mRNA_P-fluviatile_contig1.322.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig1.322.1 vs. uniprot
Match: D8LLP2_ECTSI (Protein cereblon n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLP2_ECTSI) HSP 1 Score: 416 bits (1068), Expect = 8.580e-132 Identity = 274/456 (60.09%), Postives = 295/456 (64.69%), Query Frame = 3
Query: 312 ATHAYLGEATTGSS-LSRTDLEVGSTIDMPILSLPGVVLFPGESLPLRLHNPAYALLVMSLLEGGGGAAVAGSVRRGRGGSGASGERQAARHLGVVNRLTSRSGGLLVRTSPVGTTAEIRAGYVGSAGDDTDDGGA----GGLAVMARGRHRFRLKEDLGWRRGVRYWRVVICPDLCPGPLSPPIPRAFRDFSG-HARGDRGGGGRGNKSHWTMAVPRFVVKNNSPTGLAARAAFLLREQKEPLPRGSRPLVPPPPGRGAEPRASRAGGEGAAEVFSTEATEGRSNSQALAQAQRPXXXXXLLPQDRDSLRHPAGVRDRWQPEPGSDAGRTHNNEEDDWNEEGXXXXXXXXXXXXXXXXXGDGVPRRAGKLDPTLFSFWLAANLPLDDDARQQLLMLDSVVMRLRLEVKHLEKSRRRSLCCAGCGIDVAWEADVFTLPGAEGVVGAYVNPQGHVHQ 1661
ATHAYLGEATTGSS LSR DLE GST+++PIL+LPGVVLFPGESLPLRLHNPAYA LV S L GG G +QAARHLGVVNRL SR GG V SPVGTTAE+R+G+ GSA +D D GG GGLA+MARGRHRFRL EDLGWRRGV YW+VVICPD CPG PP+PRAFR+F G RG R GN HW MAVPRF V NSP LAARAA LLREQ+EPLP G+ P E +R GGEG G D S G XXXXXXXXXXXXXXXXX G+PRR GKLDPTLFSFWLAANLPLDDDARQ+LLMLDSVVMRLRLE+KHLE+SRRR LCCA C VAWE DVFTLPGAEGVVGAYVNP G+VHQ
Sbjct: 54 ATHAYLGEATTGSSSLSRKDLEEGSTVEIPILALPGVVLFPGESLPLRLHNPAYADLVESFLGGGXXXXXXXXXXXXXG-------QQAARHLGVVNRLDSRRGGPHVGASPVGTTAEVRSGHGGSA-EDADGGGEXXXXGGLAMMARGRHRFRLVEDLGWRRGVLYWKVVICPDHCPGTFRPPVPRAFREFPGTDRRGRRRRRDGGN--HWPMAVPRFAVVANSPAVLAARAASLLREQREPLPHGAPSGAPQ-----VEEEGARNGGEG---------VSGNVGGXXXXXV------------DVSSAARDEGXXXXXX----------------------XXXXXXXXXXXXXXXXXXXGMPRRRGKLDPTLFSFWLAANLPLDDDARQELLMLDSVVMRLRLEIKHLEQSRRRELCCASCDRGVAWEGDVFTLPGAEGVVGAYVNPTGYVHQ 451
BLAST of mRNA_P-fluviatile_contig1.322.1 vs. uniprot
Match: A0A6H5KP54_9PHAE (CULT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP54_9PHAE) HSP 1 Score: 409 bits (1050), Expect = 9.030e-129 Identity = 270/460 (58.70%), Postives = 292/460 (63.48%), Query Frame = 3
Query: 294 APFPTPATHAYLGEATTGSS-LSRTDLEVGSTIDMPILSLPGVVLFPGESLPLRLHNPAYALLVMSLLEGGGGAAVAGSVRRGRGGSGASGERQAARHLGVVNRLTSRSGGLLVRTSPVGTTAEIRAGYVGSAGDDT---DDGGAGGLAVMARGRHRFRLKEDLGWRRGVRYWRVVICPDLCPGPLSPPIPRAFRDFSGHARGDRGGGGRGNKSHWTMAVPRFVVKNNSPTGLAARAAFLLREQKEPLPRGSRPLVPPPPGRGAEPRASRAGGEGAAEVFSTEATEGRSNSQALAQAQRPXXXXXLLPQDRDSLRHPAGVRDRWQPEPGSDAGRTHNNEEDDWNEEGXXXXXXXXXXXXXXXXXGDGVPRRAGKLDPTLFSFWLAANLPLDDDARQQLLMLDSVVMRLRLEVKHLEKSRRRSLCCAGCGIDVAWEADVFTLPGAEGVVGAYVNPQGHVHQ 1661
