mRNA_P-fluviatile_contig1.250.1 (mRNA) Porterinema fluviatile SAG_2381
|
Overview
Homology
BLAST of mRNA_P-fluviatile_contig1.250.1 vs. uniprot
Match: D7FK61_ECTSI (Efflux ABC transporter, permease/ATP-binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK61_ECTSI) HSP 1 Score: 880 bits (2273), Expect = 3.510e-306 Identity = 529/871 (60.73%), Postives = 557/871 (63.95%), Query Frame = 1
Query: 349 SALALTAQAQRLLELARPERHLIGGAIGLLLGTTAISLTVPKVMGGLIDNVMQGTGTYTPWEAAAILMAMFGGQSIMLTGRSGLMTVAGERVAARLRNLAFGAMVVQETAFFDRNRTGDLVNRLASDVLLVQGSVTTSVAQGLRNGLMVVGCTGMLTHLSPELAAVSVAVFPLVAGVGVWFGRRMKKQQKKVQEALAGSSAVAEEALSNIRTVRQFSAEFREIKRYNEKVDISYQMATRVGITSAYFGGSMHFGGHASLCAVMALGGQQVASGALSVGDMTSFLLYSTFLAVNFGELTGVYSQIMRALGASERVMAIISSAEASSPMQPLQPSDAKS-NRDAEGGGGGTANLEIAGGAKLGDKVAGSVVFKDVHFSYPTRPHSPVLHGMTLQVEAGSSLAIVGASGCGKSTVLRLLTRLYDPQSGRIELDGIPLNTLEPRGLRDRIGVVEQEPVLFGGSIADNIRYGRPEASKEEVEMAAAVANASGFIEASSDINHRRCFPRALPHTRGITRYLRGHGMQKGFHLSASSSSSASPAFVCASTKSRGHSALEPYSHMHNSGRGGLIFFCLREPEPRSEQQGAKRSQRSSSNIKRQSFSFWSEGPESASPIHQGGKGTRAASQLPFRSALGWMYLCKKARSTEKIYMIQWAKPVARSYARAHQFGAAPPPPSDERARSWCYQKSNLRSYRRPFSPCPIDTPSTSFFELRYWPRSTLKRFLALITNISTTKEQIRNSAYTTTPGNAAHPPSPQGFPDGYDTQVGEGGVQMSGGQKQRLAIARAVLKDPAIMLLDEATSALDSESEHLVQAALERVTKGRTSLIVAHRLSTVRSMADKICVLNKGEVVEVGTYDELASKPNGHFRRLVQYQLLE 2958
SALALT QA+RLLELARPE LIGG+I LLLG+T ISL VPKVMGGLID+VMQGTG YTPWEAA ILMA+FG QSIMLTGRSGLMTVAGERVAARLRNLAFG+MVVQETAFFDRNRTGDLVNRLASDVLLVQGSVTTS AQGLRN LMVVGCTGML +LSPELA VSVAVFP VAGVGVWFGRRMKKQQKKVQ+ALAGSSAVAEE LSNIRTVRQFSAEFRE RY EKV ISY MA RVG+T A+F GSMHFGGHASLCAVMALGGQQVASGALS+GDMTSFLLYSTFLAVNFG LTGVYSQIMRALGASERVMAII+SAEA + D S RD+ ANLEIAGGA LGD VAG VVFKDVHFSYPTRPH+PVL GMTL+VEAGSSLAIVGASGCGKSTVLRLLTRLYDPQSG IELDG+PL+ LEPRGLRDR+GVVEQEPVLFGGSIADNIRYGRPEAS+ EVE AAAVANAS F+E GFPDGYDTQVGEGGVQMSGGQKQR+AIARAVLKDPAIMLLDEATSALDSESEHLVQAALERVT+GRTSLIVAHRLSTVRSMA+KICVLNKGEVVE+G+YDELASKP+GHFRRLVQYQ+LE
Sbjct: 32 SALALTDQARRLLELARPESKLIGGSIVLLLGSTTISLAVPKVMGGLIDSVMQGTGAYTPWEAAGILMALFGAQSIMLTGRSGLMTVAGERVAARLRNLAFGSMVVQETAFFDRNRTGDLVNRLASDVLLVQGSVTTSAAQGLRNLLMVVGCTGMLCNLSPELAMVSVAVFPPVAGVGVWFGRRMKKQQKKVQQALAGSSAVAEEVLSNIRTVRQFSAEFREKGRYAEKVGISYDMARRVGVTDAFFAGSMHFGGHASLCAVMALGGQQVASGALSIGDMTSFLLYSTFLAVNFGGLTGVYSQIMRALGASERVMAIINSAEAPPAIASSDNQDQDSATRDS------AANLEIAGGAALGDTVAGHVVFKDVHFSYPTRPHAPVLGGMTLEVEAGSSLAIVGASGCGKSTVLRLLTRLYDPQSGTIELDGVPLHMLEPRGLRDRVGVVEQEPVLFGGSIADNIRYGRPEASRPEVEAAAAVANASDFVE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GFPDGYDTQVGEGGVQMSGGQKQRIAIARAVLKDPAIMLLDEATSALDSESEHLVQAALERVTEGRTSLIVAHRLSTVRSMANKICVLNKGEVVEIGSYDELASKPDGHFRRLVQYQMLE 635
BLAST of mRNA_P-fluviatile_contig1.250.1 vs. uniprot
Match: A0A835ZGY2_9STRA (Efflux ABC transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGY2_9STRA) HSP 1 Score: 518 bits (1334), Expect = 1.450e-166 Identity = 345/855 (40.35%), Postives = 428/855 (50.06%), Query Frame = 1
