mRNA_P-fluviatile_contig1.305.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig1.305.1
Unique NamemRNA_P-fluviatile_contig1.305.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig1.305.1 vs. uniprot
Match: A0A6H5K6E3_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6E3_9PHAE)

HSP 1 Score: 609 bits (1570), Expect = 1.880e-200
Identity = 307/326 (94.17%), Postives = 315/326 (96.63%), Query Frame = -1 
Query:   21 RLEVVDQGEQSDLDVVGIQETWELKDGDVVSKLGKYRWVGKARKGLDPKKRGEGGVGFLVKEHLFDVVEVVVKTEYEESLWLKIPGERGEKDLFLGNVYVPPSSKKVASKAQENFGQIGEDVQRFSRTGEVVMVSDFNSRVGKASSRGQAIGQHREDKVNDNGVRMLEFLGSNELMVLNSRRECDKPEFTRQRAISNEYSILDYILVDRGSTQIPELHVSAIDIGSTDHFLIWANIDRSGKMESKKQRKVFRWKVERLGHERSRDEFQKGLAGSVEPFRKLLRSVEDGQVDVQAAGDRVIEGWESIVNATAERVVGKKVVRCGVRI 998
            RLE+VDQ EQSDLDVVGIQETWELKDGDVVSKLGKYRWVGKARKGLDPKKRGEGGVGFLVKEHLFDVVEVVVKTE+EESLWLKIPGERGEKDLFLGNVYVPPSSKKVASKAQENFGQIGEDVQRFSR GEVVMV DFNSRVGKASSRGQAIGQH EDKVNDNGVRMLEFLGSNELMVLN RRECDKPEFTRQRA+ NEYSILDYILVDRGSTQIPELHVSAIDIGSTDHFLIWANIDRS K++SKKQRKVFRWKVERLG + +RDEFQKGLAGSVE FRKLLRSVEDGQVDVQAAGDRVIEGWESIVNATAERVVGKKVVRCGV +
Sbjct:  166 RLEIVDQVEQSDLDVVGIQETWELKDGDVVSKLGKYRWVGKARKGLDPKKRGEGGVGFLVKEHLFDVVEVVVKTEFEESLWLKIPGERGEKDLFLGNVYVPPSSKKVASKAQENFGQIGEDVQRFSRKGEVVMVGDFNSRVGKASSRGQAIGQHGEDKVNDNGVRMLEFLGSNELMVLNGRRECDKPEFTRQRAVCNEYSILDYILVDRGSTQIPELHVSAIDIGSTDHFLIWANIDRSRKIKSKKQRKVFRWKVERLGDDGTRDEFQKGLAGSVESFRKLLRSVEDGQVDVQAAGDRVIEGWESIVNATAERVVGKKVVRCGVSV 491
[Close]
BLAST of mRNA_P-fluviatile_contig1.305.1 vs. uniprot
Match: A0A6H5KCQ8_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCQ8_9PHAE)

HSP 1 Score: 606 bits (1562), Expect = 1.060e-197
Identity = 304/326 (93.25%), Postives = 314/326 (96.32%), Query Frame = -1 
Query:   21 RLEVVDQGEQSDLDVVGIQETWELKDGDVVSKLGKYRWVGKARKGLDPKKRGEGGVGFLVKEHLFDVVEVVVKTEYEESLWLKIPGERGEKDLFLGNVYVPPSSKKVASKAQENFGQIGEDVQRFSRTGEVVMVSDFNSRVGKASSRGQAIGQHREDKVNDNGVRMLEFLGSNELMVLNSRRECDKPEFTRQRAISNEYSILDYILVDRGSTQIPELHVSAIDIGSTDHFLIWANIDRSGKMESKKQRKVFRWKVERLGHERSRDEFQKGLAGSVEPFRKLLRSVEDGQVDVQAAGDRVIEGWESIVNATAERVVGKKVVRCGVRI 998
            RLE+VDQ EQSDLDVVGIQETWELKDGDVVSKLGKYRWVGKARKGLDPKKRGEGGVGFLVKEHLFDVVEVVVKTE+EESLWLKIPGERGEKDLFLGNVYVPPSSKKVASKAQENFGQIGEDVQRFSR GEVVMV DFNSRVGKASSRGQAIGQH EDKVNDNGVRMLEFLGSNELMVLN RRECDKPEFTRQRA+ NEYSILDYILVDRGSTQIPELH+SAIDIGSTDHFLIWANIDRS K++SKKQRKVFRWKVERLG + +RDEFQKGLAGSVE FRKLLRSVEDGQVDVQ AGDRVIEGWESIVNATAERVVG+KVVRCGV +
Sbjct:  166 RLEIVDQVEQSDLDVVGIQETWELKDGDVVSKLGKYRWVGKARKGLDPKKRGEGGVGFLVKEHLFDVVEVVVKTEFEESLWLKIPGERGEKDLFLGNVYVPPSSKKVASKAQENFGQIGEDVQRFSRKGEVVMVGDFNSRVGKASSRGQAIGQHGEDKVNDNGVRMLEFLGSNELMVLNGRRECDKPEFTRQRAVCNEYSILDYILVDRGSTQIPELHISAIDIGSTDHFLIWANIDRSRKIKSKKQRKVFRWKVERLGDDGTRDEFQKGLAGSVESFRKLLRSVEDGQVDVQTAGDRVIEGWESIVNATAERVVGRKVVRCGVSV 491
[Close]
BLAST of mRNA_P-fluviatile_contig1.305.1 vs. uniprot
Match: A0A6H5KN52_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN52_9PHAE)

HSP 1 Score: 608 bits (1567), Expect = 2.160e-197
