mRNA_P-fluviatile_contig1.247.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig1.247.1
Unique NamemRNA_P-fluviatile_contig1.247.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig1.247.1 vs. uniprot
Match: D7FM58_ECTSI (Adenine DNA glycosylase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM58_ECTSI)

HSP 1 Score: 112 bits (281), Expect = 4.620e-23
Identity = 56/79 (70.89%), Postives = 65/79 (82.28%), Query Frame = 2 
Query:  323 MSAYGTWVSEVILRRTRVQTVVNYYVILMTLFPTPQALAEADLEQVNNAWAGLGSYLLAKMLHEGAEKINSDYGGTLSG 559
            MSAYGTWVSEV+L++TRV+TV++YYV  MTLFPTP  LA A LEQVN AWAGLG Y  AKMLHEGA+K+ SD+ G L G
Sbjct:  175 MSAYGTWVSEVMLQQTRVETVIDYYVKWMTLFPTPNDLAAASLEQVNKAWAGLGYYRRAKMLHEGAKKVVSDHSGCLPG 253
[Close]
BLAST of mRNA_P-fluviatile_contig1.247.1 vs. uniprot
Match: A0A7S1QR20_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1QR20_ALECA)

HSP 1 Score: 87.8 bits (216), Expect = 1.480e-17
Identity = 45/80 (56.25%), Postives = 58/80 (72.50%), Query Frame = 2 
Query:  326 SAYGTWVSEVILRRTRVQTVVNYYVILMTLFPTPQALAEADLEQVNNAWAGLGSYLLAKMLHEGAEKINSDYGGTLSGRV 565
            SAYGTWVSEV+L++T+V+ VV Y+   M LFPT  ALA A+ ++VN AWAGLG Y  A+ LHEGA+ +  + GG L G V
Sbjct:   19 SAYGTWVSEVMLQQTQVERVVEYWTRWMKLFPTASALAVAEGDEVNAAWAGLGFYSRARRLHEGAKYVVQELGGELPGDV 98
[Close]
BLAST of mRNA_P-fluviatile_contig1.247.1 vs. uniprot
Match: A0A2R5GF03_9STRA (Adenine DNA glycosylase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GF03_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 7.610e-16
Identity = 42/83 (50.60%), Postives = 60/83 (72.29%), Query Frame = 2 
Query:  317 RRMSAYGTWVSEVILRRTRVQTVVNYYVILMTLFPTPQALAEADLEQVNNAWAGLGSYLLAKMLHEGAEKINSDYGGTLSGRV 565
            RR+  Y TWVSE++L++TRV+TV++Y+   M  FPTPQALAEA  ++VN +WAGLG Y  A+ LH GA+++  ++ G L   V
Sbjct:  143 RRVDPYETWVSEIMLQQTRVETVIDYFTKWMKRFPTPQALAEASPDEVNASWAGLGYYRRARNLHAGAQRVTEEFDGKLPSEV 225
[Close]
BLAST of mRNA_P-fluviatile_contig1.247.1 vs. uniprot
Match: A0A1V9ZA94_9STRA (Adenine DNA glycosylase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZA94_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 1.800e-15
Identity = 44/77 (57.14%), Postives = 57/77 (74.03%), Query Frame = 2 
Query:  323 MSAYGTWVSEVILRRTRVQTVVNYYVILMTLFPTPQALAEADLEQVNNAWAGLGSYLLAKMLHEGAEKINSDYGGTL 553
            +S YGTWVSE++ ++TRV+TVV+YYV  M  FPT  ALA A+ EQVN AWAGLG Y  A+MLH+GA+ +   Y G +
Sbjct:   56 VSPYGTWVSEIMCQQTRVETVVDYYVRWMEKFPTVHALAAAEPEQVNAAWAGLGYYRRARMLHDGAKYVVETYDGEM 132
[Close]
BLAST of mRNA_P-fluviatile_contig1.247.1 vs. uniprot
