mRNA_P-fluviatile_contig1.257.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig1.257.1
Unique NamemRNA_P-fluviatile_contig1.257.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig1.257.1 vs. uniprot
Match: A0A6H5KT75_9PHAE (PAO protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KT75_9PHAE)

HSP 1 Score: 604 bits (1558), Expect = 8.190e-203
Identity = 357/640 (55.78%), Postives = 410/640 (64.06%), Query Frame = 3 
Query:  300 MRTRRHRT---GVMLDHGAAYIHGIDGNPLAELAKEAGIGLKQVSESNPWLETTPSVSFCHRGELADESEATATHEAYCELMGRIRMLARGCDDANVPAGDAVEKLLLDEPFRSLPVPELSRLRLRLASLALWHGCDMQDMQLRSLDFEDKPFHGGQGVYGDFPGPHCVVEGGVERVAEAVASPEVWECLRLNSPVDRIALVDRDMVAKGGGVLVSIRREVTATTAIAAEAAAAPAVVEGGR-----------------GEDERKRELVRADAVIVTVPLSVLQSGELEFDPPLAEETAAALSRLSMGTYEKIIMEFEEPFWPADAPFIGCXXXXXXXXXXXXXXXXXXXXXXXXT--VSAVV-------AAPAX--------TATAATDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAAGHYSCSPLPAIPIFLENYLWLKGVPVLTAAVTGERARILSASXXXXXXXXXXXXXXXGGEGVGETG----GWRAAHAREMYHRMIKPALVQGLCGEEAEVPEPVSVFVTSWAEEPFQRGSYSFFPLGARDDDIHKVGQGAAYGLPLGAEVKSGPGGVPGGDAPGAERVFFAGEATVPGLEGSMHGAYLSGVRAVEDVAHALGL 2096
            MRTRRH T   G+  DHGAAYIHG  GNPL +LAK AGIGLKQVSESNPW+E TPSVS  + G+ A E+E  A  EA+ ELMGR+R +A+GCDDA  PA DA+EKLLLDEPFRS  +PEL+RLR+R+  LALWHGCD+QDMQLRSL+FE+KPFHGGQGVYGDFPGPHCVVEGGVER+AE VASP+V ECLRLN+ V R+A+VD +  A    +  +             + +  PA V  G                          LVRA+AVIV VPLSVLQ G +EFDPPL+EET++ALSRLSMG YEKI+MEF EPFWPAD PFIGC                        T  VSA         A PA         +A    D                               XXXXXXXXXXXXX  +      PL   P+FLEN+LW KGVPVLTAAVTGERAR++SA+                GEG G +G    GWRA+HAREMY R+IKPALV+GL G   ++PEPVSVFVTSW +EPFQRGSYSFFPLGARDDDIH  G+GAA+G P GA  + G GG       G+ERVFFAGEATVPGLEGSMHGAYLSGVRA EDVA+A GL
Sbjct:    1 MRTRRHGTAGGGLCFDHGAAYIHGTLGNPLVDLAKGAGIGLKQVSESNPWIEATPSVSLFYGGKRAGEAETAANDEAFSELMGRVRTMAQGCDDAEAPARDAIEKLLLDEPFRSFSMPELARLRMRVLMLALWHGCDVQDMQLRSLEFENKPFHGGQGVYGDFPGPHCVVEGGVERIAEVVASPQVRECLRLNARVSRVAIVDAEKAAAAAAIPAN-------------KTSGGPAAVSKGEHVQVVVHKQVVGXXXXXXXXXXXXXLVRAEAVIVAVPLSVLQEGTVEFDPPLSEETSSALSRLSMGNYEKIMMEFAEPFWPADTPFIGCCCGYPRPPPSPPSLHTAPPAAPVPTAPVSATADGGSYSPAPPAPRPRTTVSGSARMTADGGGVAPPSSSGATNPASLVAAENGHTPALAAXXXXXXXXXXXXXXESAVVGAPPLSVSPVFLENHLWSKGVPVLTAAVTGERARMVSAAARTMAR----------GEGAGNSGAAEEGWRASHAREMYRRLIKPALVEGLGGTGEDLPEPVSVFVTSWGQEPFQRGSYSFFPLGARDDDIHTAGRGAAFGPPRGA-AEGGAGG-------GSERVFFAGEATVPGLEGSMHGAYLSGVRAAEDVAYAFGL 609
[Close]
BLAST of mRNA_P-fluviatile_contig1.257.1 vs. uniprot
Match: A0A6A4F487_9STRA (Amine oxidase n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A4F487_9STRA)

HSP 1 Score: 150 bits (379), Expect = 6.630e-35
Identity = 123/371 (33.15%), Postives = 177/371 (47.71%), Query Frame = 3 
Query:  153 DTPPPKSFPKVVVVGAGMAGLSATRELLRRG-WPARKVVLVEASGKIGGRMRTRRHRTG--VMLDHGAAYIHGIDGNPLAELAKEAGIGLKQVSESNPWLETTPSVSFC-HRGELADESEATATHEAYCEL-MGRIRMLAR---GCDDANVPAGDAVEKLLLDEPFRSLPV----PELSRLRLRLASLALWHGCDMQDMQLRSLDFEDKPFHGGQGVYGDFPGPHCVVEGGVERVAEAVASPEVWECLRLNSPVDRIALVDRDMVAKGGGVLVSIRREVTATTAIAAEAAAAPAVVEGGRGEDERKRELVRADAVIVTVPLSVLQSGELEFDPPLAEETAAALSRLSMGTYEKIIMEFEEPFWPADAPFIG 1229
            +TP   S+ +VVV+GAG+AG+SA  ELL  G +    V ++EA  +IGGR++T+       V ++ GAA+IHG +GNP A LAK+ GI  K++S  NPWL      +F    G      + TA   A+ +L M +++ LAR   G +  +      VE LL D     L V       +++ L L  +  W G  ++D+ L      D        + GD PG HC+V  G+ER  + +A P + + +  N  V  I     D      GV++                             D R+   V AD VIV   L +LQSG+L F P L      AL R  MG Y K++++F E FWP DA F+G
Sbjct:   10 ETPLEASY-RVVVIGAGLAGVSAANELLSSGHFDTSDVCVLEAQTRIGGRVQTKSFSDSLPVNVEVGAAWIHGTEGNPFAALAKQFGISFKEISPRNPWLHPGSCSNFLLFDGSRQLSDQQTAETWAWQDLLMRKLQQLARSDHGHEHRDKTLSAVVEHLL-DSDRELLEVMGGVKARAKIELFLRLMEAWFGLTVEDLNLDVFVETD--------LMGDDPGAHCIVPPGMERFIDHLAEP-LHDVIHTNVSVASINYDGPD------GVIIECN--------------------------DGRR---VTADRVIVATSLGLLQSGKLHFQPELPAVKTGALKRSKMGQYMKVLVQFPEVFWPKDATFMG 334
[Close]
BLAST of mRNA_P-fluviatile_contig1.257.1 vs. uniprot
Match: A0A6A3ME88_9STRA (Amine oxidase n=9 Tax=Phytophthora TaxID=4783 RepID=A0A6A3ME88_9STRA)

HSP 1 Score: 152 bits (383), Expect = 5.800e-34
Identity = 123/371 (33.15%), Postives = 178/371 (47.98%), Query Frame = 3 
Query:  153 DTPPPKSFPKVVVVGAGMAGLSATRELLRRG-WPARKVVLVEASGKIGGRMRTRRHRTG--VMLDHGAAYIHGIDGNPLAELAKEAGIGLKQVSESNPWLETTPSVSFC-HRGELADESEATATHEAYCEL-MGRIRMLAR---GCDDANVPAGDAVEKLLLDEPFRSLPV----PELSRLRLRLASLALWHGCDMQDMQLRSLDFEDKPFHGGQGVYGDFPGPHCVVEGGVERVAEAVASPEVWECLRLNSPVDRIALVDRDMVAKGGGVLVSIRREVTATTAIAAEAAAAPAVVEGGRGEDERKRELVRADAVIVTVPLSVLQSGELEFDPPLAEETAAALSRLSMGTYEKIIMEFEEPFWPADAPFIG 1229
            +TP   S+ +VVV+GAG+AG+SA  ELL  G +    V ++EA  +IGGR++T+       V ++ GAA+IHG +GNP A LAK+ GI  K++S  NPWL      +F    G     ++ TA   A+ +L M +++ LAR   G +  +      VE LL D     L V       +++ L L  +  W G  ++D+ L      D        + GD PG HC+V  G+ER  + +A P + + +  N  V  I     D      GV++                             D R+   V AD VIV   L +LQSG+L F P L      AL R  MG Y K++++F E FWP DA F+G