Identity = 306/326 (93.87%), Postives = 314/326 (96.32%), Query Frame = -1 
Query:   21 RLEVVDQGEQSDLDVVGIQETWELKDGDVVSKLGKYRWVGKARKGLDPKKRGEGGVGFLVKEHLFDVVEVVVKTEYEESLWLKIPGERGEKDLFLGNVYVPPSSKKVASKAQENFGQIGEDVQRFSRTGEVVMVSDFNSRVGKASSRGQAIGQHREDKVNDNGVRMLEFLGSNELMVLNSRRECDKPEFTRQRAISNEYSILDYILVDRGSTQIPELHVSAIDIGSTDHFLIWANIDRSGKMESKKQRKVFRWKVERLGHERSRDEFQKGLAGSVEPFRKLLRSVEDGQVDVQAAGDRVIEGWESIVNATAERVVGKKVVRCGVRI 998
            RLE+VDQ EQSDLDVVGIQETWELKDGDVVSKLGKYRWVGKARKGLDPKKRGEGGVGFLVKEHLFDVVEVVVKTE+EESLWLKIPGERGEKDLFLGNVYVPPSSKKVASKAQENFGQIGEDVQRFSR GEVVMV DFNSRVGKASSRGQAIGQH EDKVNDNGVRMLEFLGSNELMVLN RRECDKPEFTRQRA+ NEYSILDYILVDRGSTQIPELH+SAIDIGSTDHFLIWANIDRS KM+SKKQRKVFRWKVERLG + +RDEFQKGLAGSVE FRKLLRSVEDGQVDVQAAGDRVIEGWESIVNATAERVVG KVVRCGV +
Sbjct:  166 RLEIVDQVEQSDLDVVGIQETWELKDGDVVSKLGKYRWVGKARKGLDPKKRGEGGVGFLVKEHLFDVVEVVVKTEFEESLWLKIPGERGEKDLFLGNVYVPPSSKKVASKAQENFGQIGEDVQRFSRKGEVVMVGDFNSRVGKASSRGQAIGQHGEDKVNDNGVRMLEFLGSNELMVLNGRRECDKPEFTRQRAVCNEYSILDYILVDRGSTQIPELHISAIDIGSTDHFLIWANIDRSRKMKSKKQRKVFRWKVERLGDDGTRDEFQKGLAGSVESFRKLLRSVEDGQVDVQAAGDRVIEGWESIVNATAERVVGTKVVRCGVSV 491
[Close]
BLAST of mRNA_P-fluviatile_contig1.305.1 vs. uniprot
Match: A0A6H5KT17_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT17_9PHAE)

HSP 1 Score: 607 bits (1564), Expect = 1.740e-194
Identity = 306/326 (93.87%), Postives = 314/326 (96.32%), Query Frame = -1 
Query:   21 RLEVVDQGEQSDLDVVGIQETWELKDGDVVSKLGKYRWVGKARKGLDPKKRGEGGVGFLVKEHLFDVVEVVVKTEYEESLWLKIPGERGEKDLFLGNVYVPPSSKKVASKAQENFGQIGEDVQRFSRTGEVVMVSDFNSRVGKASSRGQAIGQHREDKVNDNGVRMLEFLGSNELMVLNSRRECDKPEFTRQRAISNEYSILDYILVDRGSTQIPELHVSAIDIGSTDHFLIWANIDRSGKMESKKQRKVFRWKVERLGHERSRDEFQKGLAGSVEPFRKLLRSVEDGQVDVQAAGDRVIEGWESIVNATAERVVGKKVVRCGVRI 998
            RLE+VDQ EQSDLDVVGIQETWELKDGDVVSKLGKYRWVGKARKGLDPKKRGEGGVGFLVKEHLFDVVEVVVKTE+EESLWLKIPGERGEKDLFLGNVYVPPSSKKVASKAQENFGQIGEDVQRFSR GEVVMV DFNSRVGKASSRGQAIGQH EDKVNDNGVRMLEFLGSNELMVLN RRECDKPEFTRQRA+ NEYSILDYILVDRGSTQIPELHVSAIDIGSTDHFLIWANIDRS K++SKKQRKVFRWKVERLG + +RDEFQKGLAGSVE FRKLLRSVEDGQVDVQAAGDRVIEGWESIVNATAERVVG KVVRCGV +
Sbjct:  166 RLEIVDQVEQSDLDVVGIQETWELKDGDVVSKLGKYRWVGKARKGLDPKKRGEGGVGFLVKEHLFDVVEVVVKTEFEESLWLKIPGERGEKDLFLGNVYVPPSSKKVASKAQENFGQIGEDVQRFSRKGEVVMVGDFNSRVGKASSRGQAIGQHGEDKVNDNGVRMLEFLGSNELMVLNGRRECDKPEFTRQRAVCNEYSILDYILVDRGSTQIPELHVSAIDIGSTDHFLIWANIDRSRKIKSKKQRKVFRWKVERLGDDGTRDEFQKGLAGSVESFRKLLRSVEDGQVDVQAAGDRVIEGWESIVNATAERVVGTKVVRCGVSV 491
[Close]
BLAST of mRNA_P-fluviatile_contig1.305.1 vs. uniprot
Match: A0A6H5K6P2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6P2_9PHAE)

HSP 1 Score: 606 bits (1563), Expect = 4.700e-193
Identity = 305/326 (93.56%), Postives = 314/326 (96.32%), Query Frame = -1 
Query:   21 RLEVVDQGEQSDLDVVGIQETWELKDGDVVSKLGKYRWVGKARKGLDPKKRGEGGVGFLVKEHLFDVVEVVVKTEYEESLWLKIPGERGEKDLFLGNVYVPPSSKKVASKAQENFGQIGEDVQRFSRTGEVVMVSDFNSRVGKASSRGQAIGQHREDKVNDNGVRMLEFLGSNELMVLNSRRECDKPEFTRQRAISNEYSILDYILVDRGSTQIPELHVSAIDIGSTDHFLIWANIDRSGKMESKKQRKVFRWKVERLGHERSRDEFQKGLAGSVEPFRKLLRSVEDGQVDVQAAGDRVIEGWESIVNATAERVVGKKVVRCGVRI 998
