mRNA_P-fluviatile_contig1.329.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig1.329.1
Unique NamemRNA_P-fluviatile_contig1.329.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig1.329.1 vs. uniprot
Match: D8LLR9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLR9_ECTSI)

HSP 1 Score: 134 bits (338), Expect = 3.390e-28
Identity = 142/340 (41.76%), Postives = 178/340 (52.35%), Query Frame = 3 
Query:  912 GGDGG--SGDGMWDFGDETSDDEPENVGGVVATVNTEKRKCHADGGAGQQGRQQSCGEENGGSDGMGAAPRSLAIGVEGGRGRGGDEITTDEQQQARVVVDRLGRRKHAPKR-ASSTSSSDDFDGWGDDGDGRDEXXXXXXXXXXXXXXXXXXEGNADVYDWTVVNTEDEGALEGGNLGDADSMRNASEGSASERNK-----TRLKAEVNPLASKLGLGSGVPRTAMPPAVMAAMESLQ-RQGRGLGRPPGSVR--------GAKGAVLGRGGRPRYFPLMQGQPQHLYPQGRPPAVASGGENIFAGGG------------AAAPPSEGIVANHQLVPSA 1844
            GG+GG  S D  WDFG E S+DEPE  G  VA  +      H+   A  + +Q                P +  +    G   G ++   +E+QQ +VVVDRLGRR++ P R  SS+SS D+FDGWGD       XXXXXXXXXXXXXXXXX +GN  VYDWTV++T D G+L+G  +G+ D  R  S+GS  + +K      + +AE NPLASKLGLG+ VPR AMPPA+ AA   +  +QG G G               G K    GRGGRPRY PLMQ          RP   A  G  +  G G            A APP  G VA  Q+  +A
Sbjct:  281 GGEGGNSSSDDKWDFG-EDSEDEPEADGMEVAAGDGRDGSRHSGRNAHHEPQQHH-------------HPAATPVSAVSGHNDGRNDSNAEEKQQVKVVVDRLGRRQNVPARDLSSSSSEDEFDGWGD----XXXXXXXXXXXXXXXXXXXXIDGN--VYDWTVMDTGD-GSLDG-EIGEMDDPRKPSDGSVGDGSKPASSTAKPRAEANPLASKLGLGASVPRVAMPPAMTAAAAHIPLQQGPGRGXXXXXXXXXXXXXXXGYKTVAPGRGGRPRYSPLMQMAAAVTNNHPRPGPSAPNGGRVGPGAGSTPTGTRNPDSGAGAPPGAGAVATTQVATTA 598
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.329.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LLR9_ECTSI3.390e-2841.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:3994639..4000151 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score142.1
Seed ortholog evalue8.2e-31
Seed eggNOG ortholog2880.D8LLR9
Preferred namespnA
KEGG koko:K01090,ko:K07359,ko:K14803,ko:K17500
KEGG Pathwayko04140,ko04152,ko04211,ko04920,ko04921,ko05034,map04140,map04152,map04211,map04920,map04921,map05034