Sbjct:   10 ETPLEASY-RVVVIGAGLAGVSAANELLSSGHFDTSDVCVLEAQTRIGGRVQTKSFSDSLPVNVEVGAAWIHGTEGNPFAALAKQFGISFKEISPRNPWLHPGSCSNFLLFDGSRQLSNQQTAETWAWQDLLMRKLQQLARSDHGHEHRDKTLSAVVEHLL-DSDRELLEVMGGVKARAKIELFLRLMEAWFGLTVEDLNLDVFVETD--------LMGDDPGAHCIVPAGMERFIDHLAEP-LQDVIHTNVSVASINYDGAD------GVIIECN--------------------------DGRR---VTADRVIVATSLGLLQSGKLHFQPELPAVKTGALKRSKMGQYMKVLVQFPEVFWPKDATFMG 334
[Close]
BLAST of mRNA_P-fluviatile_contig1.257.1 vs. uniprot
Match: A0A421H084_9STRA (Amine oxidase n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421H084_9STRA)

HSP 1 Score: 146 bits (368), Expect = 1.690e-33
Identity = 123/366 (33.61%), Postives = 174/366 (47.54%), Query Frame = 3 
Query:  180 KVVVVGAGMAGLSATRELLRRG-WPARKVVLVEASGKIGGRMRTRRHRTG--VMLDHGAAYIHGIDGNPLAELAKEAGIGLKQVSESNPWL--ETTPSVSFCHRG------ELADESEATATHEAYCELMGRIRMLARGCD--DANVPAGDAVEKLLLDEPFRSLPVPELSRLRLRLAS----LALWHGCDMQDMQLRSLDFEDKPFHGGQGVYGDFPGPHCVVEGGVERVAEAVASPEVWECLRLNSPVDRIALVDRDMVAKGGGVLVSIRREVTATTAIAAEAAAAPAVVEGGRGEDERKRELVRADAVIVTVPLSVLQSGELEFDPPLAEETAAALSRLSMGTYEKIIMEFEEPFWPADAPFI 1226
            +V+V+G+G++GLSA   LL    +   +V ++EA  +IGGR++T+       V+++ GAA+IHG DG+P +E+A++ GI  K+VS  NPWL  E+ P+  F + G      EL DE     T E    LM +++ LA   D  D    A  A+   L+D         E    R RL      + +W G    D+QL   DF +        + GD PGPHC+V  G+ER  E +A P V + +  N  V  I          G  +  S  R+VT                               AD VIVT  L +L+SG+L F P L  E   A+ R  MG Y KI++EF   FWP +A FI
Sbjct:   14 RVIVIGSGLSGLSAANALLTSTEFTPDQVCILEAQSRIGGRIQTKHFSDSLPVIVESGAAWIHGTDGHPFSEMARQFGIAFKEVSPRNPWLHPESCPNF-FIYEGRNQLAKELVDE-----TWEWQDLLMHKLQALATSEDATDHQEVALSAIVNRLVDSDAELQAAMEAPNARARLGICLRLVEVWMGATDDDLQLD--DFVEIE------LIGDDPGPHCIVPAGMERFIEELAKP-VEDSIHTNVCVTSINYEG----PTGVEITCSDGRQVT-------------------------------ADHVIVTSSLGLLKSGKLTFQPELPVEKLDAIKRSKMGQYMKILVEFPVVFWPEEATFI 329
[Close]
BLAST of mRNA_P-fluviatile_contig1.257.1 vs. uniprot
Match: V9F1M3_PHYPR (Amine oxidase n=11 Tax=Phytophthora TaxID=4783 RepID=V9F1M3_PHYPR)

HSP 1 Score: 145 bits (366), Expect = 3.070e-33
Identity = 117/361 (32.41%), Postives = 168/361 (46.54%), Query Frame = 3 
Query:  180 KVVVVGAGMAGLSATRELLRRG-WPARKVVLVEASGKIGGRMRTRRHRTG--VMLDHGAAYIHGIDGNPLAELAKEAGIGLKQVSESNPWLE--TTPSVSFCHRGELADESEATATHEAYCELMGRIRMLAR---GCDDANVPAGDAVEKLLL-DEPFRSLPVPELSRLR--LRLASLALWHGCDMQDMQLRSLDFEDKPFHGGQGVYGDFPGPHCVVEGGVERVAEAVASPEVWECLRLNSPVDRIALVDRDMVAKGGGVLVSIRREVTATTAIAAEAAAAPAVVEGGRGEDERKRELVRADAVIVTVPLSVLQSGELEFDPPLAEETAAALSRLSMGTYEKIIMEFEEPFWPADAPFIG 1229
            +VVV+GAG+AG+SA  +LL  G + +  V ++EA  +IGGR++ +       V ++ GAA+IHG +GNP A LAK+ GI  K++S  NPWL   + P+    +      E       E    LM +++ LAR   G D         VE LL+ D     +     +R R  L L  +  W G    D+ L      D        + GD PG HC+V  G+ER  E +A P + + +  N  V   A ++ D      GV++                             D R+   V AD VIV   L +LQSG+L F P L +    AL R  MG Y K++++F E FWP  A F+G
Sbjct:   18 RVVVIGAGLAGVSAANQLLSSGHFDSSDVCVLEAQSRIGGRVQAKSFSDALPVNVEVGAAWIHGTEGNPFAALAKQFGISFKEISPRNPWLHPGSCPNFLLFNGSHQLSEQHTKDAWELQELLMYKLQTLARSDLGDDHREKTLSAVVEHLLVSDHELVEIMADGKTRDRIDLFLRLMEAWFGLTTDDLNLDVFVDTD--------LMGDDPGAHCIVPTGMERFIEHLAEP-IRDIIHTNVSV---ASINYDSPE---GVIIECT--------------------------DGRR---VTADRVIVATSLGLLQSGKLHFQPELPDVKTGALKRSKMGQYMKVLVQFPEVFWPKHATFMG 334
[Close]
BLAST of mRNA_P-fluviatile_contig1.257.1 vs. uniprot
Match: G5AHC7_PHYSP (Amino_oxidase domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5AHC7_PHYSP)

HSP 1 Score: 143 bits (360), Expect = 4.650e-33
Identity = 119/359 (33.15%), Postives = 170/359 (47.35%), Query Frame = 3 
Query:  180 KVVVVGAGMAGLSATRELLRRG-WPARKVVLVEASGKIGGRMRTRRHRTG--VMLDHGAAYIHGIDGNPLAELAKEAGIGLKQVSESNPWLETT--PSVSFCHRGELADESEATATHEAYCELMGRIRMLARGCDDANVPAGDAVEKLLLDEPFRSLPVPELS-----RLRLRLASLALWHGCDMQDMQLRSLDFEDKPFHGGQGVYGDFPGPHCVVEGGVERVAEAVASPEVWECLRLNSPVDRIALVDRDMVAKGGGVLVSIRREVTATTAIAAEAAAAPAVVEGGRGEDERKRELVRADAVIVTVPLSVLQSGELEFDPPLAEETAAALSRLSMGTYEKIIMEFEEPFWPADAPFI 1226
            +VVVVGAGMAG++    LL  G + A  V ++EA  +IGGR+ TR       V ++ GAA+IHG +GNP+AELA+E G+ LK++S  NPWL  +  P            E E   T +    L+ +++ LA    +A   A D   K L+DE      +   S     RL L L  +  W G   ++MQ+ +    D        + GD PGPHC+V  G+  + +            L++PV          V + G  + SI  E +                EG   E    R+L     V+VT  L +L+SG+L F P L    A A+SR  MG   KI+++F E FWP +A FI
Sbjct:    7 RVVVVGAGMAGVATANALLASGHFSAEDVCVLEARDRIGGRVYTRPFSAELRVKVEAGAAWIHGTEGNPVAELAREFGVELKEISARNPWLHPSSCPGFEIYDGSRRLSEEEVGETWQWQELLLRKLQKLALS-GEAEGKALDVTVKQLIDEDAELREIITSSANAWERLNLCLHLVETWMGSTSEEMQVDAFGEID--------LMGDDPGPHCIVPDGMHSLIK-----------HLSAPVKS--------VIRTGACVASINYEGS----------------EGVVIECTYGRKLTSYH-VVVTCSLGLLKSGKLHFHPELPHAKADAISRSQMGQCMKIMVQFPEAFWPKNASFI 320
[Close]
BLAST of mRNA_P-fluviatile_contig1.257.1 vs. uniprot
Match: A0A6A3ZL98_9STRA (Amino_oxidase domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3ZL98_9STRA)

HSP 1 Score: 141 bits (356), Expect = 4.800e-32
