P-fluviatile_contig1.348.1 vs. uniprot
Match: A0A836CMD5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMD5_9STRA) HSP 1 Score: 105 bits (261), Expect = 6.920e-21 Identity = 60/112 (53.57%), Postives = 76/112 (67.86%), Query Frame = 3
Query: 72 MSQCPHCFVGQCQRHRLQDHGKREQLLKARMMDPKAAQKRLFDRVVTAQLDKLEAAARAANAEDQDTYKASVSKARDRAERRGNKLSTKQQRQAAKSRLGGHLVHTMLDSDD 407
MSQC CFVGQC+RH LQDHGKR + L A++ KR+++ ++ Q+DK EA A + DQ YK K RDRAERRGNKL+ +QQ +A K RLGGHLV+ M+DS D
Sbjct: 1 MSQCGACFVGQCKRHPLQDHGKRTKDLMAKLPSKSETLKRVYETLLKKQVDKFEAQTNAVS--DQQAYKEKQGKERDRAERRGNKLTREQQEKAKKLRLGGHLVNLMIDSSD 110
BLAST of mRNA_P-fluviatile_contig1.348.1 vs. uniprot
Match: W7T9Z9_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T9Z9_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 3.410e-8 Identity = 47/114 (41.23%), Postives = 71/114 (62.28%), Query Frame = 3
Query: 72 MSQCPHCFVGQCQRHRLQDHGKREQLLKARMMDPKAAQKRLFDRVVTAQLDKLEAAARA-ANAE-DQDTYKASVSKARDRAERRGNKLSTKQQRQA-AKSRLGGHLVHTMLDSD 404
MS CP C+VGQC++H+LQDHG RE+ L + Q+RL++ +V +D L+ +A A AE Y+ +V K R++A+R+ +K S +Q R+A A L G L+ TML +D
Sbjct: 1 MSSCPQCYVGQCRKHKLQDHGARERAL---LSSRSELQRRLYESLVQPHVDTLKTTKKATAEAEAGHCRYRDAVGKDREKAQRQKSKFSEEQVRKAQALGGLRGDLLRTMLAND 111
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 194.1 |
| Seed ortholog evalue | 1.1e-46 |
| Seed eggNOG ortholog | 2880.D8LNA4 |
| EggNOG OGs | 2CDWX@1,2S5HT@2759 |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | hypothetical protein |
| Ec32 ortholog | Ec-04_004580.1 |
| Exons | 3 |
| Model size | 1846 |
| Cds size | 1119 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622815266.592769-UTR-P-fluviatile_contig1:4190081..4190152 | 1622815266.592769-UTR-P-fluviatile_contig1:4190081..4190152 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig1 4190082..4190152 + |
| 1693561302.4288745-UTR-P-fluviatile_contig1:4190081..4190152 | 1693561302.4288745-UTR-P-fluviatile_contig1:4190081..4190152 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig1 4190082..4190152 + |
| 1622815266.639369-UTR-P-fluviatile_contig1:4193000..4193656 | 1622815266.639369-UTR-P-fluviatile_contig1:4193000..4193656 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig1 4193001..4193656 + |
