mRNA_P-fluviatile_contig1.280.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig1.280.1 vs. uniprot
Match: D8LLK7_ECTSI (COG0557: Exoribonuclease R n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLK7_ECTSI) HSP 1 Score: 1189 bits (3076), Expect = 0.000e+0 Identity = 611/776 (78.74%), Postives = 671/776 (86.47%), Query Frame = 1
Query: 442 MSAVHQISPGSIVVFDTEVRGRAPVLGLVTNSNVTKKKSTYTVQAV----GGGSTATVAPRQVRYVIPGGSFYQASDLAAFEQQQEFDEGLMEEVWDMMLQEGAAAATGGLDGGVGAAAGSDAT---------SDDPRGMAELLFGVGDPTPQQCYQAFRLLEGRDGTLYFKRRRDGTYECRTRDAVKVARLKLSLEDAAKTKKADFVATLQAGLNEGGGYRKTPLVVEEFDEEQKEMLRGLEILAVQSVARTNNASPTVAEEALGRELLTLLGRTPNPANAFHLCVHLGLMKHHENLYAREAGVHKEFSDEAMAQARALIESPPADPEANIRRDLTHLKVYAIDSEDTNEVDDGLSVETLPDGAGERIWVHIADVSRWVPEDSPLCEEARRRRTTIYLPEGAIPMFPAEVAHGVLSLRPGKECFSLSMGITLGENGNITDVIVTPALVKVTYRLTYDDVEDMLVNGIAGSAEEWELGRLDKLAQLRHRFRCEQGSVDRFLKCPDHTVKVVENPSAPGGYDVKVTLEDPSSRSIRLVTEMMVLVGEGMGRIGGSEKIPLPFRHQKPPDTFPEDELEALPAKYCRAQASGAYRYMSAATTATTPQQHWGLGLASYVQWSSPIRRYLDLLAHYQVKRWLVGQATLDGSVVMGQVEAGEGIVQTANRVMRKTNKYWITEYLSKLAGSDVEAYVVSYRDQREQGGKVVYNLLLLGLGVTLPYMEAGLTLKLGELVFVRVITSSSRNLFTKISWRRMSAAEKSASEGRLGDEVALAGLLGG 2730
MSA QI PGS+VVFD++VRGR P LGLVT S+V KKK TYTVQ V G + TVA RQVRY++PGGS YQA+DLAAFE E DEGL+EE WDMML+E + AGSD +DDPRGMAELLFGVGDP+PQQCY AFRLLEGRDGTLYFKRRRDGTYECR+R+AV+VAR +LS EDA K KKADFVA+LQAGLNEGGGYRKTPLVVE+FDEEQ+EML GLEILA QSVARTN AS T AEEALGRELLTLLGR+PNP+NAFHLCV LGLMKHHENLY REAG+ K FS+EAMAQARA+++SPP DPEA+IRRDLTHLKVYAIDSEDTNEVDDGLSVE LPDGAGER+WVHIADVSRWVPE SPL EEARR+RTTIYLPEGA PMFPAEVAHGVLSLR G EC+SLSMGITLGE+G ITDVIVTPALVKVTYRLTYDDVEDMLVNGIAGSA+EWELGRLD+LAQLR+R+RCEQGSVDRF K DH VK VE+PS PGGY VKV EDPS RSIRLVTEMMVLVGEGMG +GG E IPLPFRHQK PD+FPE +LE LP KYCRAQ GAY+YMS+ATTATTPQ HWGLGL SYVQWSSPIRRYLDLLAHYQVKRWL+GQ TLDGS+VM QVEAG+G VQTAN VMRKTNKYW+TEYLSKL GSD+EAYVVSYRD R++GGKV+YNLLLLGLG+TLPYMEAGL+++LGELV VRV+ SS+R+LFTKISWRRMS+AE+SAS+GRL DE ALAGL G
Sbjct: 1 MSAADQIGPGSVVVFDSDVRGRPPALGLVTESSVGKKKLTYTVQPVEAASGSSTKTTVAARQVRYIVPGGSGYQAADLAAFEDSPEIDEGLIEEAWDMMLEE--------------STAGSDXXXXXXXXXXXNDDPRGMAELLFGVGDPSPQQCYHAFRLLEGRDGTLYFKRRRDGTYECRSREAVEVARRQLSQEDAVKAKKADFVASLQAGLNEGGGYRKTPLVVEDFDEEQQEMLSGLEILAAQSVARTNFASRTTAEEALGRELLTLLGRSPNPSNAFHLCVQLGLMKHHENLYMREAGIDKTFSEEAMAQARAMMKSPPPDPEASIRRDLTHLKVYAIDSEDTNEVDDGLSVEALPDGAGERVWVHIADVSRWVPEGSPLYEEARRKRTTIYLPEGAEPMFPAEVAHGVLSLRSGHECYSLSMGITLGESGEITDVIVTPALVKVTYRLTYDDVEDMLVNGIAGSADEWELGRLDELAQLRYRYRCEQGSVDRFQKGLDHNVKAVEDPSVPGGYAVKVIPEDPSCRSIRLVTEMMVLVGEGMGSVGGEEGIPLPFRHQKAPDSFPETDLELLPEKYCRAQ--GAYKYMSSATTATTPQPHWGLGLDSYVQWSSPIRRYLDLLAHYQVKRWLLGQPTLDGSLVMAQVEAGDGAVQTANMVMRKTNKYWVTEYLSKLVGSDMEAYVVSYRDARDKGGKVMYNLLLLGLGITLPYMEAGLSMELGELVVVRVVASSARSLFTKISWRRMSSAERSASDGRLKDEAALAGLPDG 760
BLAST of mRNA_P-fluviatile_contig1.280.1 vs. uniprot
