mRNA_P-fluviatile_contig1.337.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig1.337.1 vs. uniprot
Match: A0A6H5L6T1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6T1_9PHAE) HSP 1 Score: 628 bits (1620), Expect = 2.140e-189 Identity = 588/1187 (49.54%), Postives = 646/1187 (54.42%), Query Frame = 2
Query: 2 SSFPVGPXXXXXXXXALGASAWWRRGSAQNRLRRLEALRASLPVDVMFQTLAMGQAFNPERSLRAVRSVYNDPSGR--VVLGSGRTIPAEFFRPGGG-LVQSNRDGGSSGXXGAGFIAPGTLSTADLNTTGXXXXXXXXX---------------AWGEGMGVMSMEDGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGVGM--SQAELRRGSFQSNASVDFGLLSVCGDESVLDSEEYGLWAAFMNPDSPAFSPCPSPSANGASATETLAGGRGGGREESARDGPADTCSHSPSYQTLSELLSTNANAATAYDCDRSDDGG--DSAAAAGSTLLHDPHQEQSLSPLA----ADFSELKHEF-DDRDRGRLLSGGEAESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDSACVSINGGCSV-------RIDGVSGSATPTAMEGAGGQEGKGVPVPGAVLAAQNAAASAKAAAAE---------------RRGFIGDEQKRARFNEFVTGFLSMTLFQAADLWLPLASGSGGGSGGD------------KVSRLFLYSSHVQDPALAKWSSLSRNVVLASGVGLPGIVFQEHRPQWAVDYSQVDPERNPLASVARLLGIGSAFGVPLSIGPDNDDCGVLMLYSVSCLPPSELMVEFMERATRLLLADAPAPTMLVQQFRDKLPSAKDIGRVAGAYQHHAMWAEHQMRSTNMASGGAGGVGGSGRGSGISRRRRSXXXGISGTLLHNLF-SQDGSNGGGSSIRSNMRSSPE--------------LKAALAEMGPAATGWGGDGSALAVAAMAXXXXXQGGGFRPDGGAVAFVPPPDWR--GNQASPPPFLFNRVDLDSRPSVVDQNSPAAAAA-------------VASLDAASPGGRAGGSHNIMSKETGXXXXXREGGALRGAAGRKLWAGLAPGAAATVAIADSAAGAGKSKLKARRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTLSSGGHPAGQPSTSPARAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVLSPAPDVATA-------------ACRAPGCSNSPNGRTPFCWDHWSAARQCQHAGCDKLSQGNTRLCIAHGGGRRCTHPGCNKGARDRFFXXXXXXXXXXXXXXXXXAAVGGSDL 3250
SSFPVGP AL AS WRRGSAQ RLRRL+ALRASLPVDVMFQTLAMG+ NPERSLRAVRSVYND GR VV+G+G +IPAEFFRPGGG L+ NR GG FI+ G L+T+D+NT G XXX + G XXXXXXXXXXXXXXXXXXXXXX GGVG SQ +RGSFQSNASVDFGL S+ DE +LDSEEY LWAAFM PDSP SP PSPS+ G S G G R+ G A C S SYQTLSELLSTN D D GG D AAA ADF LK E D+ + EAE+ A +INGG + R+ S ++ T G G RRGF+GDEQKR RF+EF+ GFLSM+LFQAAD+WLPL+ G G GD KVSRLFLY+S VQDPALAKWSSLSRNVVLASGVGLPGIVF+E RPQWAVDYSQVD ERNPLASVARLLGIGSAFGVPLS+G D ++CGVLMLYS+SCLPPSELMVEFMER+TRLLL D PAPT +VQQFRD PSAKDIGRVAGAYQHHA+WAEH +RS + G GG RR G+ G+L NL SQDGS L AAL + AA W GD +AL XXXXX G++AS PFLFNR+DLDSRP V + N VASLD+ G+AG S + + G +GG KLWA G AT XXXXXXXXXXXXXXXXXXXX+ ++G AG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ACRAPGC+N PNGRTPFCWDHWSAARQCQHAGCDKLSQGNTRLCIAHGGGRRCTHPGCNKGARDRFFXXXXXXXXXXXXXXXXXAAVGGSDL
Sbjct: 127 SSFPVGPAPPPPKV-ALRASPAWRRGSAQKRLRRLDALRASLPVDVMFQTLAMGEMPNPERSLRAVRSVYNDAGGRHRVVVGAGGSIPAEFFRPGGGGLMVGNRSGGR-------FISSGALTTSDINTRGGTAFGGXXXXXXXXXNAKRPMTPLSLGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGWLVLPGEEGGVGGEGSQTPGKRGSFQSNASVDFGL-SIGSDEGLLDSEEYSLWAAFMKPDSPPLSPAPSPSSQGFSVKSLDKAGEG--RDGGVGSGQAKPCRRSTSYQTLSELLSTNVGTPGISDDDDGSSGGVRDDAAAXXEXXXXXXXXXXXXXXXXXXXXADFLGLKQELVDESPLKQEYDKDEAEASWG------------------------------------------------GAAAAINGGRQMYSIQTEKRMFPTSETSASTTAAGFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRGFVGDEQKRKRFDEFILGFLSMSLFQAADIWLPLSRNGGSGREGDPAAPAAGSKGNKKVSRLFLYNSKVQDPALAKWSSLSRNVVLASGVGLPGIVFRERRPQWAVDYSQVDSERNPLASVARLLGIGSAFGVPLSLGAD-EECGVLMLYSMSCLPPSELMVEFMERSTRLLLEDGPAPTTVVQQFRDNPPSAKDIGRVAGAYQHHALWAEHHVRSNGINGVGVGGT-----------RRSGGGEGVPGSLAANLLLSQDGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLMAALPKC--AAADWSGDRAALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPGSKASSAPFLFNRIDLDSRPPVAENNGRGPPVPXXXXXXXXXXXXXVASLDSEPAAGKAGWSSPAAAMQYGGGAATAQGGV------GKLWA---SGRGATTTAGXX-------------------------XXXXXXXXXXXXXXXXXXXXRRAAAGRAEAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACRAPGCTNPPNGRTPFCWDHWSAARQCQHAGCDKLSQGNTRLCIAHGGGRRCTHPGCNKGARDRFFXXXXXXXXXXXXXXXXXAAVGGSDL 1206
BLAST of mRNA_P-fluviatile_contig1.337.1 vs. uniprot
Match: D8LLR1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLR1_ECTSI) HSP 1 Score: 366 bits (940), Expect = 2.680e-107 Identity = 289/508 (56.89%), Postives = 319/508 (62.80%), Query Frame = 2
Query: 560 GVGMSQAELRRGSFQSNASVDFGLLSVCGDESVLDSEEYGLWAAFMNPDSPAFSPCPSPSANGASATETLAGGRGGGREESARDGPADTCSHSPSYQTLSELLSTNANAATAYDCDRSDDGGDSAAAA--GSTLLHDPHQEQSLSPLAADFSELKHEFDDRDRGRLLSGGEAESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDSACVSINGGCSVRIDGVSGSATPTAMEGAGGQEGKGVPVPGAVLAAQNAAASAKAAAAERRGFIGDEQKRARFNEFVTGFLSMTLFQAADLWLPLASGSG---------------GGSGGDKVSRLFLYSSHVQDPALAKWSSLSRNVVLASGVGLPGIVFQEHRPQWAVDYSQVDPERNPLASVARLLGIGSAFGVPLSIGPDNDDCGVLMLYSVSCLPPSELMVEFMERATRLLLADAPAPTMLVQQFRDKLPSAKDIGRVAGAYQHHAMWAEHQMRSTNM 2032
G G SQ +RGSFQSNASVDFGL + DE +LDSEEY LWAAFM PDSP SP PSP + G S E+L GG RDG A + + + E L YD D ++ G AAAA G +H SL P R+ S E +XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ERRGF+GDEQKR RF+EF+ GFLSM+LFQAAD+WLPL+S +G GG G KVSRLFLYSS VQDPALAKWSSLSRNVVLASGVGLPGIVF+E RPQWAVDYSQVD ERNPLASVARLLGIGSAFGVPLS+G + D+CGVLMLYS+SCLPPSELMVEFMER+TRLLL D PAPT +VQQFRD PSAKDIGRVAGAYQHHA+WAEH +RS +
Sbjct: 14 GGGGSQTPRKRGSFQSNASVDFGL-TTGADEGLLDSEEYSLWAAFMKPDSPPLSPAPSPGSQGFS-VESLDKAGGG------RDGGAGS-------EFVDESLLKQE-----YDKDEAEAGWGGAAAAVDGGRQIH------SLQP----------------EKRMFSASETSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV--------------------------------------------------------------ERRGFVGDEQKRKRFDEFILGFLSMSLFQAADIWLPLSSRNGXXXXXRDGDPAAEAAGGKGNKKVSRLFLYSSKVQDPALAKWSSLSRNVVLASGVGLPGIVFRERRPQWAVDYSQVDSERNPLASVARLLGIGSAFGVPLSLGAE-DECGVLMLYSMSCLPPSELMVEFMERSTRLLLEDGPAPTTVVQQFRDNPPSAKDIGRVAGAYQHHALWAEHHVRSNGI 416
BLAST of mRNA_P-fluviatile_contig1.337.1 vs. uniprot
Match: A0A7S2V7E5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V7E5_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 2.230e-7 Identity = 49/145 (33.79%), Postives = 63/145 (43.45%), Query Frame = 2
Query: 1415 FIGDEQKRARFNEFVTGFLSMTLFQAADLWLPLASGSGGGSGGDKVSRLFLYSSHVQDPALAKWSSLSRNVVLASGVGLPGIVFQEHRPQWAVDYSQ-----------------VDPER-----NPLASVARLLGIGSAFGVPLS 1783
F+ D+ KR RF EFV GFL M++FQ A+ WLP K +L L DP L W +L+ + G GL G V Q Q D S + R + AS AR+LGI +AF VPL+
Sbjct: 13 FLRDDSKRIRFQEFVDGFLGMSIFQVAECWLP-----------GKNGKLHLAFCLAHDPELHIWHTLNVKHRVNPGEGLVGTVLQTVIQQRQEDASNSLSKMLSAAVWDNSGKILSGSRGGDVTDTRASSARILGINAAFAVPLA 146
BLAST of mRNA_P-fluviatile_contig1.337.1 vs. uniprot
Match: A0A7S2KTT1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KTT1_9STRA) HSP 1 Score: 61.6 bits (148), Expect = 5.750e-7 Identity = 41/56 (73.21%), Postives = 46/56 (82.14%), Query Frame = 2