Identity = 118/359 (32.87%), Postives = 167/359 (46.52%), Query Frame = 3 
Query:  180 KVVVVGAGMAGLSATRELLRRG-WPARKVVLVEASGKIGGRMRTR--RHRTGVMLDHGAAYIHGIDGNPLAELAKEAGIGLKQVSESNPWLETTPSVSFC--HRGELADESEATATHEAYCELMGRIRMLARGCDDANVPAGDAVEKLLLDEPFRSLPVPELS-----RLRLRLASLALWHGCDMQDMQLRSLDFEDKPFHGGQGVYGDFPGPHCVVEGGVERVAEAVASPEVWECLRLNSPVDRIALVDRDMVAKGGGVLVSIRREVTATTAIAAEAAAAPAVVEGGRGEDERKRELVRADAVIVTVPLSVLQSGELEFDPPLAEETAAALSRLSMGTYEKIIMEFEEPFWPADAPFI 1226
            +VVVVGAGMAGL+    LL  G +    V ++EA  +IGGR+ TR       V ++ GAA+IHG +GNP+AELA++ GI LK++S  NPWL  +    F          E E   T +    L+ +++ LA    +A   A D   K LLDE      + E S     RL L L  +  W G   ++MQ+ +    D        + GD PG HC+V GG+  + E +++P                      V   G  + SI  E                 +EG   E    R+L  AD  +VT  L +L+SG+L F P L    A  + R  MG   K++++F E FWP +A FI
Sbjct:    7 RVVVVGAGMAGLATANALLESGHFSVEDVCVLEAQDRIGGRIYTRPFSDELPVKVEAGAAWIHGTEGNPVAELARKFGIELKEISARNPWLHPSSCPGFVVYDGSRRLSEVEVDETWQWQELLLRKLQELALS-GEAEGKALDTTVKQLLDEDSELCEIVESSTNGRERLALCLHLVETWMGSTSEEMQIDAFGEID--------LMGDDPGAHCIVPGGMHSLIEHLSAPLKG-------------------VIHTGVCVASINYE----------------GLEGVVVECTDGRKLT-ADRAVVTCSLGLLKSGKLHFHPELPLAKANVILRSQMGQCMKVMVQFPEAFWPKNASFI 320
[Close]
BLAST of mRNA_P-fluviatile_contig1.257.1 vs. uniprot
Match: A0A662XUV1_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XUV1_9STRA)

HSP 1 Score: 145 bits (366), Expect = 8.890e-32
Identity = 121/373 (32.44%), Postives = 172/373 (46.11%), Query Frame = 3 
Query:  153 DTPPPKSFPKVVVVGAGMAGLSATRELLRRG-WPARKVVLVEASGKIGGRMRTRRHRTG--VMLDHGAAYIHGIDGNPLAELAKEAGIGLKQVSESNPWLETTPSVSFC---HRGELADESEATATHEAYCELMGRIRMLARGCD-DANVPAGDAVEKLLLDEPFRSLP--------VPELSRLRLRLASLALWHGCDMQDMQLRSLDFEDKPFHGGQGVYGDFPGPHCVVEGGVERVAEAVASPEVWECLRLNSPVDRIALVDRDMVAKGGGVLVSIRREVTATTAIAAEAAAAPAVVEGGRGEDERKRELVRADAVIVTVPLSVLQSGELEFDPPLAEETAAALSRLSMGTYEKIIMEFEEPFWPADAPFI 1226
            +TP   S+ +V V+GAG+AG+SAT  LL  G + A  V L+EA  +IGGR+ T+       V ++ GAA+IHG +GNP A+LA++ GI  K++S  NPWL       F       +L+D+ +A  T E    LM +++ LAR  D D +   GD     ++D+   S P        V    RL L L  +  W G    D+ L +    D        + GD PG HC+V  G+ER  + ++ P + + +  N  V  I     D V                             V+E   G        V AD VIV   L  LQ+G L F P L      A+ R  MG Y K++++F E FWP  A F+
Sbjct:  498 ETPLTSSY-RVAVIGAGLAGVSATNALLASGHFGASDVCLLEAQSRIGGRVHTQSFSDTLPVNVEVGAAWIHGTEGNPFAKLAQKFGIAFKEISPRNPWLHPGSCSDFLLFEGSRQLSDQ-QAAETWEWQDLLMRKLQALARAADRDGH---GDKSVAAVVDDLVASDPQLVEVMAGVNARERLDLFLRLIEAWMGLTADDLNLDAFVETD--------LMGDDPGAHCIVPAGMERFIDHLSEP-LKDVIHTNVSVSAINYDGPDGV-----------------------------VIECTDGRT------VTADRVIVATSLGFLQTGRLHFQPELPSVKTGAIKRSKMGQYMKVLVQFPEVFWPKQATFM 821
[Close]
BLAST of mRNA_P-fluviatile_contig1.257.1 vs. uniprot
Match: A0A662WVK3_9STRA (Amino_oxidase domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WVK3_9STRA)

HSP 1 Score: 143 bits (360), Expect = 2.950e-31
Identity = 117/364 (32.14%), Postives = 166/364 (45.60%), Query Frame = 3 
Query:  180 KVVVVGAGMAGLSATRELLRRG-WPARKVVLVEASGKIGGRMRTRRHRTG--VMLDHGAAYIHGIDGNPLAELAKEAGIGLKQVSESNPWLETTPSVSFC---HRGELADESEATATHEAYCELMGRIRMLARGCD-DANVPAGDAVEKLLLDEPFRSLP--------VPELSRLRLRLASLALWHGCDMQDMQLRSLDFEDKPFHGGQGVYGDFPGPHCVVEGGVERVAEAVASPEVWECLRLNSPVDRIALVDRDMVAKGGGVLVSIRREVTATTAIAAEAAAAPAVVEGGRGEDERKRELVRADAVIVTVPLSVLQSGELEFDPPLAEETAAALSRLSMGTYEKIIMEFEEPFWPADAPFI 1226
            +V V+GAG+AG+SAT  LL  G +    V L+EA  +IGGR+ T+       V ++ GAA+IHG +GNP A+LA++ GI  K++S  NPWL       F       +L+D+ +A  T E    LM +++ LAR  D D +   GD     ++D+   S P        V    RL L L  +  W G    D+ L +    D        + GD PG HC+V  G+ER  + ++ P + + +  N  V  I     D V                             V+E   G        V AD VIV   L  LQ+G L F P L      A+ R  MG Y K++++F E FWP  A F+
Sbjct:   18 RVAVIGAGLAGVSATNALLASGQFGTSDVCLLEAQSRIGGRVHTQSFSDTLPVNVEVGAAWIHGTEGNPFAKLAQKFGIAFKEISPRNPWLHPGSCSDFLLFEGSRQLSDQ-QAAETWEWQDLLMRKLQALARAADRDGH---GDKSVAAVVDDLVASDPQLVEVMAGVNARERLNLFLRLIEAWMGLTADDLNLDAFVETD--------LMGDDPGAHCIVPAGMERFIDHLSEP-LKDVIHTNVSVSAINYDGPDGV-----------------------------VIECTDGRT------VTADHVIVATSLGFLQTGRLHFQPELPSVKTGAIKRSKMGQYMKVLVQFPEVFWPKQATFM 333
[Close]
BLAST of mRNA_P-fluviatile_contig1.257.1 vs. uniprot
Match: W2R761_PHYPN (Amino_oxidase domain-containing protein n=20 Tax=Phytophthora TaxID=4783 RepID=W2R761_PHYPN)

HSP 1 Score: 138 bits (348), Expect = 6.870e-31
Identity = 116/364 (31.87%), Postives = 172/364 (47.25%), Query Frame = 3 
Query:  168 KSFPKVVVVGAGMAGLSATRELL-RRGWPARKVVLVEASGKIGGRMRTRRHRTG--VMLDHGAAYIHGIDGNPLAELAKEAGIGLKQVSESNPWLE--TTPSVSFCHRGELADESEATATHEAYCELMGRIRMLA---RGCDDANVPAGDAVEKLLL--DEPFRSLPVPEL-SRLRLRLASLALWHGCDMQDMQLRSLDFEDKPFHGGQGVYGDFPGPHCVVEGGVERVAEAVASPEVWECLRLNSPVDRIALVDRDMVAKGGGVLVSIRREVTATTAIAAEAAAAPAVVEGGRGEDERKRELVRADAVIVTVPLSVLQSGELEFDPPLAEETAAALSRLSMGTYEKIIMEFEEPFWPADAPFI 1226
