mRNA_P-fluviatile_contig1.249.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig1.249.1
Unique NamemRNA_P-fluviatile_contig1.249.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig1.249.1 vs. uniprot
Match: D7FK62_ECTSI (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK62_ECTSI)

HSP 1 Score: 426 bits (1094), Expect = 2.800e-145
Identity = 228/307 (74.27%), Postives = 245/307 (79.80%), Query Frame = 3
Query:  321 PLPSAAQRDFHRHASTA--TXXXXXXXXXVSGPAEKRVLYGGHQPTSPLQRTAMAGWAAATALMDPERADMVATLGEVTGRLALEQLYRCMLADPEGREILRARPVINEATVDLAALAALPSGTFGKSYSNFMKGNNFSPDSRSAVQYVDDPDLAYVMRSRYREVHDLWHVLSGLAPSVEGELALKWFELVQTGLPVCALGAVVGPLALPRREPAATAASSSPIHGRDTGSXXXXXXXXXXXXXKRQGSREVLARTYVPWAIRAGRRARKPLICVWYERRWEQPLEQVRRELGVEAAPRRGKAGEAP 1235
            P PS  Q    R AST   +          SGPA KRVLY GHQPTSPLQRTAMAGWA  TALMDPERADMVATLGEVTGRLALEQLYR MLADPEGREILRARPVINEATVDLAALAALP GT GKSYSNFMK NNFSPD RS V+YVDDPDLAYVMR RYREVHDLWH L+GL  +VEGELALKWFELVQTGLPVCAL AV+GPLALP +EP A   +++P     +GS             KR+GSREVLART+VPWAIRAGRRAR+PL+CVWYE+RWEQPLE VRR+LGVE AP+RGK GEAP
Sbjct:   52 PRPSPFQHGSRRPASTTIGSGDSTTANTTASGPAAKRVLYSGHQPTSPLQRTAMAGWATVTALMDPERADMVATLGEVTGRLALEQLYRSMLADPEGREILRARPVINEATVDLAALAALPDGTLGKSYSNFMKENNFSPDGRSPVKYVDDPDLAYVMR-RYREVHDLWHALTGLPATVEGELALKWFELVQTGLPVCALSAVLGPLALPSKEPPAP--TTTPSXXXSSGSGR-----------KRRGSREVLARTFVPWAIRAGRRARRPLVCVWYEKRWEQPLELVRRDLGVEMAPQRGKGGEAP 344          
BLAST of mRNA_P-fluviatile_contig1.249.1 vs. uniprot
Match: A0A6H5K3Y3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Y3_9PHAE)

HSP 1 Score: 255 bits (651), Expect = 7.540e-81
Identity = 145/248 (58.47%), Postives = 155/248 (62.50%), Query Frame = 3
Query:  474 MAGWAAATALMDPERADMVATLGEVTGRLALEQLYRCMLADPEGREILRARPVINEATVDLAALAALPSGTFGKSYSNFMKGNNFSPDSRSAVQYVDDPDLAYVMRSRYREVHDLWHVLSGLAPSVEGELALKWFELVQTGLPVCALGAVVGPLALPRREPAATAASSSPIHGRDTGSXXXXXXXXXXXXXKRQGSREVLARTYVPWAIRAGRRARKPLICVWYERRWEQPLEQVRRELGVEAAPRRG 1217
            MAGWA  TALMDPERADMVATLGEVTGRLALEQLYR MLADPEGREILRARPVINEATVDLAALAALP GT GKSYSNFMK NNFSPD RS V+YVDDPDLAYVMRS                    G    KW                                                           +GSREVLART++PWA+RAGRRAR+PL+CVWYE+RWEQPLE VRR+LGVE AP+RG
Sbjct:    1 MAGWATVTALMDPERADMVATLGEVTGRLALEQLYRSMLADPEGREILRARPVINEATVDLAALAALPDGTLGKSYSNFMKENNFSPDGRSPVKYVDDPDLAYVMRSG-------------------GGGGGKW-----------------------------------------------------------RGSREVLARTFIPWAVRAGRRARRPLVCVWYEKRWEQPLELVRRDLGVEMAPQRG 170          
BLAST of mRNA_P-fluviatile_contig1.249.1 vs. uniprot
Match: A0A835Z0M6_9STRA (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0M6_9STRA)

HSP 1 Score: 248 bits (634), Expect = 3.350e-77
Identity = 138/269 (51.30%), Postives = 170/269 (63.20%), Query Frame = 3
Query:  402 VSGPAEKRVLYGGHQPTSPLQRTAMAGWAAATALMDPERADMVATLGEVTGRLALEQLYRCMLADPEGREILRARPVINEATVDLAALAALPSGTFGKSYSNFMKGNNFSPDSRSAVQYVDDPDLAYVMRSRYREVHDLWHVLSGLAPSVEGELALKWFELVQTGLPVCALGAVVGPLALPRREPAATAASSSPIHGRDTGSXXXXXXXXXXXXXKRQGSREVLARTYVPWAIRAGRRARKPLICVWYERRWEQPLEQVRRELGVEAAP 1208
