mRNA_P-fluviatile_contig1.323.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig1.323.1
Unique NamemRNA_P-fluviatile_contig1.323.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.323.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:3921800..3923847 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Hectar predicted targeting categorysignal peptide
Exons1
Model size2048
Cds size1203
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.323.1prot_P-fluviatile_contig1.323.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig1 3921975..3923177 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815269.7854872-UTR-P-fluviatile_contig1:3921799..39219741622815269.7854872-UTR-P-fluviatile_contig1:3921799..3921974Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 3921800..3921974 +
1693561321.5672433-UTR-P-fluviatile_contig1:3921799..39219741693561321.5672433-UTR-P-fluviatile_contig1:3921799..3921974Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 3921800..3921974 +
1622815269.8163745-UTR-P-fluviatile_contig1:3923177..39238471622815269.8163745-UTR-P-fluviatile_contig1:3923177..3923847Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 3923178..3923847 +
1693561321.6502106-UTR-P-fluviatile_contig1:3923177..39238471693561321.6502106-UTR-P-fluviatile_contig1:3923177..3923847Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 3923178..3923847 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815269.800798-CDS-P-fluviatile_contig1:3921974..39231771622815269.800798-CDS-P-fluviatile_contig1:3921974..3923177Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3921975..3923177 +
1693561321.5837042-CDS-P-fluviatile_contig1:3921974..39231771693561321.5837042-CDS-P-fluviatile_contig1:3921974..3923177Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3921975..3923177 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig1.323.1

>prot_P-fluviatile_contig1.323.1 ID=prot_P-fluviatile_contig1.323.1|Name=mRNA_P-fluviatile_contig1.323.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=401bp
MRHGKHIGGIGAIRTVVVISLAIDSVIQLTSAEFYTASPTAVAAAASTPG
FVGNSDTSGSSSATAAQAPQIGTVVSAEDVTTATSDSSAAGGSTTTPAPT
LKARPPTLKTPPSTLKTPAPSVTTTPLPFPPLPPEPLPTPPPASSATTAP
LSFQPLATMPLPTPLPPVSSPTTTPLPPLAPLALPLPSPPPPPPVPLLDG
GSPGRNRDPTSSPLNAAYSTPNNKNGDSTFSPATHAPQEEIMAVSDDGKT
FTSDSSATSGVAPRHPTTAPAPSRALPSPSPATLAPTPWIVSSSGVGGGR
TRPVTPSNSDRDVASDSTSVVAFRYPLTTPAPLPLVASGTGFGSARSLDP
TRPPSGIANENEAVEANGATAGGLLRSKLRVVLLVVPASSLLAATSLLAR
*
