mRNA_P-fluviatile_contig1.338.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig1.338.1
Unique NamemRNA_P-fluviatile_contig1.338.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig1.338.1 vs. uniprot
Match: D8LLR0_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLR0_ECTSI)

HSP 1 Score: 332 bits (851), Expect = 1.710e-106
Identity = 226/372 (60.75%), Postives = 250/372 (67.20%), Query Frame = 2 
Query:  212 MMSDGSGTDRPPLAKEVEELLESLDTGDLVLFDRPCLKMGGFFGAAVCAAAKVVGGSPFDHIGVVVKDENGLNLMVEASFSGVAVRPLCERVRRSSASQICVRRLQADRSEEMRAEALRFASDVARVPYKEGGEGLLQMVAAAFRFHPAKEQRRRVHAEAIALSTSIASLEREL---SAHQAEGAAAXXXXXPNPAAVAIRERLRRAITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGTAPPHLLAHTKPQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPPTTFQPQYDGGLFCSELVAALYQRLGLLDAPFPARHDYVPADFAQSLGSPVEFLGATE 1318
            M   G  + R PL+ +V +LLE LDTGDLVLFDRPCLKMGGFFGAA+CAAAKVVGG PFDHIGVVVKDE GLN+MVEASFSGVAVRPLCERVRRSSASQICVRRLQA R+EEMR EA RF S+V+ +PYKEG EGLLQMV+AAFRFHPAKEQRRRVHAE +ALS SIASLE+EL   +  + +G AA           A +ERLR+AIT                      XXXXXXXXXXXXXXXXXXXXXXX               P    +HT   P                                PP + +P +DGGLFCSELVAALYQRLGLLDA FPARHDYVPADFAQSLG PV+ LGA +
Sbjct:    1 MAEVGDKSGRAPLSGDVRDLLEGLDTGDLVLFDRPCLKMGGFFGAAICAAAKVVGGVPFDHIGVVVKDEKGLNVMVEASFSGVAVRPLCERVRRSSASQICVRRLQAHRTEEMREEARRFVSEVSHLPYKEGSEGLLQMVSAAFRFHPAKEQRRRVHAETVALSASIASLEKELELTAKPEMDGDAAVRVD-------ATKERLRQAITRRRRALVYLAASGAAPEPSGRPXXXXXXXXXXXXXXXXXXXXXXXAPSNDSLPLRQTPIGPLAPASHTPLSPSP------------------------------PPPSAEP-FDGGLFCSELVAALYQRLGLLDAGFPARHDYVPADFAQSLGHPVDCLGAVD 334
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BLAST of mRNA_P-fluviatile_contig1.338.1 vs. uniprot
Match: A0A6H5L9T0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9T0_9PHAE)

HSP 1 Score: 342 bits (878), Expect = 8.290e-106
Identity = 290/458 (63.32%), Postives = 312/458 (68.12%), Query Frame = 2 
Query:  278 SLDTGDLVLFDRPCLKMGGFFGAAVCAAAKVVGGSPFDHIGVVVKDENGLNLMVEASFSGVAVRPLCERVRRSSASQICVRRLQADRSEEMRAEALRFASDVARVPYKEGGEGLLQMVAAAFRFHPAKEQRRRVHAEAIALSTSIASLEREL---SAHQAEGAAAXXXXXPNPAAVAIRERLRRAITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------LGTAPPHLLAHTKPQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPPTTFQPQYDGGLFCSELVAALYQRLGLLDAPFPARHDYVPADFAQSLGSPVEFLGATEDTASTTAGEDRGDSVGNAAPATVTVTGVSEEEKSRKGQQRSNGEREQDVRVSASS------LPPP--IPEGGGRVALLKGATLGPGLWLRSGSRLHPPP 1591
            SLDTGDLV FDRPCLKMGGFFGAA+CAAAKVVGG PFDHIGVVVKDE GLN+MVEASFSGVAVRPLCERVRRSSASQICVRRLQA R+EEMR EA RF S+V+ +PYKEG EGLLQMV+AAFRFHPAKEQRRRVHAE +ALS SIASLE+EL   +  +  G AA           A +ERLRRAIT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            +G   PH  +HT   P XXXXX                               +P +DGGLFCSELVAALYQRLGLLDA FPARHDYVPADFAQSLG PV+ LGA +    T  G D               TG  E      G++  +  R  D     SS      LPPP  IPEGGGRVALL+GA LGPG WLR G    P P
Sbjct:    9 SLDTGDLVFFDRPCLKMGGFFGAAICAAAKVVGGVPFDHIGVVVKDEKGLNVMVEASFSGVAVRPLCERVRRSSASQICVRRLQAHRTEEMREEARRFVSEVSHLPYKEGSEGLLQMVSAAFRFHPAKEQRRRVHAETVALSASIASLEKELELIAKPETGGDAAVRVD-------ATKERLRRAITRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSDDSLPSRQAPIGPVAPH--SHTPLSPSXXXXXA------------------------------EP-FDGGLFCSELVAALYQRLGLLDAGFPARHDYVPADFAQSLGHPVDCLGAVDLDEDTGGGGDG-------------ATGNGERSS---GEETPSRRRHPDAEEGGSSSCPAKILPPPTQIPEGGGRVALLRGAALGPGRWLRGGPPGRPSP 410