             +G   KR+LY GH P SP QR  +   +A +A  DPERADMVA LGE TG  AL+Q++  ML DP+G E+LR RP ++E +VDL AL  LPSGTFGK+Y++FM  N F+PDSR  V++VDD DLAYVM +RYR+VHDLWHVLSGL PS+EGE+ALKWFE+VQTGLPV A+ A+VG   +PR                                      R  L +  VPWAIRAGRR+  PL+ VWYER W+  L   R +L  E AP
Sbjct:   14 AAGEPCKRILYKGHNPISPSQRVGLTFISAFSAFADPERADMVAALGETTGHRALKQMHHRMLQDPDGIELLRERPQLDEHSVDLEALGQLPSGTFGKAYADFMAHNQFTPDSRLPVRFVDDADLAYVM-ARYRQVHDLWHVLSGLPPSLEGEIALKWFEMVQTGLPVAAISALVGAARVPRE------------------------------------GRAALRQKLVPWAIRAGRRS-VPLMNVWYERYWDMYLSNFREKLKFEPAP 244          
BLAST of mRNA_P-fluviatile_contig1.249.1 vs. uniprot
Match: W7U2W9_9STRA (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U2W9_9STRA)

HSP 1 Score: 230 bits (587), Expect = 2.900e-69
Identity = 126/260 (48.46%), Postives = 163/260 (62.69%), Query Frame = 3
Query:  429 LYGGHQPTSPLQRTAMAGWAAATALMDPERADMVATLGEVTGRLALEQLYRCMLADPEGREILRARPVINEATVDLAALAALPSGTFGKSYSNFMKGNNFSPDSRSAVQYVDDPDLAYVMRSRYREVHDLWHVLSGLAPSVEGELALKWFELVQTGLPVCALGAVVGPLALPRREPAATAASSSPIHGRDTGSXXXXXXXXXXXXXKRQGSREVLARTYVPWAIRAGRRARKPLICVWYERRWEQPLEQVRRELGVEAAP 1208
            LY  H PTS  Q+  +AG++AATA  DPER DMVA LGE TG  AL++L R M ADP GRE+L A+P I E +     L  LP GTFG+ Y+ F+  + +SPD R+AV++VDD +LA+VM+ RYR+VHD WHVL GL P+V GELALKWFE+VQT LP+ A   VVGPL+L  +E                                    R++L   Y+PWA+RA  +AR PL+CVWYER +E+PLE +R+ L +  AP
Sbjct:   84 LYSSHIPTSGFQKLYIAGFSAATAFRDPERGDMVAALGETTGTRALQRLRRAMSADPVGRELLAAKPDIKEDSTRPDRLRRLPEGTFGREYARFLDHHGYSPDERAAVRFVDDAELAFVMQ-RYRQVHDFWHVLCGLPPTVLGELALKWFEMVQTRLPIAAFSGVVGPLSLSAQE------------------------------------RKLLKEQYIPWAVRAAVKAR-PLMCVWYERSFEEPLELMRKRLQIVTAP 305          
BLAST of mRNA_P-fluviatile_contig1.249.1 vs. uniprot
Match: A0A6T5QVX1_HETAK (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5QVX1_HETAK)

HSP 1 Score: 225 bits (574), Expect = 6.580e-68
Identity = 127/260 (48.85%), Postives = 156/260 (60.00%), Query Frame = 3
Query:  429 LYGGHQPTSPLQRTAMAGWAAATALMDPERADMVATLGEVTGRLALEQLYRCMLADPEGREILRARPVINEATVDLAALAALPSGTFGKSYSNFMKGNNFSPDSRSAVQYVDDPDLAYVMRSRYREVHDLWHVLSGLAPSVEGELALKWFELVQTGLPVCALGAVVGPLALPRREPAATAASSSPIHGRDTGSXXXXXXXXXXXXXKRQGSREVLARTYVPWAIRAGRRARKPLICVWYERRWEQPLEQVRRELGVEAAP 1208
            LY  HQPTS  Q+  +A ++A  AL DPERADMVA L E TG +AL  L   M ADP G++IL  +P+++E TV+L  L +LP GTFG +Y  FM GN FSP+ R+ V++VDD +LAYV+  RYR+VHDLWH L GL P+V GELALKW EL+QTGLPV AL A  GPLAL   +                                    R +L R Y+PWA+RA    R PL+CV YE  W +PL  VR  LGV  AP
Sbjct:   32 LYPTHQPTSTFQKGFLAVYSALVALNDPERADMVAVLSETTGEIALRNLRDVMKADPVGQQILLEKPILDETTVNLENLGSLPRGTFGHAYYTFMDGNGFSPEGRAPVRFVDDAELAYVLL-RYRQVHDLWHALFGLPPTVGGELALKWLELLQTGLPVAALSAAAGPLALAPAD------------------------------------RALLRRVYLPWALRAHGALRAPLMCVRYEALWGEPLAAVRARLGVLPAP 254          