            RLE+VDQ EQSDLDVVGIQETWELKDGDVVSKLGKYRWVGKARKGLDPKKRGEGGVGFLVKEHLFDVVEVVVKTE+EESLWLKIPGERGEKDLFLGNVYVPPSSKKVASKAQENFGQIGEDVQRFSR GEVVMV DFNSRVGKASSRGQAIGQH EDKVNDNGVRMLEFLGSNELMVLN RRECDKPEFTRQRA+ NEYSILDYILVDRGSTQIPELHVSAIDIGSTDHFLIWANIDRS K++SKKQRKVFRWKVERLG + +RDEFQKGLAGSVE FRKLLRSVEDGQVDVQ AGDRVIEGWESIVNATAERVVG+KVVRCGV +
Sbjct:  246 RLEIVDQVEQSDLDVVGIQETWELKDGDVVSKLGKYRWVGKARKGLDPKKRGEGGVGFLVKEHLFDVVEVVVKTEFEESLWLKIPGERGEKDLFLGNVYVPPSSKKVASKAQENFGQIGEDVQRFSRKGEVVMVGDFNSRVGKASSRGQAIGQHGEDKVNDNGVRMLEFLGSNELMVLNGRRECDKPEFTRQRAVCNEYSILDYILVDRGSTQIPELHVSAIDIGSTDHFLIWANIDRSRKIKSKKQRKVFRWKVERLGDDGTRDEFQKGLAGSVESFRKLLRSVEDGQVDVQTAGDRVIEGWESIVNATAERVVGRKVVRCGVSV 571
[Close]
BLAST of mRNA_P-fluviatile_contig1.305.1 vs. uniprot
Match: A0A6H5L5C9_9PHAE (Reverse transcriptase domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5C9_9PHAE)

HSP 1 Score: 609 bits (1570), Expect = 2.020e-189
Identity = 307/326 (94.17%), Postives = 315/326 (96.63%), Query Frame = -1 
Query:   21 RLEVVDQGEQSDLDVVGIQETWELKDGDVVSKLGKYRWVGKARKGLDPKKRGEGGVGFLVKEHLFDVVEVVVKTEYEESLWLKIPGERGEKDLFLGNVYVPPSSKKVASKAQENFGQIGEDVQRFSRTGEVVMVSDFNSRVGKASSRGQAIGQHREDKVNDNGVRMLEFLGSNELMVLNSRRECDKPEFTRQRAISNEYSILDYILVDRGSTQIPELHVSAIDIGSTDHFLIWANIDRSGKMESKKQRKVFRWKVERLGHERSRDEFQKGLAGSVEPFRKLLRSVEDGQVDVQAAGDRVIEGWESIVNATAERVVGKKVVRCGVRI 998
            RLE+VDQ EQSDLDVVGIQETWELKDGDVVSKLGKYRWVGKARKGLDPKKRGEGGVGFLVKEHLFDVVEVVVKTE+EESLWLKIPGERGEKDLFLGNVYVPPSSKKVASKAQENFGQIGEDVQRFSR GEVVMV DFNSRVGKASSRGQAIGQH EDKVNDNGVRMLEFLGSNELMVLN RRECDKPEFTRQRA+ NEYSILDYILVDRGSTQIPELHVSAIDIGSTDHFLIWANIDRS K++SKKQRKVFRWKVERLG + +RDEFQKGLAGSVE FRKLLRSVEDGQVDVQAAGDRVIEGWESIVNATAERVVGKKVVRCGV +
Sbjct:  409 RLEIVDQVEQSDLDVVGIQETWELKDGDVVSKLGKYRWVGKARKGLDPKKRGEGGVGFLVKEHLFDVVEVVVKTEFEESLWLKIPGERGEKDLFLGNVYVPPSSKKVASKAQENFGQIGEDVQRFSRKGEVVMVGDFNSRVGKASSRGQAIGQHGEDKVNDNGVRMLEFLGSNELMVLNGRRECDKPEFTRQRAVCNEYSILDYILVDRGSTQIPELHVSAIDIGSTDHFLIWANIDRSRKIKSKKQRKVFRWKVERLGDDGTRDEFQKGLAGSVESFRKLLRSVEDGQVDVQAAGDRVIEGWESIVNATAERVVGKKVVRCGVSV 734
[Close]
BLAST of mRNA_P-fluviatile_contig1.305.1 vs. uniprot
Match: A0A6H5JUS9_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUS9_9PHAE)

HSP 1 Score: 569 bits (1467), Expect = 4.090e-179
Identity = 287/326 (88.04%), Postives = 303/326 (92.94%), Query Frame = -1 
Query:   21 RLEVVDQGEQSDLDVVGIQETWELKDGDVVSKLGKYRWVGKARKGLDPKKRGEGGVGFLVKEHLFDVVEVVVKTEYEESLWLKIPGERGEKDLFLGNVYVPPSSKKVASKAQENFGQIGEDVQRFSRTGEVVMVSDFNSRVGKASSRGQAIGQHREDKVNDNGVRMLEFLGSNELMVLNSRRECDKPEFTRQRAISNEYSILDYILVDRGSTQIPELHVSAIDIGSTDHFLIWANIDRSGKMESKKQRKVFRWKVERLGHERSRDEFQKGLAGSVEPFRKLLRSVEDGQVDVQAAGDRVIEGWESIVNATAERVVGKKVVRCGVRI 998
            RLE+VDQ EQS+LDVVGIQE WELK+GDVVSKLGKYRWVGKARKGLDPKKRGEGGVGFLVKEHL DVVEV VKTE+EESLWLKIPGERGEKDLFLG+V VPPSSKKVA+KAQENF Q GEDVQRFSR GEVVMV DFNSRVGKASSRGQAIGQH EDKVNDNGVRMLEFL SN+LMVLN RR+CDKPEF RQRA+ NEYSI+DYILVDRGSTQIPELHVSAI+ GSTDHFL+WANIDRS KME KK  KVFRWKVERLG E +RDEFQKGLAGSVEPFRKLLRSVEDGQVDVQA+GDR IEGWESIVNATAERVVG+KVVRCGV +
