mRNA_P-fluviatile_contig1.263.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig1.263.1
Unique NamemRNA_P-fluviatile_contig1.263.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig1.263.1 vs. uniprot
Match: D8LLJ7_ECTSI (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLJ7_ECTSI)

HSP 1 Score: 380 bits (976), Expect = 2.230e-128
Identity = 181/185 (97.84%), Postives = 183/185 (98.92%), Query Frame = 1 
Query:  229 MASPDPAVAEAVARGNPVVFFDVTIGGAPAGRIKMELFKDTCPKTAENFRRFCTGEHRHQGIPTGYKGAPFHRVIKDFMLQGGDFVKGDGTGRMSIYGEKFADENFDLRHTGPGLLSMANSGPNTNGCQFFVTTAKAAWLDGLHVVFGKVLDPASMLTVRKIENVSTGANNKPRLAIVIQECGEL 783
            MASPDPA+AEAVARGNPVVFFDVTIGGAPAGRIKMELFKDTCPKTAENFRRFCTGEHRHQGIPTGYKGAPFHRVIKDFMLQGGDFVKGDGTGRMSIYGEKFADENFDLRHTGPGLLSMANSGPNTNGCQFFVTTAKAAWLDGLHVVFGKVLDPASMLTVRKIENVSTG NNKPRL +VIQECGEL
Sbjct:    1 MASPDPAIAEAVARGNPVVFFDVTIGGAPAGRIKMELFKDTCPKTAENFRRFCTGEHRHQGIPTGYKGAPFHRVIKDFMLQGGDFVKGDGTGRMSIYGEKFADENFDLRHTGPGLLSMANSGPNTNGCQFFVTTAKAAWLDGLHVVFGKVLDPASMLTVRKIENVSTGVNNKPRLTVVIQECGEL 185
[Close]
BLAST of mRNA_P-fluviatile_contig1.263.1 vs. uniprot
Match: A0A835Z972_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z972_9STRA)

HSP 1 Score: 311 bits (796), Expect = 3.510e-101
Identity = 144/185 (77.84%), Postives = 159/185 (85.95%), Query Frame = 1 
Query:  229 MASPDPAVAEAVARGNPVVFFDVTIGGAPAGRIKMELFKDTCPKTAENFRRFCTGEHRHQGIPTGYKGAPFHRVIKDFMLQGGDFVKGDGTGRMSIYGEKFADENFDLRHTGPGLLSMANSGPNTNGCQFFVTTAKAAWLDGLHVVFGKVLDPASMLTVRKIENVSTGANNKPRLAIVIQECGEL 783
            MASPDPAVAEAV RG+PVVF D+ IGG   GRIK+ELF D CPKTAENFR+FCTGE + Q +P GYKGAPFHRVIK FM+QGGDFVKGDGTGRMSIYGEKF DENFDLRHTGPGLLS ANSGPNTNGCQFF T AKA WLDG H VFGKVLDPASM  +RK+ENV+ G +N+PRL +V+ +CGEL
Sbjct:    1 MASPDPAVAEAVDRGSPVVFMDIAIGGTEMGRIKIELFADVCPKTAENFRQFCTGEFKRQNLPVGYKGAPFHRVIKGFMIQGGDFVKGDGTGRMSIYGEKFDDENFDLRHTGPGLLSSANSGPNTNGCQFFFTLAKAEWLDGKHTVFGKVLDPASMNVLRKVENVTVGTHNRPRLPVVVSQCGEL 185
[Close]
BLAST of mRNA_P-fluviatile_contig1.263.1 vs. uniprot
Match: A0A7S2BCB3_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BCB3_9STRA)

HSP 1 Score: 293 bits (749), Expect = 7.050e-94
Identity = 136/188 (72.34%), Postives = 157/188 (83.51%), Query Frame = 1 
Query:  223 DTMASPDPAVAEAVARGNPVVFFDVTIGGAPAGRIKMELFKDTCPKTAENFRRFCTGEHRHQGIPTGYKGAPFHRVIKDFMLQGGDFVKGDGTGRMSIYGEKFADENFDLRHTGPGLLSMANSGPNTNGCQFFVTTAKAAWLDGLHVVFGKVLDPASMLTVRKIENVSTGA-NNKPRLAIVIQECGEL 783
            D   S DPAVAEAV RGNPVVFFD+TIGG PAGRIKMELF D CP+TAENFR+FCTGE R    P GYK +PFHR+IK+FM+QGGDF+K DGTGRMSIYGE+F DENF+LRH+ PGLLSMANSGPNTNGCQFF+T AK  WLDG HVVFGKVLDPAS++ +RK ENV     +NKP+L +++ +CGEL