GOsGO:0000166,GO:0000287,GO:0001101,GO:0001726,GO:0001882,GO:0001883,GO:0002682,GO:0002697,GO:0002831,GO:0003674,GO:0003824,GO:0004721,GO:0004722,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006355,GO:0006357,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006970,GO:0008150,GO:0008152,GO:0009414,GO:0009415,GO:0009628,GO:0009651,GO:0009653,GO:0009719,GO:0009725,GO:0009737,GO:0009889,GO:0009987,GO:0010033,GO:0010035,GO:0010468,GO:0010556,GO:0016020,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0017076,GO:0019001,GO:0019219,GO:0019222,GO:0019538,GO:0030145,GO:0030154,GO:0031252,GO:0031323,GO:0031326,GO:0031347,GO:0032101,GO:0032502,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0033554,GO:0033993,GO:0035639,GO:0036094,GO:0036211,GO:0042221,GO:0042578,GO:0042995,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043618,GO:0043620,GO:0043900,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0048583,GO:0048856,GO:0048869,GO:0050688,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0051716,GO:0060255,GO:0061392,GO:0061416,GO:0065007,GO:0071214,GO:0071470,GO:0071472,GO:0071704,GO:0080090,GO:0080134,GO:0097159,GO:0097305,GO:0097367,GO:0104004,GO:0120025,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901700,GO:1903506,GO:2000112,GO:2001141
EggNOG free text desc.peptidyl-threonine phosphorylation
EggNOG OGsCOG0631@1,KOG0585@1,KOG0585@2759,KOG0698@2759
EC2.7.11.17,3.1.3.16
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001,ko01009,ko03009
Hectar predicted targeting categoryother localisation
Exons6
Model size2920
Cds size1779
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.329.1prot_P-fluviatile_contig1.329.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig1 3995148..3999519 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815266.4653265-UTR-P-fluviatile_contig1:3994638..39951471622815266.4653265-UTR-P-fluviatile_contig1:3994638..3995147Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 3994639..3995147 -
1693561300.9486861-UTR-P-fluviatile_contig1:3994638..39951471693561300.9486861-UTR-P-fluviatile_contig1:3994638..3995147Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 3994639..3995147 -
1622815266.5620637-UTR-P-fluviatile_contig1:3999519..40001511622815266.5620637-UTR-P-fluviatile_contig1:3999519..4000151Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 3999520..4000151 -
