mRNA_P-fluviatile_contig1.27.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig1.27.1
Unique NamemRNA_P-fluviatile_contig1.27.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig1.27.1 vs. uniprot
Match: D7FS97_ECTSI (Cytochrome b5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS97_ECTSI)

HSP 1 Score: 401 bits (1030), Expect = 1.440e-138
Identity = 210/293 (71.67%), Postives = 230/293 (78.50%), Query Frame = 1
Query:   13 DSVLVGDQQEGSAPKPRYYTPDDVALHNCAEDCWLSLFGQQVVDITELILTNRGPLADPLIAAAGTDVSHWFSLASSADSKKLRPKGL--SAKPGSKPRPFKAAGNEDTGNRSSEGAQPNECEYVEGPRTFVDPHTGLTVPYLPMGRFLHVPPNFPTTKWITNFGLPWWRDQKWVVGK-LTRKARPVRVVNILSRQEDDLLVACENTIADIQERYLDYNAHAASYTWKFLKDEASSYFILHSNFVPAKMDQTLDENGIVDDDVAFERLGIADAGIDGYVPVLHIYFNDDLTIA 882
            D+   GDQ + S+PK R+YTPDDVALHNCAEDCWLSLFGQ V+D+TELIL NRGPLADPLIAAAGTDVSHWF L    D KK +P+G+  S K  +K    K     D GN   E     ECE    PRTFVDP TGLT PYLPMGRFLHVPPNFPTTKW T+FGLPWWRD+K VVGK LTRKARP+RVVNILSRQED LLVACE+TIADIQERYL+YNAHAASYTWK L+DE          FVPAKMDQTL+ENGIVDDD+AFE+LGI D   DGY+PVLHIYFNDDLTIA
Sbjct:    3 DNATTGDQDDSSSPKARFYTPDDVALHNCAEDCWLSLFGQ-VLDLTELILANRGPLADPLIAAAGTDVSHWFHLPPPPDVKKPKPRGIGGSDKSSNKALSTKIVKEGDDGNGRLE-----ECENASDPRTFVDPQTGLTTPYLPMGRFLHVPPNFPTTKWSTSFGLPWWRDRKRVVGKKLTRKARPLRVVNILSRQEDQLLVACEDTIADIQERYLEYNAHAASYTWKVLQDE---------KFVPAKMDQTLEENGIVDDDLAFEKLGIDD---DGYMPVLHIYFNDDLTIA 277          
BLAST of mRNA_P-fluviatile_contig1.27.1 vs. uniprot
Match: A0A6H5KWF6_9PHAE (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWF6_9PHAE)

HSP 1 Score: 292 bits (747), Expect = 1.050e-95
Identity = 170/289 (58.82%), Postives = 196/289 (67.82%), Query Frame = 1
Query:   25 VGDQQEGSAPKPRYYTPDDVALHNCAEDCWLSLFGQQVVDITELILTNRGPLADPLIAAAGTDVSHWFSLASSADSKKLRPKGLSAKPGSKPRPFKAAGNEDTGNRSSEG-AQPNECEYVEGPRTFVDPHTGLTVPYLPMG-RFLHVPPNFPTT-KWITNFGLPWWRDQKWVVGKLTRKARPVRVVNILSRQEDDLLVACENTIADIQERYLDYNAHAASYTWKFLKDEASSYFILHSNFVPAKMDQTLDENGIVDDDVAFERLGIADAGIDGYVPVLHIYFNDDLTIA 882
             GDQ + S+ K R+YTPDDVALHNCAEDCWLSLFGQ V+D+TELIL NRGPLADPLIAAAGTDVSHWF L    D KK +P+G+    G   R    A +  T     +G  +  ECE    PRTFVDP TGLT PYLPMG +   +PPN  T    +T   LP        + KLTRKARP+RVVNILSRQED LLVACE+TIADIQ+              +FL   A+S  +    FVPAKMDQTL+ENGIVDDD+AFE+LGI D   DGY+P+LHIYFNDDLTIA
Sbjct:    7 TGDQDDSSSQKARFYTPDDVALHNCAEDCWLSLFGQ-VLDLTELILANRGPLADPLIAAAGTDVSHWFHLPPPPDVKKSKPRGI----GGGDRSNNKALSTKTVKEGGDGNGRLEECENASEPRTFVDPQTGLTTPYLPMGSQPTRIPPNLGTACDSLTTVTLPH------RIEKLTRKARPLRVVNILSRQEDQLLVACEDTIADIQDE-------------RFLGVGANSVLLHLQKFVPAKMDQTLEENGIVDDDLAFEKLGIDD---DGYMPILHIYFNDDLTIA 268          
BLAST of mRNA_P-fluviatile_contig1.27.1 vs. uniprot
Match: A0A836C925_9STRA (Cytochrome b5 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C925_9STRA)

HSP 1 Score: 266 bits (681), Expect = 2.980e-86
Identity = 141/274 (51.46%), Postives = 178/274 (64.96%), Query Frame = 1