Match: A0A067BVX9_SAPPC (Adenine DNA glycosylase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BVX9_SAPPC)

HSP 1 Score: 88.2 bits (217), Expect = 3.450e-15
Identity = 43/77 (55.84%), Postives = 57/77 (74.03%), Query Frame = 2 
Query:  323 MSAYGTWVSEVILRRTRVQTVVNYYVILMTLFPTPQALAEADLEQVNNAWAGLGSYLLAKMLHEGAEKINSDYGGTL 553
            +S YGTWVSE++ ++TRV+TVV+YYV  M  FPT  ALA A+ +QVN AWAGLG Y  A+MLH+GA+ +   Y G +
Sbjct:   56 VSPYGTWVSEIMCQQTRVETVVDYYVRWMEKFPTVHALAAAEPDQVNAAWAGLGYYRRARMLHDGAKFVVETYNGDM 132
[Close]
BLAST of mRNA_P-fluviatile_contig1.247.1 vs. uniprot
Match: A0A1V9ZNM1_9STRA (Adenine DNA glycosylase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZNM1_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 5.390e-15
Identity = 46/74 (62.16%), Postives = 55/74 (74.32%), Query Frame = 2 
Query:  323 MSAYGTWVSEVILRRTRVQTVVNYYVILMTLFPTPQALAEADLEQVNNAWAGLGSYLLAKMLHEGA----EKIN 532
            +S Y TWVSE++ ++TRV+TVV YYV  M  FPT +ALA AD EQVN AWAGLG Y  A+MLHEGA    EK+N
Sbjct:   54 VSPYATWVSEIMCQQTRVETVVEYYVKWMEKFPTVEALAAADPEQVNAAWAGLGYYRRARMLHEGAKFVVEKLN 127
[Close]
BLAST of mRNA_P-fluviatile_contig1.247.1 vs. uniprot
Match: A0A7S4N547_9STRA (Adenine DNA glycosylase (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N547_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 7.080e-15
Identity = 43/83 (51.81%), Postives = 58/83 (69.88%), Query Frame = 2 
Query:  317 RRMSAYGTWVSEVILRRTRVQTVVNYYVILMTLFPTPQALAEADLEQVNNAWAGLGSYLLAKMLHEGAEKINSDYGGTLSGRV 565
            R ++AYG WVSE++L++TRV+ V+ YY+  M  FPT QALAEAD E VN  WAGLG Y  A++LH GA+ + + Y G +   V
Sbjct:  226 REVTAYGVWVSEIMLQQTRVEAVIPYYLKWMERFPTVQALAEADEEDVNAHWAGLGFYRRARLLHTGAKMVCTAYSGIVPSTV 308
[Close]
BLAST of mRNA_P-fluviatile_contig1.247.1 vs. uniprot
Match: A0A0W8DKR7_PHYNI (Adenine DNA glycosylase n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DKR7_PHYNI)

HSP 1 Score: 85.5 bits (210), Expect = 1.560e-14
Identity = 43/83 (51.81%), Postives = 58/83 (69.88%), Query Frame = 2 
Query:  317 RRMSAYGTWVSEVILRRTRVQTVVNYYVILMTLFPTPQALAEADLEQVNNAWAGLGSYLLAKMLHEGAEKINSDYGGTLSGRV 565
            R+++ Y TWVSE++L++TRV TVV Y++  +  FPT  ALAEA+ E VN  WAGLG Y  A+MLH GA+ +  +YGG L   V
Sbjct:   14 RKVAPYETWVSEIMLQQTRVDTVVEYFLRWIDKFPTVAALAEANEEDVNALWAGLGYYRRARMLHAGAKYVVENYGGELPSTV 96
[Close]
BLAST of mRNA_P-fluviatile_contig1.247.1 vs. uniprot
Match: A0A7S3UXY4_9STRA (Adenine DNA glycosylase n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3UXY4_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 1.810e-14