Sbjct:   24 RLEIVDQVEQSELDVVGIQERWELKNGDVVSKLGKYRWVGKARKGLDPKKRGEGGVGFLVKEHLVDVVEVEVKTEFEESLWLKIPGERGEKDLFLGDVCVPPSSKKVATKAQENFRQSGEDVQRFSRKGEVVMVGDFNSRVGKASSRGQAIGQHGEDKVNDNGVRMLEFLESNQLMVLNGRRKCDKPEFPRQRAVCNEYSIIDYILVDRGSTQIPELHVSAIEKGSTDHFLVWANIDRSRKMEGKKHTKVFRWKVERLGDEGTRDEFQKGLAGSVEPFRKLLRSVEDGQVDVQASGDRGIEGWESIVNATAERVVGRKVVRCGVSV 349
[Close]
BLAST of mRNA_P-fluviatile_contig1.305.1 vs. uniprot
Match: A0A6H5KVW2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVW2_9PHAE)

HSP 1 Score: 519 bits (1337), Expect = 3.930e-170
Identity = 261/300 (87.00%), Postives = 277/300 (92.33%), Query Frame = -1 
Query:   21 GDVVSKLGKYRWVGKARKGLDPKKRGEGGVGFLVKEHLFDVVEVVVKTEYEESLWLKIPGERGEKDLFLGNVYVPPSSKKVASKAQENFGQIGEDVQRFSRTGEVVMVSDFNSRVGKASSRGQAIGQHREDKVNDNGVRMLEFLGSNELMVLNSRRECDKPEFTRQRAISNEYSILDYILVDRGSTQIPELHVSAIDIGSTDHFLIWANIDRSGKMESKKQRKVFRWKVERLGHERSRDEFQKGLAGSVEPFRKLLRSVEDGQVDVQAAGDRVIEGWESIVNATAERVVGKKVVRCGVRI 920
            GDVVSKLGKY+WVGKARKGLDPK+ GEGG GFLVKEHL  VVEVVVKTE+EESLWLKIPG RGEKD F+GNVYVPPSSKKVASKAQENFGQIGEDVQRFSR GEVVMV DFNSRVGKASSRGQAIGQH EDKVNDNGVRMLEFLGSNELM L  RRECDKPEFT QRA+ NEYSILDYIL+DRGS QIPELHVS IDIGSTDHFLIWANIDRS KM+SKKQRKVF+WK+ERLG E +RD+FQKGLAGSVEPFRKLLRSVEDGQVDVQAAGDRV +GWESI+N TAE V+GK+VVRCGV +
Sbjct:   39 GDVVSKLGKYQWVGKARKGLDPKEGGEGG-GFLVKEHLLGVVEVVVKTEFEESLWLKIPGGRGEKDWFVGNVYVPPSSKKVASKAQENFGQIGEDVQRFSRKGEVVMVGDFNSRVGKASSRGQAIGQHGEDKVNDNGVRMLEFLGSNELMELKGRRECDKPEFTGQRAVCNEYSILDYILLDRGSAQIPELHVSVIDIGSTDHFLIWANIDRSRKMDSKKQRKVFQWKIERLGDEGTRDDFQKGLAGSVEPFRKLLRSVEDGQVDVQAAGDRVNKGWESILNTTAETVMGKQVVRCGVSV 337
[Close]
BLAST of mRNA_P-fluviatile_contig1.305.1 vs. uniprot
Match: A0A6H5LB09_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB09_9PHAE)

HSP 1 Score: 513 bits (1322), Expect = 5.430e-153
Identity = 267/326 (81.90%), Postives = 276/326 (84.66%), Query Frame = -1 
Query:   21 RLEVVDQGEQSDLDVVGIQETWELKDGDVVSKLGKYRWVGKARKGLDPKKRGEGGVGFLVKEHLFDVVEVVVKTEYEESLWLKIPGERGEKDLFLGNVYVPPSSKKVASKAQENFGQIGEDVQRFSRTGEVVMVSDFNSRVGKASSRGQAIGQHREDKVNDNGVRMLEFLGSNELMVLNSRRECDKPEFTRQRAISNEYSILDYILVDRGSTQIPELHVSAIDIGSTDHFLIWANIDRSGKMESKKQRKVFRWKVERLGHERSRDEFQKGLAGSVEPFRKLLRSVEDGQVDVQAAGDRVIEGWESIVNATAERVVGKKVVRCGVRI 998
            RLE+VDQ EQSDLDVVGIQETWELKDGDVVSKLGKYRWVGKARKGLDPKKRGEGGVGFLVKEHLFDVVEVVVKTE+EESLWLKIPGERGEKDLFLGNVYVPPSSKKVASKAQENFGQIGEDVQRFSR GEVVMV DFNSRVGKASSRGQAIGQH EDKVNDNGVRMLEFLGSNELMVLN RRECDKPEFTRQRA+ NEYSILDYILVDRGSTQIPELH+SAIDIGSTDHFLIWANIDRS K++SKKQRKVFRWKVERLG E +RDEFQKG A                                       ERVVGK+VVRCGV +
Sbjct:  144 RLEIVDQVEQSDLDVVGIQETWELKDGDVVSKLGKYRWVGKARKGLDPKKRGEGGVGFLVKEHLFDVVEVVVKTEFEESLWLKIPGERGEKDLFLGNVYVPPSSKKVASKAQENFGQIGEDVQRFSRKGEVVMVGDFNSRVGKASSRGQAIGQHGEDKVNDNGVRMLEFLGSNELMVLNGRRECDKPEFTRQRAVCNEYSILDYILVDRGSTQIPELHISAIDIGSTDHFLIWANIDRSRKIKSKKQRKVFRWKVERLGDEGTRDEFQKGQA---------------------------------------ERVVGKEVVRCGVSV 430