Query:   61 RYYTPDDVALHNCAEDCWLSLFGQQVVDITELILTNRGPLADPLIAAAGTDVSHWFSLASSADSKKLRPKGLSAKPGSKPRPFKAAGNEDTGNRSSEGAQPNECEYVEGPRTFVDPHTGLTVPYLPMGRFLHVPPNFPTTKWITNFGLPWWRDQKWVVGKLTRKARPVRVVNILSRQEDDLLVACENTIADIQERYLDYNAHAASYTWKFLKDEASSYFILHSNFVPAKMDQTLDENGIVDDDVAFERLGIADAGIDGYVPVLHIYFNDDLTIA 882
            RY+TP+DVA HNCAEDCW+S  G +V+D+T LI  +RGPLA+P+IAAAG+D+SHWF                               N  TG+                P+T +DP TGLTV Y P GRF+HVPPNFPTT W T+FG PWW+D ++VVG LT +AR VR+VN+L++QED+LLV+CE+T+A IQ RY + NAHA SYTWK L   +       + FVP  M++TL+ENG+VDD  AF +LG ADA  D   PVLHIYFNDDLT+A
Sbjct:   13 RYFTPEDVAQHNCAEDCWVSA-GHRVLDLTALIEEHRGPLAEPIIAAAGSDISHWF-------------------------------NPKTGD----------------PKTCIDPVTGLTVAYTPSGRFIHVPPNFPTTAWRTDFGAPWWQDARYVVGTLTARARMVRIVNVLTQQEDELLVSCEDTVASIQRRYEERNAHAGSYTWKALSSGSQD-----AKFVPMDMEKTLEENGVVDDSDAFGKLG-ADA--DCSAPVLHIYFNDDLTVA 230          
BLAST of mRNA_P-fluviatile_contig1.27.1 vs. uniprot
Match: A0A7S2F938_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2F938_9STRA)

HSP 1 Score: 233 bits (593), Expect = 4.240e-73
Identity = 124/274 (45.26%), Postives = 162/274 (59.12%), Query Frame = 1
Query:   55 KPRYYTPDDVALHNCAEDCWLSLFGQQVVDITELILTNRGPLADPLIAAAGTDVSHWFSLASSADSKKLRPKGLSAKPGSKPRPFKAAGNEDTGNRSSEGAQPNECEYVEGPRTFVDPHTGLTVPYLPMGRFLHVPPNFPTTKWITNFGLPWWRDQKWVVGKLTRKARPVRVVNILSRQEDDLLVACENTIADIQERYLDYNAHAASYTWKFLKDEASSYFILHSNFVPAKMDQTLDENGIVDDDVAFERLGIADAGIDGYVPVLHIYFNDDLT 876
            K R+YTP+D+A HNCA+D W+S+   +V D+TELI  NRGPLA PLI  AG D+SHWF      DSK                         TG                G +TF+DP  G+ VPY P GRFLHVPP  PT  W T+FG  WW D+  ++G+LT K R V++VN+L+ Q D L V  E T+ +I++RY++YN HA SYTWK L+++A         FVP  M++TLDENG+ D+   F++LGI     D Y PV+H+YFNDDLT
Sbjct:    3 KRRFYTPEDLAAHNCAKDIWVSI-NYKVFDLTELIQANRGPLAQPLIEVAGQDISHWF------DSK-------------------------TG----------------GVKTFMDPSRGVRVPYTPHGRFLHVPPPEPTAAWNTDFGTAWWLDEDLIIGRLTEKTRKVQIVNVLTHQTDLLTVCSEETLEEIRDRYMEYNKHAQSYTWKKLEEDA---------FVPMDMEKTLDENGVPDESEEFDKLGI---DFDYYYPVIHVYFNDDLT 216          
BLAST of mRNA_P-fluviatile_contig1.27.1 vs. uniprot
Match: A0A7S2C328_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C328_9STRA)

HSP 1 Score: 218 bits (555), Expect = 3.140e-67
Identity = 113/283 (39.93%), Postives = 162/283 (57.24%), Query Frame = 1
Query:   34 QQEGSAPKPRYYTPDDVALHNCAEDCWLSLFGQQVVDITELILTNRGPLADPLIAAAGTDVSHWFSLASSADSKKLRPKGLSAKPGSKPRPFKAAGNEDTGNRSSEGAQPNECEYVEGPRTFVDPHTGLTVPYLPMGRFLHVPPNFPTTKWITNFGLPWWRDQKWVVGKLTRKARPVRVVNILSRQEDDLLVACENTIADIQERYLDYNAHAASYTWKFLKDEASSYFILHSNFVPAKMDQTLDENGIVDDDVAFERLGIADAGIDGYVPVLHIYFNDDLTIA 882
            Q+   A + RYYTP DVA HN A DC +S+F  +V D+T+LI  N+GPLA PL+  AG D+SHWF+                                           P +C      +T++DP  G+T+PY P GRF+ VPP+ PT  W T+FG+PWW+++  +VG+L+ K R + +VN+L++Q+D L V  E T+ +I++RY++YN HA SYTWK L +           FV   M +TLDENG++D+   FE L I +   D Y P++H+YF D+LTIA
Sbjct:    5 QKARIASRRRYYTPGDVAAHNSATDCLVSIF-HRVFDLTDLIRDNQGPLAQPLVEVAGQDISHWFT-----------------------------------------NNPVQC------KTYIDPDRGMTLPYTPHGRFIDVPPSEPTASWSTSFGIPWWQNEDIIVGRLSEKTRKIMIVNVLTQQKDVLEVCSEETMLEIRDRYMEYNKHAESYTWKKLHE---------GKFVVMNMQKTLDENGVIDESDDFEELEIDE---DFYYPIIHVYFEDNLTIA 227          