Query: 3083 SQGNTRLCIAHGGGRRCTHPGCNKGARDRFFXXXXXXXXXXXXXXXXXAAVGGSDL 3250
+QG TR CIAHGGGRRCT PGC+KGARD+F XXXXXXXXXXX +AVGGS+L
Sbjct: 1 AQGPTRFCIAHGGGRRCTFPGCDKGARDKFXXXXXXXXXXXXNSECCKSAVGGSNL 56
BLAST of mRNA_P-fluviatile_contig1.337.1 vs. uniprot
Match: A0A835ZHF7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHF7_9STRA) HSP 1 Score: 61.6 bits (148), Expect = 1.010e-6 Identity = 25/30 (83.33%), Postives = 28/30 (93.33%), Query Frame = 2
Query: 3083 SQGNTRLCIAHGGGRRCTHPGCNKGARDRF 3172
+QG+T+ CIAHGGGRRCTHPGC KGARDRF
Sbjct: 1 AQGSTQFCIAHGGGRRCTHPGCTKGARDRF 30
BLAST of mRNA_P-fluviatile_contig1.337.1 vs. uniprot
Match: A0A7S1YMZ4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YMZ4_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 1.840e-6 Identity = 55/190 (28.95%), Postives = 88/190 (46.32%), Query Frame = 2
Query: 1418 IGDEQKRARFNEFVTGFLSMTLFQAADLWLPLASGSGGGSGGDKVSRLFLYSSHVQDPALAKWSSLSRNVVLASGVGLPGIVFQEHRPQWAVD-YSQVDPERNPLASVARLLGIGSAFGVPL-SIGPDNDDCGVLMLYSVSCLPPSELMVEFMERATRLLLA--DAPAPTMLVQQFRDKLPSAKDIGRVA 1975
I + K+ R EF + FL M++F AAD+W+P+ G D +S + ++ AL+ +S LS + + S G G F P W + + VD ER + + I S +P+ S G C V YS+ P ++ F+++A RLL A D P + V + +A D+G +A
Sbjct: 373 ILERVKQDRLEEFASAFLGMSVFDAADIWIPMT-----GESMDVLSHVTSITTSAGGDALSNFSLLSEGLAIQSWSGAVGRAFASGNPVWTSNKHIFVDKER---VTAFAITNIQSVVAIPIMSPGTVTPVC-VFSCYSLVKSDPVPFVLRFVQQALRLLWAGLDRVQPHVAVGETLWTNVAAADLGEMA 553
BLAST of mRNA_P-fluviatile_contig1.337.1 vs. uniprot
Match: A0A7S2E348_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2E348_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 3.580e-6 Identity = 46/96 (47.92%), Postives = 52/96 (54.17%), Query Frame = 2
Query: 2957 PDVATAACRAPGCSNSPNGRTPFCWDHWSAARQCQHAGCDKLSQGNTRLCIAHGGGRRCTHPGCNKGARDRFFXXXXXXXXXXXXXXXXXAAVGGS 3244
P CR GC R+P+C H + R+C A GGRRCTHPGC +GARDR+FXXXXXXXXXXXX AAVGGS
Sbjct: 1041 PSEPPKCCRMAGCDVKAGRRSPYCISHMGSQRRCSFAXXXXXXXXXXXXXXXXXGGRRCTHPGCTRGARDRYFXXXXXXXXXXXXDECFKAAVGGS 1136 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.337.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig1.337.1 >prot_P-fluviatile_contig1.337.1 ID=prot_P-fluviatile_contig1.337.1|Name=mRNA_P-fluviatile_contig1.337.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1305bp MFQTLAMGQAFNPERSLRAVRSVYNDPSGRVVLGSGRTIPAEFFRPGGGLback to top mRNA from alignment at P-fluviatile_contig1:4092908..4104048+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig1.337.1 ID=mRNA_P-fluviatile_contig1.337.1|Name=mRNA_P-fluviatile_contig1.337.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=11141bp|location=Sequence derived from alignment at P-fluviatile_contig1:4092908..4104048+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig1:4092908..4104048+ >mRNA_P-fluviatile_contig1.337.1 ID=mRNA_P-fluviatile_contig1.337.1|Name=mRNA_P-fluviatile_contig1.337.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=7830bp|location=Sequence derived from alignment at P-fluviatile_contig1:4092908..4104048+ (Porterinema fluviatile SAG_2381)back to top |