mRNA_P-fluviatile_contig1.308.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig1.308.1 vs. uniprot
Match: D8LLN0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLN0_ECTSI) HSP 1 Score: 995 bits (2573), Expect = 0.000e+0 Identity = 792/1901 (41.66%), Postives = 1006/1901 (52.92%), Query Frame = 1
Query: 19 NVFDSFVGDGNVDGGKEKIITVGPSAWESSQKYLVDELRRLLRARDIALAEQRARHVKESVVFREQRHALAVNEPDFSEKIAKLFGWTD--AGGPSKLS-LSVSPLTPSSSLPIGSPAT--SMRGVWQDDRVVPLAG--VMKDIEMVSSTETSPRLEQ-------SGLPVVFRNSDGRSEEPKSGSSTHADPGKSRIADPTGDEEWAIAACPRCTQLRHELEVVLTDRTLAEAELVSLRRAVSLADTRWESESARVGAFRYATNEKHPDQHKDKHEGAGETTL-------SSPREPEESNFCLQEELGQIERQASLQESAATIFCVCLYSYRRNLWLPQELFLQPESELKSKDSTGLSASLSA-TIGSRARYFEDLARRRILRLGLEADLRAARAKLNDLLASAGAKQNMPEHAEGGDDRSACGKEGQDGTRRNSTWHNCKSGRATRKETQNEVAGR--DTRQ--------PPNHDLVGSAGSARVLLETAKDSEAQARPTRARGGSFQQPQHCQGR--NQGNIALLAGAHAMPSKSERGSCAQQD--KTAKPGSRQVKLEKGSRPTLENSETVTKLPSTQGHGNARGYASAKPGKGTTTNAPQKGLGRARSPRNSPGRPHSLSLPAAQLRKNPSSPRGGLRSGRSATSHSEKPNEAVKERNGSSAAADDESQLTRKTISNVG------LDDIVNCRQQSLEPSAPAAVDELVTE----KTKSSLQAAGAEAAGTKKRVVGSASKDDARREKMRAKGGQVAPDPNATISSSRPHGKPAKAKPVLRERKPMPMRLGGRARAKQASAENSIEDA-GDTVHESVRIGPCVAVGEVEELFVDTSLTWSGVGKAAEEGGDEEGETERTKWFDRGVETAAAWEGSNPQENIAFDVHDEAAVKFVHDSEAVR----SDGRRK-----DGGEDADVMQGKRGRGGADAASGPVAIRHHVDNDC--------LIPPGIMDLTEALGIEVDKLRLEKAELEDTVAQLNVAAAQLYFAEYEEMKAKCRQLKRVVSGPSSTPTCKESAFGQSCQEILHQVKKIGVNFFRRRVGGAMGANFFPDGLARTLSLIGRERVSQACQTAPIERLKPLLFAGASPPLPGTKDVHVQVAGGIDAEDEPLMEQQVYSLLGKLDLLLKQREDVLRHYHQEAEEGAREARALLALAAAQHRPGQAWGVSHPPNIRRLIAGREGPAGAPRPAINPTNILFTAAVVLDSAAAAAAGDTPQPF--HVTTSEAAAKGGCGDGNRRQRFSLAERALMELANEIVAALEVEQRRSDAAAERRRFCVERHSSVSDGADKHGEGGGTQMLGRPAVGVPPLIWAMDIHLVGKLARAFQTAVEARGFEREVEDANLVAAVSLGRSPTSVAEGGKCEGGPPWHLAHRALSVVRAEGDEEEKKRRERARVDFEREKG--RVAQKQEQQRSFDWGIDPYSPRGMPHRSKGGPDGTVAFRAH--SSGTSSPTRTDGLARAEQPRRQPTKGR-GYAGGSH-----------EGSTLEPRSAQQRNDRGTGVAGARRNPQVQQXXXXXXXXXGKDTGAAARVEAAVFNTVRPSRLHVRPGSASVESRSGRVASERYYSAPAASPDRVRPRPHSARLAEPGDNFTTDDRRWIAREHTAAT--CDGTPPESRERRVDGR------GGKQPVRPIVNSFA--------GPDNAGGRVIDTRIWSSTKNATARGAGVFRCRPNNIVRATSVRFDSDGVPDGTSSPPLIPTHSGEVPEFLRRKERELVKFNREKWEAVNGRFTV---------------------GSHGADETHRIRFVSESNSSQERIEYRSSGRSTNESYGEKREAATTNYGCGAGRGDRVLSSVRLEDSMDGEGLLPDAGEQAFFDAWKPTGYEIDLSRYD 5364