Identity = 41/78 (52.56%), Postives = 57/78 (73.08%), Query Frame = 2 
Query:  320 RMSAYGTWVSEVILRRTRVQTVVNYYVILMTLFPTPQALAEADLEQVNNAWAGLGSYLLAKMLHEGAEKINSDYGGTL 553
            ++ AYGTWVSEV+L++TRV+TV+ Y++  M LFP  Q LA+A  + VN AWAGLG Y  A+ L +GA+K+  D+ G L
Sbjct:   74 KVGAYGTWVSEVMLQQTRVETVIKYFLNWMQLFPDEQTLAQASPDAVNAAWAGLGYYSRARNLQKGAKKVVEDFNGVL 151
[Close]
BLAST of mRNA_P-fluviatile_contig1.247.1 vs. uniprot
Match: A0A516AG53_LINPO (Adenine DNA glycosylase n=1 Tax=Lingulodinium polyedra TaxID=160621 RepID=A0A516AG53_LINPO)

HSP 1 Score: 86.3 bits (212), Expect = 2.080e-14
Identity = 56/139 (40.29%), Postives = 72/139 (51.80%), Query Frame = 2 
Query:  326 SAYGTWVSEVILRRTRVQTVVNYYVILMTLFPTPQALAEADLEQVNNAWAGLGSYLLAKMLHEGAEKINSDYGGTLSGRVCLRGASESANAAGSRAEEEMPNKDWFQVLWILCDTLARWVEAVSSTLVVVMTRTR*LPG 742
            SAYGTWVSEV+L++T+V+ VV Y+   M  FPT +ALAEAD E VN AWAGLG Y  A+ LHEGA+ +           + LRG     +  G R    +P    +    +      R   AV   +  V  R R L G
Sbjct:  155 SAYGTWVSEVMLQQTQVERVVEYWARWMRRFPTVRALAEADAEAVNAAWAGLGFYGRARRLHEGAKHL-----------LALRGGEVPGDLEGLR---RVPGVGPYTAGAVASIAFGRRAAAVDGNVARVFARLRALEG 279
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.247.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FM58_ECTSI4.620e-2370.89Adenine DNA glycosylase n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S1QR20_ALECA1.480e-1756.25Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
A0A2R5GF03_9STRA7.610e-1650.60Adenine DNA glycosylase n=1 Tax=Hondaea fermentalg... [more]
A0A1V9ZA94_9STRA1.800e-1557.14Adenine DNA glycosylase n=1 Tax=Achlya hypogyna Ta... [more]
A0A067BVX9_SAPPC3.450e-1555.84Adenine DNA glycosylase n=2 Tax=Saprolegnia TaxID=... [more]
A0A1V9ZNM1_9STRA5.390e-1562.16Adenine DNA glycosylase n=1 Tax=Thraustotheca clav... [more]
A0A7S4N547_9STRA7.080e-1551.81Adenine DNA glycosylase (Fragment) n=1 Tax=Odontel... [more]
A0A0W8DKR7_PHYNI1.560e-1451.81Adenine DNA glycosylase n=1 Tax=Phytophthora nicot... [more]
A0A7S3UXY4_9STRA1.810e-1452.56Adenine DNA glycosylase n=1 Tax=Aplanochytrium sto... [more]
A0A516AG53_LINPO2.080e-1440.29Adenine DNA glycosylase n=1 Tax=Lingulodinium poly... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:3028774..3032756 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score111.7
Seed ortholog evalue3e-22
Seed eggNOG ortholog2880.D7FM58
Preferred nameMUTYH
KEGG koko:K03575,ko:K21121
KEGG Pathwayko03410,map03410
