mRNA_P-fluviatile_contig1.321.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig1.321.1
Unique NamemRNA_P-fluviatile_contig1.321.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig1.321.1 vs. uniprot
Match: D8LLP4_ECTSI (Leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLP4_ECTSI)

HSP 1 Score: 409 bits (1052), Expect = 1.430e-134
Identity = 249/296 (84.12%), Postives = 260/296 (87.84%), Query Frame = 1 
Query:  262 MGNKESSHSSTFSRGQGVTSDVRDALAGLPGSAPKNKTGRKVTAQKMKTAGATGVLALQEHGLKEVPEGLFLLVKLRTLNLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPDLSALSCLTDISAGGNRLAGPVALGGLPACLTKLVLRDNRLGEVPLAVLGGLPALQTLDLSANSIEALPPLAEALXXXXXXVLDKNSLRALGDELVGLPRLKKLSAKFNRIAAVDPSSGQQAISRGLFADSAVESLELEGNVLDKVDLMQMEGVDAFLARRERNKNKNLQGGGMLTLSVCGLD 1149
            MGNKESSHSSTFSRGQG TSD RDAL  LPGSAPKNKTGRKVTAQKMKTAGATGVLALQEHGLKE+PEGLF LVKLRTLN+  XXXXXXXXXXXXXXXXXXXXXXXXXXXXIPDLSALS LTD+SAG N+LAG  ALG LPACL KLVLRDNRLGEVP AVL GLPALQ LDLSAN IE LPP    L      +LD+NSLRALGDELVGL +LKKLS + NRIAAVDP SGQQ+ISRGLFADSAVESLEL GN LDK DLM+MEGVD FLARRE+NKNKNLQGGGMLTLSVCGLD
Sbjct:    1 MGNKESSHSSTFSRGQGATSDFRDALTSLPGSAPKNKTGRKVTAQKMKTAGATGVLALQEHGLKEIPEGLFTLVKLRTLNMASXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPDLSALSSLTDVSAGSNQLAGAGALGALPACLKKLVLRDNRLGEVPAAVLDGLPALQVLDLSANGIEGLPPFGATLPALEELILDENSLRALGDELVGLSKLKKLSVRSNRIAAVDPFSGQQSISRGLFADSAVESLELAGNALDKTDLMRMEGVDDFLARREKNKNKNLQGGGMLTLSVCGLD 296
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BLAST of mRNA_P-fluviatile_contig1.321.1 vs. uniprot
Match: A0A836CA00_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA00_9STRA)

HSP 1 Score: 118 bits (296), Expect = 2.410e-26
Identity = 75/175 (42.86%), Postives = 105/175 (60.00%), Query Frame = 1 
Query:  628 DISAGGNRLA-GPVALGGLPACLTKLVLRDNRLGEVPLAVLGGLPALQTLDLSANSIEALPPLAEALXXXXXXVLDKNSLRALGDELVGLPRLKKLSAKFNRIAAVDPSSGQQAISRGLFADSAVESLELEGNVLDKVDLMQMEGVDAFLARRERNKNKNLQGGGMLTLSVCGLD 1149
            D++A  N L  G  A+  LP  L+KL L  N+L +VP A+  GLPALQ  +LS+N+I +L  L   L      + D N +  +   +  L RLK LS + N I + D S GQ  +++ LF  +AV  L LEGNV+ K  L+ M+GV  F+ RRER+K+K+L GG +L  S+CGLD
Sbjct:   66 DLNAARNELGLGGDAVPCLPTTLSKLDLSSNKLSQVPAALAAGLPALQICNLSSNAITSLAGLG-GLPALEELLADDNQIAVIEPSIRELRRLKTLSLRSNCIGS-DLSRGQP-LAQELFECTAVVVLNLEGNVITKTQLLDMQGVSKFMERRERSKDKSLAGGALLNFSLCGLD 237
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BLAST of mRNA_P-fluviatile_contig1.321.1 vs. uniprot
Match: A0A7S2EAS0_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EAS0_TRICV)

HSP 1 Score: 115 bits (288), Expect = 6.020e-25
Identity = 89/269 (33.09%), Postives = 123/269 (45.72%), Query Frame = 1 
Query:  394 QKMKTAGATGVLALQEHGLKEVPEGLFLLVKLRTLNLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--IPDLSALSCLTDISAGGNRLAGPVALGG-----------LPACLTKLVLRDNRLGEVPLAVLG-GLPALQTLDLSANSIEALPPLAEALXXXXXXVLDKNSLRALGDELVGLPRLKKLSAKFNRI---AAVDPSSGQQAISRGLFADSAVESLELEGNVLDKVDLMQMEGVDAFLARRERNKNKNLQGGGMLTLSVCGLD 1149
            QK++TA  TG+L+L+EH L +VP+ ++ L  LRTL+L                                +  +S LS L  +SAGGNRL  P    G           LP  L +L L  N    VP  +    L  L+ LDLS N +  +P     L       LD NS+ +L +E+  L +LK LS + N I   + V      Q I   LF ++ V  L L GN +    L   +G   FL RR + KNKN+ GG +  L+VCGL+
