mRNA_P-fluviatile_contig1.31.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig1.31.1 vs. uniprot
Match: D7FXB4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXB4_ECTSI) HSP 1 Score: 105 bits (261), Expect = 1.850e-22 Identity = 80/131 (61.07%), Postives = 94/131 (71.76%), Query Frame = 2
Query: 212 GQATVAEPYNGPTXXXXXXXXXQQAVTGQAGNQGHHVXXXXXXXXXXXXXXXXXXXXIAWLSCLFCCCPIGLFAIFMSSSVNSKWRNGDFEGAHRAAEMAKKASIAAIIIGVVWQVYFYSTESYYVDSNND 604
GQA VA+PYNGPT QQAV GQAGNQ XXXXXXXXXXXXXXXXX I+ LS LFCC PIG+FA+ MS SV+SKWR GDF+GA+ A+ MAKKA+I AI++G+VW + F S VD +D
Sbjct: 39 GQAVVAQPYNGPTA--------QQAVVGQAGNQXXXXXXXXXXXXXXXXXXXXXHCCISVLS-LFCCLPIGIFAVCMSCSVDSKWRRGDFDGANSASHMAKKAAILAIMLGLVWSI-FTSVYEVNVDGTDD 159
BLAST of mRNA_P-fluviatile_contig1.31.1 vs. uniprot
Match: A0A6H5KJX4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJX4_9PHAE) HSP 1 Score: 102 bits (254), Expect = 1.750e-21 Identity = 49/66 (74.24%), Postives = 53/66 (80.30%), Query Frame = 3
Query: 723 AVLGCKMWPRKDR*---KVDRLGKTFLIHLWQSRKERLAIGDRSCGNNAPSSRGRVVNGLTTKACE 911
AVLG + W K ++DRLGKTFL HLWQSRKERLA GDRSCGNNAPSSRGRVVNGLT KAC+
Sbjct: 104 AVLGHRRWVEKAGRGIVRIDRLGKTFLSHLWQSRKERLAFGDRSCGNNAPSSRGRVVNGLTAKACK 169
BLAST of mRNA_P-fluviatile_contig1.31.1 vs. uniprot
Match: A0A6H5JCQ0_9PHAE (Uncharacterized protein n=7 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCQ0_9PHAE) HSP 1 Score: 105 bits (261), Expect = 1.990e-21 Identity = 50/66 (75.76%), Postives = 54/66 (81.82%), Query Frame = 3
Query: 723 AVLGCKMWPRK---DR*KVDRLGKTFLIHLWQSRKERLAIGDRSCGNNAPSSRGRVVNGLTTKACE 911
AVLG + W K D ++DRLGKTFL HLWQSRKERLAIGDRSCGNNAPSSRGRVVNGLT K C+
Sbjct: 197 AVLGHRRWVEKAGRDIVRIDRLGKTFLSHLWQSRKERLAIGDRSCGNNAPSSRGRVVNGLTAKTCK 262
BLAST of mRNA_P-fluviatile_contig1.31.1 vs. uniprot
Match: A0A6H5LRL5_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LRL5_9PHAE) HSP 1 Score: 108 bits (269), Expect = 5.510e-21 Identity = 55/80 (68.75%), Postives = 60/80 (75.00%), Query Frame = 3
Query: 723 AVLGCKMWPRK---DR*KVDRLGKTFLIHLWQSRKERLAIGDRSCGNNAPSSRGRVVNGLTTKACE---I*VPPPPRTRF 944
AVLG + W K D ++DRLGKTFL HLWQSRKERLAIGDRSCGNNAPSSRGRVVNGLT KAC+ + P PP F
Sbjct: 381 AVLGHRRWVEKAGRDIVRIDRLGKTFLSHLWQSRKERLAIGDRSCGNNAPSSRGRVVNGLTAKACKTQRVRPPHPPHRTF 460
BLAST of mRNA_P-fluviatile_contig1.31.1 vs. uniprot
Match: A0A6H5KVX2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVX2_9PHAE) HSP 1 Score: 106 bits (265), Expect = 1.750e-20 Identity = 51/66 (77.27%), Postives = 55/66 (83.33%), Query Frame = 3
Query: 723 AVLGCKMWPRK---DR*KVDRLGKTFLIHLWQSRKERLAIGDRSCGNNAPSSRGRVVNGLTTKACE 911
AVLG + W K D ++DRLGKTFL HLWQSRKERLAIGDRSCGNNAPSSRGRVVNGLT KAC+
Sbjct: 432 AVLGHRRWVEKAGRDIVRIDRLGKTFLSHLWQSRKERLAIGDRSCGNNAPSSRGRVVNGLTAKACK 497
BLAST of mRNA_P-fluviatile_contig1.31.1 vs. uniprot
Match: A0A6H5JE77_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE77_9PHAE) HSP 1 Score: 107 bits (266), Expect = 3.450e-20 Identity = 56/81 (69.14%), Postives = 61/81 (75.31%), Query Frame = 3
Query: 723 AVLGCKMWPRK---DR*KVDRLGKTFLIHLWQSRKERLAIGDRSCGNNAPSSRGRVVNGLTTKAC---EI*VPPPPRTRFE 947
AVLG + W K D ++DRLGKTFL HLWQSRKERLAIGDRSCGNNAPSSRGRVVNGLT KAC E + P R +FE