AP PTPATHAYLGEATTGSS LSR DLE GST+++PIL+LPGVVLFPGESLPLRLHNPAYA LV S L GG GA G +QAARHLGVVNRL SR AE+R+G SA D + G GGLA+MARGRHRFRL EDLGWRRGVRYW+VVIC D CPG PP+PRAFR+F G R RG R +HWTMAVPRF V NSP LAARAA LLREQ+EPLP G+ P E +R GGEG R N VR S A R XXXXXXXXXXXXXXXXX G+PRR GKLDPTLFSFWLAANLPLDD ARQ+LLMLDSVVMRLR+E+KHLE+SRRR LCCA C VAWE DVFTLPGAEGVVGAYVNP G+VHQ
Sbjct: 107 APLPTPATHAYLGEATTGSSSLSRKDLEEGSTVEIPILALPGVVLFPGESLPLRLHNPAYADLVGSFLGGGAGAXXXXXXXXXXG-------QQAARHLGVVNRLDSRXXXXXXXXXXXXXXAEVRSGXXXSAEDAAGGGEGGDGGGLAMMARGRHRFRLVEDLGWRRGVRYWKVVICSDHCPGTFQPPVPRAFREFPGTGR--RGRRRRDGGNHWTMAVPRFAVVANSPAVLAARAASLLREQREPLPHGATSGAPQ-----VEEGGARNGGEGV-----------RGN-----------------------------VRGGXXXXXVSSAARVEGXX--------XXXXXXXXXXXXXXXXXXXGMPRRRGKLDPTLFSFWLAANLPLDDVARQELLMLDSVVMRLRVEIKHLEESRRRELCCASCNRGVAWEGDVFTLPGAEGVVGAYVNPTGYVHQ 504
BLAST of mRNA_P-fluviatile_contig1.322.1 vs. uniprot
Match: A0A835YMI6_9STRA (Protein cereblon n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMI6_9STRA) HSP 1 Score: 117 bits (292), Expect = 2.060e-23 Identity = 140/452 (30.97%), Postives = 188/452 (41.59%), Query Frame = 3
Query: 318 HAYLGEATTGSSLSRTDLEV--GSTIDMPILSLPGVVLFPGESLPLRLHNPAYALLVMSLLEGGGGAAVAGSVRRGRGGSGASGERQAARHLGVVNRLTSRSGGLLVRTS-PVGTTAEIRAGYVGSAGDDTDDGGAGGLAVMARGRHRFRLKEDLGWRRGVRYWRVVICPDLCPGPLSPPIPRAFRDFSGHARGDRGGGGRGNKSHWTMAVPRFVVKNNSPTGLAARAAFLLREQKEPLPRGSRPLVPPPPGRGAEPRASRAGGEGAAEVFSTEATEGRSNSQALAQAQRPXXXXXLLPQDRDS-LRHPAGVRDRWQPEPGSDAGRTHNNEEDDWNEEGXXXXXXXXXXXXXXXXXGDGVPRRAGKLDPTLFSFWLAANLPLDDDARQQLLMLDSVVMRLRLEVKHLEKSRRRSLCCAGCGIDVAWEADVFTLPGAEGVVGAYVNPQGHVHQ 1661
HAYLG +S S ++ G + +PI+ LPGVVLFPGE+LPLRLH L V++L E R GS S +R A V G V + VGT A + +G AGD+ + V+ARG RFR+ LG+R+G + V + PDL P P + + F + N W + P F + P L A+A LL+E + + XXXXX ++ G++DR + AGR XXXX G G+ FSFWLA++LPL DDARQ LL +SVV RLR V+HL+++ + L CA C +A + F++PGAEG VGAYVNP G VHQ
Sbjct: 2 HAYLGTVQPAASASPEQHQLLDGEELMLPIVVLPGVVLFPGETLPLRLHRDI-DLAVITLAERSLSQQPQPDHELPRNGS--SSDRSAGLFGVVCGPHNPGPEGFQVHAAFSVGTVAAVASGA--RAGDEQ-------VVVLARGMRRFRITRLLGFRQGAPWCSVTVLPDLEPHPAHTVLRQPFAASAF------------NPVAWPSSAPPFAWLASCPALLVAQATRLLQETAAWVALSADDAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAEARAAELLGLQDRLRGVSDQGAGRV-----------------GGGXXXXAARGEGGGLMGGYAGSSAQEFSFWLASSLPLGDDARQALLETNSVVERLRAGVRHLQRAAKLPLRCAHCNTPIAQPSHAFSVPGAEGAVGAYVNPAGFVHQ 412