Sbjct:    1 QKIETAQKTGILSLREHKLDDVPDSVYELSNLRTLDLSKNNLTVLGRNLVNLANLKSLNCDSNKLQPGSLAPVSRLSKLQTLSAGGNRLGEPSRTEGPSQPQPEPLPSLPVSLKQLKLDTNFFSSVPPQICNPSLVKLEKLDLSFNFLATIPAGIAYLTSLVDINLDSNSIVSLPEEIGQLKKLKALSLRNNHIQVHSTVFSEKNPQPIPESLFTNTLVIDLNLHGNKMTNTQLNDFQGFHFFLERRTKVKNKNVYGGALTDLNVCGLE 269
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BLAST of mRNA_P-fluviatile_contig1.321.1 vs. uniprot
Match: A0A225UJM0_9STRA (Putative LRR protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UJM0_9STRA)

HSP 1 Score: 110 bits (276), Expect = 3.520e-23
Identity = 123/277 (44.40%), Postives = 154/277 (55.60%), Query Frame = 1 
Query:  355 SAPKNKTGRKVTAQKMKTAGATGVLALQEHGLKEVPEGLFLLVKLRTLNLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPDLSALSCLTDISAGGNRLAG-PVALGGLPACLTKLVLRDNRLGEVPLAVLGGLPALQTLDL------------SANSIEALPPLAEALXXXXXXVLDKNSLRALGDELVGLPRLKKLSAKFNRIAAVDPSSGQQAISRGLFADSAVESLELEGNVLDKVDLMQMEGVDAFLARRERNKNKNLQGGGMLTLSVCGL 1146
            S PKN   R V  QK+K+A ATGVLAL    LK++P+ L+ L  LR+L+L XXXXXXXXXXXXXXXXXXXXXXXXXX   +PDLS L  LT +   GN L   P+AL   P  L KL L+ N+L  VP ++L  L  LQ LDL            S N+++ LP     +  XXXX                       SA+ N +      +  Q I+  L  DSAV+ + L+GN + K DL  M+G DAFL RR + KNK + GG    LS+CGL
Sbjct:   17 SKPKNS--RSVQQQKLKSAKATGVLALPNSKLKKLPDELWQLSTLRSLDLSXXXXXXXXXXXXXXXXXXXXXXXXXXLAALPDLSPLQALTTLVLDGNVLEDLPLAL---PPNLIKLSLKGNKLRAVPRSILS-LVHLQELDLIXXXXXXXXXXXSDNALDLLPANLGEMQEXXXXXXXXXXXXXXXXXXXXXXXXXXXSARRNSLVGKSAGAKTQPIAAQLLQDSAVQVMNLDGNPMTKEDLQAMDGFDAFLTRRTKLKNKEIHGGLNSDLSLCGL 287
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BLAST of mRNA_P-fluviatile_contig1.321.1 vs. uniprot
Match: H3GRI1_PHYRM (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=H3GRI1_PHYRM)

HSP 1 Score: 109 bits (273), Expect = 6.950e-23
Identity = 127/267 (47.57%), Postives = 150/267 (56.18%), Query Frame = 1 
Query:  355 SAPKNKTGRKVTAQKMKTAGATGVLALQEHGLKEVPEGLFLLVKLRTLNLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPDLSALSCLTDISAGGNRLAG-PVALGGLPACLTKLVLRDNRLGEVPLAVLGGLPALQTLDLSANSIEALPPLAEALXXXXXXVLDKNSLRALGDELVGLPRLKKLSAKFNRIAAVDPSSGQQAISRGLFAD-SAVESLELEGNVLDKVDLMQMEGVDAFLARRERNKNKNLQGGGMLTLSVCGLD 1149
            S PKN   R V  QK+++A ATGVLAL    LK++PE L  L  LRTL+LXXXXXXXXXXXXXXXXXXXXXXXXXX    +PDLSAL  LT +   GN L   P AL   P  LTKL L+ NRL  VP +VL  L  LQ                   XXXXXX                  +LK LSA+ N +      +  Q I+  L  + SAV+ + LEGN L K DL  M+G DAFL RR + KNK + GG    LS+CGL+
Sbjct:   17 SKPKNN--RSVQQQKLRSAKATGVLALPNSKLKKLPEELLELSTLRTLDLXXXXXXXXXXXXXXXXXXXXXXXXXXVLVTLPDLSALEALTTLVLDGNLLEDIPSAL---PPNLTKLSLKGNRLRAVPRSVLE-LAQLQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLKVLSARRNTLVGRSAGAKVQPIAAELLGEGSAVQVMNLEGNPLTKEDLQGMDGFDAFLTRRTKLKNKEIHGGLNSDLSLCGLE 277
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BLAST of mRNA_P-fluviatile_contig1.321.1 vs. uniprot
Match: A0A5D6XNJ4_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XNJ4_9STRA)

HSP 1 Score: 105 bits (261), Expect = 2.300e-21
Identity = 86/261 (32.95%), Postives = 113/261 (43.30%), Query Frame = 1 