N F SF GD + G +KI+T GPS W+S+Q LV ELR L+ ARD+ALAEQRARHVKES++ REQ+ LA ++P F K AKL D AGGP+ S LSVSP+T + PI + A ++ +D G + + + ++ T P + +G + F G + + S P I +EE C RC +L+HEL LTDRTL EAELVSLRRA S DT WE ESA R + H G G T ++PR P C EELG ++ L + ES + D + L A + S ++L+RRR+LRLG EADLRAARAKL+ LL +A P+ A+G +R G ++N + H R +E AG+ DT+Q PP + + G + S A R R RG S Q +G N+ ++ A P K GS + T + + + ++E G P+ +++ +L T+G G G + K + R P+ RPH P ++ N ++ R + + +++ ++G+ A DE+ + S G D V + EP P E+ + K + A GT K+ G A++ + KG V PN G+ AK K P R +Q S E + EDA G ++ S + P V V E+E++ G+A + G G E D +TA EG + +E V + R S +RK DGGE D + + G G + G A+ D D L G++DL E L +EVDKLRLEKAELEDT+AQLNVAAAQLY EYE+MKAKCRQLKRVV GP+S P ESA+G SCQE++H++K IGV FFRRR+GG MG FFPDGLAR L+LIGR R++Q QTAP++RL PL G SP LP ++DVHVQVAGGID EDEPLMEQQVY LLGKLDLLLK+REDVL YH+EAEEGAREARALLA AAAQH PGQAWGVS PPN+R+LI GREGPAGAPRPAINPTN+LFTAAVVLDS AAAAAG TP+P T E G +RRQR+S AE+AL+ELA+E+VAAL+VEQRRSDA+AERRR V+RH++ D Q LGRP +GVPPLIWAM+IHLVGKLARAF+TAVEARGFEREVEDANLVAAV+LGRS + GGK + GPPWHL HR LSV+R + +EEE++R +RAR +FE + A Q +Q+ F WG D YSPR + +R G GT + SS T+SP R +GLAR +Q R TKGR G G H GST E ++ QQ + T V G R+ Q Q +D+ A ARVEAAVF+TVRPSRLH RPGSAS E RSGRV +Y + R RP SARL E D F + R HT A+ S R +G G ++PVR + + A P +AGGRV+DTR WSS N G GVFRCRPN RA +VRF++ G SS L+PTH G VP+FL RKEREL++ +R K AVNGRF V G G D R ++ S S GR ++ + + + YG G +LSSVRLEDSMDGEGL+PDAGEQAFFDAWKPTGY+IDLSRYD
Sbjct: 8 NGFSSFKGDSDNKHGADKILTAGPSTWQSAQTNLVHELRCLVHARDMALAEQRARHVKESILVREQQRTLATDDPVFIGKTAKLLRAADDVAGGPAINSPLSVSPVTSRPASPILTAANQNAVDHSLEDSTCCAKRGDGLSSERDTMADTSKPPDTDDLTDSNNGNGTTLAFTGCRGGTANDNNWESRKGSPPSPSIIAAKSNEESTARTCSRCVKLQHELVTALTDRTLVEAELVSLRRASSWVDTGWEGESAGGAVDRKELGDLHTG-------GPGGTVRVVDDAENNAPRSP-----C--EELGNNDQGLDLHVEIERL----------------------ESLVSRADQGAPLSDLDAIAVDSEGLQMQELSRRRLLRLGAEADLRAARAKLDMLLPTATMPAPTPDMAKGDTERQGAGVTP---LQQNGSIH-----RDVIQEETGSGAGQHCDTKQTSKKGGEFPPTNAVPPKGG---------QGSSAIGRGRRGRGRSSGGLQSERGAVSNREKLSGRVQGVAGPPKQALGSRTADEGTTTTRKATPRTQIEDGRHPSQKDAGPKARL--TKGSGKKTGGPTNDRQKIVVVEKEGQEKLRNSPPQPDTSRPHERDDPN-KVTVNDNAKRLSVSLVEGQLQGEGEASKSSLTKDGNQAPGGDETTIREAESSLTGGNGCAKADPTVGIVANASEPPPPTVPTEVKNDVGDGKRGAMTPTKHGRAKGTTKQDRGKAARSSPSK---LTKGAVVRKPPNRLT------GEKAKTKSASTAESAAPTRSLTATEEQQFSRETATEDATGSSLPTSAPVDPGVTVEEMEDVQKQE-------GRAEKHGDSLCGTQEELTCLDTTHKTAGD-EGVEQDVRARGPIVNEEGVDIPATGASARRESISQEKRKLAGPADGGEAGDNLVTEDGDGTIEGYCGGGAVVVSEDADPGRTVGGADLHLRGVVDLAEVLRVEVDKLRLEKAELEDTIAQLNVAAAQLYLVEYEQMKAKCRQLKRVVFGPASRPANAESAYGHSCQEVMHRLKVIGVKFFRRRIGGVMGEKFFPDGLARALTLIGRPRMTQGSQTAPVDRLGPLSRNGGSPGLPRSRDVHVQVAGGIDVEDEPLMEQQVYGLLGKLDLLLKRREDVLWAYHREAEEGAREARALLASAAAQHHPGQAWGVSRPPNVRQLIGGREGPAGAPRPAINPTNLLFTAAVVLDSVAAAAAGPTPEPTVSSAPTPEKIPSASGGSESRRQRYSPAEKALLELADEVVAALDVEQRRSDASAERRRLAVDRHNNSGDSR--------FQALGRPPLGVPPLIWAMEIHLVGKLARAFRTAVEARGFEREVEDANLVAAVTLGRSSPPSSNGGKNDSGPPWHLEHRMLSVLRGD-EEEERERLQRARREFENTESCTMAANNQREQQRFGWGADTYSPRRI-YRPMTGNVGTDEGQPKYGSSPTTSPRRKEGLARGQQSRPDSTKGRTGVRDGRHASTFNRPGTMARGSTFESKAKQQCSSSRT-VDGNTRDLQNQDQREQQR----QDSAAVARVEAAVFDTVRPSRLHPRPGSASFEGRSGRVG---FYEGCSTLAATERLRPQSARLPEAHDKFLGEGGRTTVGGHTGASHAMPSDAHRSGRRAFEGNSTSGPNGEERPVRTTMTTVALTANTTARRPASAGGRVVDTRTWSSNSNVVEAGTGVFRCRPNKTTRA-AVRFEASATEGGVSSSQLVPTHPGAVPQFLLRKERELLEAHRHKQAAVNGRFEVVPDQGDDIGGCGDEGVSGYAAGGSGGDIKSDRRVMNASEISDRW------GREIGDTLEQGGDGGSGAYG-----GRVLLSSVRLEDSMDGEGLMPDAGEQAFFDAWKPTGYDIDLSRYD 1805
BLAST of mRNA_P-fluviatile_contig1.308.1 vs. uniprot
Match: A0A6H5L495_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L495_9PHAE) HSP 1 Score: 853 bits (2204), Expect = 1.420e-273 Identity = 760/1939 (39.20%), Postives = 978/1939 (50.44%), Query Frame = 1