BLAST of mRNA_P-fluviatile_contig1.27.1 vs. uniprot
Match: K3WC11_GLOUD (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WC11_GLOUD)

HSP 1 Score: 217 bits (553), Expect = 6.940e-67
Identity = 120/276 (43.48%), Postives = 154/276 (55.80%), Query Frame = 1
Query:   55 KPRYYTPDDVALHNCAEDCWLSLFGQQVVDITELILTNRGPLADPLIAAAGTDVSHWFSLASSADSKKLRPKGLSAKPGSKPRPFKAAGNEDTGNRSSEGAQPNECEYVEGPRTFVDPHTGLTVPYLPMGRFLHVPPNFPTTKWITNFGLPWWRDQKWVVGKLTRKARPVRVVNILSRQEDDLLVACENTIADIQERYLDYNAHAASYTWKFLKDEASSYFILHSNFVPAKMDQTLDENGIVDDDVAFERLGIADAGIDGYVPVLHIYFNDDLTIA 882
            K RYYTP +VA  N A DCW+S+   +V+D++ELI+ NRG L  PL+  AG D+SHWF                                           +  + +Y       VDP   ++ P+LP GRFLHV P  P   W T+  LPWW+D K+ VGKLTRKAR + VVN+L++Q   L V CE TI DIQ RYL+ N+HAASYTWK+L D+          FVP KM+ TL+ENGI D+ + FE L   D     Y P+LH+YFNDDLT+A
Sbjct:   15 KLRYYTPHEVAARNQAHDCWVSI-NHRVLDLSELIMDNRGILTQPLVLHAGEDISHWFD-----------------------------------------PETEDIKY------HVDPERNISFPFLPYGRFLHVAPLEPLGDWKTSDFLPWWKDPKYTVGKLTRKARWIEVVNVLTQQRHSLQVCCEETIHDIQTRYLEMNSHAASYTWKYLDDD---------EFVPLKMNCTLEENGIPDESLMFEHL---DMDEHQYKPILHLYFNDDLTVA 230          
BLAST of mRNA_P-fluviatile_contig1.27.1 vs. uniprot
Match: A0A7S1TZ39_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZ39_9STRA)

HSP 1 Score: 218 bits (555), Expect = 7.630e-67
Identity = 124/309 (40.13%), Postives = 162/309 (52.43%), Query Frame = 1
Query:   40 EGSAPKPR-YYTPDDVALHNCAEDCWLSLFGQQVVDITELILTNRGPLADPLIAAAGTDVSHWFSLASSADSKKLRPKGLSAKPGSKPRPFKAAGNEDTGNRSSEGAQPNECEYVEGPRTFVDPHTGLTVPYLPMGRFLHVPPNFPTTKWITNFGLPWWRDQKWVVGKLTRKARPVRVVNILSRQEDDLLVACENTIADIQERYLDYNAHAASYTWKFLKDEASSYFILHSNFVPAKMDQTLDENGIVDDDVAFERLGIADAGIDG---------------------------YVPVLHIYFNDDLTIA 882
            EG   K R YYTP+++ALHNCAEDCW+S+FG+ V D+TE I  NRGPLA P+I  +G DVSHWF                                              + +YV   R  +DP T L +PYLPMGRFLHVPP FP++ W T+FG PWW+D    +G L++K R VR++N L+RQ D+L+V  E TI +IQ+R L YNAHAASYTWK L++           F    M +TL ENG++D+   F+ L     G                              Y+P L +Y+NDDLT+A
Sbjct:    4 EGDMKKRRRYYTPEEMALHNCAEDCWVSVFGK-VYDLTEFIAANRGPLAQPIILMSGKDVSHWFD--------------------------------------------EKTKYV---RMHIDPETNLRLPYLPMGRFLHVPPAFPSSAWRTDFGTPWWQDADLCIGALSQKTRVVRIINALTRQADELIVPTEETIDEIQDRCLSYNAHAASYTWKSLRE---------GKFEVLDMAKTLAENGVIDELDNFKMLDPKPEGFPPEETDLTESEKRIVEEANRYDESDIHAEYIPELVLYYNDDLTVA 255          
BLAST of mRNA_P-fluviatile_contig1.27.1 vs. uniprot
Match: A0A6A3YCI2_9STRA (Cytochrome b5 heme-binding domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3YCI2_9STRA)

HSP 1 Score: 207 bits (528), Expect = 4.510e-63
Identity = 116/284 (40.85%), Postives = 152/284 (53.52%), Query Frame = 1
Query:   28 GDQQEGSAPKPRYYTPDDVALHNCAEDCWLSLFGQQVVDITELILTNRGPLADPLIAAAGTDVSHWFSLASSADSKKLRPKGLSAKPGSKPRPFKAAGNEDTGNRSSEGAQPNECEYVEGPRTFVDPHTGLTVPYLPMGRFLHVPPNFPTTKWITNFGLPWWRDQKWVVGKLTRKARPVRVVNILSRQEDDLLVACENTIADIQERYLDYNAHAASYTWKFLKDEASSYFILHSNFVPAKMDQTLDENGIVDDDVAFERLGIADAGIDGYVPVLHIYFNDDLTI 879