Query:  370 KTGRKVTAQKMKTAGATGVLALQEHGLKEVPEGLFLLVKLRTLNLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-IPDLSALSCLTDISAGGNRLAGPVALGGLPACLTKLVLRDNRLGEVPLAVLGGLPALQTLDLSANSIEALPPLAEALXXXXXXVLDKNSLRALGDELVGLPRLKKLSAKFNRIAAVDPSSGQQAISRGLFADSAVESLELEGNVLDKVDLMQMEGVDAFLARRERNKNKNLQGGGMLTLSVCGLD 1149
            K  R V  QK+K+A ATGVLAL +H LK++P  L  L  LR+L++                               +PDLSAL+                    LP  LTKL L++NRL E+PL+V   L  LQ LD+S N + ALP    AL     X                            R+       G   I+R +  DS V  + LEGN + K DL  M+G + FL RR + KNK + GG    +S+CGLD
Sbjct:   20 KQTRSVLQQKLKSAAATGVLALPDHKLKQLPRELLELANLRSLDVSSNRLAELPRDFAAALPQLRTLKLAGNALTALPDLSALTXXXXXXXXXXXXXXXXE--ALPPNLTKLSLKNNRLRELPLSVTR-LAQLQELDVSGNELAALPEHVGALASLVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRL-------GPHGIAREVLTDSGVHIMNLEGNPMSKFDLEAMDGFERFLERRTQAKNKEIHGGLSADVSLCGLD 270
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BLAST of mRNA_P-fluviatile_contig1.321.1 vs. uniprot
Match: A0A662XQF7_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XQF7_9STRA)

HSP 1 Score: 100 bits (248), Expect = 1.700e-19
Identity = 121/273 (44.32%), Postives = 146/273 (53.48%), Query Frame = 1 
Query:  355 SAPKNKTGRKVTAQKMKTAGATGVLALQEHGLKEVPEGLFLLVKLRTLNLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPDLSALSCLTDISA-------GGNRLAGPVALGGLPACLTKLVLRDNRLGEVPLAVLGGLPALQTLDLSANSIEALPPLAEALXXXXXXVLDKNSLRALGDELVGLPRLKKLSAKFNRIAAVDPSSGQQAISRGLFAD-SAVESLELEGNVLDKVDLMQMEGVDAFLARRERNKNKNLQGGGMLTLSVCGLD 1149
            S PKN  G  V  QK++TA ATGVLAL +  LK++P+ LF L  LR+L+ XXXXXXXXXXXXXXXXXXXXXXXXXXX   +PDLSAL+ LT +          GN L        LP  LTKL L+ NRL  VP +++  L  L+                   XXXXXX                       SA+ N +        +Q I+  L  D S V+ L LEGN + K DL  MEG DAFL RR + KNK + GG    LS+CGLD
Sbjct:   21 SKPKNSRG--VQQQKLRTARATGVLALPDSKLKKLPDELFTLSALRSLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXIATLPDLSALTALTTVRVLCLKLVLDGNALED--LPNALPPNLTKLSLKGNRLRTVPHSIVA-LTQLREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSARRNTLVGRSAGGSEQPIAAELLGDGSTVQVLNLEGNPMTKEDLQTMEGFDAFLTRRTQLKNKEIHGGLNSDLSLCGLD 288
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BLAST of mRNA_P-fluviatile_contig1.321.1 vs. uniprot
Match: A0A6A3UTM1_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3UTM1_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 2.100e-18
Identity = 117/263 (44.49%), Postives = 142/263 (53.99%), Query Frame = 1 
Query:  364 KNKTGRKVTAQKMKTAGATGVLALQEHGLKEVPEGLFLLVKLRTLNLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPDLSALSCLTDISAGGNRLAGPVALGGLPACLTKLVLRDNRLGEVPLAVLGGLPALQTLDLSANSIEALPPLAEALXXXXXXVLDKNSLRALGDELVGLPRLKKLSAKFNRIAAVDPSSGQQAISRGLFA-DSAVESLELEGNVLDKVDLMQMEGVDAFLARRERNKNKNLQGGGMLTLSVCGLD 1149
            K KTGR V  QK+K+A ATGVLAL    LK++PE L  L  +RT   XXXXXXXXXXXXXXXXXXXXXXXXXXXX  +PDLS L  LT +    N L        LP  LTKL ++ N+L  VP +VL  L  LQ                   XXXXXX                       SA+ N +      +  Q+I+  L   DS+V+ + LEGN + K DL  M+G DAFL RR + KNK + GG    LS+CGL+
Sbjct:   18 KPKTGRSVQQQKLKSAKATGVLALPNSKLKKLPEELLELSAMRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSLPDLSGLEALTTLVLDCNMLED--IPNALPPNLTKLSIKGNKLRAVPRSVLE-LAQLQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSARRNTLVGRSAGAKVQSIAAELLGEDSSVQVMNLEGNPMTKEDLQGMDGFDAFLTRRTKLKNKEIHGGLNSDLSLCGLE 277