GOsGO:0000075,GO:0000077,GO:0000700,GO:0000701,GO:0000702,GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006285,GO:0006298,GO:0006304,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006979,GO:0008150,GO:0008152,GO:0008534,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009893,GO:0009987,GO:0010604,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0019219,GO:0019222,GO:0030983,GO:0031323,GO:0031325,GO:0031570,GO:0031974,GO:0031981,GO:0032069,GO:0032075,GO:0032356,GO:0032357,GO:0032404,GO:0032407,GO:0033554,GO:0034039,GO:0034641,GO:0034644,GO:0035485,GO:0042769,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044877,GO:0045007,GO:0045786,GO:0045935,GO:0046483,GO:0048037,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051336,GO:0051345,GO:0051536,GO:0051539,GO:0051540,GO:0051606,GO:0051716,GO:0051726,GO:0060255,GO:0065007,GO:0065009,GO:0070013,GO:0071214,GO:0071478,GO:0071482,GO:0071704,GO:0072421,GO:0080090,GO:0090304,GO:0097159,GO:0104004,GO:0140097,GO:1901360,GO:1901363,GO:1902799,GO:1902800,GO:1905777,GO:1905779
EggNOG free text desc.purine-specific mismatch base pair DNA N-glycosylase activity
EggNOG OGsCOG1194@1,KOG2457@2759
EC2.3.1.259
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03036,ko03400
Hectar predicted targeting categoryother localisation
Exons4
Model size1371
Cds size444
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.247.1prot_P-fluviatile_contig1.247.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig1 3029063..3032118 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815311.7763662-UTR-P-fluviatile_contig1:3028773..30290621622815311.7763662-UTR-P-fluviatile_contig1:3028773..3029062Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 3028774..3029062 +
1693561468.088299-UTR-P-fluviatile_contig1:3028773..30290621693561468.088299-UTR-P-fluviatile_contig1:3028773..3029062Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 3028774..3029062 +
1622815311.845231-UTR-P-fluviatile_contig1:3032118..30327561622815311.845231-UTR-P-fluviatile_contig1:3032118..3032756Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 3032119..3032756 +
1693561468.1532094-UTR-P-fluviatile_contig1:3032118..30327561693561468.1532094-UTR-P-fluviatile_contig1:3032118..3032756Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 3032119..3032756 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815311.7931936-CDS-P-fluviatile_contig1:3029062..30290791622815311.7931936-CDS-P-fluviatile_contig1:3029062..3029079Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3029063..3029079 +