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BLAST of mRNA_P-fluviatile_contig1.338.1 vs. uniprot
Match: A0A835ZEA6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEA6_9STRA)

HSP 1 Score: 109 bits (273), Expect = 1.350e-24
Identity = 66/151 (43.71%), Postives = 91/151 (60.26%), Query Frame = 2 
Query:  281 LDTGDLVLFDRPCLKMGGFFGAAVCAAAKVVGGSPFDHIGVVVKDENGLNLMVEASFSGVAVRPLCERVRRSSASQICVRRLQADRSEEMRAEALRFASDVARVPYKEGGEGLLQMVAAAFRFHPAKEQRRRVHAEAIALSTSIASLEREL 733
            LDTGD+VLF RPC +MG   G  +C   K V  +P+DHIGVVVKD++G N + EA+FSGV    L  R++RSSA  I VRRL  +R++ MR  A ++ +++ + PYK       Q+V  A   +PAK +RR +H     L      +E EL
Sbjct:    1 LDTGDIVLFSRPCQRMG-VLGCILCLGTKTVHATPWDHIGVVVKDKDGTNRIWEAAFSGVKHYDLHARLQRSSAYMIAVRRLYTERNDAMRESARQYVAEIEQRPYKAS---YAQLVRVAVSQYPAKRRRRDLHRSMRRLEEDATFVESEL 147
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BLAST of mRNA_P-fluviatile_contig1.338.1 vs. uniprot
Match: A0A7S1NCK3_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NCK3_9EUGL)

HSP 1 Score: 103 bits (258), Expect = 1.130e-22
Identity = 54/113 (47.79%), Postives = 77/113 (68.14%), Query Frame = 2 
Query:  266 ELLESLDTGDLVLFDRPCLKMGGFFGAAVCAAAKVVGGSPFDHIGVVVKDENGLNLMVEASFSGVAVRPLCERVRRSSASQICVRRLQADRSEEMRAEALRFASDVARVPYKE 604
            +L + +D GDLVLF+R CLKM  F GAAVC +AK+   S +DH+G+VV+D +G   +++A F GV   PL ER+RRS +  IC RRL   R+ EMR + + F ++V + PYK+
Sbjct:    7 QLPDGIDAGDLVLFNRQCLKMSPF-GAAVCFSAKLYCASKWDHVGIVVRDPDGSLHILDAGFGGVRKYPLLERLRRSKSDDICFRRLAVPRTNEMRQQLIDFTTEVVQAPYKK 118
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BLAST of mRNA_P-fluviatile_contig1.338.1 vs. uniprot
Match: M1VD17_CYAM1 (Similar to mitochondrial calcium-dependent solute carrier n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1VD17_CYAM1)

HSP 1 Score: 109 bits (273), Expect = 2.420e-21
Identity = 73/179 (40.78%), Postives = 103/179 (57.54%), Query Frame = 2 
Query:  203 KAQMMSDGSGTDRPPLAKEVEELLE-SLDTGDLVLFDRPCLKMGGFFGAAVCAAAKVVGGSPFDHIGVVVKDENGLNLMVEASFSGVAVRPLCERVRRSSASQICVRRLQADRSEEMRAEALRFASDVARVPYKEGGEGLLQMVAAAFRFHPAK-EQRRRVHAEAIALSTSIASLEREL 733
            ++Q+ S   GT+   L +E    L   LD GD+VLF+R CL M    GA +CA AK +  S +DH+G+VV+ E+G   ++EA+ SGV +RPL ER+RRS +++I  RRL   R+E  R E L FA  V   PYK     +L  V      HPA  ++R R+HA  ++       +EREL
Sbjct:   68 QSQVRSSTGGTE---LKRERRVTLPPGLDAGDIVLFNRRCLAMAPL-GALICAVAKAMSNSRWDHVGIVVRKEDGSLHLLEANLSGVTLRPLDERIRRSRSNEIAFRRLSIIRTERFRTELLHFAEQVLETPYKNDLGAMLVSV-----IHPADMQERERLHALLVSRRAQRMEVEREL 237
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BLAST of mRNA_P-fluviatile_contig1.338.1 vs. uniprot
Match: A0A6T6KN09_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A6T6KN09_9RHOD)

HSP 1 Score: 97.4 bits (241), Expect = 4.100e-20
Identity = 65/159 (40.88%), Postives = 91/159 (57.23%), Query Frame = 2 
Query:  215 MSDGSGTDRPPLAKEVEELLESLDTGDLVLFDRPCLKMGGFFGAAVCAAAKVVGGSPFDHIGVVVKDENGLNLM-VEASFSGVAVRPLCERVRRSSASQICVRRLQADRSEEMRAEALRFASDVARVPYKEGGEGLLQMVAAAFRFHP-AKEQRRRVHA 685