            KS  +VVVVGAGMAG+S    LL    + A  V ++EA  +IGGR+RT+       V ++ GAA+IHG +GNP  ++AK+ GI  K+V+  NPWL      +  F    +   + +   T +    LM +++ LA      D  +      V+ L+   +E   ++  P   +RL + L  + +W G +  ++QL   DF D        + GD  G HC+V  G+E   + +A P V E +  N  V  I   D+D      GV++                             D R+   V AD V+VT  L  L+SG+L F P L      A+ R  MG Y KI++EF E FWP ++ FI
Sbjct:   19 KSSYRVVVVGAGMAGVSVANALLVSNEFAASDVCVLEAQSRIGGRIRTQPFSDSLPVNVEVGAAWIHGTEGNPFTDMAKKFGIVFKEVAPRNPWLHPGACKNFLFFDGDKQLPQEQVDETWQWQDLLMHKLQDLATSPNAVDHQDKALSAIVDHLVASDEELGEAMKAPNARARLDMCLKLIEVWMGVNDDEVQLD--DFTDIE------LIGDDAGAHCIVPAGMEHFIDHLAEP-VKESIHTNVVVTSINYEDKD------GVVIEC--------------------------SDGRR---VSADHVVVTSSLGFLKSGKLHFQPELPAAKLGAIERSKMGQYMKILVEFPEIFWPENSTFI 338
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.257.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KT75_9PHAE8.190e-20355.78PAO protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0... [more]
A0A6A4F487_9STRA6.630e-3533.15Amine oxidase n=2 Tax=Phytophthora TaxID=4783 RepI... [more]
A0A6A3ME88_9STRA5.800e-3433.15Amine oxidase n=9 Tax=Phytophthora TaxID=4783 RepI... [more]
A0A421H084_9STRA1.690e-3333.61Amine oxidase n=3 Tax=Phytophthora kernoviae TaxID... [more]
V9F1M3_PHYPR3.070e-3332.41Amine oxidase n=11 Tax=Phytophthora TaxID=4783 Rep... [more]
G5AHC7_PHYSP4.650e-3333.15Amino_oxidase domain-containing protein n=1 Tax=Ph... [more]
A0A6A3ZL98_9STRA4.800e-3232.87Amino_oxidase domain-containing protein n=2 Tax=Ph... [more]
A0A662XUV1_9STRA8.890e-3232.44Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
A0A662WVK3_9STRA2.950e-3132.14Amino_oxidase domain-containing protein n=1 Tax=No... [more]
W2R761_PHYPN6.870e-3131.87Amino_oxidase domain-containing protein n=20 Tax=P... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:3154452..3165096 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score667.9
Seed ortholog evalue4.8e-189
Seed eggNOG ortholog2880.D7FK53
KEGG rclassRC00053,RC00225
KEGG koko:K13366
KEGG ReactionR01914,R09076
KEGG Pathwayko00330,ko00410,ko01100,map00330,map00410,map01100
EggNOG free text desc.positive regulation of spermidine biosynthetic process
EggNOG OGsCOG1231@1,KOG0029@2759,KOG0685@1,KOG0685@2759
EC1.5.3.14,1.5.3.16
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionAmine oxidase
Ec32 orthologEc-04_005780.1
Exons12
Model size3035
Cds size1968
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.257.1prot_P-fluviatile_contig1.257.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig1 3155373..3163022 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815313.096456-UTR-P-fluviatile_contig1:3154451..31553721622815313.096456-UTR-P-fluviatile_contig1:3154451..3155372Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 3154452..3155372 -
1693561469.6122918-UTR-P-fluviatile_contig1:3154451..31553721693561469.6122918-UTR-P-fluviatile_contig1:3154451..3155372Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 3154452..3155372 -
1622815313.2229764-UTR-P-fluviatile_contig1:3163022..31631121622815313.2229764-UTR-P-fluviatile_contig1:3163022..3163112Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 3163023..3163112 -
1693561469.7381415-UTR-P-fluviatile_contig1:3163022..31631121693561469.7381415-UTR-P-fluviatile_contig1:3163022..3163112Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 3163023..3163112 -
1622815313.232804-UTR-P-fluviatile_contig1:3165040..31650961622815313.232804-UTR-P-fluviatile_contig1:3165040..3165096Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 3165041..3165096 -
1693561469.754255-UTR-P-fluviatile_contig1:3165040..31650961693561469.754255-UTR-P-fluviatile_contig1:3165040..3165096Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 3165041..3165096 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815313.1065438-CDS-P-fluviatile_contig1:3155372..31556701622815313.1065438-CDS-P-fluviatile_contig1:3155372..3155670Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3155373..3155670 -
1693561469.625953-CDS-P-fluviatile_contig1:3155372..31556701693561469.625953-CDS-P-fluviatile_contig1:3155372..3155670Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3155373..3155670 -
1622815313.116389-CDS-P-fluviatile_contig1:3156378..31567131622815313.116389-CDS-P-fluviatile_contig1:3156378..3156713Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3156379..3156713 -
1693561469.634748-CDS-P-fluviatile_contig1:3156378..31567131693561469.634748-CDS-P-fluviatile_contig1:3156378..3156713Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3156379..3156713 -
1622815313.1253495-CDS-P-fluviatile_contig1:3156965..31573191622815313.1253495-CDS-P-fluviatile_contig1:3156965..3157319Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3156966..3157319 -
1693561469.6445398-CDS-P-fluviatile_contig1:3156965..31573191693561469.6445398-CDS-P-fluviatile_contig1:3156965..3157319Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3156966..3157319 -