| 1693561303.2224987-UTR-P-fluviatile_contig1:4193000..4193656 | 1693561303.2224987-UTR-P-fluviatile_contig1:4193000..4193656 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig1 4193001..4193656 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622815266.6043994-CDS-P-fluviatile_contig1:4190152..4190347 | 1622815266.6043994-CDS-P-fluviatile_contig1:4190152..4190347 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig1 4190153..4190347 + |
| 1693561302.6465735-CDS-P-fluviatile_contig1:4190152..4190347 | 1693561302.6465735-CDS-P-fluviatile_contig1:4190152..4190347 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig1 4190153..4190347 + |
| 1622815266.6186037-CDS-P-fluviatile_contig1:4191420..4192146 | 1622815266.6186037-CDS-P-fluviatile_contig1:4191420..4192146 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig1 4191421..4192146 + |
| 1693561302.8686857-CDS-P-fluviatile_contig1:4191420..4192146 | 1693561302.8686857-CDS-P-fluviatile_contig1:4191420..4192146 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig1 4191421..4192146 + |
| 1622815266.6291468-CDS-P-fluviatile_contig1:4192802..4193000 | 1622815266.6291468-CDS-P-fluviatile_contig1:4192802..4193000 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig1 4192803..4193000 + |
| 1693561303.0307577-CDS-P-fluviatile_contig1:4192802..4193000 | 1693561303.0307577-CDS-P-fluviatile_contig1:4192802..4193000 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig1 4192803..4193000 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig1.348.1 >prot_P-fluviatile_contig1.348.1 ID=prot_P-fluviatile_contig1.348.1|Name=mRNA_P-fluviatile_contig1.348.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=373bp
MSQCPHCFVGQCQRHRLQDHGKREQLLKARMMDPKAAQKRLFDRVVTAQL DKLEAAARAANAEDQDTYKASVSKARDRAERRGNKLSTKQQRQAAKSRLG GHLVHTMLDSDDDGNDDSDGGAGGGNRRKDRKRKSHKDKKRKRKRKHGGG GGGGSSDSSDSSSSSSSSANDEDSSSDSDSSSSEDEGRRADRKRRKRDKD KRKERRHRSGGGEGGGGNIKEKSSSSRESKKAKKRERKERRRSEKEAKRK SRAEHRPNSASRSDEDQASARGPGEGARGAAAGIGGRDAPQHSRKEQKRE RRREKKEGKKRKLHEERLDGRATVGSNGGGEAIVAASGGNGDGSSRSGSG SESDAGDGSGKKGGTGADVATS* back to topmRNA from alignment at P-fluviatile_contig1:4190082..4193656+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-fluviatile_contig1.348.1 ID=mRNA_P-fluviatile_contig1.348.1|Name=mRNA_P-fluviatile_contig1.348.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3575bp|location=Sequence derived from alignment at P-fluviatile_contig1:4190082..4193656+ (Porterinema fluviatile SAG_2381) CTTCGAATTCTCTAACCGGCATAGCGGCGACCCCGCACGAAAAGTAAACA