            M  G+  +R        +L  S+D+GD+VLF+R C  M   +GAA+C  AK    S +DH+G+VV+D +  NL  +EA   GV +R L +RV +S +  I VRRL A R++E R +   FA  +   PY E G GLLQ   A F   P  K++R R+HA
Sbjct:    1 MEKGTEEERKQGKPAEVQLPRSVDSGDIVLFNRRCTSMT-VYGAAICFVAKFFSNSKWDHVGIVVRDPDSKNLFFLEADLGGVKLRKLSDRVTKSKSHDIAVRRLSAMRTDEFRRQLWNFAQQMTGRPY-ETGTGLLQAAQAVF--DPLTKQERERLHA 155
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BLAST of mRNA_P-fluviatile_contig1.338.1 vs. uniprot
Match: A0A7J7IKN1_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IKN1_9RHOD)

HSP 1 Score: 105 bits (261), Expect = 6.800e-20
Identity = 68/171 (39.77%), Postives = 94/171 (54.97%), Query Frame = 2 
Query:  224 GSGTDRPPLAKEVEELLESLDTGDLVLFDRPCLKMGGFFGAAVCAAAKVVGGSPFDHIGVVVKDENGLNLMVEASFSGVAVRPLCERVRRSSASQICVRRLQADRSEEMRAEALRFASDVARVPYKEGGEGLLQMVAAAFRFHPAK-EQRRRVHAEAIALSTSIASLEREL 733
            G G   PP           LD GD+VLF+R CL M    GA +CA AK +  S +DH+G+VV+ E+G   ++EA+ SGV +RPL ER+RRS +++I  RRL   R++  R E   FA  V   PYK     +L  V      HPA  ++R R+HA  ++       +EREL
Sbjct:   81 GRGVTLPP----------GLDAGDIVLFNRRCLAMAPL-GALICAVAKAMSNSRWDHVGIVVRKEDGSLHLLEANLSGVTLRPLDERIRRSRSNEIAFRRLSIVRTDRFRRELEHFAEQVLETPYKNDFGAMLVSV-----IHPADMQERERLHALLVSRHAQRMEVEREL 235
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BLAST of mRNA_P-fluviatile_contig1.338.1 vs. uniprot
Match: A0A7S2ZBK1_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZBK1_9RHOD)

HSP 1 Score: 100 bits (250), Expect = 1.260e-18
Identity = 65/158 (41.14%), Postives = 94/158 (59.49%), Query Frame = 2 
Query:  266 ELLESLDTGDLVLFDRPCLKMGGFFGAAVCAAAKVVGGSPFDHIGVVVKDENGLNLM-VEASFSGVAVRPLCERVRRSSASQICVRRLQADRSEEMRAEALRFASDVARVPYKEGGEGLLQMVAAAFRFHP-AKEQRRRVHAEAIALSTSIASLEREL 733
            +L +S+D+GD+VLF+R C  M  + GAA+C  AK    S +DH+G+VV+D +   L  +EA   GV +R L +RV +S++  I VRRL A R++E R +   FA  +   PY E G GLLQ   A F   P  K++R R+HA  I     +  ++REL
Sbjct:   18 QLPKSVDSGDIVLFNRRCTSMPPY-GAAICIVAKFFSNSKWDHVGIVVRDPDSKQLFFLEADLGGVKLRKLSDRVTKSNSHDIAVRRLSAMRTDEFRRQLWNFAQQMTGRPY-ETGSGLLQAAQAVF--DPLTKQERERLHALLIEKKEQLTDIQREL 171
[Close]
BLAST of mRNA_P-fluviatile_contig1.338.1 vs. uniprot
Match: A0A7S3E6T1_9RHOD (Hypothetical protein (Fragment) n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3E6T1_9RHOD)

HSP 1 Score: 100 bits (250), Expect = 1.500e-18
Identity = 65/158 (41.14%), Postives = 94/158 (59.49%), Query Frame = 2 
Query:  266 ELLESLDTGDLVLFDRPCLKMGGFFGAAVCAAAKVVGGSPFDHIGVVVKDENGLNLM-VEASFSGVAVRPLCERVRRSSASQICVRRLQADRSEEMRAEALRFASDVARVPYKEGGEGLLQMVAAAFRFHP-AKEQRRRVHAEAIALSTSIASLEREL 733
            +L +S+D+GD+VLF+R C  M  + GAA+C  AK    S +DH+G+VV+D +   L  +EA   GV +R L +RV +S++  I VRRL A R++E R +   FA  +   PY E G GLLQ   A F   P  K++R R+HA  I     +  ++REL
Sbjct:   18 QLPKSVDSGDIVLFNRRCTSMPPY-GAAICIVAKFFSNSKWDHVGIVVRDPDSKQLFFLEADLGGVKLRKLSDRVTKSNSHDIAVRRLSAMRTDEFRRQLWNFAQQMTGRPY-ETGSGLLQAAQAVF--DPLTKQERERLHALLIEKKEQLTDIQREL 171
[Close]
BLAST of mRNA_P-fluviatile_contig1.338.1 vs. uniprot
Match: A0A5J4YHF3_PORPP (Uracil catabolism protein 4 n=2 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YHF3_PORPP)

HSP 1 Score: 98.6 bits (244), Expect = 1.050e-17