Query: 391 LARPERHLIGGAIGLLLGTTAISLTVPKVMGGLIDNVMQGTGTYTPWEAAAILMAMFGGQSIMLTGRSGLMTVAGERVAARLRNLAFGAMVVQETAFFDRNRTGDLVNRLASDVLLVQGSVTTSVAQGLRNGLMVVGCTGMLTHLSPELAAVSVAVFPLVAGVGVWFGRRMKKQQKKVQEALAGSSAVAEEALSNIRTVRQFSAEFREIKRYNEKVDISYQMATRVGITSAYFGGSMHFGGHASLCAVMALGGQQVASGALSVGDMTSFLLYSTFLAVNFGELTGVYSQIMRALGASERVMAIISSAEASSPMQPLQPSDAKSNRDAEGGGGGTANLEIAGGAKLGDKVAGSVVFKDVHFSYPTRPHSPVLHGMTLQVEAGSSLAIVGASGCGKSTVLRLLTRLYDPQSGRIELDGIPLNTLEPRGLRDR-IGVVEQEPVLFGGSIADNIRYGRPEASKEEVEMAAAVANASGFIEASSDINHRRCFPRALPHTRGITRYLRGHGMQKGFHLSASSSSSASPAFVCASTKSRGHSALEPYSHMHNSGRGGLIFFCLREPEPRSEQQGAKRSQRSSSNIKRQSFSFWSEGPESASPIHQGGKGTRAASQLPFRSALGWMYLCKKARSTEKIYMIQWAKPVARSYARAHQFGAAPPPPSDERARSWCYQKSNLRSYRRPFSPCPIDTPSTSFFELRYWPRSTLKRFLALITNISTTKEQIRNSAYTTTPGNAAHPPSPQGFPDGYDTQVGEGGVQMSGGQKQRLAIARAVLKDPAIMLLDEATSALDSESEHLVQAALERVTKGRTSLIVAHRLSTVRSMADKICVLNKGEVVEVGTYDELASKPNGHFRRLVQYQL 2952
LARPE LIG + LL GT+ +SL P+VMGGLID VM G GT TP+EAAA+LM +F QS+ML GRS ++VAGER+AARLR F A+ Q+ AFFD N TG+LVNRLASDVLLVQ ++T+S AQGLR+ +V G + M+ +SP LAAVSVA+FP V G G +FGR++K QQK VQ ALAGSS VAEE + +I TVR F AE RE RYN KV+ S +A RVG+T+A F GSMH G HASL AVMA GG Q+ +GAL+VGDMTSFLLYSTF+A+N L VY+ MRA+GAS+RVM II AE GGG+A +A V G + F V F YPTRP VL G+ L+V+AG +LA+VG SGCGKST+ RLLTRLY+P +G + LDG+ +++L+ LR++ +G+V+QEPVLF SIADNIRYGRPEA+ EV AA VANA FI +SH GY TQ G G Q+SGGQ+QR+AIARAVLKDPA++LLDE +SALDS+SE VQ ALE VT+GRTS+I+AHRLST R+MADKI V++ G VVE G++DEL ++ G FRR+ Q+
Sbjct: 4 LARPEGRLIGSGLTLLAGTSCVSLAFPRVMGGLIDAVMGGAGTTTPYEAAAVLMGLFSLQSLMLVGRSAALSVAGERIAARLRRRLFQAVAKQDMAFFDANSTGELVNRLASDVLLVQKALTSSTAQGLRSLFLVTGSSVMMYTMSPYLAAVSVAIFPPVMGAGWYFGRKLKAQQKSVQAALAGSSGVAEEVIGSISTVRAFGAEQRECARYNTKVNDSCTLAARVGVTTAVFEGSMHLGAHASLVAVMAAGGAQLVAGALTVGDMTSFLLYSTFMALNVSGLGSVYADAMRAIGASDRVMDIIRGAEGEGER-----------------GGGSAGAVLAA-------VRGDIRFDGVQFLYPTRPEHQVLQGLALEVQAGKTLAVVGPSGCGKSTLCRLLTRLYEPSAGSVTLDGVDISSLDVLWLREKAVGIVDQEPVLFNASIADNIRYGRPEATDAEVVQAAKVANAHEFIT--------------------------------------------------------------QFSH-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GYQTQAGASGQQLSGGQRQRIAIARAVLKDPAVLLLDEFSSALDSDSEQRVQEALEHVTRGRTSIIIAHRLSTARAMADKIAVMDSGRVVESGSFDELMARDGGVFRRMYLTQV 573
BLAST of mRNA_P-fluviatile_contig1.250.1 vs. uniprot
Match: A0A7S1CN48_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CN48_9STRA) HSP 1 Score: 397 bits (1019), Expect = 1.320e-120 Identity = 278/860 (32.33%), Postives = 390/860 (45.35%), Query Frame = 1
Query: 379 RLLELARPERHLIGGAIGLLLGTTAISLTVPKVMGGLIDNVMQGTGTYTPWEAAAILMAMFGGQSIMLTGRSGLMTVAGERVAARLRNLAFGAMVVQETAFFDRNRTGDLVNRLASDVLLVQGSVTTSVAQGLRNGLMVVGCTGMLTHLSPELAAVSVAVFPLVAGVGVWFGRRMKKQQKKVQEALAGSSAVAEEALSNIRTVRQFSAEFREIKRYNEKVDISYQMATRVGITSAYFGGSMHFGGHASLCAVMALGGQQVASGALSVGDMTSFLLYSTFLAVNFGELTGVYSQIMRALGASERVMAIISSAEASSPMQPLQPSDAKSNRDAEGGGGGTANLEIAGGAKLGDKVAGSVVFKDVHFSYPTRPHSPVLHGMTLQVEAGSSLAIVGASGCGKSTVLRLLTRLYDPQSGRIELDGIPLNTLEPRGLRDRIGVVEQEPVLFGGSIADNIRYGRPEASKEEVEMAAAVANASGFIEASSDINHRRCFPRALPHTRGITRYLRGHGMQKGFHLSASSSSSASPAFVCASTKSRGHSALEPYSHMHNSGRGGLIFFCLREPEPRSEQQGAKRSQRSSSNIKRQSFSFWSEGPESASPIHQGGKGTRAASQLPFRSALGWMYLCKKARSTEKIYMIQWAKPVARSYARAHQFGAAPPPPSDERARSWCYQKSNLRSYRRPFSPCPIDTPSTSFFELRYWPRSTLKRFLALITNISTTKEQIRNSAYTTTPGNAAHPPSPQGFPDGYDTQVGEGGVQMSGGQKQRLAIARAVLKDPAIMLLDEATSALDSESEHLVQAALERVTKGRTSLIVAHRLSTVRSMADKICVLN-KGEVVEVGTYDELASKPNGHFRRLVQYQLL 2955
RL+ LARPE + LLGT+A+SL P +GG++D+ + + ++TPW+ A + A+F QS+++ R ++ ++GER+AARLR F A++ Q+ A+FDR+RTGD++NRL +DV +VQ S+T ++A GLRN + VG ML H++P LAAVS+ P +A + G +KK+Q VQEAL ++ VAEE +SNIRTVR F+ E E +RY + V Y+ + V I S+ G++HF + LC V+ GG V SG +SVGD+T+F+LY+T+ V+ L G + +M+ L AS R+ ++I S T ++ I+GG L + V G + +DV F YP+R VL+G +L + AG++ AI G SG GKSTV LL RLYDP+ G + LDG+ + L+P LR +IG V Q+P+LF SIA+NIRYG P A+ EVE AA ANA FI + FPDGYD+ VGE GVQ+SGGQ+QR++IARA+L DPAI+ LDEATSALD+ESEH VQ AL++V GRT + VAHRLS++++ AD I VL+ G V E+G YDEL +K G F+ LV QL+