Match: A0A6H5KWU3_9PHAE (RNB domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWU3_9PHAE) HSP 1 Score: 606 bits (1562), Expect = 2.610e-203 Identity = 320/417 (76.74%), Postives = 347/417 (83.21%), Query Frame = 1
Query: 442 MSAVHQISPGSIVVFDTEVRGRAPVLGLVTNSNVTKKKSTYTVQAV----GGGSTATVAPRQVRYVIPGGSFYQASDLAAFEQQQEFDEGLMEEVWDMMLQEGAAAATGGLDGGVGAAAGSDAT-------SDDPRGMAELLFGVGDPTPQQCYQAFRLLEGRDGTLYFKRRRDGTYECRTRDAVKVARLKLSLEDAAKTKKADFVATLQAGLNEGGGYRKTPLVVEEFDEEQKEMLRGLEILAVQSVARTNNASPTVAEEALGRELLTLLGRTPNPANAFHLCVHLGLMKHHENLYAREAGVHKEFSDEAMAQARALIESPPADPEANIRRDLTHLKVYAIDSEDTNEVDDGLSVETLPDGAGERIWVHIADVSRWVPEDSPLCEEARRRRTTIYLPEGAIPMFPAEVAHGVLSLR 1659
MSA QI PGS+VVFD++VRGR P LGLVT S+V KKK TYTVQ V G + TVA RQVRYV+PGGS YQA DLAAFE E DEGL+EE WDMML+E + AGSD +DDPRGMAELLFGVGDP+PQQCY AFRLLEGRDGTLYFKRRRDGTYECR+R+AV+VAR +LS EDA K KKADFVA+LQAGLNEGGGYRKTPLVV +FDEEQ+EML GLEILA QSVARTN AS T AEEALGRELLTLLGR+PNP+NAFHLCV LGLMKHHENLY REAG+ K FS++AM QARA++ESPP DPEA+IRRDLTHLKVYAIDSEDTNEVDDGLSVE LPDGAGER+WVHIADVSRWVPE SPL EEARRRRTTIYLPEGA PMFPAEVAHGVLSLR
Sbjct: 101 MSAADQIGPGSVVVFDSDVRGRPPALGLVTESSVGKKKLTYTVQPVEAASGSSTKTTVAARQVRYVVPGGSGYQAKDLAAFEDSPEIDEGLIEEAWDMMLEE--------------STAGSDXXXXXXXXXNDDPRGMAELLFGVGDPSPQQCYHAFRLLEGRDGTLYFKRRRDGTYECRSREAVEVARRQLSQEDAVKAKKADFVASLQAGLNEGGGYRKTPLVVGDFDEEQQEMLSGLEILAAQSVARTNFASRTTAEEALGRELLTLLGRSPNPSNAFHLCVQLGLMKHHENLYMREAGIDKTFSEKAMTQARAMMESPPPDPEASIRRDLTHLKVYAIDSEDTNEVDDGLSVEALPDGAGERVWVHIADVSRWVPEGSPLYEEARRRRTTIYLPEGAEPMFPAEVAHGVLSLR 503
BLAST of mRNA_P-fluviatile_contig1.280.1 vs. uniprot
Match: A0A6H5KI93_9PHAE (RNB domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI93_9PHAE) HSP 1 Score: 433 bits (1113), Expect = 6.030e-139 Identity = 217/273 (79.49%), Postives = 240/273 (87.91%), Query Frame = 1
Query: 1927 KVVENPSAPGGYDVKVTLEDPSSRSIRLVTEMMVLVGEGMGRIGGSEKIPLPFRHQKPPDTFPEDELEALPAKYCRAQAS-----GAYRYMSAATTATTPQQHWGLGLASYVQWSSPIRRYLDLLAHYQVKRWLVGQATLDGSVVMGQVEAGEGIVQTANRVMRKTNKYWITEYLSKLAGSDVEAYVVSYRDQREQGGKVVYNLLLLGLGVTLPYMEAGLTLKLGELVFVRVITSSSRNLFTKISWRRMSAAEKSASEGRLGDEVALAGLLGG 2730
+ VE+PS PGGY VKV EDPS RSIRLVTEMMVLVGEGMG +GG E IPLPFRHQK PD FPE +LE LP KYCRAQAS GAY+YMS+ATTATTPQ HWGLGL SYVQWSSPIRRYLDLLAHYQVKRWL+GQ TLDGS+VM +VEAG+G VQTAN VMRKTNKYW+TEYLSKL GSD+EAYVVSYRD RE+GGKV+YNLLLLGLG+TLPYMEAGL+++LGELV VRV+ SS+R+LFTKISWRRMS+AE+SASEGRL DE ALAGL G
Sbjct: 15 RAVEDPSVPGGYAVKVIPEDPSCRSIRLVTEMMVLVGEGMGSVGGKEGIPLPFRHQKAPDNFPEADLELLPEKYCRAQASRGAVSGAYKYMSSATTATTPQPHWGLGLDSYVQWSSPIRRYLDLLAHYQVKRWLLGQPTLDGSLVMAEVEAGDGAVQTANMVMRKTNKYWVTEYLSKLVGSDMEAYVVSYRDAREKGGKVMYNLLLLGLGITLPYMEAGLSMELGELVVVRVVASSARSLFTKISWRRMSSAERSASEGRLKDEAALAGLPDG 287
BLAST of mRNA_P-fluviatile_contig1.280.1 vs. uniprot
Match: A0A835Z4Y9_9STRA (RNB domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4Y9_9STRA) HSP 1 Score: 440 bits (1132), Expect = 1.890e-133 Identity = 295/799 (36.92%), Postives = 427/799 (53.44%), Query Frame = 1