Identity = 67/174 (38.51%), Postives = 98/174 (56.32%), Query Frame = 2 
Query:  218 SDGSGTDRP-PLAKEVEELLESLDTGDLVLFDRPCLKMGGFFGAAVCAAAKVVGGSPFDHIGVVVKD-ENGLNLMVEASFSGVAVRPLCERVRRSSASQICVRRLQADRSEEMRAEALRFASDVARVPYKEGGEGLLQMVAAAFRFHPAKEQRRRVHAEAIALSTSIASLEREL 733
            SDGS T  P P+     +L   LD+GD+VLF+R C KM   +   VCAAAK+V  S +DH+G+VVK  + G  L +EA F GV +R L ERV RS ++++ VRRL   RS+  R     FA+++   PY+     +++ V         K++R R+HA  +     +  + REL
Sbjct:   14 SDGSNTAIPVPIG--AAQLPAGLDSGDVVLFNRSCRKMK-IYAMLVCAAAKMVSNSRWDHVGMVVKHPDTGELLFLEADFGGVKLRSLAERVARSKSNEVAVRRLNIVRSDRDRRALYDFANEMLGTPYESAAGTMIKSVIDPL----GKQERERMHALLLEKKAQLREINREL 180
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.338.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
D8LLR0_ECTSI1.710e-10660.75Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5L9T0_9PHAE8.290e-10663.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZEA6_9STRA1.350e-2443.71Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A7S1NCK3_9EUGL1.130e-2247.79Hypothetical protein (Fragment) n=1 Tax=Eutreptiel... [more]
M1VD17_CYAM12.420e-2140.78Similar to mitochondrial calcium-dependent solute ... [more]
A0A6T6KN09_9RHOD4.100e-2040.88Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A7J7IKN1_9RHOD6.800e-2039.77Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
A0A7S2ZBK1_9RHOD1.260e-1841.14Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S3E6T1_9RHOD1.500e-1841.14Hypothetical protein (Fragment) n=3 Tax=Rhodosorus... [more]
A0A5J4YHF3_PORPP1.050e-1738.51Uracil catabolism protein 4 n=2 Tax=Porphyridium p... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:4105470..4111490 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score113.2
Seed ortholog evalue3.3e-22
Seed eggNOG ortholog45157.CMT592CT
KEGG koko:K10273,ko:K14684,ko:K15085
KEGG TC2.A.29.12.2,2.A.29.23
EggNOG free text desc.ATP transmembrane transporter activity
EggNOG OGsCOG0664@1,KOG0036@1,KOG0036@2759,KOG1113@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000,ko04121
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-04_004830.1
Exons6
Model size1653
Cds size1440
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815323.677852-CDS-P-fluviatile_contig1:4105469..41057211622815323.677852-CDS-P-fluviatile_contig1:4105469..4105721Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4105470..4105721 -
1693561495.379388-CDS-P-fluviatile_contig1:4105469..41057211693561495.379388-CDS-P-fluviatile_contig1:4105469..4105721Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4105470..4105721 -
1622815323.6905165-CDS-P-fluviatile_contig1:4106334..41070371622815323.6905165-CDS-P-fluviatile_contig1:4106334..4107037Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4106335..4107037 -
1693561495.3888068-CDS-P-fluviatile_contig1:4106334..41070371693561495.3888068-CDS-P-fluviatile_contig1:4106334..4107037Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4106335..4107037 -
1622815323.700329-CDS-P-fluviatile_contig1:4108072..41082391622815323.700329-CDS-P-fluviatile_contig1:4108072..4108239Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4108073..4108239 -