BLAST of mRNA_P-fluviatile_contig1.322.1 vs. uniprot
Match: W7TMH2_9STRA (Protein cereblon n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TMH2_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 5.210e-16 Identity = 125/469 (26.65%), Postives = 183/469 (39.02%), Query Frame = 3
Query: 351 SLSRTDLEVGST-IDMPILSLPGVVLFPGESLPLRLHNPAYALLVMSLLEGGGGAAVAGSVRRGRGGSGASGERQAARHLGVVNRLTSRSGGLLVRTSPVGTTAEIRAGYVGSAGDDTDDGGAGGLAVMARGRHRFRLKE-----DLGWRRGVRYWRVVICPDLCPGPLSPPIPRAFRDFSGHARGDRGGGGRGNKSHWTMAVPRFVVKNNSPTGLAARAAFLLREQKEPLPRGSRPLVPPPPGRGAEPRASRAGGEGAAEVFSTEATEGRSNSQALAQAQRPXXXXXLLPQDRDSLRHPAGVRDRWQPEPGSDAGRTHNNEEDDWNEEGXXXXXXXXXXXXXXXXXGDGVPRRAGKLDPTLFSFWLAANLPLDDDARQQLLMLDSVVMRLRLEVKHLEKSRRRSLCCAGCGIDVAWEADVFTLPGAEGVVGAYVNPQGHVHQEWGVPLSVLRWAVTEHRKNVVLPLPI 1739
SL+R+ L +T +++PIL LP VVLFPGE+LPLR+ + L++ L A S RRG+ +LG++N RS L+ + VG T E+ ++D G+ L A+GR RFR+ + ++ R+G+ + RV+I D C P +P+ R K H P ++ SP L + +L S E+ +G + + L G + GR +EE +G P D SF LAA+LPLDD RQ+LL +DSVV RL+ + L+ + LCCA C + + + +F++PGAEG VGAY NP G VHQ V V + +NV L PI
Sbjct: 50 SLARSQLLPSNTEVELPILVLPHVVLFPGENLPLRVWELHHVRLLLLL---------AFSQRRGQ-----------PAYLGILN-ARRRS---LMEDAVVGCTCEMFE-------VESDWDGSSPLTAKAKGRQRFRVLDAARGGNMEMRQGIPHVRVLILSDECVSAY-PRLPQWQRS----------------KLHQCTYWPTTIMGLLSPACLLGKVKQILH--------------------------------------SIESWQGVRCATGFELCRIAGFSSDCLD--------------------GEERGREGADEE-------------------------EGAP--VEMRDAVSLSFRLAASLPLDDITRQRLLAMDSVVYRLQNIILLLKNTAESKLCCAHCEVALVGKGALFSVPGAEGTVGAYSNPAGVVHQMLTVR------EVLDEEENVALEGPI 379
BLAST of mRNA_P-fluviatile_contig1.322.1 vs. uniprot
Match: A0A4D9D0A6_9STRA (CULT domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D0A6_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 7.470e-14 Identity = 43/85 (50.59%), Postives = 56/85 (65.88%), Query Frame = 3
Query: 1407 DPTLFSFWLAANLPLDDDARQQLLMLDSVVMRLRLEVKHLEKSRRRSLCCAGCGIDVAWEADVFTLPGAEGVVGAYVNPQGHVHQ 1661
D SF LAA+LPLDD RQ+LL +DSVV RL+ + L+ + LCCA C + + + +F++PGAEG VGAY NP G VHQ
Sbjct: 86 DAVSLSFRLAASLPLDDITRQRLLAMDSVVYRLQNIILLLKNTAESKLCCAHCEVALVGKGALFSVPGAEGTVGAYSNPAGVVHQ 170
BLAST of mRNA_P-fluviatile_contig1.322.1 vs. uniprot
Match: T1JX95_TETUR (Protein cereblon n=1 Tax=Tetranychus urticae TaxID=32264 RepID=T1JX95_TETUR) HSP 1 Score: 85.1 bits (209), Expect = 1.460e-13 Identity = 115/458 (25.11%), Postives = 174/458 (37.99%), Query Frame = 3
