mRNA_P-fluviatile_contig1.339.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig1.339.1 vs. uniprot
Match: D8LLQ9_ECTSI (PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLQ9_ECTSI) HSP 1 Score: 589 bits (1518), Expect = 3.360e-184 Identity = 313/494 (63.36%), Postives = 347/494 (70.24%), Query Frame = 2
Query: 1145 RGGSWGETVAIGGWVAGAAXXXXXXEGAGTMVTTPPRTVMQGFLKKRVAGRLWGVSEGWEYRWLVLRDDGRLLWYLTVPADPWEVPNGYLSLRGARVSLSEGALLRNHLREDEVRADGLCPFLVDVDDNDAXXXXXXXVPARNILPAADHEHTSGPQLRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERRIVFFSAWGAEERAEWVDALSRYAE-----GGGTGA---RAEVGRELRARARDRRKQGLDRMLGAPHEVLARPHEAFALVVGGNGRGGVTRAEFCKSAAQHLLPMCDVYTAGTVFDALCPKRTDAPENPGPGSASSEAFEELLDMMGAGAEVKGVDGVRTGRVHAEALAGDGIGDRLTFDVFRRYAEALSRAFRPSDAHPSWEDLRIRLGLDPLEALLMGEEFVVEAPRSTSSQLDLKVLAGWSGNLFLTDRHLFLHFPKRQQVRVVPLGSIAEVQGSSSRAGPFTVDDAIELFGCE 2602
+GG+WGET AIGG VA A G + +PPR+VMQGFL+KR A R WG S WEYRW+VLRDDGRLLWYL+VPADPWEVPNGYL LRGA VS SE LLRNHLREDE PQ ++ ERR+VF S WG EERAEWV+ALS+Y E GGG+G RA+ GRELR RA +RR++GL R+L P EVL+ PHEAFAL+VGG GGVTR EFC+SA +HLLPMCDVYTAGTVFDALCPKRTD P+NPGPGS S E EELLD+MG GA+ +GVDGVRTGRVHAEALAG GIG+RLTFDVFRRYAEALSRAFRPSD+HPSWEDLRIRLGL PLEAL+MGEEFV EAPRS+ SQLDL LAGWSGNLFLTDRHL LHFPKRQQ RVVPLGS+ +V+GSSSRAGPFTVDDAIELFGCE
Sbjct: 321 QGGAWGETAAIGGRVAAA--------GVRVITASPPRSVMQGFLRKRAAARSWGSSGVWEYRWVVLRDDGRLLWYLSVPADPWEVPNGYLCLRGAGVSFSESVLLRNHLREDE------------------------------------------PQQQQEG---------------------------------ERRVVFLSTWGTEERAEWVEALSKYTESSGSGGGGSGKNEPRADCGRELRLRAEERRRKGLARLLETPEEVLSNPHEAFALLVGGGSGGGVTRGEFCESAGKHLLPMCDVYTAGTVFDALCPKRTDVPDNPGPGS-SGEGLEELLDLMGEGAQARGVDGVRTGRVHAEALAGQGIGERLTFDVFRRYAEALSRAFRPSDSHPSWEDLRIRLGLHPLEALIMGEEFVAEAPRSSFSQLDLMALAGWSGNLFLTDRHLVLHFPKRQQARVVPLGSVQDVRGSSSRAGPFTVDDAIELFGCE 730
BLAST of mRNA_P-fluviatile_contig1.339.1 vs. uniprot
Match: A0A6H5L705_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L705_9PHAE) HSP 1 Score: 332 bits (850), Expect = 5.260e-96 Identity = 314/609 (51.56%), Postives = 351/609 (57.64%), Query Frame = 2
Query: 3596 MRSRALSKVTRSGARPLLFLSCSNVPNRHEIVRDFLKSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHPSGATNQDAAETRNNGAEQDQRVEGGGQVREQARKTGAGSRRGTGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRWLLTLARLMARPREFEARRAAAVRAFTPQKFRLEWELFWELTDPILDGVEAMTADLLGWKNPLRSLSVMTALLLVAYYDLVRYAIPLALLSNVAYILGEACGCVTGATGSPPPPSASVPRSLATLCLGRRARLRCQCWRRVPPQLSMWQTRWEEEIKRG----FGIEQKYYLRSRSNSP---TRARRPLTARSPA--GAGSATSQRRVAASHQTTATDPGSMVTSKPA--VSQTSGGSVNSSSRRSVGSGRGRENESSWAPKT--VGELLASDDSADSAVPSVSGSGRSSSAWGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIIGRVKGMQDRAGRTQAKLHSYNAVLLKVKSLHAWSDPGRTKIWIAAVSLLAAVLVIVPARRVAYTFATLVLFFFTEPIRSKTKNIFELLAEDFWAGLPVESGTHTNVRMAAIYSRQD 5383