BLAST of mRNA_P-fluviatile_contig1.249.1 vs. uniprot
Match: K3XAS5_GLOUD (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XAS5_GLOUD)

HSP 1 Score: 215 bits (548), Expect = 8.550e-64
Identity = 127/285 (44.56%), Postives = 161/285 (56.49%), Query Frame = 3
Query:  354 RHASTATXXXXXXXXXVSGPAEKRVLYGGHQPTSPLQRTAMAGWAAATALMDPERADMVATLGEVTGRLALEQLYRCMLADPEGREILRARPVINEATVDLAALAALPSGTFGKSYSNFMKGNNFSPDSRSAVQYVDDPDLAYVMRSRYREVHDLWHVLSGLAPSVEGELALKWFELVQTGLPVCALGAVVGPLALPRREPAATAASSSPIHGRDTGSXXXXXXXXXXXXXKRQGSREVLARTYVPWAIRAGRRARKPLICVWYERRWEQPLEQVRRELGVEAAP 1208
            R  S A           +G  +KRVLY  H PTSP+Q+  ++ ++A +   DPER DM+A LGEVTGR AL Q++  M +DP G  IL  RP I    +D+  L ALP  TFG +YS FM  + F  D R+ V+YVDD +LAYVM+ R+RE+HD WHVL GL P+V GE+ALK+ EL+QT LPVCAL   VGPL L   E                                    R VL R Y+PWA RAGR A   L+ V YE  +E PLE++R+ L +E AP
Sbjct:   28 RPLSAAAATASSPLGSAAGEPQKRVLYDTHMPTSPVQKVFLSVFSALSVFTDPERGDMLALLGEVTGRDALRQVHAKMCSDPVGVRILTERPSIRSDQIDMTYLRALPKHTFGYAYSQFMDSHGFEADGRAYVKYVDDEELAYVMK-RHRELHDFWHVLFGLPPTVFGEIALKYVELLQTKLPVCALSGFVGPLRLTSEE------------------------------------RRVLVRDYIPWANRAGRNAHF-LLSVMYEEEFETPLEELRQRLRIEVAP 274          
BLAST of mRNA_P-fluviatile_contig1.249.1 vs. uniprot
Match: A0A151MFC8_ALLMI (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=4 Tax=Crocodylia TaxID=1294634 RepID=A0A151MFC8_ALLMI)

HSP 1 Score: 209 bits (532), Expect = 6.290e-62
Identity = 116/256 (45.31%), Postives = 155/256 (60.55%), Query Frame = 3
Query:  429 LYGGHQPTSPLQRTAMAGWAAATALMDPERADMVATLGEVTGRLALEQLYRCMLADPEGREILRARPVINEATVDLAALAALPSGTFGKSYSNFMKGNNFSPDSRSAVQYVDDPDLAYVMRSRYREVHDLWHVLSGLAPSVEGELALKWFELVQTGLPVCALGAVVGPLALPRREPAATAASSSPIHGRDTGSXXXXXXXXXXXXXKRQGSREVLARTYVPWAIRAGRRARKPLICVWYERRWEQPLEQVRRELGV 1196
            LY GH PTSPLQ+  +A  +A  AL DP R DMVA LGE TG LAL++L   M  D EG +ILR RP I  +T+D+A L  LP GTFG+ Y  F++ N  SPD+R   ++VDD +LAYV++ RYREVHDL H L G+  ++ GE+ +KWFE VQTGLP+CALGAV GP+ L  R+                                     +VL    +PWA+++G RA   ++ ++YERRWEQ +E +R E+G+
Sbjct:    9 LYPGHVPTSPLQKVLLAAGSALAALRDPYRHDMVAVLGETTGSLALQRLRDKMRHDAEGYQILRERPRIRLSTLDVAGLRGLPDGTFGREYMRFLEDNRVSPDTRMPAKFVDDEELAYVIQ-RYREVHDLMHTLLGMPTNMLGEVVVKWFEAVQTGLPMCALGAVFGPIRLKARK------------------------------------LQVLTTELIPWAVQSGLRA-NCILNIYYERRWEQTVESLREEIGI 226          
BLAST of mRNA_P-fluviatile_contig1.249.1 vs. uniprot
Match: A0A1Y1YE21_9FUNG (Ubiquinone biosynthesis protein COQ4, mitochondrial n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YE21_9FUNG)

HSP 1 Score: 210 bits (534), Expect = 6.640e-62
Identity = 121/261 (46.36%), Postives = 155/261 (59.39%), Query Frame = 3
Query:  429 LYGGHQPTSPLQRTAMAGWAAATALMDPERADMVATLGEVTGRLALEQLYRCMLADPEGREILRARPVINEATVDLAALAALPSGTFGKSYSNFMKGNNFSPDSRSAVQYVDDPDLAYVMRSRYREVHDLWHVLSGLAPSVEGELALKWFELVQTGLPVCALGAVVGPLALPRREPAATAASSSPIHGRDTGSXXXXXXXXXXXXXKRQGSREVLARTYVPWAIRAGRRARKPLICVWYERRWEQPLEQVRRELGVEAAPR 1211