1693561302.4191434-UTR-P-fluviatile_contig1:3999519..40001511693561302.4191434-UTR-P-fluviatile_contig1:3999519..4000151Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 3999520..4000151 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815266.4755976-CDS-P-fluviatile_contig1:3995147..39953621622815266.4755976-CDS-P-fluviatile_contig1:3995147..3995362Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3995148..3995362 -
1693561301.4610825-CDS-P-fluviatile_contig1:3995147..39953621693561301.4610825-CDS-P-fluviatile_contig1:3995147..3995362Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3995148..3995362 -
1622815266.4871619-CDS-P-fluviatile_contig1:3995953..39964431622815266.4871619-CDS-P-fluviatile_contig1:3995953..3996443Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3995954..3996443 -
1693561301.7115185-CDS-P-fluviatile_contig1:3995953..39964431693561301.7115185-CDS-P-fluviatile_contig1:3995953..3996443Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3995954..3996443 -
1622815266.5043824-CDS-P-fluviatile_contig1:3996821..39971201622815266.5043824-CDS-P-fluviatile_contig1:3996821..3997120Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3996822..3997120 -
1693561302.3729494-CDS-P-fluviatile_contig1:3996821..39971201693561302.3729494-CDS-P-fluviatile_contig1:3996821..3997120Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3996822..3997120 -
1622815266.5203092-CDS-P-fluviatile_contig1:3997523..39976901622815266.5203092-CDS-P-fluviatile_contig1:3997523..3997690Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3997524..3997690 -
1693561302.3864923-CDS-P-fluviatile_contig1:3997523..39976901693561302.3864923-CDS-P-fluviatile_contig1:3997523..3997690Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3997524..3997690 -
1622815266.5348985-CDS-P-fluviatile_contig1:3997876..39983341622815266.5348985-CDS-P-fluviatile_contig1:3997876..3998334Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3997877..3998334 -
1693561302.3975334-CDS-P-fluviatile_contig1:3997876..39983341693561302.3975334-CDS-P-fluviatile_contig1:3997876..3998334Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3997877..3998334 -
1622815266.550424-CDS-P-fluviatile_contig1:3999369..39995191622815266.550424-CDS-P-fluviatile_contig1:3999369..3999519Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3999370..3999519 -