Sbjct:   13 DMALSADPAVAEAVERGNPVVFFDMTIGGVPAGRIKMELFADECPRTAENFRKFCTGEFRRSNHPVGYKDSPFHRIIKEFMIQGGDFLKQDGTGRMSIYGERFDDENFNLRHSAPGLLSMANSGPNTNGCQFFLTCAKCEWLDGKHVVFGKVLDPASLMVLRKCENVQVEPKSNKPKLPVIVAQCGEL 200
[Close]
BLAST of mRNA_P-fluviatile_contig1.263.1 vs. uniprot
Match: A0A067CUM4_SAPPC (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CUM4_SAPPC)

HSP 1 Score: 286 bits (733), Expect = 9.660e-92
Identity = 133/181 (73.48%), Postives = 153/181 (84.53%), Query Frame = 1 
Query:  241 DPAVAEAVARGNPVVFFDVTIGGAPAGRIKMELFKDTCPKTAENFRRFCTGEHRHQGIPTGYKGAPFHRVIKDFMLQGGDFVKGDGTGRMSIYGEKFADENFDLRHTGPGLLSMANSGPNTNGCQFFVTTAKAAWLDGLHVVFGKVLDPASMLTVRKIENVSTGANNKPRLAIVIQECGEL 783
            DPA++EAV RGNPVVFFDV +G AP GRIKMELFK  CPKT ENFR+FCTGE+R   +PTGYKG+ FHRVI DFM+QGGDF+KGDGTGRMSIYG+KFADE+F  +HT PGLLSMANSG +TNGCQFF+T A   WLDG HVVFGK+LDPAS+L +RKIE+V TGA NKP+  + I ECGEL
Sbjct:    2 DPALSEAVRRGNPVVFFDVALGNAPLGRIKMELFKRECPKTVENFRQFCTGEYRRGDMPTGYKGSHFHRVIPDFMIQGGDFLKGDGTGRMSIYGDKFADESFAYKHTEPGLLSMANSGVDTNGCQFFITCAPCDWLDGKHVVFGKLLDPASLLVMRKIESVQTGAANKPKTPVTITECGEL 182
[Close]
BLAST of mRNA_P-fluviatile_contig1.263.1 vs. uniprot
Match: K8YRK9_NANGC (Peptidyl-prolyl cis-trans isomerase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YRK9_NANGC)

HSP 1 Score: 286 bits (732), Expect = 1.190e-91
Identity = 136/181 (75.14%), Postives = 149/181 (82.32%), Query Frame = 1 
Query:  241 DPAVAEAVARGNPVVFFDVTIGGAPAGRIKMELFKDTCPKTAENFRRFCTGEHRHQGIPTGYKGAPFHRVIKDFMLQGGDFVKGDGTGRMSIYGEKFADENFDLRHTGPGLLSMANSGPNTNGCQFFVTTAKAAWLDGLHVVFGKVLDPASMLTVRKIENVSTGANNKPRLAIVIQECGEL 783
            D AV EAV RGNPVVF DV+I   PAGRIKMELFKD  PKT ENFR+FCTGE+R  G+P GYKG+PFHRVIKDFM+QGGDF+KGDG+G  SIYG+KFADENFDLRHTGPGLLSMANSGPNTNGCQFF+T  K  WLDG HVVFGKVLDPASMLTVRK+EN         RL + + ECGEL
Sbjct:    3 DSAVLEAVNRGNPVVFLDVSIANRPAGRIKMELFKDVVPKTVENFRQFCTGEYRESGLPLGYKGSPFHRVIKDFMIQGGDFMKGDGSGLKSIYGDKFADENFDLRHTGPGLLSMANSGPNTNGCQFFITCDKCEWLDGKHVVFGKVLDPASMLTVRKVENTDV-----KRLKVEVTECGEL 178
[Close]
BLAST of mRNA_P-fluviatile_contig1.263.1 vs. uniprot
Match: A0A7S2DPX7_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DPX7_9STRA)

HSP 1 Score: 285 bits (730), Expect = 3.360e-91
Identity = 133/184 (72.28%), Postives = 153/184 (83.15%), Query Frame = 1 
Query:  235 SPDPAVAEAVARGNPVVFFDVTIGGAPAGRIKMELFKDTCPKTAENFRRFCTGEHRHQGIPTGYKGAPFHRVIKDFMLQGGDFVKGDGTGRMSIYGEKFADENFDLRHTGPGLLSMANSGPNTNGCQFFVTTAKAAWLDGLHVVFGKVLDPASMLTVRKIENVSTGAN-NKPRLAIVIQECGEL 783
            S DPAV EAV RGNPVVFFD+TIGG PAGRIKMELF D CPKTAENFR+FCTGE R    P GYKG+PFHR+I++FM+Q GDF+K DGTGR+SIYGEKF DE+F LRH  PGLLSMANSGPNTNGCQFF+T A+  WLDG HVVFGKVLDPAS++ +RKIENV      +KP+L ++I +CGEL