            LY GH PTSPL++ A++  AA TAL +P R DMVA LGE TG + L ++   ML DP GR ILR RPV+N  T++L  L  LP GTFG+ Y  ++     +PD+R+ V YVDDP+LAYV+R RYRE HD +H L+G+  SVE ELALKWFE  QTGLP+  LG+V GPL LP  E                                    R+ L   YVPWAIR G  A K L+ V YE  +++PL++ R+ELG+   P+
Sbjct:   45 LYEGHIPTSPLEKGALSVKAAFTALFNPLRGDMVAVLGETTGSMVLARIRDKMLLDPVGRRILRERPVLNSKTLNLPGLRTLPDGTFGREYVRWLDEQQVTPDTRAPVHYVDDPELAYVIR-RYRETHDFYHALTGIGISVEDELALKWFEFAQTGLPMTLLGSVFGPLRLPSVE------------------------------------RKHLFEVYVPWAIRCGSNA-KFLMNVMYEESFDKPLDEFRKELGIYLPPK 267          
BLAST of mRNA_P-fluviatile_contig1.249.1 vs. uniprot
Match: A0A8D2LU00_VARKO (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=2 Tax=Varanus komodoensis TaxID=61221 RepID=A0A8D2LU00_VARKO)

HSP 1 Score: 207 bits (528), Expect = 1.820e-61
Identity = 118/256 (46.09%), Postives = 154/256 (60.16%), Query Frame = 3
Query:  429 LYGGHQPTSPLQRTAMAGWAAATALMDPERADMVATLGEVTGRLALEQLYRCMLADPEGREILRARPVINEATVDLAALAALPSGTFGKSYSNFMKGNNFSPDSRSAVQYVDDPDLAYVMRSRYREVHDLWHVLSGLAPSVEGELALKWFELVQTGLPVCALGAVVGPLALPRREPAATAASSSPIHGRDTGSXXXXXXXXXXXXXKRQGSREVLARTYVPWAIRAGRRARKPLICVWYERRWEQPLEQVRRELGV 1196
            LY GH PTSPLQ+  +A  +A  AL +P R DMVA LGE TG LAL+ L   M  DPEGR IL+ RP I+ +TVD+A L ALP GTFG+ Y  F+  N  SPD+R  V++VDD +LAYV++ RYREVHDL H L G+  ++ GE+ +KWFE VQTGLP+C LGAV GP+ L  R+                                      +L    +PWA+R+G  A   ++ V+YE RWEQ +E +RRE+G+
Sbjct:    9 LYPGHIPTSPLQKGLLAAGSAFMALYNPYRHDMVAVLGETTGYLALQNLREKMRKDPEGRRILQERPRISLSTVDIAGLRALPDGTFGREYVRFLDDNRVSPDTRMPVKFVDDEELAYVIQ-RYREVHDLMHTLLGMRTNMLGEIVVKWFEAVQTGLPMCILGAVFGPVRLNPRKLL------------------------------------ILTTELIPWAVRSGSHA-SCILNVYYEERWEQTVEGLRREIGI 226          
BLAST of mRNA_P-fluviatile_contig1.249.1 vs. uniprot
Match: R7TTR9_CAPTE (Uncharacterized protein (Fragment) n=1 Tax=Capitella teleta TaxID=283909 RepID=R7TTR9_CAPTE)

HSP 1 Score: 207 bits (527), Expect = 2.410e-61
Identity = 116/272 (42.65%), Postives = 164/272 (60.29%), Query Frame = 3
Query:  432 YGGHQPTSPLQRTAMAGWAAATALMDPERADMVATLGEVTGRLALEQLYRCMLADPEGREILRARPVINEATVDLAALAALPSGTFGKSYSNFMKGNNFSPDSRSAVQYVDDPDLAYVMRSRYREVHDLWHVLSGLAPSVEGELALKWFELVQTGLPVCALGAVVGPLALPRREPAATAASSSPIHGRDTGSXXXXXXXXXXXXXKRQGSREV---LARTYVPWAIRAGRRARKPLICVWYERRWEQPLEQVRRELGVEAAPRRGKAGEAPA 1238
            Y  H PTS  Q+  ++  +AA A+ +P R DM+AT+GE TG LA++Q+ + MLADP GR+IL  +P IN +TVDLA L +LP G FG+ Y  +++ NN SPD R  V +VDDP LAYVM +RYREVHDL+H + G+  ++ GE+ +KWFE +QTGLP+CALGA+ GPL L                                      G + V   +  T++ WAIR GR A K ++CV++E+ WEQ +E++RRE  +E  P   +  + P+