Query: 448 AVHQISPGSIVVFDTEVRGRAPVLGLVTNSNVTKKKSTYTVQAVGGGSTATVAPRQVRYVIPGGSFYQASDL-----AAFEQQQEFDEGLMEEVWDMMLQEGAAAATGGLDGGVGAAAGSDATSDDPRGMAELLFGVGDPTPQQCYQAFRLLEGRDGTLYFKRRRDGTYECRTRDAVKVARLKLSLEDAAKTKKADFVATLQAGLNEGGGYRKTPLVVEEFDEEQ---------KEMLRGLEILAVQSVA----RTNNASPTVAEEALGRELLTLLGRTPNPANAFHLCVHLGLMKHHENLYAREAGVHKEFSDEAMAQARALIESPPA--DPEANIRRDLTHLKVYAIDSEDTNEVDD-------------------------GLSVETLPDGAGERIWVHIADVSRWVPEDSPLCEEARRRRTTIYLPEGAIPMFPAEVAHGVLSLRPGKECFSLSMGITLGENGNITDVIVTPALVKVTYRLTYDDVEDMLVNGIAGSAEEWELGRLDK-LAQLRHRFRCEQGSVDR-------------FLKCPDHTVKVVENPSAPGGYDVKVTLEDPSSRSIRLVTEMMVLVGEGMGRIGGSEKIPLPFRHQKPPDTFPEDE-LEALPAKYCRAQASGAYRYMSAATTATTPQQHWGLGLASYVQWSSPIRRYLDLLAHYQVKRWLVGQATLDGSVVMGQVEAGEGIVQTANRVMRKTNKYWITEYLSKLAGSDVEAYVVSYRDQREQGGKVVYNLLLLGLGVTLPYMEAGLTLKLGELVFVRVITSSSRNLFTKISWRRMSA 2664
A I PG +++F+ G VLGLVT + K + V+ G +VAP+ VRYV+PGG+ Y + AA QE +E L+ W++++++ L+G + P AEL +G TPQ C AF LL G G LYFK + DG YE R V K E A + ++ LQ LN G G +P VV + E+ + L ++ A++S+A R P +E G LL+ L R P ANAF LCV LG++ H NL+ R + S+ A A+A + DP+A +R DLT LK YAIDS DT +SVE LP+G ER+WVHIADVSRWV + S L ++A RR+TT+YLPE ++PMFP ++A VLSL G+ C +LSMG+ L + G I D+ V + + VTYRLTY+ V++ML + + E + L + + + H+ + + R L H+ VV + +A G + V+L+DP S++LVTE+M++ GEGM R+G + I +PFR Q+ P + P++ LE PA+YCRA AS YR+MS A + P HWGLGL YVQWSSPIRR+ DL+ H+QVKRWL GQ L G+ V V + EG +Q AN++ R +++YW+ EYL + A AYV+ Y D RE+GGKV+Y++LL LG + + E +T++ G+ + V V ++ R++ ++ ++SA
Sbjct: 78 AAFDIEPGCLIMFERN-SGDQAVLGLVTERD---GKRNFLVEGPTG--KLSVAPKAVRYVLPGGASYTSQQRHGLASAATNSAQEDEETLVHTAWELLVEDPDL-----LEGPL-----------TPGAFAELA--LGGSTPQDCLAAFGLLTGEWGRLYFKAKGDGAYEARAGYLVDELVRKRDAEAAEEARRDALRRRLQDLLNAGAGRALSPAVVPGVNAEEGAAASLPDAEGALSEADVAALRSLAAMAGRCMGRDPPHPDEVDGGALLSRLARLPTRANAFRLCVQLGILDDHANLFLRGTDFERGASEAAAAEALSAAADGDGGEDPDAAVRVDLTRLKAYAIDSADTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVSVERLPNGR-ERVWVHIADVSRWVQQGSALDQDAARRQTTLYLPEQSVPMFPRDLAENVLSLTAGRPCPALSMGVILNDAGAIEDLTVVASTIVVTYRLTYEHVDEMLYDKYIHTDEAHAVTSLSRHIYTVFHKRPVSEANDCRGDIKPAFQMLTRSTLSKHAHSKHVVPDAAAEDGRGIVVSLDDPDRSSVQLVTELMIMSGEGMARLGREQGIGMPFRCQRAPASPPDEGYLEQFPARYCRAVAS--YRFMSGAIVSAEPGIHWGLGLDGYVQWSSPIRRFNDLVVHWQVKRWLHGQTPLSGADVAKLVASQEGTLQAANKIARDSSRYWLIEYLRRTADEPHVAYVLGYNDNRERGGKVIYDILLEELGAVVKHPETSITMEPGDALRVTVAQAAPRSMTLRLRCAKVSA 849
BLAST of mRNA_P-fluviatile_contig1.280.1 vs. uniprot
Match: UPI0008F98AEC (ribonuclease R n=1 Tax=Geitlerinema sp. PCC 9228 TaxID=111611 RepID=UPI0008F98AEC) HSP 1 Score: 348 bits (892), Expect = 1.860e-102 Identity = 257/688 (37.35%), Postives = 365/688 (53.05%), Query Frame = 1
