mRNA_P-fluviatile_contig1.269.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig1.269.1 vs. uniprot
Match: A0A6H5K5G6_9PHAE (Deubiquitinating enzyme A n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5G6_9PHAE) HSP 1 Score: 403 bits (1036), Expect = 1.510e-115 Identity = 338/609 (55.50%), Postives = 386/609 (63.38%), Query Frame = 3
Query: 822 KSQGWTVWDMAKPPRIGDRFDCLDHFVSSQTRREAMKWREAEVADVRDGEEGTEVLVHYLRWDSKWDRWISPTLQSQRFASYRTRVVSRASKTNAAAQDRKARALPSTEDGYRHSGSMAGEKGSAASTEAMTNSSASSTCTLNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSSGSRGGVTSNTGAPPSRSQSDRSXXXXXXXXXXXXXXXXXXSNDTVTSARGGRDPASASXXXXXXXXXXXXXXXXXXXXKISEXXXXXXXXXXXXXVSNSASRSSALKRSGNAPREATGAGAGRRGSSPAGSGDS--EASADAAFRDAMRRKGLVVVDVEPDGNCLFRSVSHQIYGDVERHYPVRKACVEHMSKHKARFGVFVAEDFRDYLHRIRQPGVWGDDLEIRALEELFDRPIEIYSSEEEELRPMKIDFDASGLDMKMAPIKLSYHGQSHYNSVLDHSLRYPLQPRRSKRILQMRMAQYAHTPRTAVGTCFSRPGGGKAGXXXXXXXXXXXXXXXXXXXXXXXSNGLQKKSPSLRFAGLKESTSLSGRSGSVPKPGGGXXXTRXXXXXXXXXXXXXXXXXXXXXGTKNFAGMALRTLFGGVSGRVA 2642
K WT+WD+AKPP +GDRFDCLD+FVSSQT A KWR AEV DVR +GT+VLV +L+ +SKWDRWIS + + +RFA Y++ A K A L ++E ++ + AGE XXXXXXXXXXXXXXXXXXXXXXX +G S + SR+ SD XXXXXXXX + + ++ GR P S S XXXXXXXXXXXXX A+ + ++ G + A G G+G RGS GSG+ EA+ + AFR+AMRR GL VVDVEPDGNCLFRSVSHQIYGD +RHYPVRKACVEHM +H+ARFGVFVAEDFRDYL RIRQPGVWGDDLEIRALEE+FDRPIEIYSSE E L+PMKIDFDASGLDM MAPIKLSYHGQSHYNSV D SLRYPL PRRSKRILQ+R AQ+AHTP +AV SRPGGGKAG G+ +KS + RFAG KES + S G G X XXXXXXXXXXXXXXXXXXXXX KN AGMALRTLFGGVSGRVA
Sbjct: 710 KKPAWTLWDLAKPPTVGDRFDCLDYFVSSQTGLSAEKWRGAEVMDVRHANKGTQVLVRFLKRNSKWDRWISLSQEPERFAPYQSHAPKVAEKAGGAE-------LLASERAHQDNLGSAGEXXXX-------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAGAKEDEDAIAGLSDPALSKSRVLRSRTHSDLYSSRSPEXXXXXXXXAPPRARENRGTS--GRRPRSQSPAPTHNAAAPQHSGGGGSRDXXXXXXXXXXXXXXXXXT---AAPAGGVRARGPSSVAARGGGSGGRGSPTGGSGEDSEEAAVERAFREAMRRTGLSVVDVEPDGNCLFRSVSHQIYGDADRHYPVRKACVEHMYRHRARFGVFVAEDFRDYLFRIRQPGVWGDDLEIRALEEMFDRPIEIYSSESEGLQPMKIDFDASGLDMGMAPIKLSYHGQSHYNSVRDFSLRYPLHPRRSKRILQIREAQHAHTPGSAVPASLSRPGGGKAGSRGV---------------------GVIEKSCNSRFAGFKESATSSFCVGGGSARSG--RXXXXXXXXXXXXXXXXXXXXXXXXXAKNLAGMALRTLFGGVSGRVA 1270
BLAST of mRNA_P-fluviatile_contig1.269.1 vs. uniprot
Match: D8LLK1_ECTSI (Deubiquitinating enzyme A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLK1_ECTSI) HSP 1 Score: 240 bits (613), Expect = 5.950e-64 Identity = 215/437 (49.20%), Postives = 246/437 (56.29%), Query Frame = 3
Query: 822 KSQGWTVWDMAKPPRIGDRFDCLDHFVSSQTRREAMKWREAEVADVRDGEEGTEVLVHYLRWDSKWDRWISPTLQSQRFASYRTRVVSRASKTNAAAQDRKARALPSTEDGYRHSGSMAGEKGSAASTEAMTNSSASSTCTLNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSSGSRGGVTSNTGAPPSRSQSDRSXXXXXXXXXXXXXXXXXXSNDTVTSARGGRDPASASXXXXXXXXXXXXXXXXXXXXKISEXXXXXXXXXXXXXVSNSASRSSALKRSGNAPREATGAGAGRRGSSPAGSGDS--EASADAAFRDAMRRKGLVVVDVEPDGNCLFRSVSHQIYGDVERHYPVRKACVEHMSKHKARFGVFVAEDFRDYLHRIRQPGVWGDDLEIRALEELFDRPIEIYSSEEEELRPMKIDFDASGL 2126