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BLAST of mRNA_P-fluviatile_contig1.321.1 vs. uniprot
Match: K3X5X7_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X5X7_GLOUD)

HSP 1 Score: 96.7 bits (239), Expect = 2.100e-18
Identity = 114/263 (43.35%), Postives = 145/263 (55.13%), Query Frame = 1 
Query:  364 KNKTGRKVTAQKMKTAGATGVLALQEHGLKEVPEGLFLLVKLRTLNLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPDLSALSCLTDISAGGNRLAGPVALGGLPACLTKLVLRDNRLGEVPLAVLGGLPALQTLDLSANSIEALPPLAEALXXXXXXVLDKNSLRALGDELVGLPRLKKLSAKFNRIAAVDPSS-GQQAISRGLFADSAVESLELEGNVLDKVDLMQMEGVDAFLARRERNKNKNLQGGGMLTLSVCGLD 1149
            K K  + V  QK+K+A ATG+LAL +H LK+VP  +  +  LRTL+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXX +PDLS L  LT +   GN L        LP  LTKL L  N+L E+P+AV   L  L+ L                 XXXXXX                        A+ N++   + ++   Q+I+  L + S V  + LEGN + K DL  M+G D F ARR  +KNK + GG    +S+CGLD
Sbjct:   18 KPKQSKSVMQQKIKSAQATGMLALSDHKLKKVPPEVVAMPLLRTLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLPDLSGLVGLTTLVLDGNALE--CIPSALPPNLTKLSLMGNKLREIPVAVTN-LKLLKELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARANKLTGKEAAAPAPQSIAAELLSASNVHIMNLEGNPMTKFDLEDMDGFDKFFARRTESKNKEIHGGLNADVSLCGLD 277
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BLAST of mRNA_P-fluviatile_contig1.321.1 vs. uniprot
Match: A0A067D9M8_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067D9M8_SAPPC)

HSP 1 Score: 93.6 bits (231), Expect = 1.840e-17
Identity = 109/259 (42.08%), Postives = 144/259 (55.60%), Query Frame = 1 
Query:  373 TGRKVTAQKMKTAGATGVLALQEHGLKEVPEGLFLLVKLRTLNLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPDLSALSCLTDISAGGNRLAGPVALGGLPACLTKLVLRDNRLGEVPLAVLGGLPALQTLDLSANSIEALPPLAEALXXXXXXVLDKNSLRALGDELVGLPRLKKLSAKFNRIAAVDPSSGQQAISRGLFADSAVESLELEGNVLDKVDLMQMEGVDAFLARRERNKNKNLQGGGMLTLSVCGLD 1149
            T + V A K++ A ATG+L+L    LK +P+ +F + KL TL+L     XXXXXXXXXXXXXXXXXXXXXXXXX+PDLSAL+ LT++    N+LA    L  LP  LTKL  R+N+L  +P   L  L  L+++D+S              XXXXXX                             +       G Q+I+  + A SAV  ++LEGN + K DL  M+GVDAFL RR+  K+K L GG    +++CGLD
Sbjct:   17 TKKSVQATKIERAKATGILSLHGCKLKRIPDDVFGIEKLNTLDLSNNELXXXXXXXXXXXXXXXXXXXXXXXXXLPDLSALTKLTNLVLDNNKLA---TLQALPMGLTKLSARNNQLLALP-PTLCCLSQLESVDVSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL-------GPQSIAASILAASAVHIMQLEGNPMSKFDLEAMDGVDAFLLRRKELKDKELHGGLNTDVTLCGLD 264
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.321.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
D8LLP4_ECTSI1.430e-13484.12Leucine rich repeat protein n=2 Tax=Ectocarpus Tax... [more]
A0A836CA00_9STRA2.410e-2642.86Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2EAS0_TRICV6.020e-2533.09Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A225UJM0_9STRA3.520e-2344.40Putative LRR protein n=1 Tax=Phytophthora megakary... [more]
H3GRI1_PHYRM6.950e-2347.57Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]
A0A5D6XNJ4_9STRA2.300e-2132.95Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A662XQF7_9STRA1.700e-1944.32Uncharacterized protein (Fragment) n=2 Tax=Nothoph... [more]