Sbjct: 19 RLVSLARPEAARFAFVLASLLGTSAVSLAFPAAIGGVLDSAVAQSTSWTPWQVAGGMAALFAAQSVLMAVRGSVLKISGERIAARLRQALFDAIMRQDVAWFDRHRTGDVMNRLTADVQMVQNSLTNNIAMGLRNAFVGVGGVVMLVHMAPTLAAVSLVAIPPIALGWRYGGNIIKKRQLAVQEALGDTANVAEERVSNIRTVRVFAQELAEGRRYGDAVQTVYERSRGVAIASSILDGTVHFAVNLGLCGVIGYGGNMVLSGDMSVGDLTAFMLYATYCGVSLASLAGTFVDVMKGLSASTRIFSVIDS---------------------------TPSIPISGGRVL-ETVRGQLTLRDVDFRYPSRTDVQVLNGFSLDIPAGATCAIAGPSGSGKSTVAALLNRLYDPERGAVLLDGVDVRELDPSWLRRQIGTVSQDPILFSASIAENIRYGNPHATDAEVEEAARTANAHQFIVS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FPDGYDSLVGERGVQLSGGQRQRISIARAILGDPAIVCLDEATSALDAESEHAVQDALQKVMAGRTVVSVAHRLSSIKA-ADMIAVLDGSGRVAELGAYDELIAK-EGVFKDLVHRQLV 587
BLAST of mRNA_P-fluviatile_contig1.250.1 vs. uniprot
Match: A0A7S0THF0_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0THF0_HEMAN) HSP 1 Score: 387 bits (993), Expect = 1.090e-116 Identity = 291/858 (33.92%), Postives = 388/858 (45.22%), Query Frame = 1
Query: 379 RLLELARPERHLIGGAIGLLLGTTAISLTVPKVMGGLIDNVMQGTGTYTPWEAAAILMAMFGGQSIMLTGRSGLMTVAGERVAARLRNLAFGAMVVQETAFFDRNRTGDLVNRLASDVLLVQGSVTTSVAQGLRNGLMVVGCTGMLTHLSPELAAVSVAVFPLVAGVGVWFGRRMKKQQKKVQEALAGSSAVAEEALSNIRTVRQFSAEFREIKRYNEKVDISYQMATRVGITSAYFGGSMHFGGHASLCAVMALGGQQVASGALSVGDMTSFLLYSTFLAVNFGELTGVYSQIMRALGASERVMAIISSAEASSPMQPLQPSDAKSNRDAEGGGGGTANLEIAGGAKLGDKVAGSVVFKDVHFSYPTRPHSPVLHGMTLQVEAGSSLAIVGASGCGKSTVLRLLTRLYDPQSGRIELDGIPLNTLEPRGLRDRIGVVEQEPVLFGGSIADNIRYGRPEASKEEVEMAAAVANASGFIEASSDINHRRCFPRALPHTRGITRYLRGHGMQKGFHLSASSSSSASPAFVCASTKSRGHSALEPYSHMHNSGRGGLIFFCLREPEPRSEQQGAKRSQRSSSNIKRQSFSFWSEGPESASPIHQGGKGTRAASQLPFRSALGWMYLCKKARSTEKIYMIQWAKPVARSYARAHQFGAAPPPPSDERARSWCYQKSNLRSYRRPFSPCPIDTPSTSFFELRYWPRSTLKRFLALITNISTTKEQIRNSAYTTTPGNAAHPPSPQGFPDGYDTQVGEGGVQMSGGQKQRLAIARAVLKDPAIMLLDEATSALDSESEHLVQAALERVTK-GRTSLIVAHRLSTVRSMADKICVLNKGEVVEVGTYDELASKPNGHFRRLVQYQ 2949
R+L L PE+ L+ A+ ++ TT ISL P +G L+D TP A L+ +FG Q +M+T R G++TVAGER+AARLR F A++ Q+ +FFD RTG+L+NRLASD ++Q ++T +V L++ MVVGCT ML + SP+LA VSV V P V V+ GR MK++Q +VQ+ALA +S AEE +++++TVRQF+ E E RY + + Q+AT VGI + G +H + SL V+ GG V +G ++ G +TSFLLYS +L N G L+G+Y +M+A+GAS R+ +I+ +P P A +R T L GA+L D G V FKDV F YPTRP S +L G TL++E G + IVGASG GKST+ LLTRLYDP+ G + LDG + L LR + V QEPVLF SIADNIRYGR +A+ +EV A VANA FI FPDGYDT VGE G+Q+SGGQKQRLAIARA++K P ++LLDEATSALDSESE LV+ A+ERV+ G T + +AHRL+T+R AD IC++ KG+V E G+Y EL K NG F++LV+ Q
Sbjct: 26 RVLRLVEPEKRLLLLAMSTIVVTTPISLFFPMAVGKLLDVATTADPIITPVTVAGALLVVFGLQGLMMTTRDGMLTVAGERMAARLRRQTFEAVLRQDMSFFDETRTGELLNRLASDTSVIQKAITNNVTSALKSAGMVVGCTAMLIYTSPKLALVSVLVLPPGGIVAVYMGRFMKRKQSEVQDALAKTSQQAEEVITSMKTVRQFAREANEAARYGGMMAETRQLATSVGIANTLLGTGIHVAANISLACVLGYGGTLVVAGEMTAGVLTSFLLYSVYLGFNVGSLSGIYGDLMKAVGASLRIFSILD-------REPSLP--AYDSRH-------TTEL----GARL-DDFNGGVEFKDVVFRYPTRPQSAILQGFTLKMEPGQVIGIVGASGSGKSTIGALLTRLYDPEQGTVLLDGHNVKDLSAEWLRGVVASVPQEPVLFAVSIADNIRYGRLDATDDEVRRVAEVANAHEFISR---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FPDGYDTFVGERGMQLSGGQKQRLAIARALIKQPKVLLLDEATSALDSESEKLVEQAIERVSHAGMTVVKIAHRLNTIRD-ADVICMVVKGKVEEKGSYAELM-KSNGAFKQLVKNQ 599