GACCAACGCAGGTGTGAGGAAATGTCTCAGTGTCCGCACTGCTTCGTGGG
TCAGTGCCAGAGGCACCGGCTACAGGACCATGGAAAGCGCGAGCAACTCC
TCAAGGCGAGGATGATGGACCCGAAGGCGGCCCAGAAGAGGCTCTTCGAC
CGCGTCGTGACGGCGCAGCTCGACAAGCTGGAGGCTGCCGCGCGAGCCGC
CAACGCCGAGGATCAGGTACGAGAGATACTTCAAACAACGTTGTGGGTGG
GTGTCAACGTTGGCGGGAAAAGGAGTGTCGGCGCATTCCCCGTTGGTAAT
TTCGTAATATCCCACAACCTTTTACGGGCACCGTCAACCGACGCCCTCGC
CCTCGTCGCTGCCTGTTGGCCATTATCAGCAGAGCGTGTTTGATCAACAC
GAAAAAGAAGGTCGTCACCACACCTAGGCCATGGTTTATTTGGGCGGTAG
CTGTCACACCTGTTTTTTTCACGCGGTAGGGGTTTCCTCAGGATGAGAGA
GGTATGTAGCTGGTCGAAGACAAACCTTCATTGACCTCTCGACTAGCCCA
CCAAGTATCTCGTTTTGAGCGTTGAGATAGACAGCTGTAGGGGGGGTTAG
AGGGGGGATCGAGAGGGAGAGGGCAATGGTGAGGTTGAACAAAAAAGCGG
AAATTCGAACTGTCTAATAGCATGATGGCTAGACTACCAGTGGAACCATG
GACATAAGCTTTTGTTGTGCAGCGAAAAGCGGCACGCTGCCTGCAAACGG
AAAATGACGTGGGTAGCGGTGAAACTTGCTTTACCAGTAGCTCGGGGACC
CCTGACTCTGTGACAAGTGCTTCGGAATGTGTAACCCCCGAGCTTGCGTC
CGAATCGCATAATGCAAGCAGGCCTTGGTCCTTCAAGAGATGTCTTGAGT
TACTGTTGAGGTTTCCATTCCATTGAGATGCTTTGCGCTCCCACAACGGC
CTCCTCATATACCTAGTAGTCTTCAGGGTCTATGAAGAGATTGGAAGGGT
GGACATTTTGGTCCAAATCGATTTCAAAATCCAGGGGTCCTGGTGCATAT
CCGATGAGTTCGTGTGAAGAAGCACGACCACTAGAATACCTTTCAGCGCT
TTCTGGTAGTCTTGAGGTCACCCCCTTCGTTGAAACCCTACCGCCCGGAG
TCTTATCTCACGATCTCCTTTCCTCCTCCCTTCCCTCGTGCAAAATCTCC
GCCGCGTTTTGTCGTTTTGCTCAATCGGGGGGGATGAAAAAAAAATGCGG
ACTGCAACAAAACGATATCCACGTTCTCGAGACTCGCAGGACACCTACAA
AGCGAGCGTCTCTAAGGCGCGCGACCGCGCCGAGCGCCGAGGTAACAAGC
TGTCGACAAAGCAGCAGAGGCAGGCGGCCAAGTCTCGCCTGGGGGGGCAC
CTTGTCCACACCATGCTCGACAGCGACGATGACGGCAACGATGACTCCGA
CGGCGGCGCCGGCGGCGGCAACAGGAGGAAGGATAGGAAGCGCAAGAGCC
ACAAGGACAAGAAGCGGAAGCGGAAGCGGAAGCATGGGGGCGGCGGCGGT
GGTGGTAGCAGCGATAGCAGTGATAGCAGCAGCAGCAGTAGCAGCAGCGC
CAATGATGAAGACAGCTCCAGCGACAGCGACAGCAGCAGCAGCGAGGACG
AGGGGAGAAGAGCCGACCGGAAGCGACGCAAGAGGGACAAAGACAAAAGA
AAAGAGCGTCGCCACCGCAGTGGCGGCGGCGAAGGCGGAGGCGGTAATAT
CAAGGAGAAGTCGAGTTCGTCCCGGGAATCCAAGAAGGCAAAAAAGAGGG
AGCGTAAGGAGCGGCGCCGGAGCGAGAAGGAGGCGAAACGAAAGAGCAGG