Sbjct:    1 YPTHIPTSFFQKALLSVGSAAMAITNPWRGDMIATMGETTGYLAIKQMKQKMLADPVGRQILEEQPRINTSTVDLAYLKSLPDGAFGREYVRWLEDNNASPDERMPVSFVDDPQLAYVM-TRYREVHDLFHTILGMPTNMLGEITVKWFEAIQTGLPMCALGALFGPLRL--------------------------------------GPKSVVFFIQSTHLWWAIRNGRNA-KCMMCVYFEKHWEQSVEEMRREFNIEEPPHTPQKAKIPS 232          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.249.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FK62_ECTSI2.800e-14574.27Ubiquinone biosynthesis protein COQ4 homolog, mito... [more]
A0A6H5K3Y3_9PHAE7.540e-8158.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z0M6_9STRA3.350e-7751.30Ubiquinone biosynthesis protein COQ4 homolog, mito... [more]
W7U2W9_9STRA2.900e-6948.46Ubiquinone biosynthesis protein COQ4 homolog, mito... [more]
A0A6T5QVX1_HETAK6.580e-6848.85Ubiquinone biosynthesis protein COQ4 homolog, mito... [more]
K3XAS5_GLOUD8.550e-6444.56Ubiquinone biosynthesis protein COQ4 homolog, mito... [more]
A0A151MFC8_ALLMI6.290e-6245.31Ubiquinone biosynthesis protein COQ4 homolog, mito... [more]
A0A1Y1YE21_9FUNG6.640e-6246.36Ubiquinone biosynthesis protein COQ4, mitochondria... [more]
A0A8D2LU00_VARKO1.820e-6146.09Ubiquinone biosynthesis protein COQ4 homolog, mito... [more]
R7TTR9_CAPTE2.410e-6142.65Uncharacterized protein (Fragment) n=1 Tax=Capitel... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:3074915..3078232 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score431.0
Seed ortholog evalue5.4e-118
Seed eggNOG ortholog2880.D7FK62
Preferred nameCOQ4
KEGG koko:K18586
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016020,GO:0019866,GO:0019898,GO:0031090,GO:0031312,GO:0031314,GO:0031966,GO:0031967,GO:0031975,GO:0032991,GO:0042180,GO:0042181,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663
EggNOG free text desc.ubiquinone biosynthetic process
EggNOG OGsCOG5031@1,KOG3244@2759
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000
Hectar predicted targeting categorymitochondrion
Ec32 ortholog descriptionUbiquinone biosynthesis protein Coq4
Ec32 orthologEc-04_005680.1
Exons5
Model size1250
Cds size1092
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.249.1prot_P-fluviatile_contig1.249.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig1 3074915..3078074 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815311.9722865-CDS-P-fluviatile_contig1:3074914..30753711622815311.9722865-CDS-P-fluviatile_contig1:3074914..3075371Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3074915..3075371 -
1693561468.2439668-CDS-P-fluviatile_contig1:3074914..30753711693561468.2439668-CDS-P-fluviatile_contig1:3074914..3075371Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3074915..3075371 -
1622815311.9838753-CDS-P-fluviatile_contig1:3075963..30760881622815311.9838753-CDS-P-fluviatile_contig1:3075963..3076088Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3075964..3076088 -
1693561468.2571225-CDS-P-fluviatile_contig1:3075963..30760881693561468.2571225-CDS-P-fluviatile_contig1:3075963..3076088Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3075964..3076088 -