Query: 586 GSTATVAPRQVRYVIPGGSFYQASDLAAFEQQQE--FDEGLMEEVWDMMLQEGAAAATGGLDGGVGAAAGSDATSDDPRGMAELLFGVGDPTPQQCYQAFRLLEGRDGTLYFKRRRDGTYECRTRDAVKVARLKLSLEDAAKTKKA--DFVATLQAGLNEGGGYRKTPLVVEEFDEEQKEMLRGLEILAVQSVARTNNASPTVAEEALGR---ELLTLLGRTPNPANAFHLCVHLGLMKHHENLYAREAGVHKEFSDEAMAQARALIESPPADPEANIRRDLTHLKVYAIDSEDTNEVDDGLSVETLPDGAGERIWVHIADVSRWVPEDSPLCEEARRRRTTIYLPEGAIPMFPAEVAHGVLSLRPGKECFSLSMGITLGENGNITDVIVTPALVKVTYRLTYDDVEDMLVNGIAGSAEEWELGRLDKLAQLRHRFRCEQGSVDRFLKCPDHTVKVVENPSAPGGYDVKVTLEDPSSRSIRLVTEMMVLVGEGMGRIGGSEKIPLPFRHQKPPDTFPEDELEALPAKYCRAQASGAYRYMSAATTATTPQQHWGLGLASYVQWSSPIRRYLDLLAHYQVKRWLVGQAT-LDGSVVMGQVEAGEGIVQTANRVMRKTNKYWITEYLSKLAGSDVEAYVVSYRDQREQGGKVVYNLLLLGLGVTLPYMEAGLTLKLGELVFVRVITSSSR 2625
G + TV PRQV YV+PGG Y D+ +F+QQ E +D +E W+ LD G A P ++ELLF D P QCY A+ LL + LYFK++ + YE R A +VA LK E A + +K +F+ ++ L EG E+ + L LE LA V EE GR ++L +L R AF L V LGL HENL+ R + + +F + + A+ ++SP AD + N R DLTHLKVY ID E T E+DDG+S+E L DG ERIWVHIAD SRW+ L EARRR TT+YLP G IPMFP +A G +SL GKEC +LS G+ L +G I D + P+ + TYRLTY+DV++ML G+ E +G K A++RH +R +QG++ + P+ ++KV ++ + ++V + P+ R+ V EMM+L GE G ++ +P+R Q+ P+ PE+EL LPA R +S R M + T+ TP +H LGL Y Q +SPIRRY DLLAH+Q+K L G+ V V + Q A +V R+TN+YW EYL + + +A ++ + + G + LL LG+ LP M +++ G+ + VRV + R
Sbjct: 36 GQSHTVHPRQVTYVVPGGD-YTPEDIPSFQQQVEAYWDPSSLEVAWEF------------LDSDTGTIA--------PEELSELLFS--DQQPAQCYAAYYLLS--EDKLYFKQKGNNRYE--PRSATQVADLKHQQEVAIQKQKELEEFLERVRQAL-EGESV--------EWTASDRPRLEALEKLAA------------VGEEPSGRTARDILAILERPETSEAAFQLLVDLGLWSPHENLFLRRSQIPTQFPAKVLEVAQQYLDSPLADRDRN-RLDLTHLKVYTIDDESTQEIDDGVSIEYLEDGT-ERIWVHIADPSRWIFPGDELDVEARRRSTTLYLPTGMIPMFPEALATGPMSLVQGKECPALSFGVILDADGAIADYTIAPSTIVPTYRLTYEDVDEMLDLGVQAEPEILAIG---KWAEIRHSWRQKQGAIS--ISMPECSIKVSDDDN----ISIQVIEDSPARRA---VAEMMILTGEVAACYGEQNQLAIPYRQQQQPELPPEEELMQLPAGAVR--SSAMRRCMPRSETSLTPGRHASLGLDRYAQVTSPIRRYSDLLAHFQLKAHLRGEEPPFSPEQVQEIVASVSAAAQEATQVERQTNRYWGLEYLRRQGDTVWQALMLRWLRPDDNLGAI----LLEELGLELP-MRFTRSIQPGDRLEVRVTYADPR 654
BLAST of mRNA_P-fluviatile_contig1.280.1 vs. uniprot
Match: A0A3D1PIL9_9CYAN (RNB domain-containing ribonuclease n=1 Tax=Cyanobacteria bacterium UBA11049 TaxID=2055787 RepID=A0A3D1PIL9_9CYAN) HSP 1 Score: 347 bits (889), Expect = 7.360e-102 Identity = 247/681 (36.27%), Postives = 366/681 (53.74%), Query Frame = 1
Query: 586 GSTATVAPRQVRYVIPGGSFYQASDLAAF--EQQQEFDEGLMEEVWDMMLQEGAAAATGGLDGGVGAAAGSDATSDDPRGMAELLFGVGDPTPQQCYQAFRLLEGRDGTLYFKRRRDGTYECRTRDAVKVARLKLSLEDAAKTKKADFVATLQAGLNEGGGYRKTPLVVEEFDEEQKEMLRGLEILAVQSVARTNNASP---TVAEEALGRELLTLLGRTPNPANAFHLCVHLGLMKHHENLYAREAGVHKEFSDEAMAQARALIESPPADPEANIRRDLTHLKVYAIDSEDTNEVDDGLSVETLPDGAGERIWVHIADVSRWVPEDSPLCEEARRRRTTIYLPEGAIPMFPAEVAHGVLSLRPGKECFSLSMGITLGENGNITDVIVTPALVKVTYRLTYDDVEDMLVNGIAGSAEEWELGRLDKLAQLRHRFRCEQGSVDRFLKCPDHTVKVVENPSAPGGYDVKV-TLEDPSSRSIRLVTEMMVLVGEGMGRIGGSEKIPLPFRHQKPPDTFPEDELEALPAKYCRAQASGAYRYMSAATTATTPQQHWGLGLASYVQWSSPIRRYLDLLAHYQVKRWLVGQAT-LDGSVVMGQVEAGEGIVQTANRVMRKTNKYWITEYLSKLAGSDVEAYVVSYRDQREQGGKVVYNLLLLGLGVTLPYMEAGLTLKLGELVFVRV 2607