1693561302.4076862-CDS-P-fluviatile_contig1:3999369..39995191693561302.4076862-CDS-P-fluviatile_contig1:3999369..3999519Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3999370..3999519 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig1.329.1

>prot_P-fluviatile_contig1.329.1 ID=prot_P-fluviatile_contig1.329.1|Name=mRNA_P-fluviatile_contig1.329.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=593bp
MGNRHSNSRRKSKVAVAHNQTELEQALQLALPHESKDPQIEKAEQENVEK
QPPSGKKGCHRGKGGGLTAAEDQQQSQEDQQTIISGMKPHGRDGGDGGSG
DGMWDFGDETSDDEPENVGGVVATVNTEKRKCHADGGAGQQGRQQSCGEE
NGGSDGMGAAPRSLAIGVEGGRGRGGDEITTDEQQQARVVVDRLGRRKHA
PKRASSTSSSDDFDGWGDDGDGRDEGKSDEEEENEEEDDETDDEGNADVY
DWTVVNTEDEGALEGGNLGDADSMRNASEGSASERNKTRLKAEVNPLASK
LGLGSGVPRTAMPPAVMAAMESLQRQGRGLGRPPGSVRGAKGAVLGRGGR
PRYFPLMQGQPQHLYPQGRPPAVASGGENIFAGGGAAAPPSEGIVANHQL
VPSAPRSSSGHSLGVGGTPPTGTQLTNGGAPPVAAATVGTIATTPVQSPT
VSPRPYRNSSPPGRGGAGGDVGGGDKGMCGGTAQPPSGASGGKVDCGTSV
AGAGGGARSPGRAGSETAATGDALTPSLKPSGGTSRAASTDPASVGSGGR
SAAAGTRNAVMSTTANATPVMVAATEGAAAAAPKSAAAEEVR*
back to top

mRNA from alignment at P-fluviatile_contig1:3994639..4000151-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig1.329.1 ID=mRNA_P-fluviatile_contig1.329.1|Name=mRNA_P-fluviatile_contig1.329.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5513bp|location=Sequence derived from alignment at P-fluviatile_contig1:3994639..4000151- (Porterinema fluviatile SAG_2381)
CGCAAATTTGTGCGGCTGCTCACGTATGCATTTATTGCTGCTGCACCTAG
TCATGGGCAAATCACGTAAACGCACAAAATGTCACACCAGTGTGGGCCGT
ACTCGACGCTCGACAATCTGCTTGGACAACTCGACGACATCAAGCGACCG
ACAGATTGCCGGCTGGACAATGTAAAGGAGCATGCACACGCACCAGGTCT
GGAAACGAATGATGACACCAACGGCCCCCACGCACAGAGGCTCAGTAAAA
ACCAACGCAGAGCCATGATTCGTGAAGAGAGGATTGGCAAAAGTAGAAGC
CAAGGACGGAGGCGAGAGGGCAGGGGGGGTGATGCAAGCTTGCGAGTGCA
AGTTGCAGGGCAGGGGGGGGAGGCGGAGAGACAAACTATGTGGCAAAAAC
GGCGAAATCCTTCCCCGAACAGCAACATGCGCGCGTTGAACTCTCTGTTG
CCGCCCCCGTTCTATCTTTCAAAAAGGGAGGTAGAAGCTTCCATTGATGA
AATGCACGTACCACTGAAGAGTGAGGGATACACATCCGTCAAGTTCAACC
ACTGGGCTGTAGTCGACGGATTCCGACCAACTCCCCGCTACTTTGCAAGA
AATAGCTCGCCGTGGTTGTAGAGTGGAATGGCATGGGAAACAGGCACTCA
AACTCTCGCAGGAAAAGCAAGGTTGCCGTAGCACACAACCAGACGGAGCT
GGAGCAAGCCCTGCAACTGGCACTGCCGCACGAATCAAAGGATCCGCAGA