BLAST of mRNA_P-fluviatile_contig1.250.1 vs. uniprot
Match: UPI0013D9933D (ABC transporter transmembrane domain-containing protein n=1 Tax=Pyxidicoccus trucidator TaxID=2709662 RepID=UPI0013D9933D) HSP 1 Score: 374 bits (960), Expect = 3.500e-112 Identity = 274/860 (31.86%), Postives = 382/860 (44.42%), Query Frame = 1
Query: 376 QRLLELARPERHLIGGAIGLLLGTTAISLTVPKVMGGLIDNVMQGTGTYTPWEAAAILMAMFGGQSIMLTGRSGLMTVAGERVAARLRNLAFGAMVVQETAFFDRNRTGDLVNRLASDVLLVQGSVTTSVAQGLRNGLMVVGCTGMLTHLSPELAAVSVAVFPLVAGVGVWFGRRMKKQQKKVQEALAGSSAVAEEALSNIRTVRQFSAEFREIKRYNEKVDISYQMATRVGITSAYFGGSMHFGGHASLCAVMALGGQQVASGALSVGDMTSFLLYSTFLAVNFGELTGVYSQIMRALGASERVMAIISSAEASSPMQPLQPSDAKSNRDAEGGGGGTANLEIAGGAKLGDKVAGSVVFKDVHFSYPTRPHSPVLHGMTLQVEAGSSLAIVGASGCGKSTVLRLLTRLYDPQSGRIELDGIPLNTLEPRGLRDRIGVVEQEPVLFGGSIADNIRYGRPEASKEEVEMAAAVANASGFIEASSDINHRRCFPRALPHTRGITRYLRGHGMQKGFHLSASSSSSASPAFVCASTKSRGHSALEPYSHMHNSGRGGLIFFCLREPEPRSEQQGAKRSQRSSSNIKRQSFSFWSEGPESASPIHQGGKGTRAASQLPFRSALGWMYLCKKARSTEKIYMIQWAKPVARSYARAHQFGAAPPPPSDERARSWCYQKSNLRSYRRPFSPCPIDTPSTSFFELRYWPRSTLKRFLALITNISTTKEQIRNSAYTTTPGNAAHPPSPQGFPDGYDTQVGEGGVQMSGGQKQRLAIARAVLKDPAIMLLDEATSALDSESEHLVQAALERVTKGRTSLIVAHRLSTVRSMADKICVLNKGEVVEVGTYDELASKPNGHFRRLVQYQLL 2955
+RLL LARPE + G LL ++A +L PK +GGL+D + A +++ +F Q + + R+ L AGERV +RLR F A++ QE AFFD RTG+L +RLASD ++Q +VT +++ LR + +G G+L + S L V +A+ P VA V +GRR++ ++VQ+ALA SS VAEE LS IRTVR F+AE E++RY VD ++ +A + S+ F G++ G+ + AV+ GG+ V G LSVG +TSFL+Y+ ++ +F + +++ MRA GA++RV ++ A IA G + +V G V F+DV F+YPTRP PVL G+ L++ G +A+VG SG GKST+ LL+R YDPQ G + LDG PL +L+P LR IG+V QEP LF SIADNIRYGRPE++ E+E AA ANA +I Q FP+GY TQVGE GVQ+SGGQKQR+AIARAVLKDP +++LDEATSALDSESEHLV+ ALER+ KGR++LI+AHRLSTV + AD++ VL G +++ GT+ L + +G +RRLV+ Q +
Sbjct: 19 RRLLALARPELASLVGGTFFLLVSSAATLAYPKAIGGLVDEALGSRSREMLDGLALMMLGVFVVQGVAMALRAYLFNTAGERVVSRLRKDLFRALLSQEVAFFDARRTGELTSRLASDTTVLQNTVTANISMALRYAVQALGGVGLLFYTSARLTGVMLAIIPAVAVGAVLYGRRVRHISRQVQDALAASSEVAEEDLSGIRTVRSFAAEPHEVERYGTAVDRAFMLARQRTFQSSVFMGAVSIAGYGGIAAVLWYGGRLVVDGNLSVGALTSFLIYTMLVSFSFSAMAELWADFMRASGAADRVFELLDRKPA-----------------------------IASGGERLPEVRGHVEFRDVRFAYPTRPDVPVLQGLNLELRPGEVVAVVGPSGAGKSTLASLLSRFYDPQGGAVLLDGHPLTSLDPEWLRRNIGMVAQEPQLFSCSIADNIRYGRPESTDAEIEEAARAANAHAYI---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QRFPEGYGTQVGERGVQLSGGQKQRVAIARAVLKDPRLLILDEATSALDSESEHLVKDALERLMKGRSTLIIAHRLSTVAN-ADRVLVLEGGLIIQSGTHAALMGQ-DGLYRRLVERQFV 586
BLAST of mRNA_P-fluviatile_contig1.250.1 vs. uniprot
Match: A0A6I2GXX0_9DELT (ATP-binding cassette domain-containing protein n=2 Tax=Cystobacterineae TaxID=80811 RepID=A0A6I2GXX0_9DELT) HSP 1 Score: 374 bits (959), Expect = 4.720e-112 Identity = 278/860 (32.33%), Postives = 387/860 (45.00%), Query Frame = 1
Query: 379 RLLELARPERH-LIGGAIGLLLGTTAISLTVPKVMGGLIDNVMQGTGTYTPWEAAAILMAMFGGQSIMLTGRSGLMTVAGERVAARLRNLAFGAMVVQETAFFDRNRTGDLVNRLASDVLLVQGSVTTSVAQGLRNGLMVVGCTGMLTHLSPELAAVSVAVFPLVAGVGVWFGRRMKKQQKKVQEALAGSSAVAEEALSNIRTVRQFSAEFREIKRYNEKVDISYQMATRVGITSAYFGGSMHFGGHASLCAVMALGGQQVASGALSVGDMTSFLLYSTFLAVNFGELTGVYSQIMRALGASERVMAIISSAEASSPMQPLQPSDAKSNRDAEGGGGGTANLEIAGGAKLGDKVAGSVVFKDVHFSYPTRPHSPVLHGMTLQVEAGSSLAIVGASGCGKSTVLRLLTRLYDPQSGRIELDGIPLNTLEPRGLRDRIGVVEQEPVLFGGSIADNIRYGRPEASKEEVEMAAAVANASGFIEASSDINHRRCFPRALPHTRGITRYLRGHGMQKGFHLSASSSSSASPAFVCASTKSRGHSALEPYSHMHNSGRGGLIFFCLREPEPRSEQQGAKRSQRSSSNIKRQSFSFWSEGPESASPIHQGGKGTRAASQLPFRSALGWMYLCKKARSTEKIYMIQWAKPVARSYARAHQFGAAPPPPSDERARSWCYQKSNLRSYRRPFSPCPIDTPSTSFFELRYWPRSTLKRFLALITNISTTKEQIRNSAYTTTPGNAAHPPSPQGFPDGYDTQVGEGGVQMSGGQKQRLAIARAVLKDPAIMLLDEATSALDSESEHLVQAALERVTKGRTSLIVAHRLSTVRSMADKICVLNKGEVVEVGTYDELASKPNGHFRRLVQYQLL 2955