1693561495.3975925-CDS-P-fluviatile_contig1:4108072..41082391693561495.3975925-CDS-P-fluviatile_contig1:4108072..4108239Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4108073..4108239 -
1622815323.7148252-CDS-P-fluviatile_contig1:4109311..41094341622815323.7148252-CDS-P-fluviatile_contig1:4109311..4109434Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4109312..4109434 -
1693561495.4091668-CDS-P-fluviatile_contig1:4109311..41094341693561495.4091668-CDS-P-fluviatile_contig1:4109311..4109434Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4109312..4109434 -
1622815323.725378-CDS-P-fluviatile_contig1:4110347..41104751622815323.725378-CDS-P-fluviatile_contig1:4110347..4110475Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4110348..4110475 -
1693561495.4178402-CDS-P-fluviatile_contig1:4110347..41104751693561495.4178402-CDS-P-fluviatile_contig1:4110347..4110475Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4110348..4110475 -
1622815323.7351494-CDS-P-fluviatile_contig1:4111212..41112791622815323.7351494-CDS-P-fluviatile_contig1:4111212..4111279Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4111213..4111279 -
1693561495.4258204-CDS-P-fluviatile_contig1:4111212..41112791693561495.4258204-CDS-P-fluviatile_contig1:4111212..4111279Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4111213..4111279 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815323.7447479-UTR-P-fluviatile_contig1:4111279..41114901622815323.7447479-UTR-P-fluviatile_contig1:4111279..4111490Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 4111280..4111490 -
1693561498.3457596-UTR-P-fluviatile_contig1:4111279..41114901693561498.3457596-UTR-P-fluviatile_contig1:4111279..4111490Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 4111280..4111490 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.338.1prot_P-fluviatile_contig1.338.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig1 4105470..4111279 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig1.338.1

>prot_P-fluviatile_contig1.338.1 ID=prot_P-fluviatile_contig1.338.1|Name=mRNA_P-fluviatile_contig1.338.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=480bp
MMSDGSGTDRPPLAKEVEELLESLDTGDLVLFDRPCLKMGGFFGAAVCAA
AKVVGGSPFDHIGVVVKDENGLNLMVEASFSGVAVRPLCERVRRSSASQI
CVRRLQADRSEEMRAEALRFASDVARVPYKEGGEGLLQMVAAAFRFHPAK
EQRRRVHAEAIALSTSIASLERELSAHQAEGAAAAAGDDPNPAAVAIRER
LRRAITRRRKALVFLAAAATPEQTTPTISAPSPSLPPPSSSTATVAAQQC
PSSRPPPPPPPPLGTAPPHLLAHTKPQPPSPLPSPPTITLSSSSSSSSST
GTTTTTTTSTPPTTFQPQYDGGLFCSELVAALYQRLGLLDAPFPARHDYV
PADFAQSLGSPVEFLGATEDTASTTAGEDRGDSVGNAAPATVTVTGVSEE
EKSRKGQQRSNGEREQDVRVSASSLPPPIPEGGGRVALLKGATLGPGLWL
RSGSRLHPPPPSPPPSPPPPHDNEAEGRDG
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mRNA from alignment at P-fluviatile_contig1:4105470..4111490-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig1.338.1 ID=mRNA_P-fluviatile_contig1.338.1|Name=mRNA_P-fluviatile_contig1.338.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=6021bp|location=Sequence derived from alignment at P-fluviatile_contig1:4105470..4111490- (Porterinema fluviatile SAG_2381)
AAACCTTTCCTTCACTTGAAAAATGGGACGTGGCTAGCATGATATCATAG
AGGAGTGAGGACATGGCGTTGCCTGTGTGTGTGCTCTTTCGCTGTGCCCT