G + ++APRQ+ Y + G + Y+ S++ AF E Q D +E W+++++EG S P MA LLF + TP QCY A LL + LYFK++ D YE RT V + +L +E + ++ +F+ ++ +N + E +D ++ + + +L+V++V N T L +E + LGR P AF L V LG+ HENL+ R + + EF + + A+ ++ PP DP++ R DLTHLKVY ID + T+E+DDG+S E L DG ER+WVHIAD +RWV + L EARRR TT+YLP G PMFP +A G +SL GK C +LS G+ L E G I + + +L+K TYRLTY+DV++ML G+ E E+ + A+ R +R QG++ + P+ T+KV ++ ++ + L D SSR +LV EMM+L GE GR G + + LPFR Q P+ PE+EL LPA RA A R M + + TP +H GLGL Y Q +SPIRRY DLL H+Q+K L G + +++ + Q + V R+TN+YW EYL + +A V+ + RE + +L+ LG+ LP M ++ LGE +FV+V
Sbjct: 36 GQSHSLAPRQIAYEVRGQT-YKPSEIPAFLAEVQPYLDPSSLEVAWELLVEEGG--------------------SVTPAAMANLLFS--EQTPPQCYAAHYLLS--EDKLYFKQKGDA-YEPRTAAQVAERKHQLEVEANRQREQQEFLQRIEQAIN------GEAVEWERYDRQRLDAIAKYAVLSVEAVRLGTNQDALVRTYPPVVLVQETMNTLGRPATPQAAFQLLVDLGVWSPHENLFLRRSQIPVEFPSKVLEVAQQRLDFPPPDPDSE-RLDLTHLKVYTIDDQSTSEIDDGVSWEHLADGR-ERLWVHIADPTRWVVPEDELDLEARRRGTTMYLPTGMCPMFPVALATGPMSLVQGKICCALSFGVILSERGAIEEYSIHTSLIKPTYRLTYEDVDEMLELGVEA---EPEIEAIANWAKRRQMWRQAQGAIS--INLPESTIKVKDD-------EIMIEVLSDSSSR--QLVAEMMILAGEVAGRYGMAHNLALPFRGQPQPELPPEEELLMLPAGPVRACAMR--RCMPRSEMSITPARHAGLGLEMYTQATSPIRRYSDLLTHFQLKAHLRGDIPPFSAEQLRDVMQSVTAVAQEISLVERQTNRYWALEYLRRYPQQVWQATVLMWL--REDSRLAL--ILIEDLGLQLP-MFCKRSVNLGEQIFVKV 661
BLAST of mRNA_P-fluviatile_contig1.280.1 vs. uniprot
Match: K9XXK3_STAC7 (Exoribonuclease II n=2 Tax=Stanieria TaxID=102115 RepID=K9XXK3_STAC7) HSP 1 Score: 343 bits (879), Expect = 1.310e-100 Identity = 250/706 (35.41%), Postives = 372/706 (52.69%), Query Frame = 1
Query: 586 GSTATVAPRQVRYVIPGGSFYQASDLAAF--EQQQEFDEGLMEEVWDMMLQEGAAAATGGLDGGVGAAAGSDATSDDPRGMAELLFGVGDPTPQQCYQAFRLLEGRDGTLYFKRRRDGTYECRTRDAVKVARLKLSLEDAAKTKKADFVATLQAGLNEGGGYRKTPLVVEEFDEEQKEMLRGLEILAVQSVARTNNASPTVAEEALGRELLTLLGRTPNPANAFHLCVHLGLMKHHENLYAREAGVHKEFSDEAMAQARALIESPPADPEANIRRDLTHLKVYAIDSEDTNEVDDGLSVETLPDGAGERIWVHIADVSRWVPEDSPLCEEARRRRTTIYLPEGAIPMFPAEVAHGVLSLRPGKECFSLSMGITLGENGNITDVIVTPALVKVTYRLTYDDVEDMLVNGIAGSAEEWELGRLDKLAQLRHRFRCEQGSVDRFLKCPDHTVKVVENPSAPGGYDVKVTLEDPSSRSIRLVTEMMVLVGEGMGRIGGSEKIPLPFRHQKPPDTFPEDELEALP---AKYCRAQASGAYRYMSAATTATTPQQHWGLGLASYVQWSSPIRRYLDLLAHYQVKRWLVGQAT-LDGSVVMGQVEAGEGIVQTANRVMRKTNKYWITEYLSKLAGSDVEAYVVSYRDQREQGGKVVYNLLLLGLGVTLPY-MEAGLTLKLGELVFVRVITSSSRNLFTKISWRRMSAAEKSAS 2682
G + + P++V Y + GG Y+ SD+A F E Q D +E W++++++G D + P+ MAELLF D +P CY A LL +YFK + D YE R+ V+ + +L +E+ +K +F++ LQ L P+ E+ E + L LE +Q + A +E+L+L + + AF L V LG HENL+ R + F + + A+ ++SPP DP++N R DLTHLKVY ID E T E+DDGLSVE DG ++W+HIAD SR V L EARRR T++YLP G I MFP+E+A G +SL G+ C +LS G+ L E G + + + P L+K TYRLTYDDV++ML G+ +E E+ L K A LR ++R +QGS+ + P+ +KV EN ++ + L D S+S +LV EMM+L GE G+ G +PLPFR Q P+ PE+EL LP ++C + R M + +TTP +H LGL SY+Q +SPIRRY DLLAH+Q+K L ++ G + + + A V R+TN+YW EYL V+ + + ++ G + LL LG+ LP+ E +TL G+ + V+V + +I +R ++ +E A+