RLL LARPER L+ G + L++G+ +SL P+ M +ID + AA + +F Q++ + R+ L AGERV RLR F +++ QE AFFD RTG+L +RLASD ++Q +V+T+++ GLRN VG +L + SP L + +A+ P VA V +GRR+++ K+VQ+ALA ++ VAEE L+ IRTVR F+AE E+ RY +V+ +Y++A R SA F G+ FGG+A+ V+ GG+ V G LSVG +TSFL+YS +A + G L +++ MRA GA+ERV ++ A P GG + +V G V F+ V F+YP+RP +PVL ++L + G +A+VG SG GKST+ LL RLYDPQ GR+ LDG PL L+P LR ++G+V QEP+LF S+A+NIRYGRP AS EVE AA A+A FI SH FP GY+T+VGE GVQ+SGGQKQR+AIARAVLKDP +++LDEATSALD+ESEHLV+ AL+ + +GRT+LI+AHRLSTV A ++ VL KG VV+ G++ L ++ +G +RRLV+ Q +
Sbjct: 18 RLLSLARPERRRLLWGTLFLVIGS-GMSLLYPQAMKLIIDEALGARSRQLIDRAALGMALIFAVQAVAVALRAYLFNTAGERVVTRLRQRLFASLMSQEVAFFDERRTGELTSRLASDTAVLQSTVSTNISMGLRNAATAVGAVALLFYTSPVLTLLMLAIVPAVAVGAVTYGRRVRRLSKEVQDALASANEVAEEGLAGIRTVRAFAAEPAEVARYGARVEHAYELARRRARQSATFLGAASFGGYAAAAIVLWYGGRLVVDGRLSVGGLTSFLVYSLLVAFSLGALADLWADFMRASGAAERVFELVDRTPAIPP----------------------------GGGERPSRVEGRVEFERVRFAYPSRPAAPVLQDVSLSLAPGEVVAVVGPSGAGKSTLAALLARLYDPQGGRLLLDGRPLAQLDPAWLRGQLGIVAQEPLLFSASLAENIRYGRPGASDAEVEAAARAAHAHEFI-----------------------------------------------------------------SH----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FPQGYETRVGERGVQLSGGQKQRVAIARAVLKDPRLLVLDEATSALDAESEHLVKDALDHLMRGRTTLIIAHRLSTVAG-AHRVLVLEKGRVVQSGSHQSLMAE-DGLYRRLVERQFV 585
BLAST of mRNA_P-fluviatile_contig1.250.1 vs. uniprot
Match: A0A085WV65_9DELT (Lipid A export ATP-binding/permease protein MsbA n=1 Tax=Hyalangium minutum TaxID=394096 RepID=A0A085WV65_9DELT) HSP 1 Score: 371 bits (953), Expect = 3.690e-111 Identity = 285/861 (33.10%), Postives = 387/861 (44.95%), Query Frame = 1
Query: 376 QRLLELARPE-RHLIGGAIGLLLGTTAISLTVPKVMGGLIDNVMQGTGTYTPWEAAAILMAMFGGQSIMLTGRSGLMTVAGERVAARLRNLAFGAMVVQETAFFDRNRTGDLVNRLASDVLLVQGSVTTSVAQGLRNGLMVVGCTGMLTHLSPELAAVSVAVFPLVAGVGVWFGRRMKKQQKKVQEALAGSSAVAEEALSNIRTVRQFSAEFREIKRYNEKVDISYQMATRVGITSAYFGGSMHFGGHASLCAVMALGGQQVASGALSVGDMTSFLLYSTFLAVNFGELTGVYSQIMRALGASERVMAIISSAEASSPMQPLQPSDAKSNRDAEGGGGGTANLEIAGGAKLGDKVAGSVVFKDVHFSYPTRPHSPVLHGMTLQVEAGSSLAIVGASGCGKSTVLRLLTRLYDPQSGRIELDGIPLNTLEPRGLRDRIGVVEQEPVLFGGSIADNIRYGRPEASKEEVEMAAAVANASGFIEASSDINHRRCFPRALPHTRGITRYLRGHGMQKGFHLSASSSSSASPAFVCASTKSRGHSALEPYSHMHNSGRGGLIFFCLREPEPRSEQQGAKRSQRSSSNIKRQSFSFWSEGPESASPIHQGGKGTRAASQLPFRSALGWMYLCKKARSTEKIYMIQWAKPVARSYARAHQFGAAPPPPSDERARSWCYQKSNLRSYRRPFSPCPIDTPSTSFFELRYWPRSTLKRFLALITNISTTKEQIRNSAYTTTPGNAAHPPSPQGFPDGYDTQVGEGGVQMSGGQKQRLAIARAVLKDPAIMLLDEATSALDSESEHLVQAALERVTKGRTSLIVAHRLSTVRSMADKICVLNKGEVVEVGTYDELASKPNGHFRRLVQYQLL 2955
+RLL LARPE R LI G L++G+ +SL P+ M +ID + + A + +F QS+ + R T AGERV RLR F +++ QE AFFD +TG+L NRLASD ++Q +V+ +++ LRNG+ +G ML + SP L V +AV P VA V++GR ++K K+VQ+ALA S+ VAEE+LS +RTVR F+AE E+ RY VD ++++A R S+ F F G A+ AV GG+ V G+L+VG +TSFL+YS F+A G LT +++ MRA GASERV ++ QP P ++GG +L G V +DV F+YP+RP PVL G+ L +E G ++AIVG SG GKST+ LL RLYDPQ G I LDG L L+P LR +IGVV QEP+LF SIADNIRYGR +A++ E+E AA ANA FI +R FP+GY+T VGE GVQ+SGGQKQR+AIARA+LKDP +++LDEATSALD+ESEHLV+ AL+R+ KGRT+LI+AHRLSTV AD++ VL G++V+ G++ L + +G +RRLV+ Q +