MRSRALSK TRSGARPLLFLS +PNRHEIVR FL+S+ XXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXX RWLLTLAR MARPREFE RRAAAVR FTPQKFR EWELFWEL DP+ DG+E T DLL WKNP++SLSVMT LLLVAY+DLVRYAIPLALL+NVAYI G GC+T + +A L R+ P Q + +R G E RSR SP +R +RP + S A G+A +R+AAS + A G +P+ + + G V++S+ R +G + SW + GE A A SGS + AWG XXXXXXXXXXXXXXXX II RVKGMQDRAGRTQAKLH+YNAVLL+VKSLHAWSDPGRTK+W AAVSLLAAVL IVPAR YTFA LVLF FTEPIR +TKNI ELL EDFW GLPVESGTHTNVRMAAIYSR D
Sbjct: 1 MRSRALSKATRSGARPLLFLSSKGIPNRHEIVRAFLESAGTNNGGRDDYSGSCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------------------------------XXXXXXXXXXXXXXXXXXXLDELDERSRRRGRRWLLTLARFMARPREFELRRAAAVRTFTPQKFRQEWELFWELVDPVFDGLEKATKDLLQWKNPMQSLSVMTGLLLVAYHDLVRYAIPLALLANVAYIYGV--GCIT---------------TDGXXXXXXQADLFGNAPRKRPAVEGDGQQLQQHTRRRSSGGRLGAEGDGSRRSRPPSPVPGSRLQRPAPSPSAAVTAGGTAPGVQRLAASSRMAAARGGGSAEGEPSSVAVRAADGEVSASASRGGVAGA----DESWVREAPAAGETNAHGQGA-------SGSVVTPRAWGEAEMSRAGKSSGGPAXXXXXXXXXXXXXXXXGG-----------IISRVKGMQDRAGRTQAKLHAYNAVLLRVKSLHAWSDPGRTKVWAAAVSLLAAVLAIVPAR---YTFAALVLFLFTEPIRPETKNIAELLLEDFWEGLPVESGTHTNVRMAAIYSRHD 531
BLAST of mRNA_P-fluviatile_contig1.339.1 vs. uniprot
Match: A0A6H5LAP6_9PHAE (PH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAP6_9PHAE) HSP 1 Score: 261 bits (667), Expect = 5.350e-73 Identity = 191/320 (59.69%), Postives = 218/320 (68.12%), Query Frame = 2
Query: 1145 RGGSWGETVAIGGWVAGAAXXXXXXEGAGTMVTT--PPRTVMQGFLKKRVAGRLWGVSEGWEYRWLVLRDDGRLLWYLTVPADPWEVPNGYLSLRGARVSLSEGALLRNHLREDEVRADGLCPFLVDVDDNDAXXXXXXXVPARNILPAADHEHTSGPQLRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------ERRIVFFSAWGAEERAEWVDALSRYAEGGGTGA--------RAEVGRELRARARDRRKQGLDRMLGAPHEVLARPHEAFALVVGGNGRGGVTRAEFCKSAAQHLLPMCDVYTAG 2047
+GG+WGET AIGG VA A G VTT PPR VMQGFL+KR A R WG S WEYRW+VLRDDGRLLWYL+VPADPWEVPNGYL LRGARVS SEG LLRN+LREDEV+ D LCPF+VDV ++ XXXXX +L A + XXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXX ERR+VF S WG EERAEWV+ALS Y + G+G RA+ GRELR RA +RR++GL R+L P EVL+ PHEAFAL+VG GGVTR EFC+ + P C V++ G
Sbjct: 119 QGGAWGETAAIGGRVAAA--------GVRARVTTASPPRRVMQGFLRKRAAARSWGSSGVWEYRWVVLRDDGRLLWYLSVPADPWEVPNGYLCLRGARVSFSEGVLLRNNLREDEVQGDRLCPFVVDVIEHGDGXXXXXSGGDPAVLQQAHWQQXXXXXXXXXXXXXXXXXGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGERRVVFLSTWGTEERAEWVEALSMYTQSSGSGGAGGGKNDPRADRGRELRLRAEERRRKGLGRLLETPEEVLSNPHEAFALLVGSGSGGGVTRGEFCEGVHR---PRCGVHSGG 427
BLAST of mRNA_P-fluviatile_contig1.339.1 vs. uniprot