1693561468.1134791-CDS-P-fluviatile_contig1:3029062..30290791693561468.1134791-CDS-P-fluviatile_contig1:3029062..3029079Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3029063..3029079 +
1622815311.804282-CDS-P-fluviatile_contig1:3030406..30305571622815311.804282-CDS-P-fluviatile_contig1:3030406..3030557Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3030407..3030557 +
1693561468.1244211-CDS-P-fluviatile_contig1:3030406..30305571693561468.1244211-CDS-P-fluviatile_contig1:3030406..3030557Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3030407..3030557 +
1622815311.816869-CDS-P-fluviatile_contig1:3031103..30312031622815311.816869-CDS-P-fluviatile_contig1:3031103..3031203Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3031104..3031203 +
1693561468.1357481-CDS-P-fluviatile_contig1:3031103..30312031693561468.1357481-CDS-P-fluviatile_contig1:3031103..3031203Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3031104..3031203 +
1622815311.8310916-CDS-P-fluviatile_contig1:3031942..30321181622815311.8310916-CDS-P-fluviatile_contig1:3031942..3032118Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3031943..3032118 +
1693561468.1447096-CDS-P-fluviatile_contig1:3031942..30321181693561468.1447096-CDS-P-fluviatile_contig1:3031942..3032118Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 3031943..3032118 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig1.247.1

>prot_P-fluviatile_contig1.247.1 ID=prot_P-fluviatile_contig1.247.1|Name=mRNA_P-fluviatile_contig1.247.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=148bp
MANVVSYSGRRMSAYGTWVSEVILRRTRVQTVVNYYVILMTLFPTPQALA
EADLEQVNNAWAGLGSYLLAKMLHEGAEKINSDYGGTLSGRVCLRGASES
ANAAGSRAEEEMPNKDWFQVLWILCDTLARWVEAVSSTLVVVMTRTR*
back to top

mRNA from alignment at P-fluviatile_contig1:3028774..3032756+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig1.247.1 ID=mRNA_P-fluviatile_contig1.247.1|Name=mRNA_P-fluviatile_contig1.247.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3983bp|location=Sequence derived from alignment at P-fluviatile_contig1:3028774..3032756+ (Porterinema fluviatile SAG_2381)
AGGACGAGACCCAAGATTGTGCATGCTCTGTAGCTGCTGCACTAGCCATC
ACGTTGGACCCATAATCCCCTGAGTTGTGGTTAGACGTCCTGGTGCCTTA
CATTACCGAGAGCCCATTTCGGGCGAGGAGCACGGGGTAAAGTATCCCGC
ACGTTACACGGCCCTGGACACAGCAGCAATATTGAAGCGGCCCGCGGAAA
CGGAACCCAGAGGTCAAACAGAAGGCGGAGGCGTTGCAGCTTAGCTATCT
TTGGAATTGAACGCCGTACGTGCGGTCTTTGCACCGGGGATGGCTAATGT
AGTGAGGTATGAGGGTTTGATTTGGGCGGCAGATGATGCGTAAATAGAGA