            G+       + R++TP +VA HN A DCW+S+   +V+D++ LI  N G L  PL+  AG D+SHWF                                          A   + +Y       +DP   L+VP+ P GRFLHVPP  PT +W T   LPWWRD ++VVG+LT+KAR + +VN+L++Q   L V CE T+A+IQ RYL  NAHA SYTWK L+D+          FVP  M +TLDENGI D+   FER    D     + P LHIYF+DDLTI
Sbjct:    9 GESDTKQQGRSRFFTPREVATHNLATDCWVSI-NHRVLDLSRLIEENPGVLVQPLVLHAGEDISHWFD-----------------------------------------ADTEDVKY------HIDPDRNLSVPFTPYGRFLHVPPPDPTAQWRTADLLPWWRDPQYVVGRLTKKARWLEIVNVLTQQSHSLEVCCEETLAEIQSRYLRLNAHAGSYTWKHLEDD---------EFVPLHMQRTLDENGIPDESPIFERF---DMDEQQFKPTLHIYFDDDLTI 232          
BLAST of mRNA_P-fluviatile_contig1.27.1 vs. uniprot
Match: A0A7S2F2A0_9DINO (Hypothetical protein n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2F2A0_9DINO)

HSP 1 Score: 207 bits (526), Expect = 8.220e-63
Identity = 113/293 (38.57%), Postives = 155/293 (52.90%), Query Frame = 1
Query:   19 VLVGDQQEGSAPKP----RYYTPDDVALHNCAEDCWLSLFGQQVVDITELILTNRGPLADPLIAAAGTDVSHWFSLASSADSKKLRPKGLSAKPGSKPRPFKAAGNEDTGNRSSEGAQPNECEYVEG-PRTFVDPHTGLTVPYLPMGRFLHVPPNFPTTKWITNFGLPWWRDQKWVVGKLTRKARPVRVVNILSRQEDDLLVACENTIADIQERYLDYNAHAASYTWKFLKDEASSYFILHSNFVPAKMDQTLDENGIVDDDVAFERLGIADAGIDGYVPVLHIYFNDDLTIA 882
            V     ++G  PK     RYYTP D+A HN   DCW+S F   V D+T L+   +GPLA P+I AAGTD+SHWF                                                + V G P+  +DP TGL   Y P GR++HVPP  P + W TN+  PWW D+++ +GK +++ R V VVN++++Q++ L V  E T+A+IQERY  +NAHA SYTWK L              +P  MD+ L+ENG+ D+   F RLG+     D ++PV+H+YFNDDLT A
Sbjct:    3 VFADSVRKGDVPKEYKIRRYYTPADIAKHNLEHDCWVSYFNH-VYDLTPLLAEYKGPLAQPIIDAAGTDISHWF------------------------------------------------DSVTGQPKMHIDPTTGLEEIYCPWGRYIHVPPQGPESNWATNYQTPWWEDRRYFIGKSSKRTRKVAVVNLMTKQKNTLEVPVEETVAEIQERYEVFNAHAGSYTWKRLG-------------IPLNMDKNLEENGMKDETEQFMRLGVDP---DDHIPVIHLYFNDDLTEA 230          
BLAST of mRNA_P-fluviatile_contig1.27.1 vs. uniprot
Match: A0A1V9Z4R5_9STRA (Cytochrome b5-like protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z4R5_9STRA)

HSP 1 Score: 206 bits (523), Expect = 2.050e-62
Identity = 110/275 (40.00%), Postives = 155/275 (56.36%), Query Frame = 1
Query:   61 RYYTPDDVALHNCAEDCWLSLFGQQVVDITELILTNRGPLADPLIAAAGTDVSHWFSLASSADSKKLRPKGLSAKPGSKPRPFKAAGNEDTGNRSSEGAQPNECEYVEGPRTFVDPHTGLTVPYLPMGRFLHVPPNFPTTKWITNFGLPWWRDQKWVVGKLTRKARPVRVVNILSRQEDDLLVACENTIADIQERYLD--YNAHAASYTWKFLKDEASSYFILHSNFVPAKMDQTLDENGIVDDDVAFERLGIADAGIDGYVPVLHIYFNDDLTI 879
            RYYTP++VA+H CA+DCW+ +F + V+DI+ L+  +RG L  PL+  AG D++HWF+                                           P   E     +T +DP   + +P+LP GRFLHVPP  P T W T    PWW D+++V+G +T K R +++VN L+ Q   + V  E TIA+IQ+RY+D  YNAHA SYTWK+L           + F+P  MD++L ENG+ D+ + FE+L + DA  D Y P+LHIY+NDDLTI