1622815313.1372533-CDS-P-fluviatile_contig1:3157654..31578851622815313.1372533-CDS-P-fluviatile_contig1:3157654..3157885Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3157655..3157885 -
1693561469.6542964-CDS-P-fluviatile_contig1:3157654..31578851693561469.6542964-CDS-P-fluviatile_contig1:3157654..3157885Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3157655..3157885 -
1622815313.147-CDS-P-fluviatile_contig1:3158014..31580651622815313.147-CDS-P-fluviatile_contig1:3158014..3158065Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3158015..3158065 -
1693561469.6626658-CDS-P-fluviatile_contig1:3158014..31580651693561469.6626658-CDS-P-fluviatile_contig1:3158014..3158065Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3158015..3158065 -
1622815313.1568136-CDS-P-fluviatile_contig1:3158581..31586651622815313.1568136-CDS-P-fluviatile_contig1:3158581..3158665Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3158582..3158665 -
1693561469.6710732-CDS-P-fluviatile_contig1:3158581..31586651693561469.6710732-CDS-P-fluviatile_contig1:3158581..3158665Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3158582..3158665 -
1622815313.1661901-CDS-P-fluviatile_contig1:3159324..31594941622815313.1661901-CDS-P-fluviatile_contig1:3159324..3159494Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3159325..3159494 -
1693561469.6798868-CDS-P-fluviatile_contig1:3159324..31594941693561469.6798868-CDS-P-fluviatile_contig1:3159324..3159494Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3159325..3159494 -
1622815313.1806886-CDS-P-fluviatile_contig1:3160495..31606671622815313.1806886-CDS-P-fluviatile_contig1:3160495..3160667Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3160496..3160667 -
1693561469.6884394-CDS-P-fluviatile_contig1:3160495..31606671693561469.6884394-CDS-P-fluviatile_contig1:3160495..3160667Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3160496..3160667 -
1622815313.1928174-CDS-P-fluviatile_contig1:3161893..31620131622815313.1928174-CDS-P-fluviatile_contig1:3161893..3162013Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3161894..3162013 -
1693561469.6998065-CDS-P-fluviatile_contig1:3161893..31620131693561469.6998065-CDS-P-fluviatile_contig1:3161893..3162013Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3161894..3162013 -
1622815313.2017965-CDS-P-fluviatile_contig1:3162468..31625851622815313.2017965-CDS-P-fluviatile_contig1:3162468..3162585Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3162469..3162585 -
1693561469.7137148-CDS-P-fluviatile_contig1:3162468..31625851693561469.7137148-CDS-P-fluviatile_contig1:3162468..3162585Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3162469..3162585 -
1622815313.2135203-CDS-P-fluviatile_contig1:3162986..31630221622815313.2135203-CDS-P-fluviatile_contig1:3162986..3163022Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3162987..3163022 -
1693561469.7293305-CDS-P-fluviatile_contig1:3162986..31630221693561469.7293305-CDS-P-fluviatile_contig1:3162986..3163022Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3162987..3163022 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig1.257.1

>prot_P-fluviatile_contig1.257.1 ID=prot_P-fluviatile_contig1.257.1|Name=mRNA_P-fluviatile_contig1.257.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=656bp
MGDTPPPKSFPKVVVVGAGMAGLSATRELLRRGWPARKVVLVEASGKIGG
RMRTRRHRTGVMLDHGAAYIHGIDGNPLAELAKEAGIGLKQVSESNPWLE
TTPSVSFCHRGELADESEATATHEAYCELMGRIRMLARGCDDANVPAGDA
VEKLLLDEPFRSLPVPELSRLRLRLASLALWHGCDMQDMQLRSLDFEDKP
FHGGQGVYGDFPGPHCVVEGGVERVAEAVASPEVWECLRLNSPVDRIALV
DRDMVAKGGGVLVSIRREVTATTAIAAEAAAAPAVVEGGRGEDERKRELV
RADAVIVTVPLSVLQSGELEFDPPLAEETAAALSRLSMGTYEKIIMEFEE
PFWPADAPFIGCCCSPPPSPPPLSPTPPPPPATAAATVSAVVAAPAATAT
AATDAATAATATSGEATAATAAAGASTSVTTAPAAAAAAALATAAWAARA
AGHYSCSPLPAIPIFLENYLWLKGVPVLTAAVTGERARILSASAAAAAAA
AGAVATAAGGEGVGETGGWRAAHAREMYHRMIKPALVQGLCGEEAEVPEP
VSVFVTSWAEEPFQRGSYSFFPLGARDDDIHKVGQGAAYGLPLGAEVKSG
PGGVPGGDAPGAERVFFAGEATVPGLEGSMHGAYLSGVRAVEDVAHALGL
HQLLY*
back to top

mRNA from alignment at P-fluviatile_contig1:3154452..3165096-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig1.257.1 ID=mRNA_P-fluviatile_contig1.257.1|Name=mRNA_P-fluviatile_contig1.257.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=10645bp|location=Sequence derived from alignment at P-fluviatile_contig1:3154452..3165096- (Porterinema fluviatile SAG_2381)
GTCTTACACCATTGCTGTTGAACATGTCGCAACAGCTGTAGGTAGGCTGC
AAGCAGGTGCGACACCGATTCAGCGTTGATTTCTCCGCACAATTTGCACG
TGTGTTTCCATCATATAATGTTGTGGTTTCTGCACAGAGCGAAAAAACAG
CCAACCTAAATTTGTTACACTGTCGGAACCAACGGAGGCCGGCGACGTGT
CGTTCGCACGGATGGTTTTGTATCACCCAGTCCCTCAGTCATGAGTTGGC
GTGAGCGAGATCGTCTCGTGGCTCTCCTACCATCCCGTCGCGGTTGTTGT
TGCGGTTCCCGTTGATTTTTCTTCAAATCATGGTGAGTGTTTGTGTTGAG
TAAGAGTGTCATGATCCACATGCGTGGTCCGGCCTCCCAAGCGCGCTCGG
CGCCGACGAGCGCGCTGTTCGCTGTACCACCAAATTCAGAAAGGCGGCAA
AGTGCAGAATTGGCAGCATTCCCGGCTCTCTGTCCATGTACAGCTCGGTT
GGAATATTTGTCTGCTGCCGCGGCTGTGTGCGTGTAAACACGAGTGAAGC
GTTCGGGAAGAGAGGGCCGTGTTCTGAAACTTGTCCTCGAAGTAGTGTTA