K + W +WD+AKPP +GDRFDCLD+FVSSQT A KWR AEV DVR +GT+VLV W+ L S+R ++ S AGE XXXXXXXXXXXXXXXXXXXXXXXXX +T G+ ++ D + G DPA + XXXXXXXXXXXXX XXXXXXXX + ++ G +P A G +G RGS GSG+ EA+AD AFR+AMRR GL VVDVEPDGNCLFRSVSHQIYGD +RHYPVRKACVEHM +H+ARFGVFVAEDFRDYL RIRQPGVWGDDLEIRALEE+FDRPIEIYSSE E L+PMKIDFDASG+
Sbjct: 289 KKRAWALWDLAKPPTVGDRFDCLDYFVSSQTGLSAEKWRGAEVMDVRHANKGTQVLVSA--------EWVPELLASER--------------------------------AHQDSLGSAGES-----------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITGGLGSASAKGDED--------------------------AIAGLSDPALSKSRVHSGGXXXXXXXXXXXXXXXXXXXXXXXXXP-----------AGGVRARGPSPVAARGGDSGGRGSPTGGSGEDSEEAAADRAFREAMRRTGLSVVDVEPDGNCLFRSVSHQIYGDADRHYPVRKACVEHMYRHRARFGVFVAEDFRDYLFRIRQPGVWGDDLEIRALEEMFDRPIEIYSSESEGLQPMKIDFDASGI 619
BLAST of mRNA_P-fluviatile_contig1.269.1 vs. uniprot
Match: A0A836CLU3_9STRA (OTU domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLU3_9STRA) HSP 1 Score: 181 bits (458), Expect = 4.370e-48 Identity = 89/148 (60.14%), Postives = 108/148 (72.97%), Query Frame = 3
Query: 1824 VEPDGNCLFRSVSHQIYGDVERHYPVRKACVEHMSKHKARFGVFVAEDFRDYLHRIRQPGVWGDDLEIRALEELFDRPIEIYSSEEEELRPMKIDFDAS------------GLDMKMAPIKLSYHGQSHYNSVLDHSLRYPLQPRRSK 2231
+EPDGNCL+R+VS QIYG+ + H VRKACV+HMS H+ RFG FVA DF YL R RQPGVWGDDLEIRALEE+FDRP+ IY++E+ RPMK+DF+ + ++API LSYHG SHYNSV D L YPLQPR+S+
Sbjct: 1 MEPDGNCLYRAVSDQIYGNCDNHLYVRKACVDHMSAHRTRFGTFVAGDFAAYLRRARQPGVWGDDLEIRALEEVFDRPVRIYAAEDPRARPMKMDFEHALEGGGEXXXXXXXXXRRVAPITLSYHGHSHYNSVRDARLVYPLQPRQSQ 148
BLAST of mRNA_P-fluviatile_contig1.269.1 vs. uniprot
Match: A0A7S2D4I9_9STRA (Deubiquitinating enzyme A n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D4I9_9STRA) HSP 1 Score: 161 bits (408), Expect = 4.020e-37 Identity = 81/167 (48.50%), Postives = 107/167 (64.07%), Query Frame = 3
Query: 1782 FRDAMRRKGLVVVDVEPDGNCLFRSVSHQIYGDVERHYPVRKACVEHMSKHKARFGVFVAEDFRDYLHRIRQPGVWGDDLEIRALEELFDRPIEIYSSEEEE---LRPMKIDFDASGLDMKMAPIKLSYHGQSHYNSVLDHSLRYPLQPRRSKRILQMRMAQYAHTP 2273
F + +KG+ VV++E DGNCLFR+V HQIY D ERH +R+ HM ++ RF +F DF Y+ RIR+ GVWGDDLEIRA+EEL DR IEIY +E +E + P+K +FD + PIKLSYHG SHYNSV+D P+ PR + I +R ++ P
Sbjct: 514 FLRGLGKKGMQVVEMEADGNCLFRAVCHQIYDDPERHPELRRQVAAHMESNRERFSIFCTSDFGVYVERIRRNGVWGDDLEIRAMEELIDRSIEIYVAESKEDGTIEPLKTNFDEELTGADVTPIKLSYHGSSHYNSVVDEKTALPIVPRETSVIYDVRHKRHMDEP 680
BLAST of mRNA_P-fluviatile_contig1.269.1 vs. uniprot