Sbjct: 631 AVLGHRRWVEKAGRDIVRIDRLGKTFLSHLWQSRKERLAIGDRSCGNNAPSSRGRVVNGLTAKACKTPEYVLLPGRREKFE 711
BLAST of mRNA_P-fluviatile_contig1.31.1 vs. uniprot
Match: A0A6H5JKC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKC1_9PHAE) HSP 1 Score: 102 bits (254), Expect = 4.430e-20 Identity = 49/65 (75.38%), Postives = 52/65 (80.00%), Query Frame = 3
Query: 723 AVLGCKMWPRK---DR*KVDRLGKTFLIHLWQSRKERLAIGDRSCGNNAPSSRGRVVNGLTTKAC 908
AVLG + W K D ++DRLGKTFL HLWQSRKERLAIGDRSCGNNAPS RGR VNGLT KAC
Sbjct: 247 AVLGHRRWVEKAGRDIVRIDRLGKTFLSHLWQSRKERLAIGDRSCGNNAPSYRGRAVNGLTAKAC 311
BLAST of mRNA_P-fluviatile_contig1.31.1 vs. uniprot
Match: A0A6H5JD24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD24_9PHAE) HSP 1 Score: 106 bits (265), Expect = 4.530e-20 Identity = 51/66 (77.27%), Postives = 55/66 (83.33%), Query Frame = 3
Query: 723 AVLGCKMWPRK---DR*KVDRLGKTFLIHLWQSRKERLAIGDRSCGNNAPSSRGRVVNGLTTKACE 911
AVLG + W K D ++DRLGKTFL HLWQSRKERLAIGDRSCGNNAPSSRGRVVNGLT KAC+
Sbjct: 454 AVLGHRRWVEKAGRDIVRIDRLGKTFLSHLWQSRKERLAIGDRSCGNNAPSSRGRVVNGLTAKACK 519
BLAST of mRNA_P-fluviatile_contig1.31.1 vs. uniprot
Match: A0A6H5L4L1_9PHAE (Reverse transcriptase domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4L1_9PHAE) HSP 1 Score: 106 bits (265), Expect = 5.240e-20 Identity = 51/66 (77.27%), Postives = 55/66 (83.33%), Query Frame = 3
Query: 723 AVLGCKMWPRK---DR*KVDRLGKTFLIHLWQSRKERLAIGDRSCGNNAPSSRGRVVNGLTTKACE 911
AVLG + W K D ++DRLGKTFL HLWQSRKERLAIGDRSCGNNAPSSRGRVVNGLT KAC+
Sbjct: 717 AVLGHRRWVEKAGRDIVRIDRLGKTFLSHLWQSRKERLAIGDRSCGNNAPSSRGRVVNGLTAKACK 782
BLAST of mRNA_P-fluviatile_contig1.31.1 vs. uniprot
Match: A0A6H5JJF9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJF9_9PHAE) HSP 1 Score: 105 bits (261), Expect = 9.310e-20 Identity = 51/66 (77.27%), Postives = 54/66 (81.82%), Query Frame = 3
Query: 723 AVLGCKMWPRK---DR*KVDRLGKTFLIHLWQSRKERLAIGDRSCGNNAPSSRGRVVNGLTTKACE 911
AVLG K W K D ++DRLGKTFL HLWQSRKERLAIGDRSCGNNA SSRGRVVNGLT KAC+
Sbjct: 520 AVLGHKRWVEKAGRDLVRIDRLGKTFLSHLWQSRKERLAIGDRSCGNNASSSRGRVVNGLTAKACK 585 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.31.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig1.31.1 >prot_P-fluviatile_contig1.31.1 ID=prot_P-fluviatile_contig1.31.1|Name=mRNA_P-fluviatile_contig1.31.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=70bp MSSSVNSKWRNGDFEGAHRAAEMAKKASIAAIIIGVVWQVYFYSTESYYVback to top mRNA from alignment at P-fluviatile_contig1:558307..564150- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig1.31.1 ID=mRNA_P-fluviatile_contig1.31.1|Name=mRNA_P-fluviatile_contig1.31.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5844bp|location=Sequence derived from alignment at P-fluviatile_contig1:558307..564150- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig1:558307..564150- >mRNA_P-fluviatile_contig1.31.1 ID=mRNA_P-fluviatile_contig1.31.1|Name=mRNA_P-fluviatile_contig1.31.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=420bp|location=Sequence derived from alignment at P-fluviatile_contig1:558307..564150- (Porterinema fluviatile SAG_2381)back to top |