Query: 309 PATHAYLGEATTGSSLSRTDLEVGSTIDMPILSLPGVVLFPGESLPLRLHNPAYALLVMSLLEGGGGAAVAGSVRRGRGGSGASGERQAARHLGVVNRLTSRSGGLLVRTSPVGTTAEIRAGYVGSAGDDTDDGGAGGLAVMARGRHRFRLKEDLGWRR--GVRYWRVVICPDLCPGPLSPPIPRAFRDFSGHARGDRGGGGRGNKSHWTMAV-----PRFVVKNNSPTGLAARAAFLLREQKEPLPRGSRPLVPPPPGRGAEPRASRAGGEGAAEVFSTEATEGRSNSQALAQAQRPXXXXXLLPQDRDSLRHPAGVRDRWQPEPGSDAGRTHNNEEDDWNEEGXXXXXXXXXXXXXXXXXGDGVPRRAGKLDPTLFSFWLAANLPLDDDARQQLLMLDSVVMRLRLEVKHLEKSRRRSLCCAGCGIDVAWEADVFTLPGAEGVVGAYVNPQGHVHQ 1661
PA H YLG S R L+ + + +P+L+LPGV+L PG+ LPLRL +PA ++++ +E R+ G+L S VGTT EIR+ Y DD ++ L + A GR RF+L E WR+ G +V I +C ++ P + DF+ RGNK ++ + P FV + + F++ + + L + P P + P + V TE TEG + + +D D + D +T P +S+W+AANLPL DD R +LL + + + RLR E L+K LCC CG + D+F++ EG + YVN GHVH+
Sbjct: 55 PAQHTYLGSNLRELS-GRVVLDDEALVTLPLLTLPGVILIPGQILPLRLEHPAMIAMMLNAIE------------------------------------KERTFGILATDSDVGTTVEIRS-YSRGIEDDAEESV---LKLKAEGRQRFKLIER--WRQDDGFVMGKVKI---MCDIEIAHPFDKNL-DFTS----------RGNKYNYKLVPASTVWPSFVFRMYD-------SHFIMHKINDQLRNWANISKPSP----SNPAVDHKIKDVQQTVHETEDTEGSIQIRKTV--------VTTIRRDDDXXMESXXXXXXXXXD-AQDFSQT--------------------------------------LASPYKYSYWVAANLPLSDDQRVELLKIPTTIGRLRFEYDLLQKCL--FLCCIQCGSKICTREDIFSMS-VEGPLQNYVNLSGHVHE 394
BLAST of mRNA_P-fluviatile_contig1.322.1 vs. uniprot
Match: A0A7S1EK15_HEMAN (Protein yippee-like (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1EK15_HEMAN) HSP 1 Score: 74.7 bits (182), Expect = 2.620e-12 Identity = 31/52 (59.62%), Postives = 36/52 (69.23%), Query Frame = 1
Query: 1804 KTVTVSDARNLALVGAPEEEHTWFPGYAWTIACCGRCPHHLGWRFTAIGRQA 1959
+T T A+NL LVG EH+WFPGYAWTIA C RC H+GWRF A+ R A
Sbjct: 47 ETATFYRAKNLVLVGPSSTEHSWFPGYAWTIALCARCASHIGWRFDAVKRDA 98
BLAST of mRNA_P-fluviatile_contig1.322.1 vs. uniprot
Match: K1QI70_CRAGI (Protein cereblon n=2 Tax=Crassostrea gigas TaxID=29159 RepID=K1QI70_CRAGI) HSP 1 Score: 80.9 bits (198), Expect = 3.230e-12 Identity = 46/104 (44.23%), Postives = 63/104 (60.58%), Query Frame = 3
Query: 1410 PTLFSFWLAANLPLDDDARQQLLMLDSVVMRLRLEVKHLEKSRRRSLCCAGCGIDVAWEADVFTLPGAEGVVGAYVNPQGHVHQEWGV----PLSVLRWAVTEH 1709
P S+W+ NLPLDDD R L+ +DS V RLR + ++K SLCC C ++A + DVF+L EG +GAYVNPQG+VH+ V L+++ A EH