Sbjct:   11 RYYTPEEVAIHKCADDCWVVVFSR-VLDISGLVAQHRGKLTQPLVQHAGEDITHWFN-------------------------------------------PETREV----KTHIDPERNIRLPFLPYGRFLHVPPPEPVTDWNTLELTPWWTDEQYVIGLITAKVRMIQIVNTLTHQSHSIQVCSEETIAEIQKRYVDLQYNAHAGSYTWKYLDG---------NEFIPLDMDKSLAENGVEDESLEFEKLNL-DA--DDYQPILHIYYNDDLTI 225          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.27.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FS97_ECTSI1.440e-13871.67Cytochrome b5 n=1 Tax=Ectocarpus siliculosus TaxID... [more]
A0A6H5KWF6_9PHAE1.050e-9558.82Cytochrome b5 heme-binding domain-containing prote... [more]
A0A836C925_9STRA2.980e-8651.46Cytochrome b5 n=1 Tax=Tribonema minus TaxID=303371... [more]
A0A7S2F938_9STRA4.240e-7345.26Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2C328_9STRA3.140e-6739.93Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
K3WC11_GLOUD6.940e-6743.48Cytochrome b5 heme-binding domain-containing prote... [more]
A0A7S1TZ39_9STRA7.630e-6740.13Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A6A3YCI2_9STRA4.510e-6340.85Cytochrome b5 heme-binding domain-containing prote... [more]
A0A7S2F2A0_9DINO8.220e-6338.57Hypothetical protein n=1 Tax=Alexandrium andersoni... [more]
A0A1V9Z4R5_9STRA2.050e-6240.00Cytochrome b5-like protein n=1 Tax=Achlya hypogyna... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:490553..494881 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score407.1
Seed ortholog evalue6.8e-111
Seed eggNOG ortholog2880.D7FS97
Preferred nameCYB5D1
KEGG koko:K05747,ko:K11448,ko:K11642
KEGG Pathwayko04062,ko04144,ko04520,ko04530,ko04666,ko04810,ko05100,ko05130,ko05131,ko05132,ko05231,map04062,map04144,map04520,map04530,map04666,map04810,map05100,map05130,map05131,map05132,map05231
EggNOG free text desc.heme binding
EggNOG OGsCOG5274@1,KOG0537@2759
EC3.6.4.12
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03036,ko04131,ko04812
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionCytochrome b5
Ec32 orthologEc-05_004830.1
Exons6
Model size885
Cds size885
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.27.1prot_P-fluviatile_contig1.27.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig1 490553..494881 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815275.892164-CDS-P-fluviatile_contig1:490552..4906841622815275.892164-CDS-P-fluviatile_contig1:490552..490684Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 490553..490684 +
1693561366.298475-CDS-P-fluviatile_contig1:490552..4906841693561366.298475-CDS-P-fluviatile_contig1:490552..490684Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 490553..490684 +
1622815275.9051583-CDS-P-fluviatile_contig1:491738..4920521622815275.9051583-CDS-P-fluviatile_contig1:491738..492052Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 491739..492052 +
1693561367.047578-CDS-P-fluviatile_contig1:491738..4920521693561367.047578-CDS-P-fluviatile_contig1:491738..492052Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 491739..492052 +
1622815275.9153552-CDS-P-fluviatile_contig1:492806..4929001622815275.9153552-CDS-P-fluviatile_contig1:492806..492900Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 492807..492900 +