Sbjct: 36 GQSHKIRPQRVEYTVNGG-LYKPSDIANFINEAQSYLDPSSLEVAWEILVEDG------------------DLVT--PQQMAELLFS--DQSPALCYAAHLLLS--QDKIYFKNKGDA-YEPRSAAQVEEIKHQLEVEEQRNREKEEFISHLQQAL------AGKPV---EWTESDRNKLETLEKFVIQPEYNSRVA----------QEILSLARKGTDSQAAFELLVELGWWSKHENLFLRRSSYPTYFPKKVLDVAQFYLQSPPFDPDSN-RLDLTHLKVYTIDDESTEEIDDGLSVEYSEDGKSAKLWIHIADPSRIVTPGDELDLEARRRSTSLYLPTGMISMFPSELATGPMSLIQGQTCAALSFGVVLDETGLVKEYSIHPTLIKPTYRLTYDDVDEMLDLGVT---KEPEIAELAKWASLRRKWRQQQGSIQILM--PESLIKVKEN------EEIIIELLD-ESKSRQLVAEMMILAGEVAGKYGQEHNLPLPFRGQPQPELPPEEELLQLPPGPVRFCALR-----RCMPRSEISTTPARHASLGLDSYIQVTSPIRRYTDLLAHFQIKAHLRNESLPFSGEELQEIIYSVANSAYEATLVERQTNRYWGLEYLRXXXXXXXXVLVLRWLREEDRLGII----LLEDLGLELPHRFERAVTL--GDRLEVQVTRADPHR--DEIRFREITPSEIQAT 670
BLAST of mRNA_P-fluviatile_contig1.280.1 vs. uniprot
Match: A0A846DPA7_9CYAN (VacB/RNase II family 3'-5' exoribonuclease n=1 Tax=Moorena sp. SIO2B7 TaxID=2607823 RepID=A0A846DPA7_9CYAN) HSP 1 Score: 338 bits (867), Expect = 5.850e-100 Identity = 232/583 (39.79%), Postives = 321/583 (55.06%), Query Frame = 1
Query: 811 PRGMAELLFGVGDPTPQQCYQAFRLLEGRDGTLYFKRRRDGTYECRTRDAVKVARLKLSLEDAAKTKKADFVATLQAGLNEGGGYRKTPLVVEEFDEEQKEMLRGLEILAVQSVARTNNASPTVAEEALGRELLTLLGRTPNPANAFHLCVHLGLMKHHENLYAREAGVHKEFSDEAMAQARALIESPPADPEANIRRDLTHLKVYAIDSEDTNEVDDGLSVETLPDGAGERIWVHIADVSRWVPEDSPLCEEARRRRTTIYLPEGAIPMFPAEVAHGVLSLRPGKECFSLSMGITLGENGNITDVIVTPALVKVTYRLTYDDVEDMLVNGIAGSAEEWELGRLDKLAQLRHRFRCEQGSVDRFLKCPDHTVKVVENPSAPGGYDVKVTLEDPSSRSIRLVTEMMVLVGEGMGRIGGSEKIPLPFRHQKPPDTFPEDELEALPAKYCRAQASGAYRYMSAATTATTPQQHWGLGLASYVQWSSPIRRYLDLLAHYQVKRWLVGQATLDGSVVMGQV-EAGEGIVQTANRVMRKTNKYWITEYLSKLAGSDVEAYVVSYRDQREQGGKVVYNLLLLGLGVTLPY 2556
P MA+LLF D +P CY A LL G +YFK++ D +YE R+ V+ R +L +E + K +F+A ++ L + ++ E + L +E L +Q +TN L +++L L+G+ P AF L V LG HENL+ R + F+ + + A+ ++SPP DP+ N R DLTHLKVY ID E T E+DDGLSVE L DG R+W+HIAD +R V L EARRR T++YLP G I MFP E+A G +SL GK C +LS GI LGE G + D + P+L+K TYRLTYDDV++ML GI E EL L A+ R +R QGS+ ++ P+ +KV ++ ++ + L D +SRS +LV EMM+L GE G G IPLPFR Q P+ PE+EL LPA R+ A R M + TP +H GLGL +Y Q +SPIRRY DLLAH+Q+K L G + S M + + A V R+TN+YW EYL + A + V+ + + + G + LL LG+ LP+
Sbjct: 1 PSEMAQLLFS--DQSPALCYAAHTLLVG--DKIYFKKKGD-SYEPRSATQVEEIRHQLEVEKQREQHKQEFLAQVEKALAKEAV---------KWTESDRSRLEAIEKLVLQP-EQTNR---------LAQDILELVGQGKTPEAAFELLVDLGWWTQHENLFLRRSSYPVNFAKKVVEVAQCCLDSPPCDPDVN-RLDLTHLKVYTIDDESTKEIDDGLSVEYLGDGKPPRLWIHIADPTRLVFPGDELDLEARRRSTSLYLPTGMISMFPEELATGPMSLVQGKVCPALSFGIILGEEGTVQDYTIHPSLIKPTYRLTYDDVDEMLQLGIKA---EPELEELATWAKRREEWRRSQGSIS--IQMPESNIKVKQDD------EIVIELLD-NSRSRQLVAEMMILAGEVAGSYGQENNIPLPFRGQPQPELPPEEELIQLPAGPVRSCA--LRRCMPRSEMGITPNRHAGLGLNTYTQVTSPIRRYTDLLAHFQIKAHLRGDSLPFSSEEMQDIIYSVTTSAYEATLVERQTNRYWGLEYLRRNANEIWQVLVLRWLREDDNLGLI----LLEDLGLELPH 540