Sbjct: 20 RRLLSLARPETRTLIAGTFFLVVGS-GMSLLYPQKMRQIIDEALGARDRAMIDQIALGMAVIFAIQSVAVALRYYFFTTAGERVVTRLRQKLFSSLMSQEVAFFDERKTGELTNRLASDTTVLQNTVSANISMVLRNGVQALGGIAMLFYTSPALTLVMLAVVPPVAVGAVFYGRGVRKLSKEVQDALANSNEVAEESLSGVRTVRSFAAEKSEVARYRSAVDRAFELARRRIRQSSTFMAVASFCGFAAAAAVFWYGGRLVVDGSLTVGGLTSFLVYSMFVAFALGALTELWADFMRAAGASERVFELMD-------RQPTIP--------------------MSGGERLAH-TEGRVQLQDVRFTYPSRPDVPVLQGIELNIEPGEAVAIVGPSGSGKSTIASLLGRLYDPQGGHILLDGKDLKALDPEWLRQQIGVVAQEPLLFSSSIADNIRYGRADATQAEIEAAAKAANAHDFI---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MR------------------------------------------------------------------FPEGYNTLVGERGVQLSGGQKQRVAIARAMLKDPRLLILDEATSALDAESEHLVKEALDRLMKGRTTLIIAHRLSTVMD-ADRVMVLEGGKIVQSGSHSALMGQ-DGLYRRLVERQFV 588
BLAST of mRNA_P-fluviatile_contig1.250.1 vs. uniprot
Match: UPI001CED2937 (ABC transporter transmembrane domain-containing protein n=1 Tax=Myxococcus sp. RHSTA-1-4 TaxID=2874601 RepID=UPI001CED2937) HSP 1 Score: 370 bits (951), Expect = 4.060e-111 Identity = 280/861 (32.52%), Postives = 383/861 (44.48%), Query Frame = 1
Query: 376 QRLLELARPERHLIGGAIGLLLGTTAISLTVPKVMGGLIDNVMQGTGTYTPWEAAAILM-AMFGGQSIMLTGRSGLMTVAGERVAARLRNLAFGAMVVQETAFFDRNRTGDLVNRLASDVLLVQGSVTTSVAQGLRNGLMVVGCTGMLTHLSPELAAVSVAVFPLVAGVGVWFGRRMKKQQKKVQEALAGSSAVAEEALSNIRTVRQFSAEFREIKRYNEKVDISYQMATRVGITSAYFGGSMHFGGHASLCAVMALGGQQVASGALSVGDMTSFLLYSTFLAVNFGELTGVYSQIMRALGASERVMAIISSAEASSPMQPLQPSDAKSNRDAEGGGGGTANLEIAGGAKLGDKVAGSVVFKDVHFSYPTRPHSPVLHGMTLQVEAGSSLAIVGASGCGKSTVLRLLTRLYDPQSGRIELDGIPLNTLEPRGLRDRIGVVEQEPVLFGGSIADNIRYGRPEASKEEVEMAAAVANASGFIEASSDINHRRCFPRALPHTRGITRYLRGHGMQKGFHLSASSSSSASPAFVCASTKSRGHSALEPYSHMHNSGRGGLIFFCLREPEPRSEQQGAKRSQRSSSNIKRQSFSFWSEGPESASPIHQGGKGTRAASQLPFRSALGWMYLCKKARSTEKIYMIQWAKPVARSYARAHQFGAAPPPPSDERARSWCYQKSNLRSYRRPFSPCPIDTPSTSFFELRYWPRSTLKRFLALITNISTTKEQIRNSAYTTTPGNAAHPPSPQGFPDGYDTQVGEGGVQMSGGQKQRLAIARAVLKDPAIMLLDEATSALDSESEHLVQAALERVTKGRTSLIVAHRLSTVRSMADKICVLNKGEVVEVGTYDELASKPNGHFRRLVQYQLL 2955
+RLL LARPE ++ LL ++A SL P+ +G L+D + GT + + A+ M A+F Q + + R+ L AGERV ARLR F AM+ QE AFFD RTG+L +RLASD ++Q +VT +V+ LR + + G +L + S L V +A+ P V V +GRR++ ++VQ+ALA +S VAEE LS IRTVR F+AE E++RY +D + A ++ F G+ G+ ++ AV+ GG+ V +G LSVG++TSFL+Y+ +A +F L ++ MRA GAS+RV ++ A +P GG L +V G V F+DVHF+YPTRP PVL G+ L++ G +A+VG SG GKST+ LL+R YDPQ G + LDG PL +L+P LR IG+V QEP LF SIADNIRYGRP+A+ ++E AA ANA FI Q FP+GY TQVGE GVQ+SGGQKQR+AIARAVLKDP +++LDEATSALD+ESEHLV+ ALER+ KGRT+LI+AHRLSTV + AD++ VL G V++ GT+ L + +G +RRLV+ Q +
Sbjct: 2 RRLLSLARPELPVLAAGTFFLLVSSAASLAYPQAIGDLVDEAL-GTRSQQMLDGLALAMLAVFVVQGVAMALRAYLFNTAGERVVARLRKDLFRAMLSQEIAFFDGRRTGELTSRLASDTTVLQNTVTANVSMALRFTMQIAGGVALLFYTSARLTGVMLAIIPAVVLGAVLYGRRVRGISRQVQDALAAASNVAEEDLSGIRTVRSFAAEPNEVERYGTAMDRVFAFARARTRETSIFLGATSIAGYGAVAAVLWYGGRLVVAGGLSVGELTSFLIYTMLVAFSFSALAELWGDFMRASGASDRVFELLDREPAIAP----------------------------GGQSL-PEVRGHVEFRDVHFAYPTRPDVPVLQGVNLELRPGEVVAVVGPSGAGKSTLASLLSRFYDPQGGAVLLDGHPLTSLDPHWLRRNIGMVAQEPQLFSCSIADNIRYGRPDATDAQIEEAARAANAHAFI---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QRFPEGYQTQVGERGVQLSGGQKQRVAIARAVLKDPRLLILDEATSALDAESEHLVKDALERLMKGRTTLIIAHRLSTVAN-ADRVLVLEGGHVIQSGTHAALMGQ-DGLYRRLVERQFV 569