1693561367.0700328-CDS-P-fluviatile_contig1:492806..4929001693561367.0700328-CDS-P-fluviatile_contig1:492806..492900Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 492807..492900 +
1622815275.930048-CDS-P-fluviatile_contig1:493373..4934721622815275.930048-CDS-P-fluviatile_contig1:493373..493472Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 493374..493472 +
1693561367.081172-CDS-P-fluviatile_contig1:493373..4934721693561367.081172-CDS-P-fluviatile_contig1:493373..493472Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 493374..493472 +
1622815275.9384737-CDS-P-fluviatile_contig1:494120..4942101622815275.9384737-CDS-P-fluviatile_contig1:494120..494210Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 494121..494210 +
1693561367.0912669-CDS-P-fluviatile_contig1:494120..4942101693561367.0912669-CDS-P-fluviatile_contig1:494120..494210Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 494121..494210 +
1622815275.9478958-CDS-P-fluviatile_contig1:494725..4948811622815275.9478958-CDS-P-fluviatile_contig1:494725..494881Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 494726..494881 +
1693561367.1010218-CDS-P-fluviatile_contig1:494725..4948811693561367.1010218-CDS-P-fluviatile_contig1:494725..494881Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 494726..494881 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig1.27.1

>prot_P-fluviatile_contig1.27.1 ID=prot_P-fluviatile_contig1.27.1|Name=mRNA_P-fluviatile_contig1.27.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=295bp
MEANDSVLVGDQQEGSAPKPRYYTPDDVALHNCAEDCWLSLFGQQVVDIT
ELILTNRGPLADPLIAAAGTDVSHWFSLASSADSKKLRPKGLSAKPGSKP
RPFKAAGNEDTGNRSSEGAQPNECEYVEGPRTFVDPHTGLTVPYLPMGRF
LHVPPNFPTTKWITNFGLPWWRDQKWVVGKLTRKARPVRVVNILSRQEDD
LLVACENTIADIQERYLDYNAHAASYTWKFLKDEASSYFILHSNFVPAKM
DQTLDENGIVDDDVAFERLGIADAGIDGYVPVLHIYFNDDLTIA*
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mRNA from alignment at P-fluviatile_contig1:490553..494881+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig1.27.1 ID=mRNA_P-fluviatile_contig1.27.1|Name=mRNA_P-fluviatile_contig1.27.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4329bp|location=Sequence derived from alignment at P-fluviatile_contig1:490553..494881+ (Porterinema fluviatile SAG_2381)
ATGGAAGCAAATGACAGCGTGTTGGTCGGCGATCAGCAGGAGGGTAGTGC CCCAAAGCCAAGATACTACACTCCGGACGATGTAGCCCTGCACAACTGCG CGGAGGACTGCTGGTTATCGCTTTTTGGGCAGGTGCCTGTGATGTTGTAT ACGCTGAAATATCGCAGAGTGCATACTTCTCTCGATCAAAGCACTTGGAC AGAACTCCGGAATGAAGAAATTTGAAACCGCGTCAAGAAAATTATCGTTC TCTACTCCATATACGCGTTTGCTGCAAGCAGCAGATCTTCAAGGGCGTCA AAGGTTTGACGTAAAAGTCCACACCGAGCGAACGAAGAAACTGTCTGCCG CGTATTCGTACATTGTAGTTGTAATTCTTCAGGCTGTCAAGGTTTTGAAA CATATTGCACATAATACAAGTTTTTTGCTGTAGCAAGAAATGCAAAAGTT GGAGGAAGTAGGGCCGGTGTACGCATTGTTGGTTCGCATTAAGAATGATT CAATGCTACTTCTAAATTACGTTCTGTATCCTCCCTCAGAAGGTTTTTCA TATTCTTCGTCTGCGGCACATGCGCGCTTTTCGTTTTCAAGAGAGACATG TCCGGCCATCTATCGAGGTGCAACGTGTCTAGTCATACTCTACCGACTCA GCGCCTCAGGGCAAAATAGCACCGGCAGTGTTGACCAGCGTGCTTCGATA