Sbjct:    5 SADPAVLEAVERGNPVVFFDITIGGVPAGRIKMELFADECPKTAENFRQFCTGEFRRANHPVGYKGSPFHRIIREFMIQAGDFLKQDGTGRISIYGEKFEDESFSLRHNEPGLLSMANSGPNTNGCQFFLTCARCEWLDGKHVVFGKVLDPASLMVLRKIENVQVDPKTSKPKLPVLIAQCGEL 188
[Close]
BLAST of mRNA_P-fluviatile_contig1.263.1 vs. uniprot
Match: A0A485LRW0_9STRA (Peptidyl-prolyl cis-trans isomerase n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A485LRW0_9STRA)

HSP 1 Score: 285 bits (729), Expect = 3.860e-91
Identity = 132/181 (72.93%), Postives = 151/181 (83.43%), Query Frame = 1 
Query:  241 DPAVAEAVARGNPVVFFDVTIGGAPAGRIKMELFKDTCPKTAENFRRFCTGEHRHQGIPTGYKGAPFHRVIKDFMLQGGDFVKGDGTGRMSIYGEKFADENFDLRHTGPGLLSMANSGPNTNGCQFFVTTAKAAWLDGLHVVFGKVLDPASMLTVRKIENVSTGANNKPRLAIVIQECGEL 783
            DP +AEA+ +GN VVFFDV +GGAP GRI+MELFK+ CPKT ENFR+FCTGE+R   +P GYK + FHRVIKDFM+QGGDF+KGDGTGRMSIYG+KFADEN  LRHT  GLLSMANSGP TNGCQFF+T     WLDG HVVFGK+LD AS+L +RKIE+V TGANNKPR  +VI ECGEL
Sbjct:    2 DPLLAEALRKGNVVVFFDVALGGAPLGRIRMELFKNECPKTVENFRQFCTGEYRRNELPVGYKASTFHRVIKDFMVQGGDFLKGDGTGRMSIYGDKFADENLTLRHTEAGLLSMANSGPGTNGCQFFITCGPCDWLDGKHVVFGKLLDSASLLVMRKIESVPTGANNKPRTPVVITECGEL 182
[Close]
BLAST of mRNA_P-fluviatile_contig1.263.1 vs. uniprot
Match: A0A482RTU9_9ARCH (Peptidylprolyl isomerase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RTU9_9ARCH)

HSP 1 Score: 282 bits (721), Expect = 6.150e-90
Identity = 128/181 (70.72%), Postives = 149/181 (82.32%), Query Frame = 1 
Query:  241 DPAVAEAVARGNPVVFFDVTIGGAPAGRIKMELFKDTCPKTAENFRRFCTGEHRHQGIPTGYKGAPFHRVIKDFMLQGGDFVKGDGTGRMSIYGEKFADENFDLRHTGPGLLSMANSGPNTNGCQFFVTTAKAAWLDGLHVVFGKVLDPASMLTVRKIENVSTGANNKPRLAIVIQECGEL 783
            DP ++ A+ RGNPVVFFDV+IGG  AGRI++ELF D CPKTAENFR+FC GE+R   +P GYK  PFHRVIK FM+QGGDF +GDGTG++SIYG  F DENF LRHTG GLLSMANSGPNTNGCQFF+T  K  WLDG HVVFGKVLD AS+L VRKIENV +G N+KP+L + I++CGEL
Sbjct:    2 DPTLSAAIERGNPVVFFDVSIGGVAAGRIRIELFADVCPKTAENFRQFCCGEYRRNTLPVGYKACPFHRVIKGFMIQGGDFERGDGTGKLSIYGSSFPDENFVLRHTGAGLLSMANSGPNTNGCQFFITCGKCDWLDGKHVVFGKVLDDASLLVVRKIENVPSGPNDKPKLPVTIEQCGEL 182
[Close]
BLAST of mRNA_P-fluviatile_contig1.263.1 vs. uniprot
Match: A0A7S3RA41_DUNTE (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3RA41_DUNTE)

HSP 1 Score: 278 bits (712), Expect = 1.380e-88
Identity = 127/169 (75.15%), Postives = 143/169 (84.62%), Query Frame = 1 
Query:  274 NPVVFFDVTIGGAPAGRIKMELFKDTCPKTAENFRRFCTGEHRHQGIPTGYKGAPFHRVIKDFMLQGGDFVKGDGTGRMSIYGEKFADENFDLRHTGPGLLSMANSGPNTNGCQFFVTTAKAAWLDGLHVVFGKVLDPASMLTVRKIENVSTGANNKPRLAIVIQECGE 780