AGCGTACCCGACACACGCCAGCGACGAAAGGTCATTCGCCTTCGTTGCTG
CGGAATGACGCGCGCACAATCGCAAGTGAGACAGCCTTGGAACACTCGTA
GATGGGGCACGCATTCTTTTCTTCAAGCAGCAAAAATGTACTGCATGCTT
CATGTGCGGGTGCATCCTCGTATCAGTCAAATGTATTTCGCATCCGGCCC
TGCACTTACAATTACTTATACTGTGGGTACCACATGTCAGTATATAAGGC
TTGGGGCACCTTATCTCACGTCGGGCAAACACCCTTTTCACAAGTGGCGT
CGACGGCAGGATTGTCACCCCTGCAATGACGAAGTCCCGGGTTCGAATCC
GGGCAAGTGAAAATGGGTGGTTTTTTGTCCGCCGCCAGCCGGTCGGGTTC
CGGTTAGCGTACATGCTACGGGGGGTGCGTCGTGGTACCCGCGTATTTGT
CTACGATGCTGAGCTGTCCGCTCGCTCGTATCCGGGGGGGTATGTGGGTA
CCACATGTCAGTATATAAGGCTTGGGGCACCTTATCTCACGTCGGGCAAA
CACCCTTTTCACAAGTAAGTGAGACAGCCTTGGAACACTCGTAGATGGGG
CACGCATTCTTTTCTTCAAGCAGCAAAAATGTACTGCATGCTTCATGTGC
GGGTGCATCCTCGTATCAGTCAAATGTATTTCGCATCCGGCCCTGCACTT
ACAATTACTTATACTACGAGTAGTCTATATCCTGTTCATGTGGCCGTCCA
CCATCCCCCCCCCCCGCACTCCTTGTACACAATCATACACCGTGCTGAAT
AAAAACTCAACTCGCGTGTGGCTTTCTAATGTGCCTCTCTCGCACAGCGG
GAGAAAACGTTAACATCTTCGCACACTTCCTGCCTCTCTCGCTCGTCTCT
TCTCCCTTCACTTTTGCGTGCCGAAATTCCCGTTGTTATTTACCCTCCCT
CTCCCCTCCCCGTAGCACCATACTTTTGTTGTTGCCCTGGCTGGAAGCTG
TTTTACCGACCTGGCACCGGCAACTTCTTGCCGCCCGAGCCGTCCAACCG
GAACTGGTGCGGCACGATTTCGGCCCTTCCTTCTTGCCGTCTCCACACTG
CGAACGGCAGTCACCGCTTCCGACAGTTTTTTCCACTCCCAGCATCCGCA
GCTGCCGCCGCCGCCGAACTTCGGTGGGCTGCTTTTGATCATGCCAAGAT
GGCAGCATTTTGAAGAGATTTGAAGAAAAAGGCTTCGAACAATAGGGCGA
CGGGGACAACCCGGAGAGGGGAAGTCAGAGTAGCACAACAGCGAGCGGCG
GAGGCCGTTGCTCGCGGCAAGCAAGAGGAGAACTGAGTCCCTCTCTCCGT
CTCTTCTTGCTGGACGGCATTGATTTTTTCACAGGAAGAGTCTTTTCCCT
CAAGAACAACCTGGCTTATCGCACGCGAGGTTCGAGGAGAGCAGAGGGCG
GGAGGACATCATCGGCAGGAAGCCATGGGGGACACGCCGCCGCCAAAAAG
CTTCCCAAAGGTAACGCCATCACAGCCGACCGCCACTGTCATGCCCTTGC
CTCCCTCCCCTCCAAACTCCTGCCGTCACCGACTTCGTATGTATACATGA
TAACGCGGCCAACCTTTCTATCAAGATGCCGCTGTTCACTCAAGCTCTGG
CGCACCTGAAGATGGCAGCACGGCACCACTTTCGTTAGGTAGGCGGGGAG
GCCCAAGAGTGCTGCGAGCGCCAGAAGGAATAAATCAGCCCATGCCGAAG
CTCTGCTGCAGTTGTGCGACGCCGGGTATCACAAGACGCTCGACTATCCT
CTGCTTGCGTCGATGATGTTTGCGGGAATCGACACAACCACAAACGACGC
GCACGCATGCAGCGGGAGCGAACGAATCAAACGAAAAATGACCTGTTGTC
GGTATCGGCAGGTGGTGGTCGTCGGCGCCGGCATGGCGGGGCTCTCGGCC
ACGAGGGAGCTCTTGAGGAGGGGCTGGCCCGCGCGCAAGGTGGTGCTGGT
GGAGGCATCCGGGAAGATCGGGGGTCGGGTGAGAGCTGGCGAGAGGGAGG
GGGAAGGATAAATATTATGTCGAGCGAGAAGAGGGGGAGTAAAGAGAAGA
GAGCCACAGGTAACAGAGAGAGCGAGGGACAGAAACAAAATGGCAGAAAG
AAAAGACCTCAGAGGTGCAGGTTCGACCTGTTACGCTGTTACGGACTTGC
GTGGCGAACGCCCTGGACTCCCCTCCCCTGCTCCTCGCGCACCGCTACTT
AGCAGTGAAAGCGAAGAAGAAAAAGTCTGGTCGACTTCATCGCGGTCAAA
TCGACAACCATGCCATCTTTGCCCTCGCTCTCCCCGTCCTCTCAACCTCC
CTCTCGCGCTCATCCTTTCTCTCTTTGTCTCCATTCCTATTTCCTCTTGG
ACTGCCTCATTTGTCCCTTCTCCCTCTCTCCCTTCCCCGCTCTCGCTCTC
GCTCTCTCTCTCGTCGTCGTCTCTTGTGATCAGATGCGCACTCGTCGGCA
CAGGACAGGCGTCATGCTTGATCACGGCGCGGCCTACATACACGGCATCG
ATGGAAACCCGCTCGCGGAGTTGGCCAAGGAGGCCGGCATCGGGCTGAAA
CAGGCGAGTGGAAGCGACAAGGAGAGCGTATGTTCGTCCATCCGTTCGCC
TGTCCGTTAATCCTTGTGTACGTCCGTACAAGTACCTCGTGTATGCATGC
CCCGTCCATCCATGACGTTGAAGACAATAGGAGTCATTGTCTGTCCAGTC
AGACCGTCGTGCGCGCACGCCCACAGGTGCCCGTTGAATTAAAGCCTGGT
GCACCCATACCCCGTCCATCCGTGGCCCGTGCATCCGTGCCCCGTCCGTC
CATTACGTAACCCTTCTGTTGAGAGAGAGACAGAGACAGAGAGAAGTAGT
CATAGGTATGGAGAGTAGAGAGACGAGAGAAGTAGAGGTTGAGGAGGAGG
TAGAGAAAGGTAGAGAGTGATGCGATCGAGCCGTCCCTCGTGCAACGTGG
CTCTTCCATTTATCATTCACGACGTTTTTTTTTTGAAAGAATGAGGGGCT
GGGTGCGTAGCGTTGCACGGGTCGGGGAAAAGAAGCGGGACCATGCGATG
TTGAAGGTGCCACGCTATTCATCTGCCGCTACAACAGTGAAACAAGCAGT
GGCACGTTTCTGTCGCGTCGGTCGCGGTATCGCGGTGTGGCGTAAGGTAC
TATTGCATTCGTAGCTCTTGTACAATCACAAGCTTGTCTTTGTTCTAGAT
AGTGGATTCCTGGCGGCCTGCAGCTGCAGCTCAGCTGCTGCTGCTGCTCC
TCGTAAATCGTGCGTTGGCGCACCCACGCAATTGGTCGATCGCCGTCGTG
GTTCATAAGCTCCAGTAGCACGAGCACCAGCACCAGCACCAGCAGCAGTA
GCGGTTGGTTCTCTGCTGTCCCTTCGCTTTCATGAGGGGCATGCACGAGC
GATGACAAGCAAAAGATGCACGTACGCCCGAGATACAGCAGCCACCGTAC
CTTACCGAACCGTAGCGTGCCTCACCGTCACTCTCGCACGATTTCGTCTA
CGTACGACGACGACGACGAGGAGGACAAGTGAGAGGAAGAAGAGTGAAAA
GACGGTGGTGGAGAAGACGGCGGCGGCGATCACAAGAAATGACGCAAAAT
ATCATGACATTGCCTTTTCGTGTCACGCTGTGCGCTAGCAGACGAAGGAA
AGGACGTAAGAATCAAGAAACGGGCGAATCAAGGAACCAAAGATTTAATG
GTCGAAAGAATCAATGCACGAAATAGCCAATGAACGAAAGTATCAACGAA
CGAAATATTGAAACGAACGGATAGAGCAGGTGTCGGAGTCCAACCCCTGG
TTGGAGACCACGCCCTCGGTGTCGTTTTGCCACCGGGGCGAGCTCGCGGA
CGAATCCGAGGCGACCGCTACCCACGAGGCGTACTGCGAGCTGATGGGCC
GGATCAGGATGCTTGCGCGGGGCTGCGACGACGCGAACGTTCCCGCAGGC
GGTGAGGGGTGCGAGAGATAGGGGGGGGAAGAATGACGAAGAACCGAAGA
AAAAGACGGAGAGAGAGAGCGAGAGGGAGAGGGAGACGGACAAAGAGAGA
GACAAACAGAGAGCCAAGAGAGCCATTTCTCCGCCCCTCTCTCTATCTCG
CCCGATATCGTCCGTGTTTTTGGGCCCATAACATTTTGGGCGCTGACGAT
GCTCCCACTGATCCTCCCTTTCTCTCAATACTTCCCATATTCCGCTTTTG
TTTTCGTCGCCGAACGCTTTTGGCACAGATGATGCTAACACTGGTCTCTC
TCACTGACCACCCCCCGCGCGAGCGCCGTCACAACGTTCCGCCTTCGACC
CCCGGCACCGGGCGTAAAAGATCCCCCCCCGATCCCCCCCTCCCGCTGGC
TCTCACCTCGGTGTTTGCCATCGGGATTGGGTTTTCGTCGCTTGGCAACG
ACGTTGTAAAACAAGCCAATTCACTTCGTGAACTCGGCAACCAGGTTACC
GTCTTTTTTTTTCCTCTGGTTTTTTGGCGGTGACCATAATGGTGGTCGAG
AAGATCATGTGCGGGGTGGAGAACCCTCACTCCGCGCAAGGGGGATGATC
GCACCACGTTGTGTTAAACTGGTCAAGCACCCTCGAGGCAGTTACAGTGC
TTACAACTGTCTCTGGAAGTGAACGCACCAGAAAATAAATTAAGCCATAC
GCAGCTGTCATCCGTATGCAAAGAAGTAAGCACAAGATGCCGAACACCCT