A0A6A3UTM1_9STRA2.100e-1844.49Uncharacterized protein n=5 Tax=Phytophthora TaxID... [more]
K3X5X7_GLOUD2.100e-1843.35Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A067D9M8_SAPPC1.840e-1742.08Uncharacterized protein n=1 Tax=Saprolegnia parasi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:3903740..3909028 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score411.0
Seed ortholog evalue4.7e-112
Seed eggNOG ortholog2880.D8LLP4
Preferred nameLRRC57
EggNOG free text desc.regulation of response to stimulus
EggNOG OGsCOG4886@1,KOG0619@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionLeucine rich repeat protein
Ec32 orthologEc-04_004990.1
Exons6
Model size2348
Cds size891
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.321.1prot_P-fluviatile_contig1.321.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig1 3904001..3907832 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815321.0310032-UTR-P-fluviatile_contig1:3903739..39040001622815321.0310032-UTR-P-fluviatile_contig1:3903739..3904000Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 3903740..3904000 +
1693561493.1941411-UTR-P-fluviatile_contig1:3903739..39040001693561493.1941411-UTR-P-fluviatile_contig1:3903739..3904000Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 3903740..3904000 +
1622815321.111847-UTR-P-fluviatile_contig1:3907832..39090281622815321.111847-UTR-P-fluviatile_contig1:3907832..3909028Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 3907833..3909028 +
1693561493.2620535-UTR-P-fluviatile_contig1:3907832..39090281693561493.2620535-UTR-P-fluviatile_contig1:3907832..3909028Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 3907833..3909028 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815321.0441823-CDS-P-fluviatile_contig1:3904000..39041191622815321.0441823-CDS-P-fluviatile_contig1:3904000..3904119Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3904001..3904119 +
1693561493.2060947-CDS-P-fluviatile_contig1:3904000..39041191693561493.2060947-CDS-P-fluviatile_contig1:3904000..3904119Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3904001..3904119 +
1622815321.0578063-CDS-P-fluviatile_contig1:3904726..39048381622815321.0578063-CDS-P-fluviatile_contig1:3904726..3904838Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3904727..3904838 +
1693561493.215776-CDS-P-fluviatile_contig1:3904726..39048381693561493.215776-CDS-P-fluviatile_contig1:3904726..3904838Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3904727..3904838 +
1622815321.0712528-CDS-P-fluviatile_contig1:3905393..39054921622815321.0712528-CDS-P-fluviatile_contig1:3905393..3905492Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3905394..3905492 +
1693561493.2244613-CDS-P-fluviatile_contig1:3905393..39054921693561493.2244613-CDS-P-fluviatile_contig1:3905393..3905492Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3905394..3905492 +
1622815321.0819614-CDS-P-fluviatile_contig1:3905810..39059871622815321.0819614-CDS-P-fluviatile_contig1:3905810..3905987Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3905811..3905987 +
1693561493.2317898-CDS-P-fluviatile_contig1:3905810..39059871693561493.2317898-CDS-P-fluviatile_contig1:3905810..3905987Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3905811..3905987 +