BLAST of mRNA_P-fluviatile_contig1.250.1 vs. uniprot
Match: UPI001C684320 (ATP-binding cassette sub-family B member 10, mitochondrial n=3 Tax=Neognathae TaxID=8825 RepID=UPI001C684320) HSP 1 Score: 383 bits (983), Expect = 1.970e-110 Identity = 304/936 (32.48%), Postives = 472/936 (50.43%), Query Frame = 1
Query: 370 QAQRLLELARPERHLIGGAIGLLLGTTAISLTVPKVMGGLIDNVMQGTG---TYTPWEAAAILMAMFGGQSIMLTGRSGLMTVAGERVAARLRNLAFGAMVVQETAFFDRNRTGDLVNRLASDVLLVQGSVTTSVAQGLRNGLMVVGCTGMLTHLSPELAAVSVAVFPLVAGVGVWFGRRMKKQQKKVQEALAGSSAVAEEALSNIRTVRQFSAEFREIKRYNEKVDISYQMATRVGITSAYFGGSMHFGGHASLCAVMALGGQQVASGALSVGDMTSFLLYSTFLAVNFGELTGVYSQIMRALGASERVMAIISSAEASSPMQPLQPSDAKSNRDAEGGGGGTANLEIAGGAKLG-DKVAGSVVFKDVHFSYPTRPHSPVLHGMTLQVEAGSSLAIVGASGCGKSTVLRLLTRLYDPQSGRIELDGIPLNTLEPRGLRDRIGVVEQEPVLFGGSIADNIRYGRPEASK---EEVEMAAAVANASGFIEASSDINHRRCFPRALPHTRGITRYLRGHGMQKGFHLS--------------ASSSSSASPAFVCASTKSR---GHSAL---EPYSHMHNSG-----RGGLIFFCLREPEPRSEQQGAKRS------------------QRSSSNIKRQSFSFWSEGPESASPIHQGGKGTRAAS---QLPFRSALGWMYLCKKA-RSTEKIYMIQWAKPVARSYARAHQFGAAPPPPSDER--ARSWCYQKSNLRSYRRPFSPCPIDTPSTSFFELRY----WPRSTLKRF--------LALITNIS--------TTKEQIRNSAYTTTPGNAAHPPSPQGFPDGYDTQVGEGGVQMSGGQKQRLAIARAVLKDPAIMLLDEATSALDSESEHLVQAALERVTKGRTSLIVAHRLSTVRSMADKICVLNKGEVVEVGTYDELASKPNGHFRRLVQYQ 2949
+++RLL LA PER + A+G L ++ I+++ P +G +ID + + T + A+L +F + R LM AG+R+ LR F +++ QETAFFD+ RTG+L+NRL+SD L+ SVT +++ GLR G GM+ +SP LAA ++V P +A + V +GR ++K K Q++LA ++ +AEE + NIRTVR F E EI++Y KVD Q+A + + A F G+ G+ + +V+ GG + S ++VG+++SFL+Y+ ++ ++ G L+ YS++M+ LGA R+ +I L G LG D G++ F+DV F+YPTRP + + +L + AGS +A+VG SG GKST++ LL RLYDP SG I +DG + L P R +IG V QEP+LF SIA+NI YG + S EE++ A +ANA+ FI R FP+ G L G ++ ++ A+S+ A ++ R G + L S + N+ G I C + + + G R Q ++ +++ S E + GG+ QLPF + L K R + +++A P + F + P S S + + + R + P T + F++R W R+ + ++ NI+ T E+I+ A NAA + FP G+DT VGE G+ +SGGQKQR+AIARA+LK+P I+LLDEATSALD+E+E+LVQ AL+R+ +GRT LI+AHRLST+++ AD + VL +G+++E G +++L + PNG FR+L+Q Q
Sbjct: 146 ESRRLLALAHPERWRLAAAVGFLTVSSVITMSAPFFLGKVIDVIYTNSSEDFTDSLTSLCALLSGIFLCGAAANATRVYLMQTAGQRIVKHLRTTMFSSILKQETAFFDKTRTGELINRLSSDTALLGRSVTENLSDGLRAGAQASVGVGMMFFVSPSLAAFVLSVVPPLAVLAVIYGRYLRKLTKMTQDSLAEATQLAEERIGNIRTVRAFGQEVAEIEKYTNKVDYVLQLAKKEALARAGFFGATGLSGNLIILSVLYKGGLLMGSAYMTVGELSSFLMYAFWVGISIGGLSSFYSELMKGLGAGGRLWELIER---------------------------KPQLPFNEGITLGKDTFRGALEFRDVEFAYPTRPETSIFKDFSLSIPAGSVMALVGPSGTGKSTIVSLLLRLYDPISGTITVDGFDIRQLNPLWFRTKIGTVSQEPILFSCSIAENIAYGAEDPSTVTAEEIQKVAEIANAASFI---------RDFPKGFDTVVGEKGILLSGGQKQRIAIARALLKNPKILLLDEATSALDAENEYLVQEALDRLMEGRTVLIIAHRLSTIQNADFVAVLGQGKILECGKHEDLLANPNGLFRKLMQKQAFLQNGDTFALDLQSREKDVLKENVCLSSFYSELMKGLGAGGRLWELIERKPQLPFNEGIT---LGKDTFRGALEFRDVEFAYPTRPETSIFKDFSLSIPAGSVMALVGPSGTGKSTIVSLLLRLYDPIS-GTITVDGFDIRQLNPLWFRTKIGTVSQEPILFSCSIAENIAYGAEDPSTVTAEEIQKVAEI---ANAAS--FIRDFPKGFDTVVGEKGILLSGGQKQRIAIARALLKNPKILLLDEATSALDAENEYLVQEALDRLMEGRTVLIIAHRLSTIQN-ADFVAVLGQGKILECGKHEDLLANPNGLFRKLMQKQ 1035
BLAST of mRNA_P-fluviatile_contig1.250.1 vs. uniprot
Match: UPI0019D6E71D (ABC transporter transmembrane domain-containing protein n=2 Tax=Pyxidicoccus TaxID=224458 RepID=UPI0019D6E71D) HSP 1 Score: 365 bits (936), Expect = 9.070e-109 Identity = 274/860 (31.86%), Postives = 380/860 (44.19%), Query Frame = 1