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mRNA from alignment at P-fluviatile_contig1:3921800..3923847+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig1.323.1 ID=mRNA_P-fluviatile_contig1.323.1|Name=mRNA_P-fluviatile_contig1.323.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2048bp|location=Sequence derived from alignment at P-fluviatile_contig1:3921800..3923847+ (Porterinema fluviatile SAG_2381)
AAACGACAAAATTAGTAGAGCAGAAATTGCAGCACAGCTCAAAACCTAGT
CCCCCGCCCGCCCCTATGATTGGTATGTCCGCTTTCGCCGCCTTCCCCTC
GGCTTGTGTGTATCCCTTCGCTGCCGGCAGTCGGTACGACAGCGACGCCC
GAAGGGAGAGGAGTTCCACCGATCGATGCGTCATGGCAAACATATCGGCG
GGATCGGCGCGATCAGGACGGTCGTGGTCATTTCTCTTGCCATCGACAGC
GTGATCCAGCTTACAAGCGCCGAGTTCTACACTGCCTCCCCTACGGCGGT
TGCCGCCGCCGCCTCAACCCCTGGCTTTGTAGGCAACAGCGACACGAGCG
GTTCGAGTTCCGCCACCGCTGCGCAAGCGCCGCAAATTGGAACCGTGGTC
TCCGCTGAAGACGTCACCACCGCAACATCTGATTCCTCTGCCGCTGGAGG
TTCAACGACGACGCCGGCCCCTACGCTGAAGGCGCGGCCCCCAACGCTTA
AGACTCCGCCCTCGACGCTCAAGACGCCGGCCCCATCGGTGACGACAACA
CCGTTGCCATTTCCACCGCTGCCGCCAGAACCGTTGCCGACGCCGCCGCC
GGCCTCATCTGCGACGACAGCGCCATTGTCATTCCAGCCGCTGGCGACAA
TGCCCTTGCCAACACCGCTGCCGCCGGTCTCGTCGCCGACGACAACGCCA
TTGCCGCCGCTGGCGCCGCTGGCCCTTCCTCTGCCATCGCCTCCGCCGCC
GCCGCCGGTCCCATTGCTCGATGGCGGCTCTCCTGGGAGGAACAGAGACC
CGACTTCGTCGCCCTTAAATGCGGCCTATTCCACCCCCAACAACAAGAAC
GGCGACTCGACCTTTTCTCCCGCTACGCATGCGCCGCAAGAGGAAATTAT
GGCTGTCTCTGATGATGGGAAGACGTTTACTTCTGACTCCTCCGCTACTT
CTGGTGTAGCGCCAAGACATCCCACGACGGCGCCGGCCCCATCGAGAGCG
CTGCCGTCCCCATCGCCGGCGACGCTGGCCCCGACACCGTGGATTGTCAG
CAGCAGTGGGGTTGGTGGTGGCAGGACTAGACCCGTGACACCATCCAATA
GCGATCGTGATGTAGCATCTGACTCTACCTCTGTTGTAGCATTCAGGTAC
CCTTTGACAACGCCGGCGCCGTTGCCTTTAGTCGCTAGTGGGACCGGGTT
CGGTAGTGCACGGAGCTTGGATCCGACACGGCCGCCGTCTGGTATTGCCA
ACGAAAATGAGGCCGTAGAGGCCAACGGGGCCACGGCCGGGGGTTTGCTG
CGTTCAAAGTTAAGGGTGGTGCTGCTGGTAGTACCGGCTAGCTCATTGTT
GGCGGCGACGAGCCTTCTGGCAAGGTGAGAACACTCTAGCAACGGTACCA
TTTGTAACGCAGAATACTTCGCCTTGTTGCAGGTGGCAGATTCCTTGAGA
CTGCCTTGCTTACTTTCATCGGCTTCCGTGTAGTGTCGCACTTGATTGGC
ATTTGGTTTGTGATATTTTGTTTTTTGCGGTGAGCCATCCGCCCGCACGG
GCAGTTGGGTGGCTAGCACAGATTGCAGTGACGGAAGGGGGCCTGGATGG
TGGAGTACGCTCTTGAGATGTAGGCGCGCTCGGCGGAAGCGGAGAGACCA
GGCGCCTGACGTCACGTTGAGGCAAAACGCTACAAGGGGAAAATGGTTAG
TTTGGAGTCTATTCGCGGCGACAAGCTTCCGATGCGGCCCGGAGTAGGAG
ATGGCGGCTGCCGAATCATCTGCTCATCGTTGGCACGGGCTTTGTTGGAG
GGCGTTTGTGTGTTTGTATATTTGGTGGACCTTGAGCGCTTCAAGATTTT
GAGTTTTGGCTAATCAAGTCGGAGAGGGCGGCGACATGTCAGTTCACCCC
TTACACTGGAGAAAGCATTTTCCAGTGTATGTTTGGTTGTAAGAGGAGCC
TGTTGTATGCGTGTGCGGGCTTTGTTATGTGTGTTTTTGAACATTCATCG
ATTCCCCTGTATTTTCAATCCAAAGATGAACAACAATTGAAATACCAC
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Coding sequence (CDS) from alignment at P-fluviatile_contig1:3921800..3923847+

>mRNA_P-fluviatile_contig1.323.1 ID=mRNA_P-fluviatile_contig1.323.1|Name=mRNA_P-fluviatile_contig1.323.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2406bp|location=Sequence derived from alignment at P-fluviatile_contig1:3921800..3923847+ (Porterinema fluviatile SAG_2381)