            NPVVFFDVTIGG PAGRIKMELF D CPKT ENFR+FCTGEHR QG+P GYKG+ FHRVIK+FM+QGGDF+KGDGTG  SIYG +FADENF  +HTGPGLLSMANSGPN+NGCQFF+T AK  W+D  HVVFG+V++   ML VRKIENV+TG NNKP L  +I ECGE
Sbjct:   14 NPVVFFDVTIGGMPAGRIKMELFADVCPKTCENFRQFCTGEHRRQGLPVGYKGSSFHRVIKEFMIQGGDFLKGDGTGSTSIYGSRFADENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKTDWIDNKHVVFGRVIEDG-MLVVRKIENVATGKNNKPNLPCIITECGE 181
[Close]
BLAST of mRNA_P-fluviatile_contig1.263.1 vs. uniprot
Match: A0A2D4C495_PYTIN (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C495_PYTIN)

HSP 1 Score: 278 bits (711), Expect = 1.960e-88
Identity = 128/181 (70.72%), Postives = 150/181 (82.87%), Query Frame = 1 
Query:  241 DPAVAEAVARGNPVVFFDVTIGGAPAGRIKMELFKDTCPKTAENFRRFCTGEHRHQGIPTGYKGAPFHRVIKDFMLQGGDFVKGDGTGRMSIYGEKFADENFDLRHTGPGLLSMANSGPNTNGCQFFVTTAKAAWLDGLHVVFGKVLDPASMLTVRKIENVSTGANNKPRLAIVIQECGEL 783
            DP + EA+ RGNPVVF D  IGGAPAGR+K+ELFK  CPKT ENFR+FCTGE+R   +P GYK   FHRVIKDFM+QGGDF+KGDGTGRMSIYG+KF DENF  +HT  GLLSMANSGPN+NGCQFF+T A   WLDG HVVFGK+LDPAS+L +RK+E+V  G+N+KP+L+I I ECGEL
Sbjct:    2 DPLLNEALKRGNPVVFLDXAIGGAPAGRLKLELFKKDCPKTVENFRQFCTGEYRKSDLPVGYKACTFHRVIKDFMVQGGDFLKGDGTGRMSIYGDKFPDENFLHKHTEAGLLSMANSGPNSNGCQFFITCAPCEWLDGKHVVFGKLLDPASLLLLRKMESVPVGSNSKPKLSISITECGEL 182
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.263.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLJ7_ECTSI2.230e-12897.84Peptidyl-prolyl cis-trans isomerase n=1 Tax=Ectoca... [more]
A0A835Z972_9STRA3.510e-10177.84Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tribon... [more]
A0A7S2BCB3_9STRA7.050e-9472.34Peptidyl-prolyl cis-trans isomerase n=1 Tax=Floren... [more]
A0A067CUM4_SAPPC9.660e-9273.48Peptidyl-prolyl cis-trans isomerase n=2 Tax=Saprol... [more]
K8YRK9_NANGC1.190e-9175.14Peptidyl-prolyl cis-trans isomerase n=3 Tax=Monodo... [more]
A0A7S2DPX7_9STRA3.360e-9172.28Peptidyl-prolyl cis-trans isomerase n=1 Tax=Dictyo... [more]
A0A485LRW0_9STRA3.860e-9172.93Peptidyl-prolyl cis-trans isomerase n=5 Tax=Aphano... [more]
A0A482RTU9_9ARCH6.150e-9070.72Peptidylprolyl isomerase n=1 Tax=archaeon TaxID=19... [more]
A0A7S3RA41_DUNTE1.380e-8875.15Peptidyl-prolyl cis-trans isomerase n=1 Tax=Dunali... [more]
A0A2D4C495_PYTIN1.960e-8870.72Peptidyl-prolyl cis-trans isomerase n=1 Tax=Pythiu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:3227367..3230999 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score382.9
Seed ortholog evalue8.7e-104
Seed eggNOG ortholog2880.D8LLJ7
Preferred namePPIH
KEGG koko:K09567
KEGG Pathwayko03040,map03040
KEGG ModuleM00354