1622815311.9987717-CDS-P-fluviatile_contig1:3076738..30768261622815311.9987717-CDS-P-fluviatile_contig1:3076738..3076826Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3076739..3076826 -
1693561468.2696154-CDS-P-fluviatile_contig1:3076738..30768261693561468.2696154-CDS-P-fluviatile_contig1:3076738..3076826Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3076739..3076826 -
1622815312.0102427-CDS-P-fluviatile_contig1:3077104..30775191622815312.0102427-CDS-P-fluviatile_contig1:3077104..3077519Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3077105..3077519 -
1693561468.2781394-CDS-P-fluviatile_contig1:3077104..30775191693561468.2781394-CDS-P-fluviatile_contig1:3077104..3077519Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3077105..3077519 -
1622815312.025474-CDS-P-fluviatile_contig1:3078067..30780741622815312.025474-CDS-P-fluviatile_contig1:3078067..3078074Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3078068..3078074 -
1693561468.3880186-CDS-P-fluviatile_contig1:3078067..30780741693561468.3880186-CDS-P-fluviatile_contig1:3078067..3078074Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3078068..3078074 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815312.0341594-UTR-P-fluviatile_contig1:3078074..30782321622815312.0341594-UTR-P-fluviatile_contig1:3078074..3078232Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 3078075..3078232 -
1693561468.401658-UTR-P-fluviatile_contig1:3078074..30782321693561468.401658-UTR-P-fluviatile_contig1:3078074..3078232Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 3078075..3078232 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig1.249.1

>prot_P-fluviatile_contig1.249.1 ID=prot_P-fluviatile_contig1.249.1|Name=mRNA_P-fluviatile_contig1.249.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=364bp
MKGSSLRYRTVRLVASWPPTGAARDFALEAATQPAAAAASATARFGSKSS
PWQRPLPSAAQRDFHRHASTATASSSGGGGGVSGPAEKRVLYGGHQPTSP
LQRTAMAGWAAATALMDPERADMVATLGEVTGRLALEQLYRCMLADPEGR
EILRARPVINEATVDLAALAALPSGTFGKSYSNFMKGNNFSPDSRSAVQY
VDDPDLAYVMRSRYREVHDLWHVLSGLAPSVEGELALKWFELVQTGLPVC
ALGAVVGPLALPRREPAATAASSSPIHGRDTGSSGGGGSSSASGGGKRQG
SREVLARTYVPWAIRAGRRARKPLICVWYERRWEQPLEQVRRELGVEAAP
RRGKAGEAPAPPR*
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mRNA from alignment at P-fluviatile_contig1:3074915..3078232-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig1.249.1 ID=mRNA_P-fluviatile_contig1.249.1|Name=mRNA_P-fluviatile_contig1.249.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3318bp|location=Sequence derived from alignment at P-fluviatile_contig1:3074915..3078232- (Porterinema fluviatile SAG_2381)