Match: A0A6H5L884_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L884_9PHAE) HSP 1 Score: 238 bits (607), Expect = 5.740e-66 Identity = 210/356 (58.99%), Postives = 222/356 (62.36%), Query Frame = 2
Query: 2147 MGAGAEVKGVDGVRTGRVHAEALAGDGIGDR-------------------LTFDVFRRYAEALSRAFRPSDAHPSWEDLRIRLGLDPLEALLMGEEFVVEAPRSTSSQLDLKVLAGWSGNLFLTDRHLFLHFPKRQQVRVVPLGSIAEVQGSSSRA-------GPFTVDDAIELFGCEASDPVHTVPLGVIRDETAGREAATAAALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGNEDSNHGNTNGGQGPVATADEEHGSGSXXRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAQRKAYRLVLTKVKMQRLVSKAEECGGTRQEWLDCLREIVE 3136
MG G E +GVDGVRTGRVHAEALAG GIG+R LTFDVFRRY+EALSRAFRPSD+HPSWEDLRIRLGL PLE+L+MGEEFV E PRS+SSQLDL LAGWSGNLFLTDRHL LHFPKRQQ RVVPLGS+ +V+GSSSRA XXXXXXXXX XXXXXXXXXXX S H GG XX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +RKAYRLVLTKVKMQRLVSK EECGGTRQEWLDCLRE+VE
Sbjct: 1 MGEGTEARGVDGVRTGRVHAEALAGHGIGERYPVRSLDTASDGVANTELRLTFDVFRRYSEALSRAFRPSDSHPSWEDLRIRLGLHPLESLIMGEEFVAEVPRSSSSQLDLMALAGWSGNLFLTDRHLLLHFPKRQQARVVPLGSVQDVRGSSSRAVAKEASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGEWPPTLPSAAAXXXXXXXXXXXKVERGPSGHRTPTGGXXXXXXX--------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVEDGAEVRKGERKAYRLVLTKVKMQRLVSKPEECGGTRQEWLDCLREMVE 348
BLAST of mRNA_P-fluviatile_contig1.339.1 vs. uniprot
Match: D8LLQ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLQ6_ECTSI) HSP 1 Score: 183 bits (464), Expect = 4.340e-50 Identity = 94/111 (84.68%), Postives = 99/111 (89.19%), Query Frame = 2
Query: 5051 MQDRAGRTQAKLHSYNAVLLKVKSLHAWSDPGRTKIWIAAVSLLAAVLVIVPARRVAYTFATLVLFFFTEPIRSKTKNIFELLAEDFWAGLPVESGTHTNVRMAAIYSRQD 5383
MQDRAGRTQAKLH+YNAVLL+VKSLHAWSDPGRTK+W AAVSLLAA+L IVPAR YTFA LVLF FTEP+R KTKNI ELL EDFW GLPVESGTHTNVRMAAIYSR D
Sbjct: 1 MQDRAGRTQAKLHAYNAVLLRVKSLHAWSDPGRTKVWAAAVSLLAALLAIVPAR---YTFAALVLFLFTEPVRPKTKNIAELLLEDFWEGLPVESGTHTNVRMAAIYSRHD 108
BLAST of mRNA_P-fluviatile_contig1.339.1 vs. uniprot
Match: D8LLQ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLQ7_ECTSI) HSP 1 Score: 147 bits (371), Expect = 1.580e-37 Identity = 73/91 (80.22%), Postives = 80/91 (87.91%), Query Frame = 2
Query: 4079 MARPREFEARRAAAVRAFTPQKFRLEWELFWELTDPILDGVEAMTADLLGWKNPLRSLSVMTALLLVAYYDLVRYAIPLALLSNVAYILGE 4351
MARPREFE RRAAAVRAFTPQKFR EWELFWEL DP+ DG+E T DLL WKNP++SLSVMT LLLVAY+DLVRYAIPLALL+NVAYI +
Sbjct: 1 MARPREFELRRAAAVRAFTPQKFRQEWELFWELVDPVFDGLEKTTEDLLQWKNPVQSLSVMTGLLLVAYHDLVRYAIPLALLANVAYIYAQ 91
BLAST of mRNA_P-fluviatile_contig1.339.1 vs. uniprot