ATAGACAGCGCTGCATTGCGCCGCGTCCTCCATCCCAACCTTGATCTCAA
CGTCTCAACCCGTGCGTGCGTTTGCATGTTGATTTCGCATGCCTAGATCG
GAAAGGCGCAAATGATGAGCGATGGGAGCGGAACAGATCGTCCGCCCTTG
GCGAAGGAAGTCGAAGAGCTCCTAGAAAGTGCGTACGTTGCAGTGTCGGT
TCGAGTACAGTATTCGAACATTCGAACATTCGAAGGCGTCAATTACACCG
CCTTTTTGGCATTGCGCCGCTTGGAGATCGTAATTCCGAATTCACGTTCG
ATATCCGTGGCGTAGTTACATACCTCGCATGTCCCATTATGCTGACCAGC
CCCGTGACAGAAACTTCCGGGTGTGCCTGCGCAACTGAGTGTGGTGCCGT
GGGATCACTGAAATTGGGCGTTGCCGTGCGGCAGCACCTAGTAAGGTCGT
CGCTTCATCACACACCGACAATCGCCCGGATCTTTCACCATCACTCTCTC
GCTCTCTCCCGAGAGGAGCGCACAAAGAGCAAAAAATGTTTGCGCTTATG
CTTTGAGAAAAGCCGTCGAATCAAGAGTGTGGCCGTCGGTGGGATATACG
CCGACTTTCTTCCGCCCCGCACACGAGAGTTGGAATCCCTTTCATCATGT
CAAACGGGGTGGCCGAGGCTGGTCTGGTCCTGCCCAGGGTGCGCGCAGCG
TACCGTACCGTCCCACGACGTGCCGTGCCTTGTCGTAGCGTGCATACCTT
CTGCACTTACTCAGACGGTAATCCACGGTGTCCGACGCTCGCCACGCATG
CGGGCCCCGCACGATCCATGGCTTGACGCCCGCCCTGCACACGCTCCCCT
TTCCCTCCTCCCTTCACGCTCCTCCCCCCTCCATCCTCCCCCCCCCCTAC
TCCCCCCAATGGTAGGTCTAGATACGGGCGACCTGGTGCTCTTTGACCGG
CCATGCCTGAAAATGGGCGGATTTTTCGGAGCGGCGGTGTGCGCGGCAGC
CAAAGTCGTAGGTGGATCCCCGTTCGATCATATCGGTGTCGTGGTGAGGA
AGAGGAAGAGGAAGAGGAAGAGGAAAAGCGCAAAGGGGGTGGGCGATGGG
AAACAGGGGAGTGGGGGGGAGGCGGACAGGGGGGGGGTGTTCTCATAGTC
GTGCATGCCGTAGTTGTTAGACCATTGACCTCGCATCCCTACAAAGCCGG
GAAGGAGCACGCCGGGTTCTCACCGGACCAGGCTCAGGCCAGGCGGGCAG
GGGGAGAAGGGTAATGGAGGGGGGAAGGTGGTACTTAATATTACATGGCA
CAGACCCTAGAGAGAGTTCGGTCAACGCCGGGACGGGAACGCTACTCTTT
GCAAATGCTCAGTCTAACATAAGTTTCATTCCACTCTACCGCTTGCTCTA
AATTACCCCTATGGACGGCGGACCGTCTGTCATGTTTCTTTCCCGGAAGG
CAATGTACTCCGCGGGAAAAGGCGGGGCGGCTCCTGGGGCAGAGAGGGAA
GTGGGGGGTGGGAGCGGTACGCCCAAAGTGGGGAAGAGACAGAGGGGATA
AAGGGCAAACATTGTCGGCGGTGGAGCGGGTTCACTGTTGAAAGAGTTGA
GGCTGCTGCAATACGCGGAATGGCTTGGACTGAAGAGGAAATTGTAGATG
GCGGTCAAGAACCTCAAAACAGGCGGACCTCTTTCATTCACGTCATTCAC
GATAGGCTGTGGGGCCATGGACACCTCCCCAAGCGGATGTGTCTGCGCTT
GATTTGGCTTTGGCGGACAACTCTTCCCCCGAGCATCTTGAATCTGCCTG
TAGGTATGCGTGAAGCAGCCGCAGTTCAGTAGCTCGAACCGCGCTCAAAC
GTCCAAAGCCTTGAGAAACTCCATCGCGAACAGCACGTAATTTTAAACCC
TCGAAGTGAAAGCCACCCTTGCACATCTGTTTCCCCCCCATGGAAAACGC
TGTCAGGTGAAGGACGAGAACGGGCTGAACTTGATGGTGGAGGCCTCCTT
CAGCGGCGTCGCCGTGCGTCCCCTCTGTGAGCGGGTCAGGAGGAGCTCGG
CCTCACAGATCTGCGTCCGCCGGTTGCAGGTAGGTTGGAAGGGACGGAGA
AGAGAGAGCGAGACACGCGCATGAAAAATAGAGAGTGGACGTGCTGATAC
ATGTGCAGGTTTGTGCCGATTGCTGTCAATCAGATGCACTCTTCGGCGGA
AACCACAACTCCCATGTGAGGATTGTCCTGGGGAATGATCAAAGCGCATG
AATTCTTTGTTGCGGCGCCCTTTTTCAGCTGCCTGTTATACCGCTTACTT
CCTCGTCGGAGGCATCGCATTCGTCGGCTCCGGCACTCTCCAAGCCCACC
CACCGACATGTCTAAACAAGGCACACCGCCGGCTCTCGATCTTCTAGAGC
CTTTGTGTAGGCAGGTGTGCCTTGCCCGGTGAAAACCGAGGACGAAGTGC
CTCGTGAATCCTTCGGAACGCTTGCCCGACCTTCACTGCTAGTGTAAAGC
AGCAGAAAAAGGAAAACGACACTTTTTTCTCTTGAGAGTATGCCCGCGAG
CTCTCGTCTGGGTCAAAATTTCCTCACCGCGGTGCTCGGCTCGAGATTTC
ATGAGTAGCACGCCCCCGATGCCCTCCCCCCCTCCTCATGCCGTCCCCGT
GGCTGATAAGGTTGTTGTGGTACGAATGCAGGGCGCTATGCGCGTGGCAA
GAACGAGCCTCCTCAAAGTTTCTGCGTGAGACCGATTTGCAGAATCGCCA
TTTCCGCAGGTTCACCCCAATTTTTCGCGTCAAACATCAGAATGGTTGCA
TGAAACTTGGAGAACTTTTACAAATGACGGAATGTACATTCAAGCTGATC
ACTCTTCTGTCCTTTTTACACTGATTACATGATATGTGCGCAACGCGCAC
AGAAGCCAGCCCATGTGGGAGTGGAGAGCTAACAAAAACATCTCGTATCT
CCGCGGCTGCTGGACACCTGCCCCGACCCCCAGCCCACGTCGTGTTTCGG
AAAGAGCTGGTTCTTGATGTCCCCTTTTACTTCTCACTATCGCTCTCACG
AACACATGAATATGCGCGCAAGCGCGCTCTGTGCCCCCCCCCCTCCCCCA