ATGCAGCTTGGGCGTCAGCCGACAACACCGCCACCCGCTCTCCTGGCCAT CTCTCGCTCTCCCGCGCATCCTCCCTGTTGTGACGGGAAAAAGTAATTGC CGATCTTGCAAGAGCCCTCACAAGCTTGTGCTTAGATTGCAATTGGACGG TTCAAACGATGAAAGGTGTGTGAGTGTTAGCGAGCGCAGGACGAAAGTCT CGCCGCACTATTTCCACGTCCATGTTCGTCAAGTGCATGTTGCTGGTCGA TGCTGCTTGATCGGTTCGGGCGTGTCCTTGGCATGAGTCGAGATATTTGG CCTATGGCCTCTCAATCATCGTCATTTGGGCTCCATCGGTCAAGTGCCGA TGCCCATCGTACGTCATTTGACTCAGTTTATCACCGCCTCCCCTCTGGAT TCCGGCGGAAGAAACCTAGCTTTTCGCTGGACGCGTTGTACAAAGTGCTG CCAGGTTCTCGTGGCTGTCCGAACACTTTGATATATTCAGCAAGGTCTTC TGTTGACTCCTGTTTGCTGCTCCTCGATAGTTGTGCAGTGTGGTTTAGGT GGGCATGGAAATGTTCCACGAGTCGTTCACGCGGCAACGGTTGGCACCTT CTACCTCGCACACACTGCTGTGCATGCTGCACGCGCTTTTGACGCTGATC TCTGACACCAGGGCGACGTTGCACACATCTCACGCTACCTCTTTCTCTCC CTCATTGCTGCAGGGTCGTCTCTCCGCTATCGGACAGTCCGCCTGGTGGC CTCGTGGCCGCCGACAGGAGCGGCGCGCGATTTCGCCTTGGAAGCAGCAA CGCAGCCCGCCGCGGCCGCCGCCTCTGCTACCGCAAGATTTGGCAGCAAA AGTAGCCCCTGGCAACGACCGCTTCCCTCCGCCGCGCAACGCGACTTCCA CCGCCACGCTTCCACCGCCACCGCCAGCAGCAGCGGCGGCGGTGGTGGTG TCTCCGGGCCGGCGGAAAAGAGGGTGCTGTACGGCGGCCACCAGCCGACG TCACCGCTCCAGCGAACGGCCATGGCCGGGTGGGCTGCGGCAACGGCGCT CATGGACCCCGAGCGGGCGGACATGGTGGCCACCCTGGGGGAGGTGACGG GCAGGCTGGCGCTCGAGCAGCTCTATAGGCGAGAAAACCCCCTCCCTACG ACTGCCAGTTTTGTTTGTATGGTTCATTTTCGACAAAAACGTCAGCGGTC CACCTCTGACAGGAAATGTCGGTGGATCTGCGGGGCTTTCTCTCCCTGAA ATGCTGACTACAACGACAATCGCTTGTGAAGTCATGATCAGCAACGGTCT GCATTTTTTTTTGGTCCGAAAGTGAAAGTGGACGTAGTCGACACGAAACG TTGACCCCTCGTGGTGCTCCTTCTGTACGCCTGTTTTATCACAAAACGTG CTGTAGGTGCATGCTGGCGGATCCGGAGGGTCGGGAGATCCTCCGCGCGA GGCCTGTCATCAACGAGGCCACCGTCGATCTCGCCGCGCTTGCGGTGAGG TTTTCAGCATACCGACGTCCTTTGCTCTTGAAGGTCCTGCACACTACAAA CTAATGTGGGAAAGATGGATGGAGACACAGATGAGGGAAAAGTGATGGAG TGTGAGCACGCAGTGCTTTGTGTCGACCTATTCGAATCCGCTGCAAGAGA TTCACATCGTGAACCTTGTGCGCTTCGGCACGGGTGTTCGTGCCATTTAT GGGCAATGGAAGTACGCATGAGATTCCTGGCTTTGAACTGCCTCCGATTT CCTTGAGCTCGTATTCCAGTATCCCTCATCGCCCGTTCGCCGCCGCCGCA CCCGCCGCGGCTGCCGCAACCGCCGCAGCTGTAGCAGCAGCAATCAGCTC TATTAATAGTAAACTCTCTGTCACTTTTGTCCTGTTATGCTGCTTGGAAT CCACACATCTCCATGCATGCGACAGCGCCTCTTCTGAGGCTAGCCTACAG CGCCGGGCATGCAGCAACGAATGGCTCATCCCCCACTCCCCTCCCCCCGA TTTCGAACCTCGAAAACCCAGGGACGGTCAAACCCACCGCCCAGGGACGG TCAAGCCCATGATTTCAATCCCATTCCATGCAGTCCAAATTAACCAGTAT AAGCCGACGCGCCTCAACTCAACCCCTACTTTCCGTTAAAACAGGCGCTA CCCTCCGGCACGTTCGGCAAGAGCTACTCGAACTTTATGAAGGGGAACAA CTTCTCGCCCGACAGCCGAAGCGCGGTGCAATACGTCGACGACCCGGACC TGGCGTACGTCATGCGGAGGTGGGAGTGGCCGATCGACCACGCTCAACAC CGCTCACCATCCATGCGCAGTCACGTATGCGTGCTCTGCCACGGTCAACA CCTGGCTGGCGTTTTTTTCTCCTTAGTATTTTCCAACGAGAGAGGCCGAT CCACCATGCCCAACACCACGCAGTTCGCGCAAGTCTGTGCAAGAATGCAT CGCCACGGTTTAACACCCCTTGTGTGAAAGCTCTGAGTCTGTTCCAACGA GAGAGGCCGACCCACCACGCCCAACACTCACCATGCAATGCGAAGTTACG CATGCATGCACTGCGTCATCGTCAGCACCCGGCTGATCAATTGTTGACGC TTCTTCAAAACGGCGACCTCCTACCCCCCGTACGAACTCAGACAAAAAGA AACGCTGTATTACATCGGTGGCTTGCCAGCTTTTTCTTGAAAGCCCACCC CTTTGGCGCCAGGGCGTGCGTGATCCAAATGACATGGTGAACTGAAGGCA AGCACGCAAGTACTACTCCCCCACCCACCCCCGGGAGGTTCTCTCATCGC CGCCAAGATCCATCGTGTCGCCACCACCGCCGCCGCCGCCGCCGCCGCCG CCGCTGTCGAGTAGGTACCGCGAGGTCCACGACCTCTGGCACGTCCTCAG CGGCCTGGCTCCGTCGGTGGAGGGAGAGCTAGCGCTAAAATGGTTCGAGC TCGTCCAGACGGGGCTCCCCGTGTGCGCCCTGGGGGCCGTCGTCGGGCCC CTTGCCTTGCCTCGCCGAGAGCCCGCCGCGACGGCAGCTTCGTCATCCCC GATCCATGGGAGAGATACCGGAAGCAGCGGCGGCGGCGGAAGCTCCAGCG CAAGCGGCGGCGGGAAGAGGCAGGGCAGCCGAGAGGTGCTGGCGCGGACC TACGTCCCGTGGGCGATCCGCGCGGGAAGGCGGGCCCGGAAGCCTCTGAT CTGCGTGTGGTACGAGAGGCGGTGGGAGCAGCCCCTAGAGCAAGTGAGGA GGGAGCTTGGGGTGGAGGCGGCCCCGCGTCGAGGGAAGGCGGGGGAGGCG CCGGCACCGCCACGGTGA