Query: 376 QRLLELARPERHLIGGAIGLLLGTTAISLTVPKVMGGLIDNVMQGTGTYTPWEAAAILMAMFGGQSIMLTGRSGLMTVAGERVAARLRNLAFGAMVVQETAFFDRNRTGDLVNRLASDVLLVQGSVTTSVAQGLRNGLMVVGCTGMLTHLSPELAAVSVAVFPLVAGVGVWFGRRMKKQQKKVQEALAGSSAVAEEALSNIRTVRQFSAEFREIKRYNEKVDISYQMATRVGITSAYFGGSMHFGGHASLCAVMALGGQQVASGALSVGDMTSFLLYSTFLAVNFGELTGVYSQIMRALGASERVMAIISSAEASSPMQPLQPSDAKSNRDAEGGGGGTANLEIAGGAKLGDKVAGSVVFKDVHFSYPTRPHSPVLHGMTLQVEAGSSLAIVGASGCGKSTVLRLLTRLYDPQSGRIELDGIPLNTLEPRGLRDRIGVVEQEPVLFGGSIADNIRYGRPEASKEEVEMAAAVANASGFIEASSDINHRRCFPRALPHTRGITRYLRGHGMQKGFHLSASSSSSASPAFVCASTKSRGHSALEPYSHMHNSGRGGLIFFCLREPEPRSEQQGAKRSQRSSSNIKRQSFSFWSEGPESASPIHQGGKGTRAASQLPFRSALGWMYLCKKARSTEKIYMIQWAKPVARSYARAHQFGAAPPPPSDERARSWCYQKSNLRSYRRPFSPCPIDTPSTSFFELRYWPRSTLKRFLALITNISTTKEQIRNSAYTTTPGNAAHPPSPQGFPDGYDTQVGEGGVQMSGGQKQRLAIARAVLKDPAIMLLDEATSALDSESEHLVQAALERVTKGRTSLIVAHRLSTVRSMADKICVLNKGEVVEVGTYDELASKPNGHFRRLVQYQLL 2955
+RLL LARPE I LL ++ +L P+ +G L+D + A ++A+F Q + + R+ AGERV ARLR FGA++ QE AFFD RTG+L +RLASD ++Q +VT +++ LR G+ +G +L + S L V +A+ P V V++GRR++ ++VQ+ALA S+ VAEE LS IRTVR F+AE E++RY VD S+ +A SA F G++ G+ + V+ GG+ V G LSVG +TSFL+Y+ +A +F + +++ MRA GA++RV ++ +P+ A +GGA+L +V G V F+DV F+YPTR VL G+ L++ G +A+VG SG GKST+ LL+R YDPQ G + LDG PL +L+P LR IG+V QEP LF SIADNIRYGRP+A+ +VE AA ANA +I Q FP+GY TQVGE GVQ+SGGQKQR+AIARAVLKDP +++LDEATSALD+ESEHLV+ ALER+ KGRT+LI+AHRLSTV + AD++ VL G V++ GT+ L + +G +RRLV+ Q +
Sbjct: 19 RRLLTLARPELPFIIAGTVFLLVSSVSTLVYPRAIGNLVDEALSTRSQEMLDGLALTMLAVFVVQGVAMALRAYYFNTAGERVVARLRKSLFGALLSQEVAFFDARRTGELTSRLASDTTVLQNTVTANISMALRYGVQALGGVALLFYTSARLTGVMLAIIPAVTMGAVFYGRRVRVISRQVQDALADSTNVAEEDLSGIRTVRSFAAERNELERYGAAVDRSFSLARERTRQSAIFMGAVSIAGYGGIAVVLWYGGRLVVQGQLSVGALTSFLIYTMLVAFSFSAMAELWADFMRASGAADRVFELMD----------REPAIA------------------SGGAQL-PEVRGHVEFRDVRFAYPTRSDITVLQGLNLELRPGEVVAVVGPSGAGKSTLASLLSRFYDPQGGAVLLDGHPLTSLDPEWLRRNIGMVAQEPQLFSCSIADNIRYGRPDATDAQVEEAARAANAHAYI---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QRFPEGYGTQVGERGVQLSGGQKQRVAIARAVLKDPRLLILDEATSALDAESEHLVKDALERLMKGRTTLIIAHRLSTVAN-ADRVLVLEGGHVIQSGTHSALMGQ-DGLYRRLVERQFV 586 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.250.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig1.250.1 >prot_P-fluviatile_contig1.250.1 ID=prot_P-fluviatile_contig1.250.1|Name=mRNA_P-fluviatile_contig1.250.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=987bp MLRPVYRYALHYSSAFASPSRPHRPPHRGLTRSIFHAASVVREAALDPGLback to top mRNA from alignment at P-fluviatile_contig1:3078336..3092484+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig1.250.1 ID=mRNA_P-fluviatile_contig1.250.1|Name=mRNA_P-fluviatile_contig1.250.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=14149bp|location=Sequence derived from alignment at P-fluviatile_contig1:3078336..3092484+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig1:3078336..3092484+ >mRNA_P-fluviatile_contig1.250.1 ID=mRNA_P-fluviatile_contig1.250.1|Name=mRNA_P-fluviatile_contig1.250.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=5922bp|location=Sequence derived from alignment at P-fluviatile_contig1:3078336..3092484+ (Porterinema fluviatile SAG_2381)back to top |