TCGAAAAGGCCGAGCAGGAAAATGTAGAGAAGGTACGAGAGAGGGAGGTA
CAGCTGCTTGATTTCTGCCTTAAGAGTGCGAGTTTTCGCTGGGGCAAACA
GGCACCAGGCTTGCCTTGGTAACAAGCGGCGCGCAAGTTGCAAACGAGCG
CAACTCAGCAAATGCTTGGTCCATAAAGCGCACCGACACATGCTTCACCT
GTGTTAGCATGGTGCTCTCTGAAGTTGAACGATTGGTCTACACGCTAAAG
ACTTTCGCTTAGTGGAAGGAAGTCATGTTGCCATGATCAACGTAGCCAAT
ATGTCGCATCTCCGGAAGCGTGAAGGTTGGCAATGACTGCATGCAAACCA
TGGATATCTCGCTCGACTGTGCCTGAAATTACACGGTGCCATTTTGTGCC
AGAGTGCACGATATTGCCGGTGTAGCCATGTTAAGCGCTTGATAACTCGA
CATCGACATGAACGTCGCACAACAGCGTCATTCTTTATGTTGCACTCGGT
GTTTTCGGGGGTAAAACACAGATACACCGAGATCTGATTGATCAAAACAT
TGATACTCAAAGCTCCTGCAAAGCCACGGAAATCTCACCATATATCGACG
TCGTAGATGGTGTCGTGAGGACGGCGATGAACCTATCGCCCGGTGTAGAG
TGTCCGACGCAGCATACGGTCTGCGCTGTCCCGAAAGTGAGAAACAACAG
CGAACGCAAAACAGGGCGAGGTGGCGCGCAATCGGCGGTAGCGGTAGGTG
CAGGGGCGAGGAGTTCAGAGCCGCAGCCAACATATCGGCCAATTGAAGAG
CGCCCAAGCATCGTCGGTCCGATCCACAGTTGTGTGCAGCCGGGCCCACA
TCACCCCAGAATAAATCCAGGCATTTTCAGGCCAAGCTCTCCGACTGTCG
CGGCCGATCCATGGATCGAAGCAATTAACCATTTCAACAGTAGCGCCAGG
CAAGCCTTGCTCACGCCACAGGCAACTGGTACGGAAGGGTATGTATCCTT
CTCTGAGTCCGTCTCGGAAGAATCAGCTTCAACCTTAATGGAAACTTCTG
CTGCTGTACCTGTGCAGCAACCCCCATCGGGAAAAAAGGGTTGTCATCGT
GGTAAAGGCGGAGGCCTCACCGCTGCCGAGGATCAACAGCAATCGCAAGA
AGATCAGCAGACAATCATTAGTGGTATGAAACCACATGGTCGTGACGGTG
GTGATGGTGGAAGCGGAGACGGTATGTGGGACTTCGGTGACGAAACGAGC
GACGACGAACCAGAGAACGTCGGGGGAGTGGTGGCGACTGTCAACACCGA
AAAACGCAAGTGTCATGCAGACGGTGGTGCTGGGCAACAGGGGCGGCAAC
AGTCGTGCGGCGAGGAGAACGGAGGTAGCGATGGAATGGGAGCTGCACCT
AGATCCCTGGCTATAGGTGTCGAGGGTGGTCGAGGGAGGGGGGGGGACGA
GATTACCACTGACGAGCAGCAGCAGGCCCGGGTAGTCGTGGACAGACTAG
GACGGCGGAAACACGCCCCTAAACGGTGAGTGCCTTGATGCAAAGGAAGA
AACGCCGTTGGTTGTACATCATGCGCTAGACACCTACTATGCAGGGAACT
AGCCCCTATCCTGTGTTTGATGATTCGCATGCTCCGTCTAAGTAGAGCCT
ATATCTGGTGACGGCCTAGTCTAAACACCTCGGGGTGGGAATGCTGTCGC
CGCCTCCATAGAGCGTCGTCCACTTCGTCGTCCGACGACTTTGACGGATG
GGGTGACGATGGCGACGGGCGAGACGAAGGAAAAAGCGACGAGGAAGAAG
AAAATGAAGAAGAGGACGACGAAACCGACGATGAAGGCAACGCTGACGTC
TACGATTGGACCGTGGTGAACACGGAGGGTGAGGGAGAGGCACCTGAAAC
CATTGACGCAAACAGAGAGGTGTAGAAGGGGTGTAGGAGAACCGGGATGA
AATTACTCGCTTAATACTTAATGAATGAGGCAGAAAAACGAATAAAGCAA
GAGAGATAGGGCAAAAGTTACGAATATGCAGATAGGCTGCGCGAGTTCTA
GCAAGAGGCAACGAGCTTGGAGAGATTGGTAGACCATGAGGGCACGCTGA
GGGAGTTCGACATCGAGGGTTTCCCACTCTTGCTCAAGCCGTTGTCTGCT