Match: A0A7S3HTQ3_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HTQ3_9STRA) HSP 1 Score: 147 bits (371), Expect = 8.380e-32 Identity = 72/158 (45.57%), Postives = 102/158 (64.56%), Query Frame = 3
Query: 1782 FRDAMRRKGLVVVDVEPDGNCLFRSVSHQIYGDVERHYPVRKACVEHMSKHKARFGVFVAEDFRDYLHRIRQPGVWGDDLEIRALEELFDRPIEIYSSEEEELRPMKIDFDASGLDMKMAPIKLSYHGQSHYNSVLDHSLRYPLQPRRSKRILQMRMA 2255
F + + KGL V +E DGNCLFR++SHQ+Y + +RH +R CVEH+ +H+ RF VF +F ++L + + G W DDLEIRALEE+ DR I IYSS + P+ +F+ L + P+ LSYHG SHYNS+ D PL R+S+ +L+ R+A
Sbjct: 423 FLEKLEEKGLHVFAIEGDGNCLFRAISHQLYLEQDRHDELRARCVEHLIRHRKRFEVFSDGNFDEHLQEMSKQGTWADDLEIRALEEITDRVITIYSSTADTYEPINNNFEEKNLLQGVPPLTLSYHGSSHYNSIYDERYPLPLVERKSRLLLRSRLA 580
BLAST of mRNA_P-fluviatile_contig1.269.1 vs. uniprot
Match: A0A6B2L958_9EUKA (Deubiquitinating enzyme A n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L958_9EUKA) HSP 1 Score: 128 bits (322), Expect = 4.400e-29 Identity = 62/133 (46.62%), Postives = 88/133 (66.17%), Query Frame = 3
Query: 1794 MRRKGLVVVDVEPDGNCLFRSVSHQIYGDVERHYPVRKACVEHMSKHKARFGVFVAEDFRDYLHRIRQPGVWGDDLEIRALEELFDRPIEIYSSEEEELRPMKIDFDASGLDMKMAPIKLSYHGQSHYNSVLD 2192
+ RKGL + E DGNCLFR+V+HQ+YGD E H VRK C+++M K + F FV EDF +Y+ R RQ V+G+ LE++A+ EL++RPI IY++ EE L + ++ P++LSYH +HYNSV D
Sbjct: 18 LERKGLKITKTEEDGNCLFRAVAHQVYGDEEMHDVVRKNCMDYMDKERNHFSQFVVEDFTEYIKRKRQDTVYGNHLELQAIAELYNRPILIYTTSEEPLNLFQDEYQTDN-----PPMRLSYHYGNHYNSVWD 145
BLAST of mRNA_P-fluviatile_contig1.269.1 vs. uniprot
Match: A0A0N5ABF2_9BILA (Deubiquitinating enzyme A n=1 Tax=Syphacia muris TaxID=451379 RepID=A0A0N5ABF2_9BILA) HSP 1 Score: 128 bits (322), Expect = 1.960e-28 Identity = 62/138 (44.93%), Postives = 89/138 (64.49%), Query Frame = 3
Query: 1782 FRDAMRR-KGLVVVDVEPDGNCLFRSVSHQIYGDVERHYPVRKACVEHMSKHKARFGVFVAEDFRDYLHRIRQPGVWGDDLEIRALEELFDRPIEIYSSEEEELRPMKIDFDASGLDMKMAPIKLSYHGQSHYNSVLD 2192
F D +RR +G ++ + DG CLFR+V+ Q+YGD E H VR+ C+++M K++ F FV E+F DYL R R+P V G+ +E++A+ E+F RPIE+Y E +AS AP++LSYHG SHYNSV+D
Sbjct: 10 FEDRLRRTRGFIIKQMRGDGACLFRAVADQVYGDEEMHLDVRRLCLDYMEKNRDHFSQFVTEEFSDYLARKRRPDVEGNHVELQAISEIFLRPIELYEYSTEPKNIFSPHIEASSSLQPNAPLRLSYHGSSHYNSVID 147
BLAST of mRNA_P-fluviatile_contig1.269.1 vs. uniprot
Match: A0A2R5G0B2_9STRA (Deubiquitinating enzyme A n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G0B2_9STRA) HSP 1 Score: 132 bits (332), Expect = 5.080e-28 Identity = 71/153 (46.41%), Postives = 99/153 (64.71%), Query Frame = 3
Query: 1755 DSEASADAAF-RDAMRRKGLVVVDVEPDGNCLFRSVSHQIYGDVERHYPVRKACVEHMSKHKARFGVFVAED-FRDYLHRIRQPGVWGDDLEIRALEELFDRPIEIYSSEE--EELRPMKIDFDAS-GLDMKMAP---IKLSYHGQSHYNSVL 2189
+S A D F ++ + + L V VEPDGNCLFR+V+HQ+YGD ERH VR C +++ K++ RF + D F DY+ RQ VWGDD EIRA+EEL+DRP+EIY++ P+K+ F+ D KM P I++S+HG +HYNSV+