GCACCGCCTTACAGATATCCATGGTCCACGTGCCATTAACGAATCCGCCC TGTAAGGATAACACTCTTAACTTCATTGGCTAGGAGGCCATCGATCAAAC GATCGGGGTCCAGCCAGGAATTTTCACGCGGAAATGTCGATGCCCAAAAG AAAACAGTGGGAGGCCGTTTCTTACAGTGTTGGAGTTTCCAGTTTAAAAA AACAAAACATGATTTGAAAGTTCGATTCGGCTTGTTGTGACCGCTGCTCG GATCAATATTCGTTCACGCCACTCGTCCTTCCGTTCTACAGCATACAGAA GCTCGATCCACCCTCCTTGAGGCCGTGTTCACCGGTGCACACTCAAAATG AAAGAGCTTCACGGAACATCTGCAATGGTGCTTGTAAAGTACCTGATCGG TTCCAGATGAGCCGGCATGCATGCACTATGCATCTCAGCGGGACTGCCTT CGTTTAACAGCTGCGTAATCGCGACGTCGCGACGAGCAGGTGGTAGACAT AACAGAACTGATCCTCACTAACCGGGGGCCGCTGGCAGACCCGCTCATAG CGGCCGCGGGTACCGACGTCTCCCACTGGTTCTCCCTCGCATCATCGGCC GATAGCAAGAAATTAAGACCAAAGGGGTTAAGCGCTAAGCCTGGAAGCAA GCCGCGGCCGTTCAAGGCGGCGGGAAATGAAGACACCGGTAATCGCAGCA GTGAAGGCGCGCAACCGAACGAGTGCGAGTACGTGGAAGGCCCGCGGACT TTTGTGGATCCACACACGGGCCTGACAGTGCCGTACCTGCCGATGGGGAG GTGGGTTGGTGGTAATCTTCAATGTAGAGTTGCGTTTGCTAACGTTGGTC GTTCGAAAGTTTTTCCACGCGTGAAGATGGACAAAACGACTGAGAGGAGA CGAAGGTAGGACAGGCAAGGCTGTCGTTGCGAGTGCTTGTTCTGTACAAA CCTTGAAACCAGAAACTCCGCTTGATATTGGAAATCTGTCAATTCCCCTG TACACGACCGGTCACAGCCGTACATCGCTGTGTGAGAAAACATCAAGCAT CTCACAGGTGAAAGCATAAAAAGCGGTGTACCACGACTGTCTTTGGTGGT GGTCAGAGGAGAAAGGCATTGCGTTCTGGAAGCCAACATCCATGTTGCGA AATTGTATGCGAACGATACCGTACACCTGAGGAAGATGCGCTCTGCTACT CTCTTGACTTTAGTACAGCGACTCGTTGTAGGAAAGTGATAAGCGTGATC CAGTGAAGCCTCGATGAACTCACTCCATCACTTCTTGGGAGCGACACAGG GTCAGTAGTATCAACACCGTCTCACACAATATCGCGACCCTCCCGTCGGG CTGCCGCCGCCGCCGAATCGCATTTTCGTCCCATCTTCGTGTGCTACGCC ATATTCATTCAACGTGATCTCGATAGCACAATACTCCGGCCTGTCGCAGC GTCCCGGAATCAGAGGATGCGCGATGAACCCTTGGTGTCCACAGCAAGTA ACATACATCGCCCGTCGGTTGTCCCCTAAACGTCATCGCCTGCTTTTGGT TCAGGTTCCTGCACGTGCCGCCTAACTTCCCCACTACCAAGTGGATCACA AACTTTGGCCTACCGTGGTGGCGAGATCAAAAATGGGTAGTTGGCAAGGT GCAGATGTAGGGTGGTCTAGCGCTTCCTCGCCCTTTTTCTGAGGAGGTGA ATTTATTGCAGTGCTGCAAGCTTCCAGAGCTTGCTCACTATATATTAAAT GCACGCCTGGAAGTTAATCTATTGAAGTAAGTATCATCAGGCCTGCCGTT ACACGCAACGCTCAAGGAATCCGCGCGCTGACCCGCCGATACCTGCTGCC GCCCTTCTCTTCACCGCGCATAGGAACCCATCAGGTCCCTCTTGTGCCGT TGCACGCGAGCCTCCTGTATTGTGGGAAGGTTGACCGTGAATGGCGAGCC GCGAAAACCTGCGGCATTTCTTCAAGTTTAAGCCAATACGATGTACCTCG TCATGCCCATGTGGTACCCCACACGCACGGCTCTCCTGCGGCGGCACGAT TACTCTCCGTCACAAACACTTGCTCATTTCGCGCCGTACTTGCATGCGCC GTGTATCGTGTACCATGTCAGCTTACGCGGAAAGCGCGGCCGGTGAGGGT GGTGAATATCCTGTCCAGGCAAGAAGACGACCTGCTCGTGGCGTGCGAGA ATACAATCGCAGATATTCAGGTAGTTTTCGGGTGGTCATATTGCAAAGCG CAGGGCCGCTGGTGATTTACAGTCACCGCGAACTCACAAAATGTTTGCCA ATCTTTTCAGAAAAGCAATAGGTGTATCGATGTGATGCAAGTTTCCGTAG TCTACGCCGCACAACCGTGCGCCATACGGTTCATGCTGTCTGAAACTGCA GAAAATATTCCAGTTTTTTCCCGAAGGCTGCTTCCTCACTTGGAAACCGA AGACAGCTTTCTGTACACACGGAGGATGTAGGCTAGATGGATCTATTCGC CTGCTTTTCATCGCATCTCCTTCGATGCACGCTCTCTTTAAGGACCGTAC GCGGGATTGCATCGCCAAAATCAAACTTCATAAGCCACCCAAGTTCTTCA TATTTCATACCGATAGGCTTGCGGAAACATGCACGTGCTCGTGCGCGCCC CTACGCAATCACCATTCTCGCCCATTGCGCCGAAGGCAGGGGCTTCAGCA TACATACGATAACAAAGTCACTGTTGCGAATTTGCGACAAACCGGCGAGC GATTGCAATAGCCAATCACCAAATGAGCGCGAAAAACACAGTACCTTTGG CTTCTTCTGCTGTCCGTCTAACTCGCTCTCTCTCGCGCGCTCCCGGTGAT CCTCTGTGCCTTCTTCAGGAGCGCTACCTTGACTACAACGCTCACGCCGC GAGCTACACGTGGAAGTTCCTCAAGGACGAGGCGAGTTCATACTTTATCT