CGCAAAGATCAGGGCAACACAACGCGCCGTTGAATCCCAATTTTTTTGGA
AACGTGGGCGAAGCACCAAGCACCAACTGCGCACTCACCAGAAGCAAAAA
ATACGGGTCTGCTCCACATCTGGGCTCGCAGACGAAGGAGCTTTGGAAGG
CGGCAACCTCGGAGACGCGGACAGCATGAGAAACGCCTCTGAGGGGTCGG
CGAGCGAAAGAAACAAGACGAGATTGAAGGCGGAGGTCAACCCGCTGGCG
AGCAAGCTCGGCCTGGGCTCCGGCGTGCCTCGAACCGCCATGCCTCCGGC
GGTAATGGCGGCGATGGAATCGCTGCAGCGTCAAGGCCGCGGCCTCGGCC
GGCCGCCGGGATCAGTACGCGGCGCGAAGGGGGCCGTCCTCGGGAGGGGG
GGTCGACCGCGGTACTTCCCGCTCATGCAGGCGAGCAAGTGATTCGGTCT
CGCTAAAGCTCTGGCTCTCTGGATTTGATTGTTTTGCGTTTTTGGTCGTT
GGGCGTGCTCACCCGCGGCCGATACAAGTGGAGTGAGTATTACGCAAACC
TTCCACCCCGAGTTCGATTGCACACCAACGATCCCTGTATAGTCAAAGAC
GCACATGGATCCCCGGCTAGGGATTGCCGCCCCTTGTGTGCTTTTCACCG
CTGGTGTCTGCTTAAACACCCCGTGTCTCGTGTCTCGCATCAGTCGTTGA
TTCTTCACGTCGCCTCGCTACGACGACTCTGGCCAGGCCGCAACAAACAT
CGGAAACAATGTCTCCCGCGTTTCCGACCTAGCTTCCGCTTTCTTCAATT
CAAACCAGGGGCAGCCTCAACACCTCTACCCGCAAGGACGCCCTCCCGCT
GTTGCCAGCGGCGGTGAAAACATTTTCGCCGGTGGGGGGGCCGCGGCGCC
ACCTTCAGAAGGAATAGTCGCCAACCACCAACTTGTGCCGTCAGCACCTA
GAAGTTCGAGCGGACACAGCCTGGGGGTCGGCGGCACGCCACCAACGGGA
ACACAACTCACTAACGGCGGAGCCCCGCCCGTCGCCGCCGCGACCGTTGG
CACGATCGCCACCACGCCGGTTCAGTCGCCGACCGTATCTCCCCGCCCCT
ACCGAAACAGCAGTCCACCAGGCCGAGGAGGAGCAGGAGGAGACGTAGGA
GGAGGGGATAAAGGGATGTGTGGGGGTACTGCCCAGCCGCCATCTGGGGC
CTCTGGCGGAAAGGTCGATTGTGGGACTTCGGTGGCCGGTGCCGGAGGTG
GTGCAAGGAGCCCAGGACGAGCAGGATCGGAGACGGCGGCGACGGGAGGT
TCGTAGATGGTTCCTCTGTTTCATGAGCGTCGGCCACAAACAATTGGTCG
GGCTGTCCGATTGTTTTGTATGGTTGACCGGAGGCGGAGGAGTGAGAGGG
TGAATGCACCCTTTGCTGTTTCGCGAGAAGAATCCGTCGTTGCTTGCATT
GAAGTTGGTTTGAACGCTACTTTCACTTGGTTGGACCGATCGTGAGGCGA
ACACGTTTTGTATCCAACGGGCGACTCGACATATTCTGCATACTCATCAA
TAGCCGTCCATAACTCGAGGGCGGACTCCTCTCTTTACGGGGCTGGAGAA
AGAAATGTTACTCGGCGCCCAACATTTTTGACGAAAAAGTAGCATCTTTT
TTCCCGCTCCTTCTCAATCGTGTGGATCGGCCGAATGTATGTGTAGTGCG
CGAGCAGTCCGCTTTCCCCTTTTGATGAAGAAACCTTTGGAGTGTCCATC
GGACACTTTACGCCAAAGACAGCCCATCGCTAGTTTTTTGGTGGTTCAAG
TGCCACCGCTTCAACACCGACTACAAAGGCGTGAAAGTCTGGTACAGTAA
CGACGTCGAGCATCGTTTCCCTCCTCTTCACCGCAGCAGATGCTTTGACC
CCCTCCTTGAAACCATCCGGGGGAACGTCTAGAGCTGCGAGTACTGACCC
TGCTTCTGTTGGAAGTGGCGGTAGAAGCGCGGCGGCTGGAACCCGGAATG
CGGTCATGTCCACTACTGCAAACGCGACGCCGGTGATGGTGGCTGCGACC
GAGGGAGCGGCGGCGGCCGCGCCGAAGTCGGCCGCAGCGGAGGAGGTACG
TTAACAAATGGCGACATCTGCAACAAAATAAAAATCGTTTCCTTTCCTGA
ACCAAGAATGACGGAACCCTGGCAAACGGATGGCGATCTTTTCAGGAGAG