BLAST of mRNA_P-fluviatile_contig1.280.1 vs. uniprot
Match: A0A351KYL7_9CYAN (RNB domain-containing ribonuclease n=3 Tax=Cyanobacteria TaxID=1117 RepID=A0A351KYL7_9CYAN) HSP 1 Score: 341 bits (874), Expect = 6.920e-100 Identity = 248/677 (36.63%), Postives = 360/677 (53.18%), Query Frame = 1
Query: 586 GSTATVAPRQVRYVIPGGSFYQASDLAAFEQQQE--FDEGLMEEVWDMMLQEGAAAATGGLDGGVGAAAGSDATSDDPRGMAELLFGVGDPTPQQCYQAFRLLEGRDGTLYFKRRRDGTYECRTRDAVKVARLKLSLEDAAKTKKADFVATLQAGLNEGGGYRKTPLVVEEFDEEQKEMLRGLEILAVQSVARTNNASPTVAEEALGRELLTLLGRTPNPANAFHLCVHLGLMKHHENLYAREAGVHKEFSDEAMAQARALIESPPADPEANIRRDLTHLKVYAIDSEDTNEVDDGLSVETLPDGAGERIWVHIADVSRWVPEDSPLCEEARRRRTTIYLPEGAIPMFPAEVAHGVLSLRPGKECFSLSMGITLGENGNITDVIVTPALVKVTYRLTYDDVEDMLVNGIAGSAEEWELGRLDKLAQLRHRFRCEQGSVDRFLKCPDHTVKVVENPSAPGGYDVKVTLEDPSSRSIRLVTEMMVLVGEGMGRIGGSEKIPLPFRHQKPPDTFPEDELEALPAKYCRAQASGAYRYMSAATTATTPQQHWGLGLASYVQWSSPIRRYLDLLAHYQVKRWLVGQATLDGSVVMGQVEAGEGIV-QTANRVMRKTNKYWITEYLSKLAGSDVEAYVVSYRDQREQGGKVVYNLLLLGLGVTLPYMEAGLTLKLGELVFVRV 2607
G T+ +QV Y + G Y+ SD+ F ++ E D +E W+ +++EG S DP MA LLF + +P QCY A+ LL + LYFK++ +YE R+ + V + +L + +T++ +F A ++ L + E+ + + L LE A+Q T A+ E L L R NP A L V LG+ HENL+ R + + FS + + A E P DP++ R DLT LKVY ID E T E+DDGLS E+LPDG +R+WVHIAD +RW+ L +ARRR TT+YLP G IPMFPAE+A G +SL GK C +LS GI L + G +++ + +++K TYRLTY+DV++ML G+ E E+ + +LAQLR +R QG+++ L P+ +KV + ++V LED +R +LV EMM+L GE R + ++ LPFR Q PD P++EL LPA RA A R M + + TP +H LGL SY Q +SPIRRY DLL H+Q+K L G+ + + +V G Q A V R+T +YW EYL + + +A ++ + + E+ G + LL LG+ LP M+ +L LGE + VRV
Sbjct: 36 GQARTINAKQVSYEV-NGETYKPSDIPRFRKEVEPFIDPESLEVAWEFLVEEG--------------------LSVDPPSMAMLLFS--EKSPAQCYAAYYLLS--EDKLYFKQK-GSSYEPRSTNQVAEIKHQLEVARERETQQKEFWARVEQALRG---------IQVEWQQSDRHRLEALERFALQGDEATGRAAAV--------ETLAALKRPENPQGAIDLLVDLGVWSRHENLFLRRSSIPVNFSTKVLEVAHQRTEVAPPDPDSE-RLDLTRLKVYTIDDESTKEIDDGLSWESLPDGK-QRLWVHIADPTRWLTPGDELDLDARRRSTTLYLPTGMIPMFPAELATGPMSLVQGKICNALSFGIILDDEGGVSEYSIHASIIKPTYRLTYEDVDEMLQLGVPA---ELEIDAIARLAQLRQLWRRSQGAINIHL--PEACIKVDADE-----IHIEV-LEDSPAR--QLVAEMMILAGEVAARYAQTHQLALPFRSQPQPDLPPDEELLQLPAGPVRACA--IRRCMPRSEMSITPARHASLGLDSYTQVTSPIRRYSDLLTHFQIKAHLRGEQPPFSAEQVKEVMIGVTTASQEATLVERQTQRYWALEYLRRTSEQAWQAVLLRWLREDERLGLI----LLEDLGLELP-MQIKRSLALGEHLEVRV 647
BLAST of mRNA_P-fluviatile_contig1.280.1 vs. uniprot
Match: A0A8J7BTR4_9CYAN (VacB/RNase II family 3'-5' exoribonuclease n=6 Tax=unclassified Trichocoleus TaxID=2628910 RepID=A0A8J7BTR4_9CYAN) HSP 1 Score: 341 bits (874), Expect = 7.110e-100 Identity = 247/665 (37.14%), Postives = 352/665 (52.93%), Query Frame = 1