Query: 19 NVFDSFVGDGNVDGGKEKIITVGPSAWESSQKYLVDELRRLLRARDIALAEQRARHVKESVVFREQRHALAVNEPDFSEKIAKLFGWTD--AGGPSKLS-LSVSPLTPSSSLPIGSPAT----------SMRGVWQDDRVVP----LAGVMKDIEMVSSTETSPRLEQSGLPVVFRN-SDGRSEEPKSGSSTHADPGKSRIADPTGDEEWAIAACPRCTQLRHELEVVLTDRTLAEAELVSLRRAVSLADTRWESESARVGAFRYATNEKHPDQHKDKHEGAGETTLSSPREPEESNFCLQEELG----------QIERQASLQESA------ATIFCVCLYS------------YRRNLWLP-----------QELFLQPESELKSKDST-GLSASLSATIGSRARYFEDLARRRILRLGLEADLRAARAKLNDLLASAGAKQNMPEHAEG--------GDDRSACGKEG--QDGTRRNSTWHNCKSGRATRKETQNEVAGRDTRQPPNHDLVGSAGSARVLL-ETAKDSEAQARPTRARGGSFQQPQHCQGRNQGNIALLAGAHAMPSKSERG----SCAQQDKTAKPGSRQVKLEKGSRPTLENSETVTKLPSTQGHGNARGYASAKPGKGTTTNAPQKGLGRARSPRNSPGRPHS---LSLPAAQLRKNPSSPRGGLRSGRSATSHSEKPNEAVKERNGSSAAADDESQLTRKTISNVG------LDDIVNCRQQSLEPSAPAAVDELVTE----KTKSSLQAAGAEAAGTKKRVVGSASKDDARREKMRAKGGQVAPDPNATISSSRPHGKPAKAKPVLRERKPMPMRLGGRARAKQASAENSIEDA-GDTVHESVRIGPCVAVGEVEELFVDTSLTWSGVGKAAEEGGDEE-GETERTKWFD--------RGVETAAAWEGSNPQENIAFDVHDEAAVKFVHDSEAVRSDGRRKDGGEDADVMQGKRGRGGADAASGPVAIRHHVDNDCLIPPG------------IMDLTEALGIEVDKLRLEKAELEDTVAQLNVAAAQLYFAEYEEMKAKCRQLKRVVSGPSSTPTCKESAFGQSCQEILHQVKKIGVNFFRRRVGGAMGANFFPDGLARTLSLIGRERVSQACQTAPIERLKPLLFAGASPPLPGTKDVHVQVAGGIDAEDEPLMEQQVYSLLGKLDLLLKQREDVLRHYHQEAEEGAREARALLALAAAQHRPGQAWGVSHPPNIRRLIAGREGPAGAPRPAINPTNILFTAAVVLDSAAAAAAGDTPQPFHVT--TSEAAAKGGCGDGNRRQRFSLAERALMELANEIVAALEVEQRRSDAAAERRRFCVERHSSVSDGADKHGEGGGTQMLGRPAVGVPPLIWAMDIHLVGKLARAFQTAVEARGFEREVEDANLVAAVSLGRSPTSVAEGGKCEGGPPWHLAHRALSVVRAEGDEEEKKRRERARVDFEREKG-RVAQKQEQQRSFDWGIDPYSPRGMPHRSKGGPDGTVAFRAH--SSGTSSPTRTDGLARAEQPRRQPTKGR-GYAGGSH-----------EGSTLEPRSAQQRNDRGTGVAGARRNPQVQQXXXXXXXXXGKDTGAAARVEAAVFNTVRPSRLHVRPGSASVESRSGRVASERYYSAPAASPDRVRPRPHSARLAEPGDNFTTDDRRWIAREHTAATCDGTPPE---SRERRVDGR------GGKQPVRPIVNSFA--------GPDNAGGRVIDTRIWSSTKNATARGAGVFRCRPNNIVRATSVRFDSDGVPDGTSSPPLIPTHSGEVPEFLRRKERELVKFNREKWEAVNGRFTVGSHGADET----------HRIRFVSESNSSQERIEYRSSGRSTNESYGEKREAATT-----NYGCGAGRGDRVLSSVRLEDSMDGEGLLPDAGEQAFFDAWKPTGYEIDLSRYD 5364
N F S GDG G +KI+TVG S W+S+Q LV ELR L+RARD+ALAEQRAR+VKES++ REQ+ LA N+P K AKL D AG P+ S SVSP+T + PI + A S + D ++ +AG K + + T ++ +G + F DG + S + P S IA +EE + C RC +L+H+L++ LTDRTL EAELVSLRRA S DT W+ +SA R D +G T+ E E++ EELG +IER SL A + + + + S R N+ L QE L + + S+ GL+ASLSATI RAR FE+L+RRR+LRLG EADLRAAR KL+ LL +A P+ A G G +R G QDG+ H