GCATCGAGAAAAACTGTTGATGGGGTTGTTTTGGGGTGGCAATCATGACG
GTGCGCTGGTGAAAAAGAATGAGAAGGACTAGGGCGAGAGGGAGAAGGAG
GAGGCGAATGAGAAAAATGCTCAAAACACTTCCGAACGTTTTTGAAATGG
CGAACAAAGGCGTTGGCAATTTCTCCGCTACTCAAGTCAGGTTCGACCAA
AGTCCTATCCGTGTGGCAGCAGCAAATTCTAGGGCAGACTCTCGCCGTTT
CAGCAAATTCTAGGGCAGACTCTCGCCGTTTCAGCGAATTCTAGGGCAAA
CTCTCGCCGTTTCAGCAAATTCTAGGGCAGACTCTCGCCGTTTCATCCCG
ATTCGACCACAACCAATACTCCGCACGGTGCGGCTGACGCGCAACGCCAT
GTCATGTGCTACG
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig1:3994639..4000151-

>mRNA_P-fluviatile_contig1.329.1 ID=mRNA_P-fluviatile_contig1.329.1|Name=mRNA_P-fluviatile_contig1.329.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3558bp|location=Sequence derived from alignment at P-fluviatile_contig1:3994639..4000151- (Porterinema fluviatile SAG_2381)
ATGGGAAACAGGCACTCAAACTCTCGCAGGAAAAGCAAGGTTGCCGTAGC
ACACAACCAGACGGAGCTGGAGCAAGCCCTGCAACTGGCACTGCCGCACG
AATCAAAGGATCCGCAGATCGAAAAGGCCGAGCAGGAAAATGTAGAGAAG
ATGGGAAACAGGCACTCAAACTCTCGCAGGAAAAGCAAGGTTGCCGTAGC
ACACAACCAGACGGAGCTGGAGCAAGCCCTGCAACTGGCACTGCCGCACG
AATCAAAGGATCCGCAGATCGAAAAGGCCGAGCAGGAAAATGTAGAGAAG
CAACCCCCATCGGGAAAAAAGGGTTGTCATCGTGGTAAAGGCGGAGGCCT
CACCGCTGCCGAGGATCAACAGCAATCGCAAGAAGATCAGCAGACAATCA
TTAGTGGTATGAAACCACATGGTCGTGACGGTGGTGATGGTGGAAGCGGA
GACGGTATGTGGGACTTCGGTGACGAAACGAGCGACGACGAACCAGAGAA
CGTCGGGGGAGTGGTGGCGACTGTCAACACCGAAAAACGCAAGTGTCATG
CAGACGGTGGTGCTGGGCAACAGGGGCGGCAACAGTCGTGCGGCGAGGAG
AACGGAGGTAGCGATGGAATGGGAGCTGCACCTAGATCCCTGGCTATAGG
TGTCGAGGGTGGTCGAGGGAGGGGGGGGGACGAGATTACCACTGACGAGC
AGCAGCAGGCCCGGGTAGTCGTGGACAGACTAGGACGGCGGAAACACGCC
CCTAAACGCAACCCCCATCGGGAAAAAAGGGTTGTCATCGTGGTAAAGGC
GGAGGCCTCACCGCTGCCGAGGATCAACAGCAATCGCAAGAAGATCAGCA
GACAATCATTAGTGGTATGAAACCACATGGTCGTGACGGTGGTGATGGTG
GAAGCGGAGACGGTATGTGGGACTTCGGTGACGAAACGAGCGACGACGAA
CCAGAGAACGTCGGGGGAGTGGTGGCGACTGTCAACACCGAAAAACGCAA
GTGTCATGCAGACGGTGGTGCTGGGCAACAGGGGCGGCAACAGTCGTGCG
GCGAGGAGAACGGAGGTAGCGATGGAATGGGAGCTGCACCTAGATCCCTG
GCTATAGGTGTCGAGGGTGGTCGAGGGAGGGGGGGGGACGAGATTACCAC
TGACGAGCAGCAGCAGGCCCGGGTAGTCGTGGACAGACTAGGACGGCGGA
AACACGCCCCTAAACGAGCGTCGTCCACTTCGTCGTCCGACGACTTTGAC
GGATGGGGTGACGATGGCGACGGGCGAGACGAAGGAAAAAGCGACGAGGA
AGAAGAAAATGAAGAAGAGGACGACGAAACCGACGATGAAGGCAACGCTG
ACGTCTACGATTGGACCGTGGTGAACACGGAGGAGCGTCGTCCACTTCGT