1622815321.0912426-CDS-P-fluviatile_contig1:3906793..39069881622815321.0912426-CDS-P-fluviatile_contig1:3906793..3906988Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3906794..3906988 +
1693561493.2399352-CDS-P-fluviatile_contig1:3906793..39069881693561493.2399352-CDS-P-fluviatile_contig1:3906793..3906988Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3906794..3906988 +
1622815321.1006145-CDS-P-fluviatile_contig1:3907643..39078321622815321.1006145-CDS-P-fluviatile_contig1:3907643..3907832Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3907644..3907832 +
1693561493.2482646-CDS-P-fluviatile_contig1:3907643..39078321693561493.2482646-CDS-P-fluviatile_contig1:3907643..3907832Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3907644..3907832 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig1.321.1

>prot_P-fluviatile_contig1.321.1 ID=prot_P-fluviatile_contig1.321.1|Name=mRNA_P-fluviatile_contig1.321.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=297bp
MGNKESSHSSTFSRGQGVTSDVRDALAGLPGSAPKNKTGRKVTAQKMKTA
GATGVLALQEHGLKEVPEGLFLLVKLRTLNLSSNSLKLLPAAMNSLTKLK
TLRLDANKLETIPDLSALSCLTDISAGGNRLAGPVALGGLPACLTKLVLR
DNRLGEVPLAVLGGLPALQTLDLSANSIEALPPLAEALPDLAELVLDKNS
LRALGDELVGLPRLKKLSAKFNRIAAVDPSSGQQAISRGLFADSAVESLE
LEGNVLDKVDLMQMEGVDAFLARRERNKNKNLQGGGMLTLSVCGLD*
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mRNA from alignment at P-fluviatile_contig1:3903740..3909028+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig1.321.1 ID=mRNA_P-fluviatile_contig1.321.1|Name=mRNA_P-fluviatile_contig1.321.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5289bp|location=Sequence derived from alignment at P-fluviatile_contig1:3903740..3909028+ (Porterinema fluviatile SAG_2381)
CGAGCACGACCGGAACCTCCGAGCGAAACACAAAAAAGTAGGGAGAGCCG
TGGGAAACGACGAAACAAGATCGGGGACGACTGAGCACAGGGTGGGTAGC
CGTAGCAGCTCAAACGCCGGGAAAACAATCGTGAGAGAAACAGCCCAGCA
GTTCGAAACGGGCACACAGCATTCAGCGCGACTTCAACTTCACCCAGCCC
GAGGGAAAGAGGAGAGGTCCGAGTGAGAGGATCTGCTAGCGGCACTTACA
GAAGGGGCGGCATGGGGAACAAGGAGTCATCCCATTCTTCCACCTTCTCC
AGAGGGCAGGGTGTCACATCCGACGTGCGGGATGCGCTCGCGGGCTTGCC
CGGCAGTGCTCCCAAAAACAAGACGGGGAGGTGGGAGGAGACATGCATAC
ATGATGTCTACAGCTTGTTGTTCACGCAGCCCTATCCTTAGACACCATAA
ACTCGATTAGAGTGGCACCCCTTGCGCCGTGTGATCTGTTGTCGGGGATT
GTTTGCAAGGGAGGCGTGTGTTAGGGAGCTTCTTGGTGCATTTCTGCAAC
TTGCGGGCGTCGGGCAAAGTATGTTTCTACGAAAAGGGTAAAGCAGCACG
AGGGTGGGGCGCGGGACTCCAAAAAGCATTCTCTCCGCCGCAACCCTGTC
TCGCGTGTATTTGCGATGTGTACGGGTGGTTATGCCTCCGTTTCCAACTG
CGATCAGAGAACTTATCTTCCCGTTGACCCTGCAACGATGAGAATGAAAG
GAAAAGTCCTTTCTCCGTCTGTCTCTCGCTCCGCGTGTCTCCCCTTTCAA
TTTGTGTTGGTCTGGCGCTTCCCTCTCCTCTTGCACACTTGGAGGACCGT
GGGTGCACGCCATTCTGGCGAGTGGCATTGCGCAGCATCTCCTCATCAAA
CCCACGCCCTTGACTCCGATCCTGTTCGTACCAGTGGCCATCGTAATAGC
TGAACGCTCATCCTGCAATCACCCCCACCTCACGCAGGAAGGTGACTGCT
CAAAAGATGAAGACCGCGGGAGCCACGGGCGTGCTGGCGCTCCAAGAACA
CGGCCTCAAGGAGGTTCCCGAGGGCTTATTTCTACTCGTCAAGCTCAGGG
TAAGAGACGGAAGGAGGGAGGGAGGGAGGTCGAACTGCGAGCTGCGCGCG
TGGAGACGATGAGGCGTTGTTGCCTTTCGTTTACGTGGCAAGGAGAGGAC
GAATGCTCAACAGAATCAAGCACCCCCTTGGTTGCGATTTGCCGATGCAG
GTCGATGGTGGCTCGCGAGGGACAGTTTATTGTATGACAAAGCTCTTCGA
CCGATTAAGTCGCGAGCGCCTGGTTCGAGACCGGGGAATCCCTTGTAGAA