GCCGAGCATCGGCCCAACAGCGCAAGCAGGAGCGACGAGGATCAGGCTTC
GGCCCGTGGCCCGGGCGAAGGAGCACGGGGCGCCGCCGCCGGAATTGGGG
GCAGGGATGCCCCGCAGCATAGCAGGAAGGAGCAAAAGCGGGAGAGAAGG
CGGGAAAAGAAAGAGGTACGCTCATGAACCCTTCAGCGCACGGCCGTACA
GGACACGCCGCATTGTGTTTGCGGAACATAAGGGCAACTTTCTTGACATG
CACGTATGGTATGAGGCTCTCTTTGTCTCGGGGATGTGCCAAGCGGGTTT
CAGTCGTAGTGTAGAGGCGCCGCATCCCCAAGAACGGGGAACGCAGGCGA
CTATTTTATTTTTCGGCTTTTTCGATAAAAGTTCACCCGCACTACACCGG
GCACCGTTAATGCAGAGGGCACCCTGCTGTGCCGCGAACATGTCCTACTC
TTCGCTGAAAACGGTCCTTCGTGTGCAAATCATGGTCGCAGAGACGTGTT
TCGGTTTTTGCTTCACCAGTCTCAAGACTGCCGTTGCTGCCGTGTTAGCT
GCGTCAACCATACGTCGAAGCCCCTCCCTCTGTCCAATTCTCCTCACGGG
CTCGGCTCCTCGAAGACGCGAGGGTGAACGGTCGATTTGATTACTCATGT
TAATAACTCAAGATTGCGGGTCGGGATATTCTCCCTTGCTCCGCCTTTGG
GCACCACCGTACCCCTTGTTCGCTGTCAACAACTCCCACTCCGGTGCATA
TTGTGCGTTGTCCGCTCAGGCTCATGCACACAACGCACCGAATTGCACTT
CTGCTTTTGCGCACCTCGCAGGGTAAGAAGCGAAAGCTTCACGAAGAACG
CCTCGACGGGCGCGCCACGGTAGGAAGCAACGGAGGCGGCGAAGCCATCG
TTGCAGCCAGTGGTGGCAATGGTGATGGTAGCAGCAGAAGCGGAAGCGGC
AGTGAAAGTGACGCCGGCGATGGTAGCGGCAAGAAAGGCGGGACTGGGGC
GGATGTCGCCACCTCGTAGGGTAAAGGGCATTGTAAAACAAGCGGTATCG
CTTCATGGTGGTCAGATTTTGAGGGGAAATTCTCTCCCCTACATTTTCCA
GCATTCGAGGTTTTTATCGTTCGGAACTCCCAGAGCGCAGTGAAGATGGG
AACTTGGAAGGCATTGATTCTGAGAGCTGAAGTTTGTGCGTTCTGCGCTT
TCAATCCGGATTCCGGACAACCAAGGCCGACCGTAGTTCAACGACAAGTT
GAGACCAAAAAGAATAGGGAGGAGGTGAAGGCATACCCACAAGTTAGATT
GATGGGAAAATTTTCTGCTCACCCTCGGAAAAAGTGTAACATCAAGAGGG
CGGGGTGACGCCACAGGCCTAGTGGTCACGTGCACGGGACACCTGTGGGC
GTGAATTGAATTGGGCGACCGGTCTAGATACCATGTGACCGCTTTAGATG
CTATGTGATGAGGCCGTGGTACAACGAGAGTTTTGCGTGTTTTATGTCTG
CCAGCTGATTAGGCTTTGGCTTTCTATTCGATGTGGTGTGAAAGCATGTC
ACCTGTTAGCCTTGCTTACACGGCGTCGCTGAGAGAGGAAATGGGTGGGG
AGGAGAGGTGCGATTTAGAAAATGGCCACGAAACAACAGAAGAAAGTCCA
CCGCCTCTGCCGATAATTCACTCCC back to topCoding sequence (CDS) from alignment at P-fluviatile_contig1:4190082..4193656+ >mRNA_P-fluviatile_contig1.348.1 ID=mRNA_P-fluviatile_contig1.348.1|Name=mRNA_P-fluviatile_contig1.348.