[Close]
BLAST of mRNA_P-fluviatile_contig1.305.1 vs. uniprot
Match: A0A6H5KQM1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQM1_9PHAE)

HSP 1 Score: 429 bits (1103), Expect = 6.500e-136
Identity = 229/293 (78.16%), Postives = 237/293 (80.89%), Query Frame = -1 
Query:  105 DQGEQSDLDVVGIQETWELKDGDVVSKLGKYRWVGKARKGLDPKKRGEGGVGFLVKEHLFDVVEVVVKTEYEESLWLKIPGERGEKDLFLGNVYVPPSSKKVASKAQENFGQIGEDVQRFSRTGEVVMVSDFNSRVGKASSRGQAIGQHREDKVNDNGVRMLEFLGSNELMVLNSRRECDKPEFTRQRAISNEYSILDYILVDRGSTQIPELHVSAIDIGSTDHFLIWANIDRSGKMESKKQRKVFRWKVERLGHERSRDEFQKGLAGSVEPFRKLLRSVEDGQVDVQAAGDR 983
            D+ EQSD+D VGIQETWELKDGDV                                EHL DVVEVVVKTE EESLWLKI GERGEKDLF GNVYVPPSSK+VASKAQENFGQIGEDVQ FSR GEVV+V DFNS VGKASSRGQAIGQ+ E+KVNDNGVRMLEFLGSNELMVLN RRECDKPEFTRQRA+ NEYSILDYILVDRGSTQIP  HV AID GSTDHFL WANIDRS KMESKKQRKVF WKVERLG E +RDEFQKGL GSVEPFRKLLRSVEDGQVDVQAA DR
Sbjct:   73 DRAEQSDVDEVGIQETWELKDGDV--------------------------------EHLGDVVEVVVKTELEESLWLKIRGERGEKDLFPGNVYVPPSSKEVASKAQENFGQIGEDVQTFSRKGEVVVVGDFNSGVGKASSRGQAIGQYGEEKVNDNGVRMLEFLGSNELMVLNGRRECDKPEFTRQRAVCNEYSILDYILVDRGSTQIPAPHVCAIDRGSTDHFLTWANIDRSRKMESKKQRKVFWWKVERLGDEGTRDEFQKGLVGSVEPFRKLLRSVEDGQVDVQAAEDR 333
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.305.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K6E3_9PHAE1.880e-20094.17Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5KCQ8_9PHAE1.060e-19793.25Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KN52_9PHAE2.160e-19793.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KT17_9PHAE1.740e-19493.87Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K6P2_9PHAE4.700e-19393.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L5C9_9PHAE2.020e-18994.17Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JUS9_9PHAE4.090e-17988.04Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KVW2_9PHAE3.930e-17087.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LB09_9PHAE5.430e-15381.90Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KQM1_9PHAE6.500e-13678.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:3784057..3788945 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons3
Model size3899
Cds size531
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.305.1prot_P-fluviatile_contig1.305.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig1 3786658..3787518 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815318.64639-UTR-P-fluviatile_contig1:3784056..37857091622815318.64639-UTR-P-fluviatile_contig1:3784056..3785709Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 3784057..3785709 +
1693561488.9847498-UTR-P-fluviatile_contig1:3784056..37857091693561488.9847498-UTR-P-fluviatile_contig1:3784056..3785709Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 3784057..3785709 +
1622815318.6602263-UTR-P-fluviatile_contig1:3786369..37866571622815318.6602263-UTR-P-fluviatile_contig1:3786369..3786657Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 3786370..3786657 +