G ++ET AG+D VG + + + S A R R RG S Q +G L AH S++ + + T + + + +E G P+ +++ +L T+G G G + K + R P+ RPH S A PSS L G+ + K+ G+ A DE+ + S G D V + EP V E ++ K+ + + A GT K+ G A++ + KG V PN G+ AK K P R +Q S + + EDA G + S + P +AV E+E+L T E+ GD G E + + D GVE A G E+ A+ + S+ R D GE D + + G G + G A+ + D PG + DL E L IEVDKLRLEKAELEDT+AQLNVAAAQLY EYE+MKAKCRQLKRV+ GP+S P ESA+G SCQE++H++K IGV FFRRR+GG MG FFPDGLAR L+LIGR R++Q QTAP++RL PL G SP LP ++DVHVQVAGGID EDEPLMEQQ ++ E + L L+ Q + G+ N+ + GR AINPT++LFTAAVVLDS A A+G TP+P + T E G +RRQR+S AE+AL++LA+E+VAAL+VEQRRSDA+AERRRF +RH++ D TQ LGRP +GVPPLIWAM+IHLVGKLARAF+TAVEARGFEREVEDANLVAAV+LGRS ++GGK + GPPWHL HR LSV+R + DEE K+RR+RA+ +FE ++ + Q +Q+ F WG D YSPR HR G G + + SS T+SP R +GLAR EQ R TKGR G G H GST E R+ QQ + T V G R Q Q+ +D+ A ARVEAAVF+TVRPSRLH RPGSAS E RSGRV +Y +A R RP SARL E D F + R HT A+ TP + S R +G G ++PVR + + A P +AGGRV+DTR WSS N G GVFRCRPN RA +VRF + G S L+PTH G VP FL RKEREL++ +R+K AVNGRF V AD+ H +R S R S ++ +G RE T + G GA G +LSSVRL+DSMDGEGLLPDAGEQAFFDAWKPTGY+IDLSRYD
Sbjct: 8 NGFSSVEGDGENKHGTDKILTVGLSTWQSAQTNLVHELRCLVRARDMALAEQRARNVKESILVREQQRTLATNDPVLIGKTAKLLRAADDVAGEPAINSPRSVSPVTSRPASPILTAANENTVNHSLEDSTCCAQRSDELLSERDTMAGTCKPPDTDNLTGSN---NGNGTTLAFTGCGDGTGNDNNWASRKGSPPSPSTIA-AKSNEESTVRTCSRCIKLQHDLDMALTDRTLVEAELVSLRRASSRVDTGWDGDSAGCAVDRKELG--------DLLKGGPGVTVRVVNEAEDNAPSPCEELGNDGRGLDIHVEIERLESLMSLADQGAPLSDLDAIAVDSEGLQMQVWRVLKLRSNMLLSAAPPKTLVLARQEFVLHSDEDEDSRSKPPGLAASLSATIARRARQFEELSRRRLLRLGAEADLRAARVKLDMLLPTATMPSPTPDMANGDIKGGLDSGTERQGAGVTPLQQDGS-----IH----GDVIQEET-GSGAGQDGDTKQTSIKVGEFSPTNAVPPKGGQGSSAIGRGRRGRGQSSXXXQSGRGAVTDREKLSDRAHGASGSSKQALGSRTAYEGTTTTRKATPRTHVEDGRHPSPKDAGPKARL--TKGSGRKTGGPTNDRQKTVVIEKESQEKLRNSPPQPDTNRPHERDDASNVNATDNAKPSS--ASLVEGQLLEEGETSKSSLTKD--GNQAPGGDETTIREAESSLTGGKGCAKADPTVKIVANASEPPPLTVVAEAKSDIGDGKSGAIMPMKHGRAKGTTKQERGKAARSSPSK---LTKGTIVRKPPNRLT------GERAKTKYASTAESATPTRSLTATEGQQLSTKTATEDATGSPLPTSDPVDPSIAVEEMEDLQKQAGGT--------EKHGDSLCGTQEESNYLDTTHKAAGDEGVEQAPRARGPIVNEDGVGMPATAASSRRESISQEQRKLAGSADEGEAGDNLVTEDGDGTIEGNCGGAAVVVSEEAD----PGRTVGGADLHFRSVADLAEVLRIEVDKLRLEKAELEDTIAQLNVAAAQLYLVEYEQMKAKCRQLKRVIFGPASRPANAESAYGHSCQEVVHRLKVIGVKFFRRRIGGVMGEKFFPDGLARALTLIGRPRMTQGSQTAPVDRLGPLSRKGDSPDLPRSRDVHVQVAGGIDVEDEPLMEQQ-----------------------RKEPERPEPSLLQLQLSTTQAKLGECLARRMSDNLS--VDGR---------AINPTDLLFTAAVVLDSVTAGASGPTPEPTVASAPTPEKNPSANGGSESRRQRYSPAEKALLKLADEVVAALDVEQRRSDASAERRRFVADRHNNFGDSR--------TQALGRPPLGVPPLIWAMEIHLVGKLARAFRTAVEARGFEREVEDANLVAAVTLGRSSPPSSKGGKNDSGPPWHLEHRMLSVLRGDEDEE-KERRQRAQREFENDESCTMVNNQREQQRFGWGADTYSPR-RNHRPNTGNGGMDEGQPNYGSSPTTSPRRKEGLARGEQSRPDSTKGRNGVRDGRHASTFNRPGTMARGSTFESRARQQYSSSRT-VDGNARCLQNQEQREQQR----QDSAAVARVEAAVFDTVRPSRLHPRPGSASFEGRSGRVG---FYEGCSALAATERLRPQSARLPEAHDKFLGERGRTTVGGHTGASH-ATPSDAHCSARRAFEGNSTSGPNGEERPVRTTMTTVALTANTTARRPCSAGGRVVDTRTWSSNSNVVEAGTGVFRCRPNKTTRA-AVRFGASATEGGVPSSQLVPTHPGAVPRFLLRKERELLESHRQKQAAVNGRFEVVPDQADDIGGCGDEGVSGHAVRGWGGDIESDRRD---MSASEISDRWG--REVGDTLEQGGDGGSGAYGGRVLLSSVRLDDSMDGEGLLPDAGEQAFFDAWKPTGYDIDLSRYD 1838 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.308.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig1.308.1 >prot_P-fluviatile_contig1.308.1 ID=prot_P-fluviatile_contig1.308.1|Name=mRNA_P-fluviatile_contig1.308.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1789bp MGEATANVFDSFVGDGNVDGGKEKIITVGPSAWESSQKYLVDELRRLLRAback to top mRNA from alignment at P-fluviatile_contig1:3806564..3814262+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig1.308.1 ID=mRNA_P-fluviatile_contig1.308.1|Name=mRNA_P-fluviatile_contig1.308.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=7699bp|location=Sequence derived from alignment at P-fluviatile_contig1:3806564..3814262+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig1:3806564..3814262+ >mRNA_P-fluviatile_contig1.308.1 ID=mRNA_P-fluviatile_contig1.308.1|Name=mRNA_P-fluviatile_contig1.308.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=10734bp|location=Sequence derived from alignment at P-fluviatile_contig1:3806564..3814262+ (Porterinema fluviatile SAG_2381)back to top |