GOsGO:0000375,GO:0000377,GO:0000398,GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005737,GO:0006139,GO:0006396,GO:0006397,GO:0006457,GO:0006464,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0016018,GO:0016043,GO:0016070,GO:0016071,GO:0016604,GO:0016607,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0022607,GO:0030532,GO:0031974,GO:0031981,GO:0032991,GO:0033218,GO:0034641,GO:0036211,GO:0042277,GO:0043021,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043900,GO:0043902,GO:0043903,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0044877,GO:0045069,GO:0045070,GO:0045292,GO:0046483,GO:0046540,GO:0048518,GO:0048524,GO:0050789,GO:0050792,GO:0065003,GO:0065007,GO:0070013,GO:0071001,GO:0071704,GO:0071840,GO:0090304,GO:0097525,GO:0097526,GO:0120114,GO:0140096,GO:1901360,GO:1901564,GO:1903900,GO:1903902,GO:1990904
EggNOG free text desc.peptidyl-prolyl cis-trans isomerase activity
EggNOG OGsCOG0652@1,KOG0879@2759
EC5.2.1.8
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03041,ko03110
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionCyclophilin-type peptidyl-prolyl cis-trans isomerase
Ec32 orthologEc-04_005600.1
Exons5
Model size1542
Cds size558
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815313.9342885-UTR-P-fluviatile_contig1:3227366..32281221622815313.9342885-UTR-P-fluviatile_contig1:3227366..3228122Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 3227367..3228122 -
1693561474.1701043-UTR-P-fluviatile_contig1:3227366..32281221693561474.1701043-UTR-P-fluviatile_contig1:3227366..3228122Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 3227367..3228122 -
1622815314.0118303-UTR-P-fluviatile_contig1:3230771..32309991622815314.0118303-UTR-P-fluviatile_contig1:3230771..3230999Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 3230772..3230999 -
1693561474.2463696-UTR-P-fluviatile_contig1:3230771..32309991693561474.2463696-UTR-P-fluviatile_contig1:3230771..3230999Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 3230772..3230999 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815313.946405-CDS-P-fluviatile_contig1:3228122..32282331622815313.946405-CDS-P-fluviatile_contig1:3228122..3228233Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3228123..3228233 -
1693561474.1883476-CDS-P-fluviatile_contig1:3228122..32282331693561474.1883476-CDS-P-fluviatile_contig1:3228122..3228233Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3228123..3228233 -
1622815313.9572103-CDS-P-fluviatile_contig1:3228456..32285691622815313.9572103-CDS-P-fluviatile_contig1:3228456..3228569Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3228457..3228569 -