1693561489.0028741-UTR-P-fluviatile_contig1:3786369..37866571693561489.0028741-UTR-P-fluviatile_contig1:3786369..3786657Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 3786370..3786657 +
1622815318.6986914-UTR-P-fluviatile_contig1:3787518..37889451622815318.6986914-UTR-P-fluviatile_contig1:3787518..3788945Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 3787519..3788945 +
1693561489.0275006-UTR-P-fluviatile_contig1:3787518..37889451693561489.0275006-UTR-P-fluviatile_contig1:3787518..3788945Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 3787519..3788945 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815318.679125-CDS-P-fluviatile_contig1:3786657..37866791622815318.679125-CDS-P-fluviatile_contig1:3786657..3786679Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3786658..3786679 +
1693561489.011308-CDS-P-fluviatile_contig1:3786657..37866791693561489.011308-CDS-P-fluviatile_contig1:3786657..3786679Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3786658..3786679 +
1622815318.689124-CDS-P-fluviatile_contig1:3787009..37875181622815318.689124-CDS-P-fluviatile_contig1:3787009..3787518Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3787010..3787518 +
1693561489.0194461-CDS-P-fluviatile_contig1:3787009..37875181693561489.0194461-CDS-P-fluviatile_contig1:3787009..3787518Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3787010..3787518 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig1.305.1

>prot_P-fluviatile_contig1.305.1 ID=prot_P-fluviatile_contig1.305.1|Name=mRNA_P-fluviatile_contig1.305.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=177bp
MALHLLRGCKVVRPARTPTTVQTRAEIDKFDCEVLQFLAPRSRTQQSHHR
PVQLIDYAAFASSWNEDVAKLERDVLAGLEEKGSADDLICRKNGNHLQHY
WTESRKDVNTTRTIEPHDALMRALRQHLVVHPATREDVRESGDDRPARFG
VTFNGKISRCPSAGSPGRTGTVRLCW*
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mRNA from alignment at P-fluviatile_contig1:3784057..3788945+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig1.305.1 ID=mRNA_P-fluviatile_contig1.305.1|Name=mRNA_P-fluviatile_contig1.305.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4889bp|location=Sequence derived from alignment at P-fluviatile_contig1:3784057..3788945+ (Porterinema fluviatile SAG_2381)
CGTCATCCCACCACTTAACCGATACGTACCCCACATCGTACCACCTTTTT
TCCCACTACTCTCTCTGCCGTTGCGTTCACTATGGACTCCCACCCTTCAA
TCACCCTGTCCCCGGCTGCTTGTACGTCTACCTGCCCGTCTTCGACGCTT
CTCAGCAGTTTCCTGAAGGGTTCTACACTACCAGCCAGTCCCTTCTGGAA
TTCATCCCGTGACCTCTCGTGTCCCAAACGCTCTACTTTCCACCGGAACA
CTTTTCTCTGTTTCTTACTCTCCATCTTTCCAGATCGGTCGATGTTTGCC
CATATAAGGAAGTGGTCGGTCGAACCTATATCTATCGCACTTACGTGCAG
CTCTGGGATCTGTGTGCTCCCCCTATCTACCAGGATGTAGTCGAGGATCG
AGTATTCATTGCTAATTGCTCGTTGCCTGGTGAACTCCGGCTTATCGCAT
TCCCTCCTACTGTTCAACACCATCAGCTCGTTGCTTCCCAAGAATTCAAG
CATCCTCACTCCGTTGTCATTCACTTTGTCTTCTCGGTGCTGCCCGATCG
CCTGTCCTCTACTGGAAGCTTTCCCTACTCTGGAGTTGAAATCGCTCACC
ATGACAACTTCTCCTGTCCTACTGAACCTCTGGACATCTTCCCCAATTTG