TGCATTCGGTCGTCTGAAGCACGGCTTCAGATATCTTCTGAAAACCAGCA AGTCTTACACGTTACAAGGATCGGGATGCACGTGTACTTCAGACAACTTT GACACCTACCTCGAGCAATGTGCACACCCTATGCGTAGCGGGCAAAGGAA AAGAACGTTCCTTGGGTGGAATTTCAAAGCTCCGGATCTCTTCCTCGTCC GTGGTTCCAATGCGCTCGGCTACACGTAGGTCTGCAAAAAACTCTCGGGC AAAAGCAGTGCCCTCGTTGAGGACTTGAGATTTGGAAATCGATCGCCTAC GTTCACCCTTCTCCGATTCATGCGCGAAAAACTAGCAAAGTTTGACCACA TGTCAATTGAAAATGCATGCATTATCCGTTCAACATTCATCGTCCAAGCT TCACTCTCGCACATGAGGCACGCATGAGGACTAAGGCGTTCGTGCGTAGA AATTTGTACCGAGCAAATGCTTCACCATATAGTCGAAGGGCTCATATCTT CGTGCTTGTTGCTTGTGTGGCAGAATTTCGTACCAGCGAAAATGGACCAA ACGTTGGACGAGAACGGGATTGTGGACGACGACGTTGCCTTTGAGAGGCT TGGAATAGCCGACGCCGGCATAGACGGCTACGTGCCCGTTTTGCACATCT ATTTCAACGACGATCTCACCATCGCATAG
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Coding sequence (CDS) from alignment at P-fluviatile_contig1:490553..494881+

>mRNA_P-fluviatile_contig1.27.1 ID=mRNA_P-fluviatile_contig1.27.1|Name=mRNA_P-fluviatile_contig1.27.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1770bp|location=Sequence derived from alignment at P-fluviatile_contig1:490553..494881+ (Porterinema fluviatile SAG_2381)
ATGGAAGCAAATGACAGCGTGTTGGTCGGCGATCAGCAGGAGGGTAGTGC
CCCAAAGCCAAGATACTACACTCCGGACGATGTAGCCCTGCACAACTGCG
CGGAGGACTGCTGGTTATCGCTTTTTGGGCAGATGGAAGCAAATGACAGC
GTGTTGGTCGGCGATCAGCAGGAGGGTAGTGCCCCAAAGCCAAGATACTA
CACTCCGGACGATGTAGCCCTGCACAACTGCGCGGAGGACTGCTGGTTAT
CGCTTTTTGGGCAGCAGGTGGTAGACATAACAGAACTGATCCTCACTAAC
CGGGGGCCGCTGGCAGACCCGCTCATAGCGGCCGCGGGTACCGACGTCTC
CCACTGGTTCTCCCTCGCATCATCGGCCGATAGCAAGAAATTAAGACCAA
AGGGGTTAAGCGCTAAGCCTGGAAGCAAGCCGCGGCCGTTCAAGGCGGCG
GGAAATGAAGACACCGGTAATCGCAGCAGTGAAGGCGCGCAACCGAACGA
GTGCGAGTACGTGGAAGGCCCGCGGACTTTTGTGGATCCACACACGGGCC
TGACAGTGCCGTACCTGCCGATGGGGAGCAGGTGGTAGACATAACAGAAC
TGATCCTCACTAACCGGGGGCCGCTGGCAGACCCGCTCATAGCGGCCGCG
GGTACCGACGTCTCCCACTGGTTCTCCCTCGCATCATCGGCCGATAGCAA
GAAATTAAGACCAAAGGGGTTAAGCGCTAAGCCTGGAAGCAAGCCGCGGC
CGTTCAAGGCGGCGGGAAATGAAGACACCGGTAATCGCAGCAGTGAAGGC
GCGCAACCGAACGAGTGCGAGTACGTGGAAGGCCCGCGGACTTTTGTGGA
TCCACACACGGGCCTGACAGTGCCGTACCTGCCGATGGGGAGGTTCCTGC
ACGTGCCGCCTAACTTCCCCACTACCAAGTGGATCACAAACTTTGGCCTA
CCGTGGTGGCGAGATCAAAAATGGGTAGTTGGCAAGGTTCCTGCACGTGC
CGCCTAACTTCCCCACTACCAAGTGGATCACAAACTTTGGCCTACCGTGG
TGGCGAGATCAAAAATGGGTAGTTGGCAAGCTTACGCGGAAAGCGCGGCC
GGTGAGGGTGGTGAATATCCTGTCCAGGCAAGAAGACGACCTGCTCGTGG
CGTGCGAGAATACAATCGCAGATATTCAGCTTACGCGGAAAGCGCGGCCG
GTGAGGGTGGTGAATATCCTGTCCAGGCAAGAAGACGACCTGCTCGTGGC
GTGCGAGAATACAATCGCAGATATTCAGGAGCGCTACCTTGACTACAACG
CTCACGCCGCGAGCTACACGTGGAAGTTCCTCAAGGACGAGGCGAGTTCA
TACTTTATCTTGCATTCGGAGCGCTACCTTGACTACAACGCTCACGCCGC
GAGCTACACGTGGAAGTTCCTCAAGGACGAGGCGAGTTCATACTTTATCT
TGCATTCGAATTTCGTACCAGCGAAAATGGACCAAACGTTGGACGAGAAC
GGGATTGTGGACGACGACGTTGCCTTTGAGAGGCTTGGAATAGCCGACGC
CGGCATAGACGGCTACGTGCCCGTTTTGCACATCTATTTCAACGACGATC
TCACCATCGCATAGAATTTCGTACCAGCGAAAATGGACCAAACGTTGGAC
GAGAACGGGATTGTGGACGACGACGTTGCCTTTGAGAGGCTTGGAATAGC
CGACGCCGGCATAGACGGCTACGTGCCCGTTTTGCACATCTATTTCAACG
ACGATCTCACCATCGCATAG
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