Query: 586 GSTATVAPRQVRYVIPGGSFYQASDLAAFEQQQE--FDEGLMEEVWDMMLQEGAAAATGGLDGGVGAAAGSDATSDDPRGMAELLFGVGDPTPQQCYQAFRLLEGRDGTLYFKRRRDGTYECRTRDAVKVARLKLSLEDAAKTKKA--DFVATLQAGLNEGGGYRKTPLVVEEFDEEQKEMLRGLEILAVQSVARTNNASPTVAEEALGR----ELLTLLGRTPNPANAFHLCVHLGLMKHHENLYAREAGVHKEFSDEAMAQARALIESPPADPEANIRRDLTHLKVYAIDSEDTNEVDDGLSVETLPDGAGERIWVHIADVSRWVPEDSPLCEEARRRRTTIYLPEGAIPMFPAEVAHGVLSLRPGKECFSLSMGITLGENGNITDVIVTPALVKVTYRLTYDDVEDMLVNGIAGSAEEWELGRLDKLAQLRHRFRCEQGSVDRFLKCPDHTVKVVENPSAPGGYDVKVTLEDPS-SRSIRLVTEMMVLVGEGMGRIGGSEKIPLPFRHQKPPDTFPEDELEALPAKYCRAQASGAYRYMSAATTATTPQQHWGLGLASYVQWSSPIRRYLDLLAHYQVKRWLVGQATLDGSVVMGQVEAGEGIV-QTANRVMRKTNKYWITEYLSKLAGSDVEAYVVSYRDQREQGGKVVYNLLLLGLGVTL 2550
G + T+ PRQV Y + G S Y+ S++ F ++ E D +E W+++++ D+ + DP GMA LLF D +P CY A LL + LYFK++ D YE R A +VA LK L A + ++ +F+ +Q L + E+ + L LE A T+ EEA R E L LGR P F L V LGL HENL+ R + + +FS + + A+ +ESPP D + R DLT LKVY ID E T E+DDG+S+E L DG +++W+HIAD +RW+ L EARRR TTIYLP G IPMFP E+A G +SL GK C++LS G+ L E+G I D + +L+K TYRLTY+DV++ML G+ G E EL + A+ R +R QG++ + P+ ++KV +D ++T+E S+S +LV EMM+L GE R G + + +PFR+Q P+ PE+EL LPA R+ A R M + + TP +H LGL +Y Q +SPIRRY DLLAH+Q+K L G + M ++ G V Q A V R+TN+YW EYL + +A V+ + + E ++ L L L + L
Sbjct: 36 GQSYTLHPRQVTYTVTGQS-YKPSEIPQFLKEVEAYLDPSSLEVAWELLVE--------------------DSETVDPAGMALLLFS--DQSPPLCYTAHYLLS--EDKLYFKQKGDH-YE--PRSATQVAELKHQLTVAGQKQREWQEFLTRIQQALTDQAV---------EWQNSDRGRLEALERFA------------TLGEEASHRMPALETLAALGRPETPQAGFQLLVDLGLWSVHENLFVRRSQIPTQFSTKVLEVAKRCLESPPPDLDVEGRLDLTGLKVYTIDDESTREIDDGVSLEYLEDGR-QKLWIHIADPTRWIVPGDDLDLEARRRSTTIYLPTGIIPMFPPELATGPMSLIQGKICYALSFGVILDESGAIADYQIQTSLIKPTYRLTYEDVDEMLELGVLG---ESELQAIASWAKRRQTWRHSQGAIS--INMPESSIKV---------HDDEITIEVLEVSQSRQLVAEMMILAGEVAARYGQAHNLAIPFRNQTQPELPPEEELLQLPAGPVRSCA--IRRCMPRSEMSITPARHASLGLDTYTQVTSPIRRYTDLLAHFQIKAHLRGTPLPFSAEEMKELLMSVGAVAQEATSVERQTNRYWGLEYLRRHTHEVWQALVLRWLREHENLALILLEDLGLELAIRL 634 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.280.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig1.280.1 >prot_P-fluviatile_contig1.280.1 ID=prot_P-fluviatile_contig1.280.1|Name=mRNA_P-fluviatile_contig1.280.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=893bp MGTSATLVLSVLVAFAGNGVHESHAFMLHSRTGGRQYYLGSSINNGGAGSback to top mRNA from alignment at P-fluviatile_contig1:3411359..3425300+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig1.280.1 ID=mRNA_P-fluviatile_contig1.280.1|Name=mRNA_P-fluviatile_contig1.280.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=13942bp|location=Sequence derived from alignment at P-fluviatile_contig1:3411359..3425300+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig1:3411359..3425300+ >mRNA_P-fluviatile_contig1.280.1 ID=mRNA_P-fluviatile_contig1.280.1|Name=mRNA_P-fluviatile_contig1.280.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=5358bp|location=Sequence derived from alignment at P-fluviatile_contig1:3411359..3425300+ (Porterinema fluviatile SAG_2381)back to top |