ATGCGTCATGGCAAACATATCGGCGGGATCGGCGCGATCAGGACGGTCGT
GGTCATTTCTCTTGCCATCGACAGCGTGATCCAGCTTACAAGCGCCGAGT
TCTACACTGCCTCCCCTACGGCGGTTGCCGCCGCCGCCTCAACCCCTGGC
TTTGTAGGCAACAGCGACACGAGCGGTTCGAGTTCCGCCACCGCTGCGCA
AGCGCCGCAAATTGGAACCGTGGTCTCCGCTGAAGACGTCACCACCGCAA
CATCTGATTCCTCTGCCGCTGGAGGTTCAACGACGACGCCGGCCCCTACG
CTGAAGGCGCGGCCCCCAACGCTTAAGACTCCGCCCTCGACGCTCAAGAC
GCCGGCCCCATCGGTGACGACAACACCGTTGCCATTTCCACCGCTGCCGC
CAGAACCGTTGCCGACGCCGCCGCCGGCCTCATCTGCGACGACAGCGCCA
TTGTCATTCCAGCCGCTGGCGACAATGCCCTTGCCAACACCGCTGCCGCC
GGTCTCGTCGCCGACGACAACGCCATTGCCGCCGCTGGCGCCGCTGGCCC
TTCCTCTGCCATCGCCTCCGCCGCCGCCGCCGGTCCCATTGCTCGATGGC
GGCTCTCCTGGGAGGAACAGAGACCCGACTTCGTCGCCCTTAAATGCGGC
CTATTCCACCCCCAACAACAAGAACGGCGACTCGACCTTTTCTCCCGCTA
CGCATGCGCCGCAAGAGGAAATTATGGCTGTCTCTGATGATGGGAAGACG
TTTACTTCTGACTCCTCCGCTACTTCTGGTGTAGCGCCAAGACATCCCAC
GACGGCGCCGGCCCCATCGAGAGCGCTGCCGTCCCCATCGCCGGCGACGC
TGGCCCCGACACCGTGGATTGTCAGCAGCAGTGGGGTTGGTGGTGGCAGG
ACTAGACCCGTGACACCATCCAATAGCGATCGTGATGTAGCATCTGACTC
TACCTCTGTTGTAGCATTCAGGTACCCTTTGACAACGCCGGCGCCGTTGC
CTTTAGTCGCTAGTGGGACCGGGTTCGGTAGTGCACGGAGCTTGGATCCG
ACACGGCCGCCGTCTGGTATTGCCAACGAAAATGAGGCCGTAGAGGCCAA
CGGGGCCACGGCCGGGGGTTTGCTGCGTTCAAAGTTAAGGGTGGTGCTGC
TGGTAGTACCGGCTAGCTCATTGTTGGCGGCGACGAGCCTTCTGGCAAGG
TGAATGCGTCATGGCAAACATATCGGCGGGATCGGCGCGATCAGGACGGT
CGTGGTCATTTCTCTTGCCATCGACAGCGTGATCCAGCTTACAAGCGCCG
AGTTCTACACTGCCTCCCCTACGGCGGTTGCCGCCGCCGCCTCAACCCCT
GGCTTTGTAGGCAACAGCGACACGAGCGGTTCGAGTTCCGCCACCGCTGC
GCAAGCGCCGCAAATTGGAACCGTGGTCTCCGCTGAAGACGTCACCACCG
CAACATCTGATTCCTCTGCCGCTGGAGGTTCAACGACGACGCCGGCCCCT
ACGCTGAAGGCGCGGCCCCCAACGCTTAAGACTCCGCCCTCGACGCTCAA
GACGCCGGCCCCATCGGTGACGACAACACCGTTGCCATTTCCACCGCTGC
CGCCAGAACCGTTGCCGACGCCGCCGCCGGCCTCATCTGCGACGACAGCG
CCATTGTCATTCCAGCCGCTGGCGACAATGCCCTTGCCAACACCGCTGCC
GCCGGTCTCGTCGCCGACGACAACGCCATTGCCGCCGCTGGCGCCGCTGG
CCCTTCCTCTGCCATCGCCTCCGCCGCCGCCGCCGGTCCCATTGCTCGAT
GGCGGCTCTCCTGGGAGGAACAGAGACCCGACTTCGTCGCCCTTAAATGC
GGCCTATTCCACCCCCAACAACAAGAACGGCGACTCGACCTTTTCTCCCG
CTACGCATGCGCCGCAAGAGGAAATTATGGCTGTCTCTGATGATGGGAAG
ACGTTTACTTCTGACTCCTCCGCTACTTCTGGTGTAGCGCCAAGACATCC
CACGACGGCGCCGGCCCCATCGAGAGCGCTGCCGTCCCCATCGCCGGCGA
CGCTGGCCCCGACACCGTGGATTGTCAGCAGCAGTGGGGTTGGTGGTGGC
AGGACTAGACCCGTGACACCATCCAATAGCGATCGTGATGTAGCATCTGA
CTCTACCTCTGTTGTAGCATTCAGGTACCCTTTGACAACGCCGGCGCCGT
TGCCTTTAGTCGCTAGTGGGACCGGGTTCGGTAGTGCACGGAGCTTGGAT
CCGACACGGCCGCCGTCTGGTATTGCCAACGAAAATGAGGCCGTAGAGGC
CAACGGGGCCACGGCCGGGGGTTTGCTGCGTTCAAAGTTAAGGGTGGTGC
TGCTGGTAGTACCGGCTAGCTCATTGTTGGCGGCGACGAGCCTTCTGGCA
AGGTGA
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