TAGCAGGATGCAGCGCACCCTTCATGCGACTCGCCGAATACCTCACGGCG
CTTCGCGCTTGGTGGTGTGAGAGCCTGGTCCGGTGAGAACCCGGCGTGCT
CCGTCCCAGCTTTGTAGGGATGCGAGGTCAATGGTCTAACGACTACGGCA
TGCACGACTATGAGTACACCCCGATCCCCCCCCCCTCCTCCTCCGCCTTC
CGTCCCCGCACGCACACTTAACCACGAAGCTGCTCTCCGCCGCTGCTCGC
AGATGCTGTCGAGAAGCTCCTGCTGGACGAGCCGTTCCGGTCTCTGCCCG
TGCCCGAGCTGTCGCGGCTGCGGCTTCGGCTGGCGTCCCTCGCGCTGTGG
CACGGCTGCGACATGCAGGACATGCAGCTGAGGTCGCTGGACTTCGAAGA
CAAGCCTTTCCACGGCGGGCAGGTGTCGAAGTATTTGGGGTGGGGGGTGG
GGGGGCGAAAAATGGTTCCGAACAACGGCGTGGACAGGTAGATGCACGAT
ACACACGCTGGGCTACTTGAAGGAGGGGGAGGTTTGATCGTGTGTATTGT
GTGTGCGTGCGCGTTCGTGTGTTTGTGGTTTTTGGGGCATTTCGGGGCAT
TCCTGATTCGATTATCCGCGTCATCACCACCGGGAAGAATAAGGTCAGTG
CCAAAGAAAGTGGTTGGGGAGAAAGCAGGGCACATCGGCTCCTCGTCGCG
CCGCTTCTTTGCGAGTGCGAGAACAAAAGCCCTGCCCCGCCATTATTGGC
ACCGCCGCCGCGCGCAAATATGAACTTGTGCGTGAAAGGGGGGTGGTGGT
GGGGGGTGCCCGGTCCATTTTGCTGCCGTTTGTGTGTATATTTGTGCCCC
TCCAGGCCTTCGTGCCAATGCTGCTTTTGCGATGGCGCCGTGTGCGCAAT
GTAATCATCATCGCGATTATTGCCACGCATTCTTGCAGAACAAGTGTTTC
AGCTCACGACGTACCTAACACATCACCTCCCCAATGTTGCCTTTTCTTCT
TGGCCCTTCGTGTTGCGCCGGACGGATGGTCTACAATCGCATATCCTTCC
CGCCGCCGTTGCCTTTTTTATTCTTCTTCAGGGCGTGTACGGCGACTTCC
CCGGGCCGCATTGCGTTGTCGAAGGCGGTGTCGAGCGGGTGGCTGAGGCG
GTCGCCTCCCCCGAGGTTTGTGAATGGCCGCGCGACCGCGGAGGATCCTT
GCCAGCACATTTTTTTTTGCCTGCGACTAAGCAAGTACTTCGCCGCATGA
AGATGGGAGGATGGCTTATATCGAGCACGATTGTGCAAAGCGCATTGTTC
GTTTCCCGCTACTCTGGATGCACTTCCGTGCTTCGGCAGCGCCAGCGGCA
GCGGCAGCCGTAGCAGCATGCCAGTCTTCCGTAGGTTTTACCTTTTATTT
CTGTCATTTCGATCCCGAAGTTCCCTTCATGTGTGATTGTTGAATTCGGC
ATGACCACGTCTGAAACGACCCCCCTGCCACCCCTTTGCCCCGACCCCGC
CTCTGCCTAGTTGCGCACGCCTTCTACTTCCCACATCTACGGCCCCCTCA
CCTCCACCATCCAATCTCGTGTTCCTCCCTCATCGACCCGTTTCCGCCAC
CCCGTCCCCTCCCTCTCGTCGCTCGGCTCGGTGTTGGTCTTCCCTTTGTT
GGTCGTCTCGTGTCCTCGGCGATCGGGAAAGGTTTGGGAGTGCCTTCGCC
TGAACTCTCCGGTCGACCGGATAGCCCTCGTTGTCGACACCGTCGGCGAG
CGGGAGGACGGCAATCCCCGCACAAATGCAACCGCTGCCGCCGCCGTCGA
GGCTGGGAGCAGCGGCTGCAGCGGTGGCGTTGGCGGCTTGGGCGGCGATG
AGATAGAGAAGGACAGGGATATGGTAGCAAAGGGTGGAGGTGTCCTTGTT
TCCATCCGGAGAGAGGTGACAGCGACGACAGCGATAGCGGCAGAAGCGGC
GGCAGCACCAGCGGTAGTGGAGGGAGGGCGGGGTGAGGACGAGAGAAAGC
GGGAACTGGTGCGGGCAGACGCCGTCATCGTGACTGTGCCGCTTTCGGTG
CTGCAGTCAGGAGAGTTGGAGTTCGACCCGCCTTTGGCTGAGGTACGTCT
TTGTGGTTTCGTGTAGCGCTGATATGGACTACTCAGCCCTCAACTGAACG
CAAGACCAGCGCTATTTTTTTGGCTCCAGCAAGTGTGTGACTAAAAACGA
CAGTGTCGTGGGAGGAACTTGAGTCCCCTTCACATTGTGAAAGGAGTGAG
AACCGATGGTTTTTCGTAGGACGGCGTCCAGCAGGTTTTGAGGCAAGTTG
AGGGCGGAAAAAACAAAACCGTTTGACGTTCCCACGCACCAGTTGCCACA
ATCTATTGACGTATTGCTTTGAAGTGCAAAGAGACCATCTTGTGTTTCTT
GTTTATTGGAAATTATTCTCTACGCAGGAAACAGCGGCCGCTCTGTCGCG
GCTGAGCATGGGCACGTACGAGAAAATCATCATGGAGTTCGAGGAGCCTT
TCTGGCCCGCGGACGCGCCCTTTATCGGCTGTTGCTGCTCTCCACCGCCC
TCTCCGCCCCCGTTATCACCCACGCCCCCGCCCCCACCCGCAACGGCGGC
TGCAACAGTCTCGGCGGTGGTGGCGGCACCAGCCGCGACAGCGACGGCTG
CCACGGACGCAGCGACGGCAGCCACAGCCACATCTGGGGAAGCGACGGCA
GCCACAGCCGCAGCAGGAGCGTCAACTTCAGTCACGACCGCACCAGCAGC
GGCGGCAGCTGCAGCCTTAGCGACAGCAGCAGTGGCAGCGACGCCACAAG
AAACGGCCAAGAATGGTAGACTCTCCGCAACTGGCGCAAAACATACGACG
GCGGCAGCACCGACGGATACCGCGACATCAAACGGGTCCATAGCTGCGGC
GACGGAGGAGGCGATCGCTGCCGCCGCCGCAGCGGCGATGGAAACCTTGC
AGGCCCCGAAGACGTGCGCTCCGGCGACGGCAGTCGGCTGTCGGCATTCC
GCCGCCACGGTGGAAGGCCGAGATCCCTGCCAGTGGGCAGCTCGCGCCGC
CGGTCATTACTCTTGTTCTCCCCTCCCGGCGATCCCGATTTTCCTCGAAA
ACTATCTGTGGTTGAAGGGGGTTCCGGTGCTGACGGCCGCAGTCACCGGC
GAGCGGGCGCGTATTTTGTCTGCTTCTGCTGCTGCTGCTGCTGCTGCTGC
TGGTGCGGTGGCGACGGCAGCCGGTGGCGAGGGCGTGGGCGAGACCGGCG
GCTGGAGAGCCGCGCACGCGAGAGAGATGTACCACCGGATGATTAAACCC
GCCCTCGTGCAGGGGCTGTGCGGGGAGGAAGCGGAAGTGCCCGAGCCGGT
GTCCGTGTTTGTCACAAGGCGAGTCGCCCAGAAGAGAAGAATGGCCGTGG
TCAATGACCTCGTCTTTCGTCCACGCGCAGATACAAACGGTAACAGATAT
GTGCTGCGACTTCCTTTCGGCGTGAGATTTCGTCGGCCAACTCAAGAGAG
ACAGCGGATCAGCTTTTGAATCACCTCCGCGTGGTGGCATCGGGGTATCG
TCTCCGCTGCGGCGCTCCGAACGTTCGTGGCCACGGGTTGACGCCCTCCT
TATTGCCGAGATAGTGTTTCGGCCTTGGACCAAAAGAGGGGGGGGGCGTG
CGCCGCCAGGCCTTAGATTAACGTTTTCCGTACTCACGCATCATTTACTT
CTATCAGGGGGGCTGAAATGGTAGCGAGGGGTGAAGGTCCTCTGGCCGTT
TGCCGGAGACGTCGTTGCTATCGCCTTATCTTGTGGATGGCTATTGAGAA
GAAAGGCGAGCCCCCCCGTCAGACACAAAACACACCCCATCCCGTGGTTT
CTGCGGTTTCAAAAGCGTCTTCCTTTGTTTCCTCTCCTAGGCTGATGCCG
TCTTCGCCGCCAGCCGGTTGCTGAACGCGATCGATGCAACTGTTGAACGA
AAAAACCCGCACACACGCTCGTACGCCTTTACCGCCCCCTTCCGACTCGC
CCCCCCGCCCCCTTCGGATTCCCCCGCCGGGCGCCCCGCCCTCCTCCTCA
CACCGCCGCTAACAACGACGAAGCAGTTGGGCAGAAGAACCTTTCCAGCG
AGGGTCGTACAGCTTTTTCCCGCTCGGGGCCCGGGACGACGACATCCACA
AAGTGGGCCAGGGCGCCGCCTACGGGTTGCCGCTGGGGGCGGAGGTCAAG
TCTGGGCCCGGCGGCGTCCCGGGGGGGGATGCCCCGGGGGCCGAGCGTGT
GTTCTTCGCCGGGGAGGCCACGGTACCCGGGCTGGAAGGGAGCATGCACG
GCGCCTACCTGTCCGGTGTACGCGCGGTGGAGGACGTCGCGCATGCATTG
GGGTTGCACCAATTGTTGTATTAATAGGGGGCAGCGGGTGTGGCGGATGT
GGGTGTCGTTGTTTCACTTGGTAGTGGCGGCGGTGTTAGCGGGAGAAGAC
GCGTGGGCTTGCAAGACTGGTCCTAGATTTTTTTGCGCAGCGTTCGGTCT
GCCTGCTCTGCACCGAGGACGCGTACTGCCGTACTCAGATGTATGGCGTG
CCGCCACATACCTGGGTCCCCCCAAGGTTCCTGTCATGCTGTTTTTGCGA
GGAAGCACAGGCCAAACCCCGCGTGGGTACGCGTTCGGTCATTTACGGGG
CGGACTGCTCACTTCTCCCGCAGCGCTGTGACTCGACGTGCAGCAAACAC
GGATCCCGTTAGTGTAGCTTTTAATGCCTCGACAGCAGCAACAGCTTTGG
AAAACAAGGTGATTTTTTTAAAGTACCCCCCGCTGCAGGTTGACCAGGAA