CGCCAGGGCAACACAGAACGGGTGCTTGTTACTCTGCGGATGGCTTGTGA
TGATGCGCAACTTGTTCCGTATGAGAGGAAAGGGTGCAAAAGTGAACTAC
TTTCCTGTAGTTTTCGAACAGCAGTGACCTTTAGAGACATCACAGCCTCG
GCAGTAATTTGGCGTGCCGGAGCGCATGCAGCCATTTCAGCATCTCCACT
TCACTTTGAGGCTTCGTACATACATGCAGTCTATGCCGAGAGAGCGACGA
GGTGATTTTGGCCCCATCATTTAGGCATGTGACACTGACCGAGCCATAGG
GTGAAAATGAGAAAGTGAACAACGCACATGAGTATTATTCAATGTTCTCT
TCGCGCACATGATAAAACCGGTAGAAAAGGAGGAATGAAGACGCGAAGGG
TAATTCCCCAAAACGCTGTCCCAAGCATGAATGACCTTTACCGGCGTAAA
TCTAATTGGACGGGGAAAGCAGCACGTCATTGGAAAGAAAACAGTTTTCG
GCGGACGTCGAAAGTAGTCCAAGAGCGTTTGAACGATTTGTGCACATCGT
ACGACGGAATCCCCTTACTGAGTTCAAGTGCGCCGTTGTGTTCAAGCCGT
TTCCTCTTGACATTGGACAACAGGAGGGGCTTTTTTGTGGAATCCCTCGT
GCCCTTTTGCAGCCTATAGACTAACCCGCCGAGAATGCCTCGTTTTCGCA
ATCCTTGACGTTCACAAAGGTAAATATCAACATTTCTTTCTCCGTGTCTC
TCGATATCTCTGCCGGGGGCGCCGCGTGCCCCACGTCTTGCAGGGCGGCA
TATGCATCAGGAATCACCGCCGCTAGGGCTGCCGAGGGCGATGCCCCACA
AACCCACCTCACGTCTTGGTACGGGAGCAAACCAAAACAGCCCCCGGACG
TTACTGGCACGAGAACCGAAAGCAGTAGCGGCAGGAACAACAGTAGAAGG
AAACAGGAGAAAAGAGAGGGCAGAGGCGGATGATGCGAAAGGCCAGAAAG
AACGCCTGCCTGAGAGGATCAGTACGGATTTTTGAGTGAATGGAACGGAA
ATTGCTGACAAGCTCCGCATAGTGACAGATCGCTAATTAACCCCCGCCTT
GATAATATCCATGGACTGAGTCCAATCACAAACACGAAGGCAAATACTTC
AACTCGTTTCCTGTCTCGCTTCTCCTCCGGAATCACGTTCATTTCCTAGC
ATGCGTTGCATTTCACAGCTTCGGGCGCAACTGCACGCTCGGCTTGACTC
GACTTCTTGATCGGGAACCCAACCAAAAACCAGTTATTCAGGCCGGCGGA
TGAGTGCTTATGGCACATGGGTGTCCGAGGTAATTCTGCGGCGGACGAGA
GTGCAGACGGTCGTGAACTACTACGTGATACTGATGACGCTGTTCCCTAC
CCCGCAAGCTCTGGCAGAGGCTGACCTCGAACAGGTGCGGGACAAATTAC
AGACCATGCTGCACTACTCTGGAGCCCGCAAAGCTCCATGTTACGTGTTG
GTTTCGCTCATGCCAGTGGGGCATGATCGAGTATGTTTCCTGTGTTTTCG
ATGCTCCAAAAAAGCCGATCTGTGCTTTTAGCCGAGCGTTCAAGTTGTAC
GTGGGTAGCCTTTGCTACCGAGAAGGTGTTCCTTTCCTAGCCATCGCGAG
CAGCCGCAGTGGGCAGATTTCCCATCGGGCACGTTCACCTTCACATGGGG
TGACTTGAACGCCTCCGTTTCTTGTCTATCTCAATGCGCCTGTCTAGTGT
CGGCCAGCCGTAAGTCACAACTAGCAGGCGGCTCTCCGAAAGCAGATACA
TCGCAGCTGAAGACGTGCACTTTGAAAATCAATAGCTAAATATAAGCAGC
TCGTTAAGAAACAACAATTCCTCAAAAAGTTCCTTTCAAAGGCACTTGCC
CTTCGCGCGCCTTGCCGTCGCGCCCACCGCACTCGCCCTTCTCCCTCGCC
CCCCCGCCAATTCCACGTGGATTCATCAAGGTCAACAATGCGTGGGCGGG
GCTAGGGTCCTACCTTCTGGCGAAAATGCTCCACGAGGGTGCCGAGAAAA
TAAACTCGGACTACGGCGGCACTCTGTCAGGCACGACCAAGGAGCTCAAG
GACCTCCCAGGAATCGGGTCGTAGCGTCCATTTTTTTCCCTGTTTCGACC
GCCTTCGATGTCGGCAGCAAACCGCAACTGTGGGATGGGACCTTATGAAA
ATGACATGTCATCATGTCGATTCACTAGCGTTTCCTTTTCCGCATGGCGT
TGTCTGATTGCTGGACTATCTACTTGTGCACGTCTGAAGCTGCACCTGCG
TGCGATTCTGTCGGCCTGTGTGCAAACATGCTTGTCTGCGTGTCTGCTTG
CTGGCCTGTCGGCGTGCTTGCTTGCCGACCTTCCTATCTCCTATCTGTAG
GCCGGAAGCGGCTATTTCGACGACACCGCCTCTCAACAGCAGCAAGATTG