TCCAAAGTTCTCCTGCGCCTTGCTTGCGACTTTCTTCGACGACGGTGGAA
CGTATACGTTCCCTAGAAACAAATCTTTCTCACCCCGCTCCCCAGGTATC
TTAAGCCATAGGCTTTCCTCGTACTCCGTTTTCACCACTACTTCCACCAC
GTCAAATAAGTGTTCCTTGACCAGGAATCCGACTCCCCCCTCCCCCCTTT
TCTTCGGGTCTAAGCCCTTTCTTGCCTTCCCTACCCACCGGTATTTCCCT
AGTTTGCTTACCACGTCACCATCCTTCAGTTCCCACGTCTCTTGGATCCC
CACTACATCTAGATCGCTTTGTTCTCCTTGGTCCACTACTTCCAACCGCA
GGTCAGGGGGGCGGGGGGAAATATGAAGGCGGAACATTTTAACTTCAGAA
ATTCTAAATTTTCTGCCCACATTTTGCCTACGTTTTCCATGCCTATTTCG
ACACTTTTTGACGGAGGTGGTGATTTCTACTTTATCCTTAAGCTGCACAT
CCGTTTTTATGCTTGAATTTTGTTCGGACTCACAGGCGAACACCAGACTG
CAGACGGACCTACCTCCACTTCTAGGCGTGGACGTCGCCCAGCGGGAAAT
GCCAGCAGGATCTAAGCAGGGAACACCGTCGCCCGATGTTGCTGGGGCGA
GTGGCGAGGTTACGGATAGCCCGTGCGGGCTTCTGGTCAAGCTTGATCTG
TGGCCGCCCAACACCGGTTGATTGACTTAGCCTCCAAGCAGCAGGGAGGG
TACTACCCGTTGCTCTTCCACCTGCGAGACACTCTCGCAATCTCGGACCC
ACCCCTGCTGCAGCAGGCGAAGGAAGTGTGGAAGAGGCGATATCCGACGT
GGGCGGAAGAAGAGATTTCCAAGGACATGAGGGTCAACTTGACCAACAAG
GTCCTCAAGCACGTGCCGCGCGCCGTCCCGCCGGCGAAGGTTCTCCTGGG
CCGGTTCGGCCTCCTCATCGCGGCTTTCAAGGACGTGCGGAATGCCAAGA
CAGGTACTCGAACGAACTTCTTTTTGCAGCTACCGCTTGATTGTATTGCT
CCTGTCTTCCTATCACATGAGGCTAGGAGTGCTTGTCCTTCGTGTTTTCA
AGTACCCCACGTACTTGTCGCACTCAGCTGTGTTCTGCACAGTTTTTCTT
AGCTTCTTCGCTAGATATTTTGCATCTTCGCCTCGCCTTGCTTTTTTGAT
AGGGAACTTGCTTACTCTTCACGGGCCGTCGCAACAGAGGCATAGCCAAC
TTGCGCCACCATCTTCGAGGTGGTTGCCTCAGGCACCCTCGCGAAGCGCA
ACTGTACGTCTTTTCGGGTCGCACGGTTGACGGAGTGGACGAGTACGGGT
GCGGGCGAGGAACGAAAAACACGAAAAACTACAAGTACCACAAACCTATT
CGCAATCTCCTTTCCGGCTTCGGAACCTCCCCTCGCATGGCGCATTCTGT
CCTGCTCCCCTTCAACTACAGGCGTAACCACCGCATGGCAGGCGGGTTGA
CTGCGGCTTAGTTTGTGATAATGTTTGCCGGTGTTTTTGATTGAAAAGGT
TGAGGAAGTCGCGGAAATGTTCGAAAGTTGCCGTAGACTTCGTCATTTGG
GTTCTGGCTAGGATACCACTCACATCGTCCACCTTCGATTCTGCTTTCGC
CCTATTTCACCAGTAAAGCACCGGGGTTTGGACCCAGAACTGTCAGGGTG
GTACACGCACTGGCTGCCGGACGATTTGGAGGAGGTTACAGCCGGGTGGC
ACCCAACCCGACTCTCCCCTTTTTGGGACTCAACCAAGAACTACCTCGAC
ACCGGGGAGTTTACCGGCCTCGCAACCGCACGGAATTCTGGCGAGGAGCT
GCAGATACTCTCCCTCTCGCAAGCTTGCAGCGGCACGGGCGAGCTCATGG
ATCCAGAAGTGGGCGAGAAAGACGACCGGCGGGAGACATGTGGGACTGAG
GATGGCCTTGCACCTGCTGCGAGGTCAGTTGTACAAGTTGGTTTGTCGTG
GTTGTTTCAAAGCACCAGGTTTTGATTCAGGTTTTCATTCGCTGCTCGCC
GACCTCTTGACTCTGCACGCCGAGTTTCCTGCCGCGATCTTCATTTTGAT
GTTTAAAGCGATCGCGTTTCTTCCCCTTTTTTTATGTTTGGCGTAAACGC
CAACCTCGTTTGTGATGGCTTTCAACTTTGACCTGGGTTCTTGAATGGCA
ACCTCTTTTGTGATTGGCTTTCAACTTTAACCTGAGTTCTGTCCCTTTTT
TCATGGTTAGCCCCCTCATGTGTTCCTATTGTGACGGTTGGATACTTTTC
TAGGATGCAAGGTAGTTCGCCCAGCGAGGACGCCCACTACTGTTCAGACG
CGGGCGGAAATAGATAAGTTCGACTGCGAAGTCCTTCAGTTCCTGGCACC
CCGATCACGGACGCAGCAAAGTCACCATCGGCCGGTCCAGCTGATTGACT
ATGCAGCGTTTGCGAGCAGCTGGAACGAGGACGTCGCAAAGTTGGAAAGG
GATGTCTTGGCGGGGCTGGAGGAAAAGGGGTCGGCGGACGACCTCATCTG
CCGCAAAAACGGGAACCACCTTCAGCACTACTGGACGGAGTCAAGAAAGG
ACGTGAACACCACGCGCACGATAGAGCCACACGACGCCCTCATGAGAGCG
CTGCGACAGCACCTGGTGGTGCATCCAGCCACTCGAGAAGACGTGCGAGA
GAGCGGCGACGACAGGCCAGCCAGATTCGGAGTGACCTTCAATGGGAAGA
TCAGCCGTTGCCCCAGTGCCGGCAGCCCAGGCCGGACCGGCACCGTGCGC
CTTTGCTGGTGATGCGCAAGGAGCAGGACTGGAGCAGGGGCTGAATAATC
AAGCCAACCCGGCGTTGATGGTGGGAGGGGAAGTTTGAGTGGAGAGGATG