1693561474.2027223-CDS-P-fluviatile_contig1:3228456..32285691693561474.2027223-CDS-P-fluviatile_contig1:3228456..3228569Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3228457..3228569 -
1622815313.9704778-CDS-P-fluviatile_contig1:3228938..32290921622815313.9704778-CDS-P-fluviatile_contig1:3228938..3229092Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3228939..3229092 -
1693561474.2133598-CDS-P-fluviatile_contig1:3228938..32290921693561474.2133598-CDS-P-fluviatile_contig1:3228938..3229092Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3228939..3229092 -
1622815313.9879262-CDS-P-fluviatile_contig1:3229767..32299171622815313.9879262-CDS-P-fluviatile_contig1:3229767..3229917Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3229768..3229917 -
1693561474.2227366-CDS-P-fluviatile_contig1:3229767..32299171693561474.2227366-CDS-P-fluviatile_contig1:3229767..3229917Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3229768..3229917 -
1622815313.9997172-CDS-P-fluviatile_contig1:3230741..32307711622815313.9997172-CDS-P-fluviatile_contig1:3230741..3230771Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3230742..3230771 -
1693561474.2350051-CDS-P-fluviatile_contig1:3230741..32307711693561474.2350051-CDS-P-fluviatile_contig1:3230741..3230771Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3230742..3230771 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.263.1prot_P-fluviatile_contig1.263.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig1 3228123..3230771 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig1.263.1

>prot_P-fluviatile_contig1.263.1 ID=prot_P-fluviatile_contig1.263.1|Name=mRNA_P-fluviatile_contig1.263.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=186bp
MASPDPAVAEAVARGNPVVFFDVTIGGAPAGRIKMELFKDTCPKTAENFR
RFCTGEHRHQGIPTGYKGAPFHRVIKDFMLQGGDFVKGDGTGRMSIYGEK
FADENFDLRHTGPGLLSMANSGPNTNGCQFFVTTAKAAWLDGLHVVFGKV
LDPASMLTVRKIENVSTGANNKPRLAIVIQECGEL*
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mRNA from alignment at P-fluviatile_contig1:3227367..3230999-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig1.263.1 ID=mRNA_P-fluviatile_contig1.263.1|Name=mRNA_P-fluviatile_contig1.263.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3633bp|location=Sequence derived from alignment at P-fluviatile_contig1:3227367..3230999- (Porterinema fluviatile SAG_2381)
AGCGACGACCTAGGCCTAGGCCGGCGACGTCTGGTCTAACTTGTCCCTCT
CACAACTGCTGCTAAATCCTGCGCCGGCATTTAAAAGCAAATCAACGACA
GACCCTCCTCAGGGACTTTGAATTTTGCGGTGCATTGCAAGCGGCAACGA
TCCTAGCTGCAAGAGCAACGATCCCCGTATCCAGCGCCATTGCGGGGTTG