ACGTTATGCGCTGTCAGGGAACCCTCCTGTTCGGGTTTTCTGTCGTTGTT
CGAACGGTTTGCCCTAACTCGCCGATCTCAAGGAGCTTGAAGCGTTGCCC
CCCCCCGCAGTCATGCGCTCTCGTTCGACATTTTCCTAAGCAATTGCGCG
ACTGCCTTCCCCTGGTATTGTCGAATGGGCTGCTGCCATCGATAGTCAGT
CGTTGGGTCCGAGTTCCATCCCCCTCGTTGCCCCTCCTTGTCAAAATGGG
TAGCTCACCTGCTGTCCGACTTTTTGTATTTGCTTCTTCTTTTCGTCTCC
GCAGACGTTAAACTTGTCGTCGAACTCCCTCAAGCTTCTGCCTGCGGCGA
TGAATAGCCTGACCAAGCTCAAGACCTTGCGGCTCGATGCCAACAAGCTC
GAGGTGCGCGCGCGTGCGCTTCGGGAATATTCATTTGAAGCTGTCACGTG
AGCAGGTGGGCTCCTTCTCTTTCATGACTTTAGCTCCGCTGTTACGCCCA
ATCAACCGGCGCCTCGTCTTGCGCAGACCATGAAGTCAAAATAAGCTCGA
GGTCGCTTTTAAGCGTGCCTAAACTCCTTCCAATCAACTGGTGCCCTGTC
TTGTGCAGATAATGAAGCCACAGTAAGCCCCGTTGTCGCCAGAAAATCAC
TCCCTCCACGCTCCTCCACCCTCCCCCCCACTCCTTCCCTTCCCCGGCGC
ACGTGCGCGGTCCCTACTCAGACGATTCCTGACCTGAGCGCGCTGTCTTG
CCTGACGGATATCTCCGCGGGAGGGAACCGCCTGGCGGGGCCGGTGGCGC
TGGGGGGGCTGCCGGCGTGCCTGACCAAGCTTGTCCTACGAGACAACAGA
CTGGGGGAGGTGCCCCTGGCGGTGCTGGGAGGTCTTCCCGCGCTTCAGGT
AAGCGCACTTGTGCGGTCTTCTATCGCGTCCGTGTTTACGACCCTCCTTT
GTCGAAAAAGCTGCGCTGATTACCCGCCCCGCCTCCCCCCCCGGCTGGGG
ACAAAAAGTGAACTTCTCCCCCCGGAATAGAAAGGACTGTTTACGATGTG
CGAACCCTCCGTAATTTTTCCCGCCGGGACTTGGAGGTCTGATTTTCTTC
ATGTGCCCGGAGGATGTCGATGTGCATCGGCCCGTGCATGTCGAAAAATG
TTGCAGAGGTGCCGGGTAGGGCGTGCGGGGAAGTTGGGGTCACAACAGGG
ACTCCCGTTTGGAGTGCAGATCGTCCCATGGTCGTCCACTAGGGAGCTTG
ACGATGTGCAAGTTCTCCAGCCCATTGCCTGGGGACACCGGTTATACTCC
GGACAGTCAACAAACCGTGCTCTTCACACACCGAGCGGCAGCAGCAGCAG
CTGATTACCGACGCTTTTTACCCCAAAGATTTAATTCGAATGGAGGCCGA
CAGCCGCTTCCTGTCGGAAACACGCCGTCTAGGCATTTTCGTCATGCGGG
GAGGGAGTAATATCTTGCAAGTGTCTCGACGGGTTTTAAGGTACAAACTT
ACAAGAGATAGTTTTGCGTGAGGAAAGCGGCCAGCGAAGTCCATACATTT
CAGGAAGTGTTCAGGTTGCTTCCATTGAACGGCGCAATATTTGAAACGTG
TCGTCCTTACAAGTTCATGGAATAACGCCTGGTAGCTAGTGAACGAGAGA
AGAGTGAACATTTCCGGCTGCCTACTCTGCCGGGTGCGGTTCCCCCTTTT
TCAGACGCTGGACCTATCGGCGAACTCAATTGAAGCTCTGCCGCCCCTGG
CCGAGGCATTGCCGGATTTGGCGGAGCTGGTCCTGGACAAGAACTCGTTG
CGGGCGCTAGGGGACGAGCTAGTGGGCCTGCCAAGGCTCAAGAAGCTCTC
GGCGAAATTTAATCGCATCGCGGCGGTTGATCCTTCGAGCGGACAGCAGG
TGAAGAGAATGCCAGAGAGGGTTGTTGCTACTGTTGTTATTGATGATGTT
GGTCTTCTTGTTCTTGTTGTTCTTGTTGTTCTTGTTGTTCTTGTTCTTGT
TCTTCTTCTTGTTCTTGTTCTTGTTCTTCTTGTTCTTGTTCTTGTTCTTC
TTGTTCTTCTTGTTCTTCTTGTTCTTCTTCTTCTCTTGCTTATTCTTGTC
GCCGTATCGCATTCATATACTTTTCACTACGGCTTCTGCCAGGGGAGGGC
ACAAATGATGGCCGAATGACTCTTTCAGTGTCATTCCCTTTCAGGCTTGC
GATTAGTATTCACATGTGTGTGTGCTTTCTTTCCCTTGATGGCCGGGTGC
CCCTCAACCGTGCGCGCACACACTCTAAGCTAAGCCGCGTGCGGTCTCTG
GAGGAAGTTCACGACCAAGGTGTTGGCGATTCCAGGCGAATTGTCGAGAG
GGCTTCCGTCCCTCGGGTGCACAGCTTTGCCTCTGCGCTGCCTTCAAGTG
AAAAAAGCCCAATTTGATCGCTGCGAGCAAGTCCCGAATCGCTGACGAAT
AGCTGCCCTATTGCGCACTCATCTCTTCTCGTCCCTTCGGAACACAACAC
ACACACACGCATGGGAATCGCGGCTGGCTCGCTGGCTGACCACTACACGC
GAAGGCCATCTCCCGCGGGCTGTTCGCCGATTCTGCGGTGGAGTCGCTGG
AGCTGGAAGGCAACGTCTTGGACAAGGTGGACCTCATGCAGATGGAAGGG
GTGGACGCCTTCCTGGCCCGCCGAGAGCGGAATAAGAACAAGAACCTGCA
GGGCGGCGGGATGCTGACCCTCTCCGTCTGCGGCCTGGACTGATCTGGCT
TCCTTTTGTGCTTGTTATGCGTCAAGACCGCCCCCTTGCCGCATCGGGGA
GTTTTCGTGCGTATGGCCGCCCTTCCGTCATCGTGACATGTGATTGGTTT
TTGCTCGTGTACGCTCAATGGCGTTTGACGCTCCCCTGTATTGCGGCCCC
GAAAAGTTTTTGTAAACAATTCAGCTCTGACGGAATCCTTTTTTTTTTCT
TCAAGTCAACGCTGTTGAAGCAAGTTTTTCTCGTGCGTTCCACTTGCTTG
GCGGGATATGGTGGTACGCCTTGACGCTATGGCGATGTTGGCCCGAGACC
TGCGCCCAAGCTTTGCACAAATGGCCCGTCTTGGAATACTTCCTATTCTT