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Coding sequence (CDS) from alignment at P-fluviatile_contig1:3074915..3078232-

>mRNA_P-fluviatile_contig1.249.1 ID=mRNA_P-fluviatile_contig1.249.1|Name=mRNA_P-fluviatile_contig1.249.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2184bp|location=Sequence derived from alignment at P-fluviatile_contig1:3074915..3078232- (Porterinema fluviatile SAG_2381)
ATGAAAGATGAAAGGGTCGTCTCTCCGCTATCGGACAGTCCGCCTGGTGG
CCTCGTGGCCGCCGACAGGAGCGGCGCGCGATTTCGCCTTGGAAGCAGCA
ACGCAGCCCGCCGCGGCCGCCGCCTCTGCTACCGCAAGATTTGGCAGCAA
AAGTAGCCCCTGGCAACGACCGCTTCCCTCCGCCGCGCAACGCGACTTCC
ACCGCCACGCTTCCACCGCCACCGCCAGCAGCAGCGGCGGCGGTGGTGGT
GTCTCCGGGCCGGCGGAAAAGAGGGTGCTGTACGGCGGCCACCAGCCGAC
GTCACCGCTCCAGCGAACGGCCATGGCCGGGTGGGCTGCGGCAACGGCGC
TCATGGACCCCGAGCGGGCGGACATGGTGGCCACCCTGGGGGAGGTGACG
GGCAGGCTGGCGCTCGAGCAGCTCTATAGGGTCGTCTCTCCGCTATCGGA
CAGTCCGCCTGGTGGCCTCGTGGCCGCCGACAGGAGCGGCGCGCGATTTC
GCCTTGGAAGCAGCAACGCAGCCCGCCGCGGCCGCCGCCTCTGCTACCGC
AAGATTTGGCAGCAAAAGTAGCCCCTGGCAACGACCGCTTCCCTCCGCCG
CGCAACGCGACTTCCACCGCCACGCTTCCACCGCCACCGCCAGCAGCAGC
GGCGGCGGTGGTGGTGTCTCCGGGCCGGCGGAAAAGAGGGTGCTGTACGG
CGGCCACCAGCCGACGTCACCGCTCCAGCGAACGGCCATGGCCGGGTGGG
CTGCGGCAACGGCGCTCATGGACCCCGAGCGGGCGGACATGGTGGCCACC
CTGGGGGAGGTGACGGGCAGGCTGGCGCTCGAGCAGCTCTATAGGTGCAT
GCTGGCGGATCCGGAGGGTCGGGAGATCCTCCGCGCGAGGCCTGTCATCA
ACGAGGCCACCGTCGATCTCGCCGCGCTTGCGGTGCATGCTGGCGGATCC
GGAGGGTCGGGAGATCCTCCGCGCGAGGCCTGTCATCAACGAGGCCACCG
TCGATCTCGCCGCGCTTGCGGCGCTACCCTCCGGCACGTTCGGCAAGAGC
TACTCGAACTTTATGAAGGGGAACAACTTCTCGCCCGACAGCCGAAGCGC
GGTGCAATACGTCGACGACCCGGACCTGGCGTACGTCATGCGGAGGCGCT
ACCCTCCGGCACGTTCGGCAAGAGCTACTCGAACTTTATGAAGGGGAACA
ACTTCTCGCCCGACAGCCGAAGCGCGGTGCAATACGTCGACGACCCGGAC
CTGGCGTACGTCATGCGGAGTAGGTACCGCGAGGTCCACGACCTCTGGCA
CGTCCTCAGCGGCCTGGCTCCGTCGGTGGAGGGAGAGCTAGCGCTAAAAT
GGTTCGAGCTCGTCCAGACGGGGCTCCCCGTGTGCGCCCTGGGGGCCGTC
GTCGGGCCCCTTGCCTTGCCTCGCCGAGAGCCCGCCGCGACGGCAGCTTC
GTCATCCCCGATCCATGGGAGAGATACCGGAAGCAGCGGCGGCGGCGGAA
GCTCCAGCGCAAGCGGCGGCGGGAAGAGGCAGGGCAGCCGAGAGGTGCTG
GCGCGGACCTACGTCCCGTGGGCGATCCGCGCGGGAAGGCGGGCCCGGAA
GCCTCTGATCTGCGTGTGGTACGAGAGGCGGTGGGAGCAGCCCCTAGAGC
AAGTGAGGAGGGAGCTTGGGGTGGAGGCGGCCCCGCGTCGAGGGAAGGCG
GGGGAGGCGCCGGCACCGCCACGGTGATAGGTACCGCGAGGTCCACGACC
TCTGGCACGTCCTCAGCGGCCTGGCTCCGTCGGTGGAGGGAGAGCTAGCG
CTAAAATGGTTCGAGCTCGTCCAGACGGGGCTCCCCGTGTGCGCCCTGGG
GGCCGTCGTCGGGCCCCTTGCCTTGCCTCGCCGAGAGCCCGCCGCGACGG
CAGCTTCGTCATCCCCGATCCATGGGAGAGATACCGGAAGCAGCGGCGGC
GGCGGAAGCTCCAGCGCAAGCGGCGGCGGGAAGAGGCAGGGCAGCCGAGA
GGTGCTGGCGCGGACCTACGTCCCGTGGGCGATCCGCGCGGGAAGGCGGG
CCCGGAAGCCTCTGATCTGCGTGTGGTACGAGAGGCGGTGGGAGCAGCCC
CTAGAGCAAGTGAGGAGGGAGCTTGGGGTGGAGGCGGCCCCGCGTCGAGG
GAAGGCGGGGGAGGCGCCGGCACCGCCACGGTGA
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