Sbjct: 297 PVELSYWVIQNLPLDDDLRLNLMGIDSAVQRLRCSLSIVQKCS--SLCCKECNTNIANKNDVFSLS-VEGPLGAYVNPQGYVHETMTVYKAQNLNLIGRATKEH 397
BLAST of mRNA_P-fluviatile_contig1.322.1 vs. uniprot
Match: A0A3S1B4A4_ELYCH (Protein cereblon n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A3S1B4A4_ELYCH) HSP 1 Score: 80.5 bits (197), Expect = 5.380e-12 Identity = 48/105 (45.71%), Postives = 64/105 (60.95%), Query Frame = 3
Query: 1407 DPTLFSFWLAANLPLDDDARQQLLMLDSVVMRLRLEVKHLEKSRRRSLCCAGCGIDVAWEADVFTLPGAEGVVGAYVNPQGHVHQEWGVP----LSVLRWAVTEH 1709
DP SFW+A NLP++DD R +LL DSVV RLR + + KS R LCC C ++ + VF++ EG +GAYVNP GHVH+ + V L+ + A TEH
Sbjct: 349 DPVDLSFWVAHNLPVNDDVRLKLLSFDSVVQRLRFGLNVIRKSGRL-LCCDQCQEQISSKEHVFSMC-QEGPLGAYVNPHGHVHEMFTVTTIQNLTHVGGAYTEH 451
BLAST of mRNA_P-fluviatile_contig1.322.1 vs. uniprot
Match: T1JIH3_STRMM (Protein cereblon n=1 Tax=Strigamia maritima TaxID=126957 RepID=T1JIH3_STRMM) HSP 1 Score: 79.7 bits (195), Expect = 6.840e-12 Identity = 43/95 (45.26%), Postives = 59/95 (62.11%), Query Frame = 3
Query: 1377 DGVPRRAGKLDPTLFSFWLAANLPLDDDARQQLLMLDSVVMRLRLEVKHLEKSRRRSLCCAGCGIDVAWEADVFTLPGAEGVVGAYVNPQGHVHQ 1661
D +PR A + FSFW+AANLPLDD R +L +DS + RLR E+ LEK +LCC C +++ + DVF++ EG YVNP G+VH+
Sbjct: 271 DSMPRLASE-----FSFWVAANLPLDDTLRLNILAIDSPIQRLRCELSILEKCT--ALCCRDCDVEITDKTDVFSMS-IEGPQSIYVNPGGYVHE 357 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.322.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig1.322.1 >prot_P-fluviatile_contig1.322.1 ID=prot_P-fluviatile_contig1.322.1|Name=mRNA_P-fluviatile_contig1.322.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=670bp MTDIREGRAAGQPPAHATAHDEHDGSPSAASLARDTYDGSNVAAAAAAAEback to top mRNA from alignment at P-fluviatile_contig1:3913230..3918672+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig1.322.1 ID=mRNA_P-fluviatile_contig1.322.1|Name=mRNA_P-fluviatile_contig1.322.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5443bp|location=Sequence derived from alignment at P-fluviatile_contig1:3913230..3918672+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig1:3913230..3918672+ >mRNA_P-fluviatile_contig1.322.1 ID=mRNA_P-fluviatile_contig1.322.1|Name=mRNA_P-fluviatile_contig1.322.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=4020bp|location=Sequence derived from alignment at P-fluviatile_contig1:3913230..3918672+ (Porterinema fluviatile SAG_2381)back to top |