GACAGGTTTGGTTTCTCGTATGGGCTCTTTTTCGCAGTGGTTTACATGCG
GACTCATTCACGTTCTTGGCTTTGCTATCAGACGGCGTTGCCTGTGTTCT
TTGACCTGCCGGCTTGCGTAGCCGGGATACGCGCGCTTTCATGTATGAAA
CAATGCCTCCATCGCTCTTGCTTGTAAAACGCACCATGAGCCCCTCGTAA
TGAAAAATTGAAGGTCCGCCCGCCATCAAATACATGCTTCTTGATGTATC
GTACCGATTTGTGACCTTTCTGTGCCGTCCTCATCACTGCTACTCATTCT
CTCACCTTCATTATCTCACCATCCTTCATCCCCCCTATCCCCCTATTTCT
GTCCCCCCAATGGATGTAGGCAGGGTCTGCTTGCGGGGTGCGTCGGAGTC
GGCGAACGCCGCTGGCTCTCGCGCTGAAGAAGAGATGCCTAATAAAGATT
GGTTTCAAGTGTTGTGGATATTGTGTGATACCCTGGCACGATGGGTAGAG
GCTGTGTCGTCGACGTTGGTCGTTGTGATGACACGAACAAGATGATTGCC
TGGAAGATGAGGAATGCTTCCGTGTTGAGAAGAAGATGTTGTAGAAAGTA
AACACTGGCTCTTAGTTGGCCAACACACACATAGATTACCCGAAGAGTGT
GCAGGAGCCCAGATGAATGCCGCTTCCCAGAGATGACCAGGAAAGCTACG
ATGCCATGACAATCCGGAAGGATCCACACGAGAGTGTGAGCTGCTCGTCT
AGGCAAATACAGAATCTTACAAAGAAATTCCTACGCATCTACTGCTTACG
TTACAGTTGAACCGACACATATAAGATGTAATAAGCTGTCTCTGAGGGGA
AGACAAGAGATTGAGGGAAGGGCAATGAGAACTGGAGACTCTGCACCAAT
GATTTGGGGTTGGAGTTTAGACGCCCAGTAGGGCATCAAGGTCGTGACTG
TATTTTTAGTTATTTCTGGTTCTGTTTAATTCAGTGGGGTTCGTTTGTAT
TTGTTGGCATGTATGTCTGTTTGTTTGTTTGTGGGTTGGTTCCAGAGAAG
GTTTGTTTTCTTTTCTTGTTTGACAACGAGGATGTGCACAAATATTGTCG
TACGAATAAAAAGGTGAAATATCCATAGCAGCAAATGAAGCATTGGTTGG
AACATTTACTTTGTTTGTTGGTTTTGACAGATT
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig1:3028774..3032756+

>mRNA_P-fluviatile_contig1.247.1 ID=mRNA_P-fluviatile_contig1.247.1|Name=mRNA_P-fluviatile_contig1.247.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=888bp|location=Sequence derived from alignment at P-fluviatile_contig1:3028774..3032756+ (Porterinema fluviatile SAG_2381)
ATGGCTAATGTAGTGAGATGGCTAATGTAGTGAGTTATTCAGGCCGGCGG
ATGAGTGCTTATGGCACATGGGTGTCCGAGGTAATTCTGCGGCGGACGAG
AGTGCAGACGGTCGTGAACTACTACGTGATACTGATGACGCTGTTCCCTA
CCCCGCAAGCTCTGGCAGAGGCTGACCTCGAACAGTTATTCAGGCCGGCG
GATGAGTGCTTATGGCACATGGGTGTCCGAGGTAATTCTGCGGCGGACGA
GAGTGCAGACGGTCGTGAACTACTACGTGATACTGATGACGCTGTTCCCT
ACCCCGCAAGCTCTGGCAGAGGCTGACCTCGAACAGGTCAACAATGCGTG
GGCGGGGCTAGGGTCCTACCTTCTGGCGAAAATGCTCCACGAGGGTGCCG
AGAAAATAAACTCGGACTACGGCGGCACTCTGTCAGGTCAACAATGCGTG
GGCGGGGCTAGGGTCCTACCTTCTGGCGAAAATGCTCCACGAGGGTGCCG
AGAAAATAAACTCGGACTACGGCGGCACTCTGTCAGGCAGGGTCTGCTTG
CGGGGTGCGTCGGAGTCGGCGAACGCCGCTGGCTCTCGCGCTGAAGAAGA
GATGCCTAATAAAGATTGGTTTCAAGTGTTGTGGATATTGTGTGATACCC
TGGCACGATGGGTAGAGGCTGTGTCGTCGACGTTGGTCGTTGTGATGACA
CGAACAAGATGAGCAGGGTCTGCTTGCGGGGTGCGTCGGAGTCGGCGAAC
GCCGCTGGCTCTCGCGCTGAAGAAGAGATGCCTAATAAAGATTGGTTTCA
AGTGTTGTGGATATTGTGTGATACCCTGGCACGATGGGTAGAGGCTGTGT
CGTCGACGTTGGTCGTTGTGATGACACGAACAAGATGA
back to top