AAGATGGAGAAGATCGTGACAAGGGTCTCATTGATGTGGGTGGTGGACCA
GCGGGTGTGTTGGCGCAAAAACGGACATGGTGTACAGCTACGTGCGGTGA
CCCTATGTTCGTCATTTCGGCTCAAGCTTGTAGCTCGTACGAGAGAGTGA
AACCCAGGTTCGGTGTAGGTGGAATACAGGCTGAGCAGCGGCGCGTGTGG
GACCCCCCTGTGCGCCAATCGCAAATCCTGGCGCTGGCGGCGGGGGGACG
ACGTGTCCACCTCGGTGCCAAGACTGTGGTCACTTCAAGCGTGCGCTGAA
ACTCGCGCATGTTGATGCGAATCGGAAAGGCCAAAAAGCAAGAGTGGAAT
TTGCCAGCGAACGAACGCAGAGGGTCCGACTTCCCGAACCGCGGGAGAAA
CCGATATGACAAAAAGCAGCCTTGCCCGTGAGCAGCACGCAAGGCATTCA
TCTCTACGTTGGCGGCGCCTGGGATGGAGGGCAGTGGGTAGCGCTGTTCG
CTTTGTTTATGTGTCGTTCTGGGTTTTACCCTTCCGTGTTTTATTGTTGG
GATGACGTTTTTTTGTTGTGACAACGTTGTAATTATCAAGTCGTTTGATG
GTGCCATGGTTCCCACAAGTTGCTTTGTGTATCGTACTGGTTGTTACCAT
TGTGTCTGCGTGATTTTTTTGTTGGGATGAAGTTTTTTTTTTTTTGTAAC
ATTGTTGTAATTATCAGGTCCTCCGATTGTGGCTTGGTTCCCGCAAAGTA
ACACATAAATTTTGGGATTTACTTGCAGCAGATTTGATGAGGAATACAGA
AATATGATGGCGACATTAACCCGCTCTGTGCCGTGCTCGCTTTATCCCTA
TCCCGGCCAGTTTGAAGGATGACATCGAGATTACCAAATATGTGCTCTTA
CAGCTTTCTGTCTTCTGCTTTCGACGCACTACTGTAGTACGGCGTTCTAT
GCCAGAGGTCACATAATCTACCTTGGGTTTTGAAGACGTATCGAGTGTTC
GCTTGCACGGCAGTCTGTTTGAATGCCACTTCTACCGGAGATTACCTAAA
ACACTACACATTCTGGGCCGATTTTCAATGCTCAACACCTGCACGGCACA
AGAGGACAGTGCATTATGGCATACCTTTCGAACGAAAGAGATATTATTCG
AACGTCAAGTTGTTCGGCGTAATCGCTTCTTGCCGTCAAGACATCGTAGG
TTGGAAAGCGGCGCATAATGGGGTGTGGTACCTTCGCATATATTATTGGA
CAAAATTCACGGTACATCAGATTGATTGGCTCTTCTGTGACAACTTCCCA
AGGTTTGGGGCAACAGAAACAGCAAAGTACAAATCAGAG
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Coding sequence (CDS) from alignment at P-fluviatile_contig1:3784057..3788945+

>mRNA_P-fluviatile_contig1.305.1 ID=mRNA_P-fluviatile_contig1.305.1|Name=mRNA_P-fluviatile_contig1.305.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1062bp|location=Sequence derived from alignment at P-fluviatile_contig1:3784057..3788945+ (Porterinema fluviatile SAG_2381)
ATGGCCTTGCACCTGCTGCGAGATGGCCTTGCACCTGCTGCGAGGATGCA
AGGTAGTTCGCCCAGCGAGGACGCCCACTACTGTTCAGACGCGGGCGGAA
ATAGATAAGTTCGACTGCGAAGTCCTTCAGTTCCTGGCACCCCGATCACG
GACGCAGCAAAGTCACCATCGGCCGGTCCAGCTGATTGACTATGCAGCGT
TTGCGAGCAGCTGGAACGAGGACGTCGCAAAGTTGGAAAGGGATGTCTTG
GCGGGGCTGGAGGAAAAGGGGTCGGCGGACGACCTCATCTGCCGCAAAAA
CGGGAACCACCTTCAGCACTACTGGACGGAGTCAAGAAAGGACGTGAACA
CCACGCGCACGATAGAGCCACACGACGCCCTCATGAGAGCGCTGCGACAG
CACCTGGTGGTGCATCCAGCCACTCGAGAAGACGTGCGAGAGAGCGGCGA
CGACAGGCCAGCCAGATTCGGAGTGACCTTCAATGGGAAGATCAGCCGTT
GCCCCAGTGCCGGCAGCCCAGGCCGGACCGGCACCGTGCGCCTTTGCTGG
TGAGATGCAAGGTAGTTCGCCCAGCGAGGACGCCCACTACTGTTCAGACG
CGGGCGGAAATAGATAAGTTCGACTGCGAAGTCCTTCAGTTCCTGGCACC
CCGATCACGGACGCAGCAAAGTCACCATCGGCCGGTCCAGCTGATTGACT
ATGCAGCGTTTGCGAGCAGCTGGAACGAGGACGTCGCAAAGTTGGAAAGG
GATGTCTTGGCGGGGCTGGAGGAAAAGGGGTCGGCGGACGACCTCATCTG
CCGCAAAAACGGGAACCACCTTCAGCACTACTGGACGGAGTCAAGAAAGG
ACGTGAACACCACGCGCACGATAGAGCCACACGACGCCCTCATGAGAGCG
CTGCGACAGCACCTGGTGGTGCATCCAGCCACTCGAGAAGACGTGCGAGA
GAGCGGCGACGACAGGCCAGCCAGATTCGGAGTGACCTTCAATGGGAAGA
TCAGCCGTTGCCCCAGTGCCGGCAGCCCAGGCCGGACCGGCACCGTGCGC
CTTTGCTGGTGA
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