CGTCCGACGACTTTGACGGATGGGGTGACGATGGCGACGGGCGAGACGAA
GGAAAAAGCGACGAGGAAGAAGAAAATGAAGAAGAGGACGACGAAACCGA
CGATGAAGGCAACGCTGACGTCTACGATTGGACCGTGGTGAACACGGAGG
ACGAAGGAGCTTTGGAAGGCGGCAACCTCGGAGACGCGGACAGCATGAGA
AACGCCTCTGAGGGGTCGGCGAGCGAAAGAAACAAGACGAGATTGAAGGC
GGAGGTCAACCCGCTGGCGAGCAAGCTCGGCCTGGGCTCCGGCGTGCCTC
GAACCGCCATGCCTCCGGCGGTAATGGCGGCGATGGAATCGCTGCAGCGT
CAAGGCCGCGGCCTCGGCCGGCCGCCGGGATCAGTACGCGGCGCGAAGGG
GGCCGTCCTCGGGAGGGGGGGTCGACCGCGGTACTTCCCGCTCATGCAGA
CGAAGGAGCTTTGGAAGGCGGCAACCTCGGAGACGCGGACAGCATGAGAA
ACGCCTCTGAGGGGTCGGCGAGCGAAAGAAACAAGACGAGATTGAAGGCG
GAGGTCAACCCGCTGGCGAGCAAGCTCGGCCTGGGCTCCGGCGTGCCTCG
AACCGCCATGCCTCCGGCGGTAATGGCGGCGATGGAATCGCTGCAGCGTC
AAGGCCGCGGCCTCGGCCGGCCGCCGGGATCAGTACGCGGCGCGAAGGGG
GCCGTCCTCGGGAGGGGGGGTCGACCGCGGTACTTCCCGCTCATGCAGGG
GCAGCCTCAACACCTCTACCCGCAAGGACGCCCTCCCGCTGTTGCCAGCG
GCGGTGAAAACATTTTCGCCGGTGGGGGGGCCGCGGCGCCACCTTCAGAA
GGAATAGTCGCCAACCACCAACTTGTGCCGTCAGCACCTAGAAGTTCGAG
CGGACACAGCCTGGGGGTCGGCGGCACGCCACCAACGGGAACACAACTCA
CTAACGGCGGAGCCCCGCCCGTCGCCGCCGCGACCGTTGGCACGATCGCC
ACCACGCCGGTTCAGTCGCCGACCGTATCTCCCCGCCCCTACCGAAACAG
CAGTCCACCAGGCCGAGGAGGAGCAGGAGGAGACGTAGGAGGAGGGGATA
AAGGGATGTGTGGGGGTACTGCCCAGCCGCCATCTGGGGCCTCTGGCGGA
AAGGTCGATTGTGGGACTTCGGTGGCCGGTGCCGGAGGTGGTGCAAGGAG
CCCAGGACGAGCAGGATCGGAGACGGCGGCGACGGGAGGGGCAGCCTCAA
CACCTCTACCCGCAAGGACGCCCTCCCGCTGTTGCCAGCGGCGGTGAAAA
CATTTTCGCCGGTGGGGGGGCCGCGGCGCCACCTTCAGAAGGAATAGTCG
CCAACCACCAACTTGTGCCGTCAGCACCTAGAAGTTCGAGCGGACACAGC
CTGGGGGTCGGCGGCACGCCACCAACGGGAACACAACTCACTAACGGCGG
AGCCCCGCCCGTCGCCGCCGCGACCGTTGGCACGATCGCCACCACGCCGG
TTCAGTCGCCGACCGTATCTCCCCGCCCCTACCGAAACAGCAGTCCACCA
GGCCGAGGAGGAGCAGGAGGAGACGTAGGAGGAGGGGATAAAGGGATGTG
TGGGGGTACTGCCCAGCCGCCATCTGGGGCCTCTGGCGGAAAGGTCGATT
GTGGGACTTCGGTGGCCGGTGCCGGAGGTGGTGCAAGGAGCCCAGGACGA
GCAGGATCGGAGACGGCGGCGACGGGAGATGCTTTGACCCCCTCCTTGAA
ACCATCCGGGGGAACGTCTAGAGCTGCGAGTACTGACCCTGCTTCTGTTG
GAAGTGGCGGTAGAAGCGCGGCGGCTGGAACCCGGAATGCGGTCATGTCC
ACTACTGCAAACGCGACGCCGGTGATGGTGGCTGCGACCGAGGGAGCGGC
GGCGGCCGCGCCGAAGTCGGCCGCAGCGGAGGAGGTACGTTAAATGCTTT
GACCCCCTCCTTGAAACCATCCGGGGGAACGTCTAGAGCTGCGAGTACTG
ACCCTGCTTCTGTTGGAAGTGGCGGTAGAAGCGCGGCGGCTGGAACCCGG
AATGCGGTCATGTCCACTACTGCAAACGCGACGCCGGTGATGGTGGCTGC
GACCGAGGGAGCGGCGGCGGCCGCGCCGAAGTCGGCCGCAGCGGAGGAGG
TACGTTAA
back to top