CTTGGAGATCGCGGCGGCGGGCGACACAATGGCTTCCCCTGACCCGGCCG
TCGCCGAGGTGAGTGTGGGCTATGCGCGTGATAACGTCGCTGTTGTATGA
AATATTTTCTCTGCGAGTTCAGCGTGCCGGTGGGATTTGTGTGATCTCTT
CCACCTGCTGGTAACACACCTGAAGCCCACTTTGTCCATTCAGCATACTT
TTTGAAACCCTTATCAGTGGTGAGCGCGCTGCGAAGCTCCGAGCGCTGAA
CCTGTTTCGGACATCAAAACTTAACAAGACAGGAGTTTTTCCAGGCTTCT
CTTCTCGCTCGTCGGTCGCGGGTGGATGTTCGCTCTCCGTGTACGTTATG
GCAGTAGCTCACTTGTTCCAGTTCGCGAGTGTGTTGAGAACTGGGTCCAT
GCGGCAGCCGGCGGGGTAATCGTCGAGGAGTTGGTGGTCAGTTGGTTGGC
AGCTTACGTATTATCAATGTGCAGCATCGACGGGCAATCATTAATCGGCG
TAGCACTCAACCAACCGGCCGCTGTCATCTGCTGGAATCGTCCCGCGCGG
ACGACGAGATGTTCGTTCATGACACACGCGGGGGTCGGATAATGCCGGTA
CGGAACGGAGAGATTGAGTACTTCTTGGTGAAGTCGATCAGTGAGTTTAA
AATCGTGTTTGGCAAAGGGCCTGGGTGTGCGATACTTATCATGTTCGTGG
TTTCGTTTCTTGGAACTTGCCGGCAAGTTTGGACCGTCATCGTTGTTCGC
CCTTTCGCCCCCTCTCGACGTCAGTGTCCGGTCTGGCTCTTCTCATCTCA
TGTCTCTCCCTTCGCTCTGTGTCTCTCCTCGTCGCCCTGTTGGTACTCAT
GTCTGCCTGTGCAACACACCGAACTAATGCAGGCCGTCGCGCGTGGTAAT
CCCGTGGTGTTTTTCGACGTGACCATCGGAGGGGCGCCGGCGGGGCGCAT
CAAGATGGAGCTCTTCAAGGACACCTGTCCCAAAACCGCAGAAAATTTCA
GGCGCTTCTGTACCGGCGAACACCGGCATCAGGTCAGTCAACTGTCGGCA
CCCCGGTCGTCCCGACCCAAGACGCCGACGTATGTCGGTACACGGGACGC
TTTTCCCGCCCTTTGGCGACAGACCACGCGGTCCCAGCTGTCCCTCACGT
CGACGTAAAGCAAGGCGTCGCCGACGCGCTACCAATTCGCGCGAGAAGAG
ATTCCGAGCAGGGTAAACTGGGAGGAAAGAGCGACGGCGCAGCGGTCACA
AGCCACAACTGCAGCAGGCCAGGCCAGCCGGGCCCTCGTTTTTGTGTCGC
GAGAGAGCTTCGGTTTCGAACTGACCGCGGGTGTTACAAATGCCGCACCG
CGGCTCCGCCGAAAACGCCGCGTCGGCTCGCTGCCGCCTCGGAAAACGTC
TCGCTACTTATCGCGTTTCCCCCCTCTGCCCCTCTTCACGTCTCCGTGCT
ACGAAGGAGAGCACTCGCGTGCCTTTCTTTGGCCCTAGATTTCCCACACG
CAATTTTTTCCGGCTCAGTTTCTTGTTTGCTGCGAGGGTGTTTTTCGACC
CAAGCTGTTGCTGCCCTGCTGCTGCTGCTGCTGTTGTTGTTGTTGTTGCT
GTTGCTGCTCCTGCTGCTGCTCCTGCTCGTATTATGATCGCGGAGGTGTT
GAGTATTTCGACGTTTTGGGGGCATTTGGTTTCGGTCGTTTTGTGTGGCC
GCGGCAGGGCATTCCGACGGGTTACAAGGGCGCGCCTTTCCACCGCGTGA
TCAAGGATTTCATGCTCCAGGGGGGAGACTTCGTGAAGGGAGACGGTACA
GGCAGAATGAGCATCTACGGGGAGAAGTTCGCGGACGAAAACTTCGACCT
TCGTCACACAGGTGAAAACTGGAACGAAAAGTATGCTGTTGCTAGTGCAT
GTCTTCTGCGGGCACGAAGGCCCGGCTCTCTCAAACGCGAGGAAATCGTG
CCGCGATATGAAACACTCGCTGGGGGGCAACTCGACCCGAATGCGATCAA
CAAATCTCTTGCCTCTTTGCGCCTCTTGACCTTCCTTTGTTATTTGCTTC
GACCTTATGGGGGGGGTGCTCGCGTGTCCTCTTGCGCGCGAGGCTCTCCT
TTTCACGCCGGTTTGCACTTCGTCTCCGCCTTGGTCATTTATGTCGTACG
TTCTCGCCGCTGTGTTTTTTGCGGCAAGTGAAGCCCATCCATCGTCCGTC
CCCCTCTCGCCCCCCTTCGTGTTCTGCCAGGCCCGGGGCTTCTTTCCATG
GCAAATAGCGGGCCGAACACGAACGGCTGCCAGTTTTTCGTGACGACGGC
GAAGGCAGCTTGGCTTGACGGTCTCCACGTTGTGTTCGGGAAGGTGAGTG
AAAGACGCTACAGCCCCGTCGGCGGGTAGATTGACGAAGACGAAGACTGT
TCAGTAAATTGCCACTCGCGAGGTCCTCCAGCAGCTTCCGCACCCCTTCG
CTTGTTTCGACTTGAGGGCGGGGGGGGGGGGGAGGGTTACTGTTCAGGAT