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2238bp|location=Sequence derived from alignment at P-fluviatile_contig1:4190082..4193656+ (Porterinema fluviatile SAG_2381) ATGTCTCAGTGTCCGCACTGCTTCGTGGGTCAGTGCCAGAGGCACCGGCT ACAGGACCATGGAAAGCGCGAGCAACTCCTCAAGGCGAGGATGATGGACC CGAAGGCGGCCCAGAAGAGGCTCTTCGACCGCGTCGTGACGGCGCAGCTC GACAAGCTGGAGGCTGCCGCGCGAGCCGCCAACGCCGAGGATCAGATGTC TCAGTGTCCGCACTGCTTCGTGGGTCAGTGCCAGAGGCACCGGCTACAGG ACCATGGAAAGCGCGAGCAACTCCTCAAGGCGAGGATGATGGACCCGAAG GCGGCCCAGAAGAGGCTCTTCGACCGCGTCGTGACGGCGCAGCTCGACAA GCTGGAGGCTGCCGCGCGAGCCGCCAACGCCGAGGATCAGGACACCTACA AAGCGAGCGTCTCTAAGGCGCGCGACCGCGCCGAGCGCCGAGGTAACAAG CTGTCGACAAAGCAGCAGAGGCAGGCGGCCAAGTCTCGCCTGGGGGGGCA CCTTGTCCACACCATGCTCGACAGCGACGATGACGGCAACGATGACTCCG ACGGCGGCGCCGGCGGCGGCAACAGGAGGAAGGATAGGAAGCGCAAGAGC CACAAGGACAAGAAGCGGAAGCGGAAGCGGAAGCATGGGGGCGGCGGCGG TGGTGGTAGCAGCGATAGCAGTGATAGCAGCAGCAGCAGTAGCAGCAGCG CCAATGATGAAGACAGCTCCAGCGACAGCGACAGCAGCAGCAGCGAGGAC GAGGGGAGAAGAGCCGACCGGAAGCGACGCAAGAGGGACAAAGACAAAAG AAAAGAGCGTCGCCACCGCAGTGGCGGCGGCGAAGGCGGAGGCGGTAATA TCAAGGAGAAGTCGAGTTCGTCCCGGGAATCCAAGAAGGCAAAAAAGAGG GAGCGTAAGGAGCGGCGCCGGAGCGAGAAGGAGGCGAAACGAAAGAGCAG GGCCGAGCATCGGCCCAACAGCGCAAGCAGGAGCGACGAGGATCAGGCTT CGGCCCGTGGCCCGGGCGAAGGAGCACGGGGCGCCGCCGCCGGAATTGGG GGCAGGGATGCCCCGCAGCATAGCAGGAAGGAGCAAAAGCGGGAGAGAAG GCGGGAAAAGAAAGAGGACACCTACAAAGCGAGCGTCTCTAAGGCGCGCG ACCGCGCCGAGCGCCGAGGTAACAAGCTGTCGACAAAGCAGCAGAGGCAG GCGGCCAAGTCTCGCCTGGGGGGGCACCTTGTCCACACCATGCTCGACAG CGACGATGACGGCAACGATGACTCCGACGGCGGCGCCGGCGGCGGCAACA GGAGGAAGGATAGGAAGCGCAAGAGCCACAAGGACAAGAAGCGGAAGCGG AAGCGGAAGCATGGGGGCGGCGGCGGTGGTGGTAGCAGCGATAGCAGTGA TAGCAGCAGCAGCAGTAGCAGCAGCGCCAATGATGAAGACAGCTCCAGCG ACAGCGACAGCAGCAGCAGCGAGGACGAGGGGAGAAGAGCCGACCGGAAG CGACGCAAGAGGGACAAAGACAAAAGAAAAGAGCGTCGCCACCGCAGTGG CGGCGGCGAAGGCGGAGGCGGTAATATCAAGGAGAAGTCGAGTTCGTCCC GGGAATCCAAGAAGGCAAAAAAGAGGGAGCGTAAGGAGCGGCGCCGGAGC GAGAAGGAGGCGAAACGAAAGAGCAGGGCCGAGCATCGGCCCAACAGCGC AAGCAGGAGCGACGAGGATCAGGCTTCGGCCCGTGGCCCGGGCGAAGGAG CACGGGGCGCCGCCGCCGGAATTGGGGGCAGGGATGCCCCGCAGCATAGC AGGAAGGAGCAAAAGCGGGAGAGAAGGCGGGAAAAGAAAGAGGGTAAGAA GCGAAAGCTTCACGAAGAACGCCTCGACGGGCGCGCCACGGTAGGAAGCA ACGGAGGCGGCGAAGCCATCGTTGCAGCCAGTGGTGGCAATGGTGATGGT AGCAGCAGAAGCGGAAGCGGCAGTGAAAGTGACGCCGGCGATGGTAGCGG CAAGAAAGGCGGGACTGGGGCGGATGTCGCCACCTCGTAGGGTAAGAAGC GAAAGCTTCACGAAGAACGCCTCGACGGGCGCGCCACGGTAGGAAGCAAC GGAGGCGGCGAAGCCATCGTTGCAGCCAGTGGTGGCAATGGTGATGGTAG CAGCAGAAGCGGAAGCGGCAGTGAAAGTGACGCCGGCGATGGTAGCGGCA AGAAAGGCGGGACTGGGGCGGATGTCGCCACCTCGTAG back to top
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