ACCGCCGCAGGGGGGGGGAAAGGGGCGGCAGAATCTTTTTTTGGATTGTC
TACCTCCGTTTTGCAACCTGTTTGGTACACCTTCGCTCTCGTTGTCGCCG
TCGTCGTAGACATTGTCAATTTTGTTGATGTCGGTGTTAGTGTTGGTGTT
GTGGCTGTGATTGTTATAGTGGTTGATGTCAAATGTGGTTTGTTGTCAAA
TCTTCTGTCTCGAAATATTGCACTGGTGAACACCGAAGACTCTCGACAAT
GCTGCTTATGTAAGAGTTCAATCTCTTAACGCCACGTCTACCGAGAGTTT
GACGCTGCGTAAAAACAGGCGGTTCCGAACCAAAGCTGGTTTTTACGTAC
CTGCAGGTGTCTTGCTCGCTAGCATGTACAATTTGGTAGCTACATCGAGC
TGTGTGACGGGTAGACATCCACCCGCGCTCTTCTCAGAGGGGGAAAGGCA
AGGGGTGCAAGAAGTGTGTGGGGGGGGGAAATAAAGCTGATTTGT
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig1:3154452..3165096-

>mRNA_P-fluviatile_contig1.257.1 ID=mRNA_P-fluviatile_contig1.257.1|Name=mRNA_P-fluviatile_contig1.257.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3936bp|location=Sequence derived from alignment at P-fluviatile_contig1:3154452..3165096- (Porterinema fluviatile SAG_2381)
ATGGGGGACACGCCGCCGCCAAAAAGCTTCCCAAAGATGGGGGACACGCC
GCCGCCAAAAAGCTTCCCAAAGGTGGTGGTCGTCGGCGCCGGCATGGCGG
GGCTCTCGGCCACGAGGGAGCTCTTGAGGAGGGGCTGGCCCGCGCGCAAG
GTGGTGCTGGTGGAGGCATCCGGGAAGATCGGGGGTCGGGTGGTGGTCGT
CGGCGCCGGCATGGCGGGGCTCTCGGCCACGAGGGAGCTCTTGAGGAGGG
GCTGGCCCGCGCGCAAGGTGGTGCTGGTGGAGGCATCCGGGAAGATCGGG
GGTCGGATGCGCACTCGTCGGCACAGGACAGGCGTCATGCTTGATCACGG
CGCGGCCTACATACACGGCATCGATGGAAACCCGCTCGCGGAGTTGGCCA
AGGAGGCCGGCATCGGGCTGAAACAGATGCGCACTCGTCGGCACAGGACA
GGCGTCATGCTTGATCACGGCGCGGCCTACATACACGGCATCGATGGAAA
CCCGCTCGCGGAGTTGGCCAAGGAGGCCGGCATCGGGCTGAAACAGGTGT
CGGAGTCCAACCCCTGGTTGGAGACCACGCCCTCGGTGTCGTTTTGCCAC
CGGGGCGAGCTCGCGGACGAATCCGAGGCGACCGCTACCCACGAGGCGTA
CTGCGAGCTGATGGGCCGGATCAGGATGCTTGCGCGGGGCTGCGACGACG
CGAACGTTCCCGCAGGCGGTGTCGGAGTCCAACCCCTGGTTGGAGACCAC
GCCCTCGGTGTCGTTTTGCCACCGGGGCGAGCTCGCGGACGAATCCGAGG
CGACCGCTACCCACGAGGCGTACTGCGAGCTGATGGGCCGGATCAGGATG
CTTGCGCGGGGCTGCGACGACGCGAACGTTCCCGCAGGCGATGCTGTCGA
GAAGCTCCTGCTGGACGAGCCGTTCCGGTCTCTGCCCGTGCCCGAGCTGT
CGCGGCTGCGGCTTCGGCTGGCGTCCCTCGCGCTGTGGCACGGCTGCGAC
ATGCAGGACATGCAGCTGAGGTCGCTGGACTTCGAAGACAAGCCTTTCCA
CGGCGGGCAGATGCTGTCGAGAAGCTCCTGCTGGACGAGCCGTTCCGGTC
TCTGCCCGTGCCCGAGCTGTCGCGGCTGCGGCTTCGGCTGGCGTCCCTCG
CGCTGTGGCACGGCTGCGACATGCAGGACATGCAGCTGAGGTCGCTGGAC
TTCGAAGACAAGCCTTTCCACGGCGGGCAGGGCGTGTACGGCGACTTCCC
CGGGCCGCATTGCGTTGTCGAAGGCGGTGTCGAGCGGGTGGCTGAGGCGG
TCGCCTCCCCCGAGGGCGTGTACGGCGACTTCCCCGGGCCGCATTGCGTT
GTCGAAGGCGGTGTCGAGCGGGTGGCTGAGGCGGTCGCCTCCCCCGAGGT
TTGGGAGTGCCTTCGCCTGAACTCTCCGGTCGACCGGATAGCCCTCGTTG
TTTGGGAGTGCCTTCGCCTGAACTCTCCGGTCGACCGGATAGCCCTCGTT
GACAGGGATATGGTAGCAAAGGGTGGAGGTGTCCTTGTTTCCATCCGGAG
AGAGGTGACAGCGACGACAGCGATAGCGGCAGAAGCGGCGGCAGCACCAG
CGGTAGTGGAGGGAGGGCGGGGTGAGGACGAGAGAAAGCGGGAACTGGTG
CGGGCAGACGCCGTCATCGTGACTGTGCCGCTTTCGGTGCTGCAGTCAGG
AGAGTTGGAGTTCGACCCGCCTTTGGCTGAGGACAGGGATATGGTAGCAA
AGGGTGGAGGTGTCCTTGTTTCCATCCGGAGAGAGGTGACAGCGACGACA
GCGATAGCGGCAGAAGCGGCGGCAGCACCAGCGGTAGTGGAGGGAGGGCG
GGGTGAGGACGAGAGAAAGCGGGAACTGGTGCGGGCAGACGCCGTCATCG
TGACTGTGCCGCTTTCGGTGCTGCAGTCAGGAGAGTTGGAGTTCGACCCG
CCTTTGGCTGAGGAAACAGCGGCCGCTCTGTCGCGGCTGAGCATGGGCAC
GTACGAGAAAATCATCATGGAGTTCGAGGAGCCTTTCTGGCCCGCGGACG
CGCCCTTTATCGGCTGTTGCTGCTCTCCACCGCCCTCTCCGCCCCCGTTA
TCACCCACGCCCCCGCCCCCACCCGCAACGGCGGCTGCAACAGTCTCGGC
GGTGGTGGCGGCACCAGCCGCGACAGCGACGGCTGCCACGGACGCAGCGA
CGGCAGCCACAGCCACATCTGGGGAAGCGACGGCAGCCACAGCCGCAGCA
GGAGCGTCAACTTCAGTCACGACCGCACCAGCAGCGGCGGCAGCTGCAGC
CTTAGCGACAGCAGCAGAAACAGCGGCCGCTCTGTCGCGGCTGAGCATGG
GCACGTACGAGAAAATCATCATGGAGTTCGAGGAGCCTTTCTGGCCCGCG
GACGCGCCCTTTATCGGCTGTTGCTGCTCTCCACCGCCCTCTCCGCCCCC
GTTATCACCCACGCCCCCGCCCCCACCCGCAACGGCGGCTGCAACAGTCT
CGGCGGTGGTGGCGGCACCAGCCGCGACAGCGACGGCTGCCACGGACGCA
GCGACGGCAGCCACAGCCACATCTGGGGAAGCGACGGCAGCCACAGCCGC
AGCAGGAGCGTCAACTTCAGTCACGACCGCACCAGCAGCGGCGGCAGCTG
CAGCCTTAGCGACAGCAGCATGGGCAGCTCGCGCCGCCGGTCATTACTCT
TGTTCTCCCCTCCCGGCGATCCCGATTTTCCTCGAAAACTATCTGTGGTT
GAAGGGGGTTCCGGTGCTGACGGCCGCAGTCACCGGCGAGCGGGCGCGTA
TTTTGTCTGCTTCTGCTGCTGCTGCTGCTGCTGCTGCTGGTGCGGTGGCG
ACGGCAGCCGGTGGCGAGGGCGTGGGCGAGACCGGCGGCTGGAGAGCCGC
GCACGCGAGAGAGATGTACCACCGGATGATTAAACCCGCCCTCGTGCAGG
GGCTGTGCGGGGAGGAAGCGGAAGTGCCCGAGCCGGTGTCCGTGTTTGTC
ACAAGTGGGCAGCTCGCGCCGCCGGTCATTACTCTTGTTCTCCCCTCCCG
GCGATCCCGATTTTCCTCGAAAACTATCTGTGGTTGAAGGGGGTTCCGGT
GCTGACGGCCGCAGTCACCGGCGAGCGGGCGCGTATTTTGTCTGCTTCTG
CTGCTGCTGCTGCTGCTGCTGCTGGTGCGGTGGCGACGGCAGCCGGTGGC
GAGGGCGTGGGCGAGACCGGCGGCTGGAGAGCCGCGCACGCGAGAGAGAT
GTACCACCGGATGATTAAACCCGCCCTCGTGCAGGGGCTGTGCGGGGAGG
AAGCGGAAGTGCCCGAGCCGGTGTCCGTGTTTGTCACAAGTTGGGCAGAA
GAACCTTTCCAGCGAGGGTCGTACAGCTTTTTCCCGCTCGGGGCCCGGGA
CGACGACATCCACAAAGTGGGCCAGGGCGCCGCCTACGGGTTGCCGCTGG
GGGCGGAGGTCAAGTCTGGGCCCGGCGGCGTCCCGGGGGGGGATGCCCCG
GGGGCCGAGCGTGTGTTCTTCGCCGGGGAGGCCACGGTACCCGGGCTGGA
AGGGAGCATGCACGGCGCCTACCTGTCCGGTGTACGCGCGGTGGAGGACG
TCGCGCATGCATTGGGGTTGCACCAATTGTTGTATTAATTGGGCAGAAGA
ACCTTTCCAGCGAGGGTCGTACAGCTTTTTCCCGCTCGGGGCCCGGGACG
ACGACATCCACAAAGTGGGCCAGGGCGCCGCCTACGGGTTGCCGCTGGGG
GCGGAGGTCAAGTCTGGGCCCGGCGGCGTCCCGGGGGGGGATGCCCCGGG
GGCCGAGCGTGTGTTCTTCGCCGGGGAGGCCACGGTACCCGGGCTGGAAG
GGAGCATGCACGGCGCCTACCTGTCCGGTGTACGCGCGGTGGAGGACGTC
GCGCATGCATTGGGGTTGCACCAATTGTTGTATTAA
back to top