Sbjct: 386 ESSAGLDGVFLKNLQKDRELTVYSVEPDGNCLFRAVAHQVYGDSERHDIVRSDCCDYLEKNRERFAPLLGSDQFDDYVANKRQLKVWGDDPEIRAMEELYDRPVEIYAATGLGSNTEPLKLHFEGDLPSDSKMGPYLPIRISFHGNNHYNSVI 538
BLAST of mRNA_P-fluviatile_contig1.269.1 vs. uniprot
Match: A0A0N4V8V9_ENTVE (Deubiquitinating enzyme A n=1 Tax=Enterobius vermicularis TaxID=51028 RepID=A0A0N4V8V9_ENTVE) HSP 1 Score: 128 bits (322), Expect = 6.790e-28 Identity = 67/141 (47.52%), Postives = 98/141 (69.50%), Query Frame = 3
Query: 1779 AFRDAMRR-KGLVVVDVEPDGNCLFRSVSHQIYGDVERHYPVRKACVEHMSKHKARFGVFVAEDFRDYLHRIRQPGVWGDDLEIRALEELFDRPIEIY--SSEEEELRPMKIDFDASGLDMKMAPIKLSYHGQSHYNSVLD 2192
AF D +RR +G V+ + DG CLFR+V+ Q+YGD E H VR+ C+++M K++ F FV EDF DYL R R+P V G+ +E++A+ E++ RPIE+Y S+E + + +I+ +S LD AP++LSYHG SHYNSV+D
Sbjct: 70 AFEDRLRRTRGFVIKKMRGDGACLFRAVADQVYGDEEMHLDVRRLCLDYMEKNRDHFSQFVTEDFSDYLARKRRPDVEGNHIELQAISEIYLRPIELYEYSTEPKNIFNPRIE-PSSSLDPN-APLRLSYHGSSHYNSVID 208
BLAST of mRNA_P-fluviatile_contig1.269.1 vs. uniprot
Match: A0A2H1CEX1_FASHE (Deubiquitinating enzyme A n=1 Tax=Fasciola hepatica TaxID=6192 RepID=A0A2H1CEX1_FASHE) HSP 1 Score: 128 bits (322), Expect = 1.720e-27 Identity = 63/133 (47.37%), Postives = 87/133 (65.41%), Query Frame = 3
Query: 1794 MRRKGLVVVDVEPDGNCLFRSVSHQIYGDVERHYPVRKACVEHMSKHKARFGVFVAEDFRDYLHRIRQPGVWGDDLEIRALEELFDRPIEIYSSEEEELRPMKIDFDASGLDMKMAPIKLSYHGQSHYNSVLD 2192
M +KG +V V+PDG CLFRSVSHQI+GD E+H VRK V++M K+K F ++ EDF Y+ R + P +G+ +EI+A+ EL++RP+EIY E + D+ K PI+LSYHG HYNSV+D
Sbjct: 218 MEKKGWKIVKVQPDGACLFRSVSHQIFGDEEKHDVVRKQVVDYMLKNKEHFSPYITEDFDRYICRKKDPTCYGNHVEIQAMAELYNRPVEIYHDSVEPINVFHADYS------KEFPIRLSYHGHVHYNSVVD 344 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.269.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig1.269.1 >prot_P-fluviatile_contig1.269.1 ID=prot_P-fluviatile_contig1.269.1|Name=mRNA_P-fluviatile_contig1.269.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=853bp MGARPPSRGAAKIMAALREALAVGRDTSESSGMEGSGRSERGDLARFKAAback to top mRNA from alignment at P-fluviatile_contig1:3295411..3303906- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig1.269.1 ID=mRNA_P-fluviatile_contig1.269.1|Name=mRNA_P-fluviatile_contig1.269.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=8496bp|location=Sequence derived from alignment at P-fluviatile_contig1:3295411..3303906- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig1:3295411..3303906- >mRNA_P-fluviatile_contig1.269.1 ID=mRNA_P-fluviatile_contig1.269.1|Name=mRNA_P-fluviatile_contig1.269.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=5118bp|location=Sequence derived from alignment at P-fluviatile_contig1:3295411..3303906- (Porterinema fluviatile SAG_2381)back to top |