CCAGGCCCGCTCCCCCCCCCCACGCCCCCGGATGTGGGACTCGTGAAGGC
TTGCCGTGAAAGTTTCGTGCAATAAGTATTCCAAGGAATCAACCCGAAGC
CTTGCGACGCAGGTGGTACAAGCAGAGGATCGTAGGGACATGGAAAGGTC
ACCAGCACGCTAGATTCGAAAATCGCTGCCTCAGTGGCGAGCCTCGCGAA
TGGCTAGGTTTGGGGTTTTCTTATTGTTGTTCCTCGCAGTTTGGCTAAAC
CACTTTTTTTCTTTCGAGCTGCGTCTACTGGTGTGCAGCGATTGCTGCTT
TTGTCCTGCATACCCCTTTTTTTTGCCCTTTCATCCCCTCAGTTTCTTTT
CTGCTGCGCCTTGTACTTCGGGGCTGTTCGTGCCCGTGCTAGTTCCCAGA
TTATTCCCCGCGTGTGCTGCACGAATCCAGCAGGACCTTCCCGCTTGTCA
AAACGGCGTTTGTTTTTCATCACTCAAGGTTTTCGCTTTCGTAGCACACA
GCATGTAGACTGCATCCAGGCGGACGTTGTCTTGAGGGTGTTGAGAAGAC
GAGGATGCGACGTGCTCTTGTGCCCCACCTTGCCCCCCGCCTCGAGAGGG
GTGCCCGGTTGGAGGCCACGCGACGTTGAGGCAACCAGCGATTGAGGGCG
ATCTCTCCACCCATGCCGTGGTTGTTGTGTTCTTAGTTTGGTCGCAGAGA
TCCCACTCTACTCGGAAGCAGTTTCGCTTTCTCGTCTCCGTTGCGGAGCA
TGTCCCAGAAAAAATACTCGTCGGCGGGGGCTTCACTCGCCCAGCCAGCA
TCCACCGGTTTTGTGCAATTTTTAGTTGTTGTCGAGGGC
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Coding sequence (CDS) from alignment at P-fluviatile_contig1:3903740..3909028+

>mRNA_P-fluviatile_contig1.321.1 ID=mRNA_P-fluviatile_contig1.321.1|Name=mRNA_P-fluviatile_contig1.321.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1782bp|location=Sequence derived from alignment at P-fluviatile_contig1:3903740..3909028+ (Porterinema fluviatile SAG_2381)
ATGGGGAACAAGGAGTCATCCCATTCTTCCACCTTCTCCAGAGGGCAGGG
TGTCACATCCGACGTGCGGGATGCGCTCGCGGGCTTGCCCGGCAGTGCTC
CCAAAAACAAGACGGGGAGATGGGGAACAAGGAGTCATCCCATTCTTCCA
CCTTCTCCAGAGGGCAGGGTGTCACATCCGACGTGCGGGATGCGCTCGCG
GGCTTGCCCGGCAGTGCTCCCAAAAACAAGACGGGGAGGAAGGTGACTGC
TCAAAAGATGAAGACCGCGGGAGCCACGGGCGTGCTGGCGCTCCAAGAAC
ACGGCCTCAAGGAGGTTCCCGAGGGCTTATTTCTACTCGTCAAGCTCAGG
GAAGGTGACTGCTCAAAAGATGAAGACCGCGGGAGCCACGGGCGTGCTGG
CGCTCCAAGAACACGGCCTCAAGGAGGTTCCCGAGGGCTTATTTCTACTC
GTCAAGCTCAGGACGTTAAACTTGTCGTCGAACTCCCTCAAGCTTCTGCC
TGCGGCGATGAATAGCCTGACCAAGCTCAAGACCTTGCGGCTCGATGCCA
ACAAGCTCGAGACGTTAAACTTGTCGTCGAACTCCCTCAAGCTTCTGCCT
GCGGCGATGAATAGCCTGACCAAGCTCAAGACCTTGCGGCTCGATGCCAA
CAAGCTCGAGACGATTCCTGACCTGAGCGCGCTGTCTTGCCTGACGGATA
TCTCCGCGGGAGGGAACCGCCTGGCGGGGCCGGTGGCGCTGGGGGGGCTG
CCGGCGTGCCTGACCAAGCTTGTCCTACGAGACAACAGACTGGGGGAGGT
GCCCCTGGCGGTGCTGGGAGGTCTTCCCGCGCTTCAGACGATTCCTGACC
TGAGCGCGCTGTCTTGCCTGACGGATATCTCCGCGGGAGGGAACCGCCTG
GCGGGGCCGGTGGCGCTGGGGGGGCTGCCGGCGTGCCTGACCAAGCTTGT
CCTACGAGACAACAGACTGGGGGAGGTGCCCCTGGCGGTGCTGGGAGGTC
TTCCCGCGCTTCAGACGCTGGACCTATCGGCGAACTCAATTGAAGCTCTG
CCGCCCCTGGCCGAGGCATTGCCGGATTTGGCGGAGCTGGTCCTGGACAA
GAACTCGTTGCGGGCGCTAGGGGACGAGCTAGTGGGCCTGCCAAGGCTCA
AGAAGCTCTCGGCGAAATTTAATCGCATCGCGGCGGTTGATCCTTCGAGC
GGACAGCAGACGCTGGACCTATCGGCGAACTCAATTGAAGCTCTGCCGCC
CCTGGCCGAGGCATTGCCGGATTTGGCGGAGCTGGTCCTGGACAAGAACT
CGTTGCGGGCGCTAGGGGACGAGCTAGTGGGCCTGCCAAGGCTCAAGAAG
CTCTCGGCGAAATTTAATCGCATCGCGGCGGTTGATCCTTCGAGCGGACA
GCAGGCCATCTCCCGCGGGCTGTTCGCCGATTCTGCGGTGGAGTCGCTGG
AGCTGGAAGGCAACGTCTTGGACAAGGTGGACCTCATGCAGATGGAAGGG
GTGGACGCCTTCCTGGCCCGCCGAGAGCGGAATAAGAACAAGAACCTGCA
GGGCGGCGGGATGCTGACCCTCTCCGTCTGCGGCCTGGACTGAGCCATCT
CCCGCGGGCTGTTCGCCGATTCTGCGGTGGAGTCGCTGGAGCTGGAAGGC
AACGTCTTGGACAAGGTGGACCTCATGCAGATGGAAGGGGTGGACGCCTT
CCTGGCCCGCCGAGAGCGGAATAAGAACAAGAACCTGCAGGGCGGCGGGA
TGCTGACCCTCTCCGTCTGCGGCCTGGACTGA
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