ACTACATATCTTTGTTAAGTTCTTGATGTGACGTGTGACAAATGACGACA
GGCCGACCGATCCGAGGAGATGAGGGCCGAGGCGCTCCGGTTCGCGTCGG
ACGTGGCCCGGGTCCCCTACAAGGAGGGCGGCGAGGGCTTGCTGCAGATG
GTGGCGGCGGCATTTCGCTTCCACCCGGCCAAGGAGCAGAGGAGACGAGT
CCATGCCGAGGCCATTGCGTGAGTGTGGTGCGGTGAAACGGGATCGGGTG
ATGGTTTTTGCCAGTAGCGGTAGCCGCGGCAGCGGCGGCGCAAGCACCAC
CATCACCAGCAGCAGGTAAAGTAGCAGCAGCAGCAGTAGAAATAGCAATA
ACAGTAGCAGCGGCGGATCAGCAGCACCGAATCAGCGGGCGTGTCATTGC
GCTATTTGTGCGGGCTGTGGGCGTGTATGCCCGTGGGCGGAGGGGCGGGG
GGGGGGGCAGGGGGGGGGTTTGCGGCGGTGCCGCTCGCTCGTTGTGCTTG
CTCTTTTTTGGCGTGAGAACGGGGCCCCAGCTCCAAATCTGGAATAACAC
AGCTCCAGCGGCGCGACTTGGCGCCGATTTTAGTTTCTCTCTAGCCGCAC
TTGTAATTACCCGTCGACGTTTACTTATGTGTGCGTGTGTATGTCTCGGT
AGTTAATCTACGGTACGAAAGTTTTGGTTGCCTGCGCCCCTTCTTATCGC
TCCCCCTCCTGGCAGATTTAAAGGTCAAATTTAGAACGGGCGACATTGAC
CTTCGGGAACGTAGAAGGAGGTTGAGGAAGGTAGACGACGACGAAGACAA
GTTCAAATGTGACTGCGGTGCCGAATGCGTAAACCGGGTACATGTAGTTG
CGGAATGCCCGTTATACGATCAGGAGAGAGAAGGGTACATGGTTGAGCTG
GAAAAAGTAGACAGTCGGTATAGAGAGAAGTTTAAGGCATGGAACAAAGA
GAAGACGGTAGCGGTACTCGGGTGTAAGATGTGGCCCAGGAAGGACAGGA
ATAAAGTAGACAGGTTAGGGAAAACATTTTTGAGCCACCTCTGGCAAAGT
AGGAAGGAACGATTGGCCATCGGCGATCGATCCTGCGGGAACAATGCTCC
GTCCTCTCGAGGACGCGTGGTCAATGGTCTAACAACGAAGGCATGCAAAA
CACGAGTACGCCCCCCCCCCCCTCCTGGCAGATTTGTCGACGGCCGCTGC
TGTCTCCTTTCTTGTCGTTTTTTTGTTTTGTTTGTTCTTTCCTCCGCGTG
CAGGCTGTCGACGTCGATCGCGAGCCTAGAGAGGGAGTTGTCCGCCCATC
AGGCAGAAGGGGCGGCGGCAGCGGCGGGCGACGATCCAAACCCGGCGGCA
GTGGCCATCCGGGAGCGCCTCCGGCGGGCCATCACGCGACGGCGAAAGGC
CTTGGTCTTCCTCGCTGCCGCCGCCACACCGGAACAGACAACGCCGACGA
TATCGGCGCCATCGCCTTCGCTGCCGCCGCCGTCATCGTCAACAGCGACG
GTAGCAGCGCAACAATGCCCATCCAGCCGCCCTCCTCCTCCTCCTCCTCC
CCCTCTCGGCACGGCCCCGCCGCATCTGTTAGCCCACACAAAACCACAAC
CACCCTCACCTTTGCCTTCTCCTCCGACCATAACCCTCTCCTCCTCCTCC
TCCTCCTCCTCTTCCACCGGCACGACAACGACGACGACAACTTCTACGCC
GCCAACAACGTTCCAGCCACAGTACGACGGCGGCCTGTTCTGCTCAGAGC
TGGTGGCGGCCCTCTACCAGAGGCTGGGGCTGCTGGACGCGCCCTTCCCC
GCCCGACACGATTACGTCCCCGCCGACTTCGCACAGTCGCTCGGGAGTCC
GGTGGAATTCCTGGGTGCCACCGAAGACACGGCCTCCACCACGGCCGGCG
AGGACAGAGGGGACTCCGTGGGGAACGCCGCCCCTGCCACCGTGACCGTG
ACTGGGGTGAGGCAGATAGACAGATCCAACGCACAGCTTTTGCTTCCTCT
CCTTTTTTGGCTTTTGTGCGCCGCTCTTTGTTGTTGTTTGTGGTTTCTCG
GTGGGAGTGTTCGCGAAAAGAGGAAGCACAAACAATGCTGGGAAGTGTGC
ACCAGAGGAAATGGATGCTCATGTGGCTTTTTGAAGCGCAAATGTCGGGT
ATCCTGTTGCCCACGAGAGACTGCTCGAAAAATGTGCGTGGGTTGTAGCT
TCGAAGCGCAGACGGGCACTCCTTTGCGGCGAGGGACGCACGCTAGCCAT
CGCCCCACTCTTTGTGGTCGACGGGACAGCGGAGCGTGCGACCGAGGCCT
CAGTATGTACAACGTGCAAAAAGTCGGAGTATGCAGTTGCGCTTGACCCA
CTCATCGCCATGCTCATGTTCGTGTAGATGGAAAAGCGATGGACACCATC
AAAGGATGACGATAGACTAGGAGGTGTGTTCCGGAGTTCGTGGCGTTCCC
AACCTCCCCACCAGACCCCCCAGCCTCCCCCTCATTTGCGCCCCCTCGCT
CTCCGCGTGCCTGCGTCCCTGTATGCCCGGGTGGAAACCTCCGTGGCTGC
CGTTGTAAAAACAACGCAGGTGTCTGAGGAGGAGAAATCTCGGAAGGGAC
AACAACGCTCGAATGGCGAGAGAGAGCAGGACGTCCGCGTGTCGGCGTCG
TCGCTGCCTCCCCCGATCCCGGAGGGAGGCGGGCGGGTCGCCCTGCTCAA
AGGCGCGACGCTCGGCCCGGGGCTTTGGCTTCGCAGTGGCTCGCGGTTGC
ATCCCCCGCCGCCGTCGCCGCCGCCGTCGCCGCCGCCGCCCCACGACAAT
GAGGCAGAAGGGCGGGACGGC
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Coding sequence (CDS) from alignment at P-fluviatile_contig1:4105470..4111490-