GTGGGAATGCTACGATTGGAAGGTAACACCTCCTTCGACAACACCACCAA
CTTGTCGACCGCGTAGGTATTGGATCCGGCGTCCATGCTGACTGTTCGGA
AAATCGAGAACGTCTCCACCGGGGCGAACAACAAGCCTCGGCTCGCCATC
GTCATCCAGGAATGCGGCGAGCTCTGACTGCCCGCGGCGGCCGGCGCAGA
TCAAGCGCGGCGGGAGACCGAGCGCCCCCCTTGCCCCGCCTCCCTGGGAA
TTCGTCGAGCCATATGACGAATAGAAATAATTGGGAAGACTGCATCGTCA
CTCACCGAGAATGTTTGGTGCCACGCATTGGTTGACGCGTACTTCGTTAC
CATCGCCCGTACGTGGTGAGGAACGACGATGGACGTCGTTGAGAATTTGC
AGGGTTGCGTCTCGGTGATGATTCGCCAAAACGAGGAGGGACACAAGCAA
TATCCACGCAGCACGGGTTGTGTTATCCGTGGAGTGAGTGGTCGATTCAC
CGGGGGGCGGGCTCCAAAGCTGTATCTTGAGCGTCCGATCAACTCCGTGC
GGCTCGACCGCAGGGTCGCTCATGTTGTTCATCAAGGAGGTGCATGCCGT
CAATTTGGGGACGATTTTTGTTGTGTCCACGACACGAGGAGCAAAACACA
AGAGCACGCGTTCTTTCCATTTTTCGAGAACGGGACTCGTTGGACCACCC
TGTTGCGATGACGGCCACTGCATTGGCCGTCTAGGACGACACCTCTGGTT
CGTGACTTCAAACTTTTCGTATCGGATTTGCATGTTGTCTGACTTGGGCG
CCGAGCCAAACGTTGCACTCTATGAAACCTCCGGTGTTGTTTGCACTCTC
CACGTCTGCCGCGGGATTATCGGATGTTGGCACAGTAGCCCATCGCTTGT
CGCCGCCATTACATCTTCGAACGCAGTCTCAGT
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Coding sequence (CDS) from alignment at P-fluviatile_contig1:3227367..3230999-

>mRNA_P-fluviatile_contig1.263.1 ID=mRNA_P-fluviatile_contig1.263.1|Name=mRNA_P-fluviatile_contig1.263.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1116bp|location=Sequence derived from alignment at P-fluviatile_contig1:3227367..3230999- (Porterinema fluviatile SAG_2381)
ATGGCTTCCCCTGACCCGGCCGTCGCCGAGATGGCTTCCCCTGACCCGGC
CGTCGCCGAGGCCGTCGCGCGTGGTAATCCCGTGGTGTTTTTCGACGTGA
CCATCGGAGGGGCGCCGGCGGGGCGCATCAAGATGGAGCTCTTCAAGGAC
ACCTGTCCCAAAACCGCAGAAAATTTCAGGCGCTTCTGTACCGGCGAACA
CCGGCATCAGGCCGTCGCGCGTGGTAATCCCGTGGTGTTTTTCGACGTGA
CCATCGGAGGGGCGCCGGCGGGGCGCATCAAGATGGAGCTCTTCAAGGAC
ACCTGTCCCAAAACCGCAGAAAATTTCAGGCGCTTCTGTACCGGCGAACA
CCGGCATCAGGGCATTCCGACGGGTTACAAGGGCGCGCCTTTCCACCGCG
TGATCAAGGATTTCATGCTCCAGGGGGGAGACTTCGTGAAGGGAGACGGT
ACAGGCAGAATGAGCATCTACGGGGAGAAGTTCGCGGACGAAAACTTCGA
CCTTCGTCACACAGGGCATTCCGACGGGTTACAAGGGCGCGCCTTTCCAC
CGCGTGATCAAGGATTTCATGCTCCAGGGGGGAGACTTCGTGAAGGGAGA
CGGTACAGGCAGAATGAGCATCTACGGGGAGAAGTTCGCGGACGAAAACT
TCGACCTTCGTCACACAGGCCCGGGGCTTCTTTCCATGGCAAATAGCGGG
CCGAACACGAACGGCTGCCAGTTTTTCGTGACGACGGCGAAGGCAGCTTG
GCTTGACGGTCTCCACGTTGTGTTCGGGAAGGCCCGGGGCTTCTTTCCAT
GGCAAATAGCGGGCCGAACACGAACGGCTGCCAGTTTTTCGTGACGACGG
CGAAGGCAGCTTGGCTTGACGGTCTCCACGTTGTGTTCGGGAAGGTATTG
GATCCGGCGTCCATGCTGACTGTTCGGAAAATCGAGAACGTCTCCACCGG
GGCGAACAACAAGCCTCGGCTCGCCATCGTCATCCAGGAATGCGGCGAGC
TCTGAGTATTGGATCCGGCGTCCATGCTGACTGTTCGGAAAATCGAGAAC
GTCTCCACCGGGGCGAACAACAAGCCTCGGCTCGCCATCGTCATCCAGGA
ATGCGGCGAGCTCTGA
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