Match: A0A835YWJ6_9STRA (PRT_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWJ6_9STRA) HSP 1 Score: 107 bits (266), Expect = 1.490e-23 Identity = 54/103 (52.43%), Postives = 74/103 (71.84%), Query Frame = 2
Query: 5075 QAKLHSYNAVLLKVKSLHAWSDPGRTKIWIAAVSLLAAVLVIVPARRVAYTFATLVLFFFTEPIRSKTKNIFELLAEDFWAGLPVESGTHTNVRMAAIYSRQD 5383
QAKLH+YN LLK++SL AW+DP RTK+++ + A +L +P R YT+A V+F FT+P+RS K + ELL +DFW GLPV+S HTN+ MAAIY+ Q+
Sbjct: 2 QAKLHAYNVALLKLRSLVAWTDPTRTKVFVLFLLFAALLLATIPLR---YTWAGAVVFLFTKPLRSMKKTVPELLLDDFWRGLPVDSALHTNLDMAAIYTLQE 101
BLAST of mRNA_P-fluviatile_contig1.339.1 vs. uniprot
Match: D8LLQ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLQ4_ECTSI) HSP 1 Score: 88.6 bits (218), Expect = 2.310e-16 Identity = 43/51 (84.31%), Postives = 44/51 (86.27%), Query Frame = 2
Query: 5231 ATLVLFFFTEPIRSKTKNIFELLAEDFWAGLPVESGTHTNVRMAAIYSRQD 5383
A LVLF FTEP+R KTKNI ELL EDFW GLPVESGTHTNVRMAAIYSR D
Sbjct: 103 AALVLFLFTEPVRPKTKNIAELLLEDFWEGLPVESGTHTNVRMAAIYSRHD 153
BLAST of mRNA_P-fluviatile_contig1.339.1 vs. uniprot
Match: A0A7S1CBD2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CBD2_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 2.690e-7 Identity = 31/80 (38.75%), Postives = 50/80 (62.50%), Query Frame = 2
Query: 5030 IIGRVKGMQDRAGRTQAKLHSYNAVLLKVKSLHAWSDPGRTKIWIAAVSLLAAVLVIVPARRVAYTFATLVLFFFTEPIR 5269
++ R + ++D GRTQ ++H +N VLLK++SL+AW +P RT++ IA + +VP R + FA V+F F P+R
Sbjct: 38 LLDRFRRLRDTLGRTQRRMHRWNMVLLKMRSLYAWQEPSRTRMLIAGNLFFVLLFSVVPFRLL---FAAFVIFLFARPLR 114 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.339.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig1.339.1 >prot_P-fluviatile_contig1.339.1 ID=prot_P-fluviatile_contig1.339.1|Name=mRNA_P-fluviatile_contig1.339.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1387bp MVTTPPRTVMQGFLKKRVAGRLWGVSEGWEYRWLVLRDDGRLLWYLTVPAback to top mRNA from alignment at P-fluviatile_contig1:4111615..4131653+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig1.339.1 ID=mRNA_P-fluviatile_contig1.339.1|Name=mRNA_P-fluviatile_contig1.339.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=20039bp|location=Sequence derived from alignment at P-fluviatile_contig1:4111615..4131653+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig1:4111615..4131653+ >mRNA_P-fluviatile_contig1.339.1 ID=mRNA_P-fluviatile_contig1.339.1|Name=mRNA_P-fluviatile_contig1.339.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=8322bp|location=Sequence derived from alignment at P-fluviatile_contig1:4111615..4131653+ (Porterinema fluviatile SAG_2381)back to top |