>mRNA_P-fluviatile_contig1.338.1 ID=mRNA_P-fluviatile_contig1.338.1|Name=mRNA_P-fluviatile_contig1.338.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2880bp|location=Sequence derived from alignment at P-fluviatile_contig1:4105470..4111490- (Porterinema fluviatile SAG_2381)
ATGATGAGCGATGGGAGCGGAACAGATCGTCCGCCCTTGGCGAAGGAAGT
CGAAGAGCTCCTAGAAAATGATGAGCGATGGGAGCGGAACAGATCGTCCG
CCCTTGGCGAAGGAAGTCGAAGAGCTCCTAGAAAGTCTAGATACGGGCGA
CCTGGTGCTCTTTGACCGGCCATGCCTGAAAATGGGCGGATTTTTCGGAG
CGGCGGTGTGCGCGGCAGCCAAAGTCGTAGGTGGATCCCCGTTCGATCAT
ATCGGTGTCGTGGTCTAGATACGGGCGACCTGGTGCTCTTTGACCGGCCA
TGCCTGAAAATGGGCGGATTTTTCGGAGCGGCGGTGTGCGCGGCAGCCAA
AGTCGTAGGTGGATCCCCGTTCGATCATATCGGTGTCGTGGTGAAGGACG
AGAACGGGCTGAACTTGATGGTGGAGGCCTCCTTCAGCGGCGTCGCCGTG
CGTCCCCTCTGTGAGCGGGTCAGGAGGAGCTCGGCCTCACAGATCTGCGT
CCGCCGGTTGCAGGTGAAGGACGAGAACGGGCTGAACTTGATGGTGGAGG
CCTCCTTCAGCGGCGTCGCCGTGCGTCCCCTCTGTGAGCGGGTCAGGAGG
AGCTCGGCCTCACAGATCTGCGTCCGCCGGTTGCAGGCCGACCGATCCGA
GGAGATGAGGGCCGAGGCGCTCCGGTTCGCGTCGGACGTGGCCCGGGTCC
CCTACAAGGAGGGCGGCGAGGGCTTGCTGCAGATGGTGGCGGCGGCATTT
CGCTTCCACCCGGCCAAGGAGCAGAGGAGACGAGTCCATGCCGAGGCCAT
TGCGCCGACCGATCCGAGGAGATGAGGGCCGAGGCGCTCCGGTTCGCGTC
GGACGTGGCCCGGGTCCCCTACAAGGAGGGCGGCGAGGGCTTGCTGCAGA
TGGTGGCGGCGGCATTTCGCTTCCACCCGGCCAAGGAGCAGAGGAGACGA
GTCCATGCCGAGGCCATTGCGCTGTCGACGTCGATCGCGAGCCTAGAGAG
GGAGTTGTCCGCCCATCAGGCAGAAGGGGCGGCGGCAGCGGCGGGCGACG
ATCCAAACCCGGCGGCAGTGGCCATCCGGGAGCGCCTCCGGCGGGCCATC
ACGCGACGGCGAAAGGCCTTGGTCTTCCTCGCTGCCGCCGCCACACCGGA
ACAGACAACGCCGACGATATCGGCGCCATCGCCTTCGCTGCCGCCGCCGT
CATCGTCAACAGCGACGGTAGCAGCGCAACAATGCCCATCCAGCCGCCCT
CCTCCTCCTCCTCCTCCCCCTCTCGGCACGGCCCCGCCGCATCTGTTAGC
CCACACAAAACCACAACCACCCTCACCTTTGCCTTCTCCTCCGACCATAA
CCCTCTCCTCCTCCTCCTCCTCCTCCTCTTCCACCGGCACGACAACGACG
ACGACAACTTCTACGCCGCCAACAACGTTCCAGCCACAGTACGACGGCGG
CCTGTTCTGCTCAGAGCTGGTGGCGGCCCTCTACCAGAGGCTGGGGCTGC
TGGACGCGCCCTTCCCCGCCCGACACGATTACGTCCCCGCCGACTTCGCA
CAGTCGCTCGGGAGTCCGGTGGAATTCCTGGGTGCCACCGAAGACACGGC
CTCCACCACGGCCGGCGAGGACAGAGGGGACTCCGTGGGGAACGCCGCCC
CTGCCACCGTGACCGTGACTGGGGCTGTCGACGTCGATCGCGAGCCTAGA
GAGGGAGTTGTCCGCCCATCAGGCAGAAGGGGCGGCGGCAGCGGCGGGCG
ACGATCCAAACCCGGCGGCAGTGGCCATCCGGGAGCGCCTCCGGCGGGCC
ATCACGCGACGGCGAAAGGCCTTGGTCTTCCTCGCTGCCGCCGCCACACC
GGAACAGACAACGCCGACGATATCGGCGCCATCGCCTTCGCTGCCGCCGC
CGTCATCGTCAACAGCGACGGTAGCAGCGCAACAATGCCCATCCAGCCGC
CCTCCTCCTCCTCCTCCTCCCCCTCTCGGCACGGCCCCGCCGCATCTGTT
AGCCCACACAAAACCACAACCACCCTCACCTTTGCCTTCTCCTCCGACCA
TAACCCTCTCCTCCTCCTCCTCCTCCTCCTCTTCCACCGGCACGACAACG
ACGACGACAACTTCTACGCCGCCAACAACGTTCCAGCCACAGTACGACGG
CGGCCTGTTCTGCTCAGAGCTGGTGGCGGCCCTCTACCAGAGGCTGGGGC
TGCTGGACGCGCCCTTCCCCGCCCGACACGATTACGTCCCCGCCGACTTC
GCACAGTCGCTCGGGAGTCCGGTGGAATTCCTGGGTGCCACCGAAGACAC
GGCCTCCACCACGGCCGGCGAGGACAGAGGGGACTCCGTGGGGAACGCCG
CCCCTGCCACCGTGACCGTGACTGGGGTGTCTGAGGAGGAGAAATCTCGG
AAGGGACAACAACGCTCGAATGGCGAGAGAGAGCAGGACGTCCGCGTGTC
GGCGTCGTCGCTGCCTCCCCCGATCCCGGAGGGAGGCGGGCGGGTCGCCC
TGCTCAAAGGCGCGACGCTCGGCCCGGGGCTTTGGCTTCGCAGTGGCTCG
CGGTTGCATCCCCCGCCGCCGTCGCCGCCGCCGTCGCCGCCGCCGCCCCA
CGACAATGAGGCAGAAGGGCGGGACGGCGTGTCTGAGGAGGAGAAATCTC
GGAAGGGACAACAACGCTCGAATGGCGAGAGAGAGCAGGACGTCCGCGTG
TCGGCGTCGTCGCTGCCTCCCCCGATCCCGGAGGGAGGCGGGCGGGTCGC
CCTGCTCAAAGGCGCGACGCTCGGCCCGGGGCTTTGGCTTCGCAGTGGCT
CGCGGTTGCATCCCCCGCCGCCGTCGCCGCCGCCGTCGCCGCCGCCGCCC
CACGACAATGAGGCAGAAGGGCGGGACGGC
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