mRNA_P-fluviatile_contig1.246.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig1.246.1 vs. uniprot
Match: D7FK46_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK46_ECTSI) HSP 1 Score: 612 bits (1578), Expect = 1.020e-211 Identity = 320/571 (56.04%), Postives = 382/571 (66.90%), Query Frame = 3
Query: 258 LCLSGAIRSFVHPVVHGSIRGNLIEAIEADGCEVDVFAYATRTDTVGAEKKKVLNSEFISNACEVEIALAALEPTRLVWHQEQAGIIPNSCEAAGRIREAPTEGVHHDDDGNLGKGGVRNWTWSTWQLGRPDASSRLYWQLYKSLAAYRMALREEERRGEA--YEWIIRGRFDLAWVRPLPPLQSFSRESVWFGRHYWPMSDQFAIVPRALSDRFFAAVSTFYGCDGQSWPAPVSWWQPGCREC-FEESVLFRHLHASHVPHRTYFMFEYVITRGAHGGVCNLGEVVFGEACDLLNLAGALQPPLNSHGCREALGEWANLRCRALLPAEGMGDSRRTDIISTSNPRVWEELVSKSSPPSLAAVRAAGARAGAAAEAVEKGSPSSNKGGHSQVAKNTTVPTVDEVELVRSKLIALRDAVQ-PQP-EGRASMFDDFEFKNSTRSSRWDGWGTLPPWSVCSYPKCPLAEPQFPGLSPHIVTYYTMGTHLLRELAQALRCFLNGAVGETRRQGGGFDASSCEGVRALELVMVDVALHTEELGICTADGNLGLSGMDHVLRFFSEPALHCQGYGNM 1955
+C SGAIRSFVHP VH SIR NLIE+I+ADGCEVDVFAY TR DTV + K+V N EF N+ +VE+ALA LEPTRL+WHQ+QAGIIPN C +A H W W Q P+AS LYWQLYKSLAAYRMALREE+R G Y+W+IRGR D+AW RPLPPL+SFSR++VWFGRHYWPMSD FA+VPR SDRFF+AV TFY CDG+SWP P SWWQP C FEESVLFRHLHAS +P+R Y +F+++ITRG GGVC LG +V+ E C LL L ALQPP + C EAL E+++LRCR L PA GM D RR D I PR WE L+ S P L + A A G A E G S + T+V ++V+ R KL+ LRDA+Q P P E M E K + RW GW T P W + S CPLAEPQ PG SPH+V YYTMG L+REL Q+++CF++ +GET+ GG + SSC GVR+L+LVM+DV+LHTEELGICTADG+LGLS + V RFF PA HC GYG +
Sbjct: 1 MCFSGAIRSFVHPAVHRSIRTNLIESIKADGCEVDVFAYVTREDTV-VKAKQVENPEFTPNSSDVEVALAVLEPTRLLWHQDQAGIIPNGCAGVNNRTDASRHSARH------------LWYWE--QRYSPEASRSLYWQLYKSLAAYRMALREEKRIGSGFTYDWVIRGRLDVAWARPLPPLRSFSRQAVWFGRHYWPMSDHFALVPRKFSDRFFSAVKTFYACDGRSWPPPSSWWQPECATIGFEESVLFRHLHASEIPYRFYPLFDFIITRGVIGGVCKLGFIVYSEVCSLLGLWNALQPPFSRDHCLEALAEYSDLRCRTLFPARGMEDERRVDAILDPEPRAWEALLDSS--PLLEPIPAVAAP-GPLGRATE--------GDSSDASIYTSVAKAEDVDSARLKLVLLRDALQAPSPLEPHYEMALREEAKERSLLDRWGGWKTHPLWWIHSIMGCPLAEPQHPGPSPHVVLYYTMGEPLVRELVQSVKCFVSRIIGETQVGGGDTNQSSCNGVRSLDLVMIDVSLHTEELGICTADGSLGLSASEQVSRFFDNPAAHCAGYGRL 545
BLAST of mRNA_P-fluviatile_contig1.246.1 vs. uniprot
Match: D7G5E2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5E2_ECTSI) HSP 1 Score: 272 bits (696), Expect = 3.050e-75 Identity = 224/684 (32.75%), Postives = 299/684 (43.71%), Query Frame = 3
Query: 246 CRVALCLSGAIRSFVHPVVHGSIRGNLIEAIEADGCEVDVFAYATRTDTVGAEKKKV-LNSEFISNACEVEIALAALEPTRLVWHQEQAGIIPNSCE-------------------AAGRIREA-PTEG-VHHDDDGNLGKGGVRNWTWSTWQLGRPDA-------SSRLYWQLYKSLAAYRMAL-REEERRGEA------------YEWIIRGRFDLAWVRPLPPLQSFSRESVWFGRHYWPMSDQFAIVPRALSDRFFAAVSTFYGCD---GQSWPAPVSWWQPGCREC------------------------------------------------------FEESVLFRHLHASHVPHRTYFMFEY------VITRGAHGGV-------CNLGEVVFGEACDLLNLAGALQPPLNSHGCREALGEWANLRCRALLPAEGMGDSRRTDIISTS---NPRVWEELVSKSSPPSLAAVRAAGARAGAAAEAVEKGSPSSNKGGHSQVAKNTTVPTVDEVELVRS--KLIALRDAV--------------------QPQPEGRASMFDDFEFKNSTRSSRWDGWGTLPP------WSVCSYPKCPLAEPQFPGLSPHIVTYYTMGTHLLRELAQALRC----FLNGAVG-ETRRQGGGFDASSCEGVRALELVMVDVALHTEEL 1853
C VA+ +SG +RSFV PV+H S R +++EAI+A+GC VDVF YA+ +G E V ++E I N +E + L PT+LVWHQEQAGIIPNSC A + A PT G V D+ N +G + +P + S R YWQLY+SLAAYR+A+ RE+E+ EA Y+WI+ RFD+AW + LP ++FSR+ VWF WPMS FA+VPRA SDRFF+AV F+ CD G SWP +WWQP C E F ES+++RHLHAS VP+R Y MFEY V A G C + C LL G S C AL EW++L CR E G +T+ S + + W P S V P + + V V E +L R+ L ALRDAV + P G S + + + G+ P WSV S C L E +PG +PHI+ + + +H +RELA A +C F+ GA + + GFDA+ C R+LELVM+DV+LH+ E+
Sbjct: 39 CAVAVSISGDVRSFVDPVLHRSFRRHVVEAIKAEGCTVDVFVYAS----LGDEDLLVEQDAETIRN---IEATMEFLSPTQLVWHQEQAGIIPNSCRPTATTPTTGGGDEAQPSSFAESSVPNARPTGGNVGGDNRSNQPRGHASK------EPSKPPSREQFSTRSERFYWQLYESLAAYRLAVQREDEKEKEAATIPTSSPASSKYDWIVTTRFDVAWKKSLPSFRAFSRDVVWFAAKSWPMSTNFALVPRAFSDRFFSAVEAFHACDDGNGPSWPPGEAWWQPDCGEHGQENGNSSGNVHSGGNLHHSPRSGPAGGGGGFELRGSDDGSIFHDNRGGGRGEGFGESIVYRHLHASGVPYRPYPMFEYYTVPPYVRDGDADGDAAGDTRSGCETSTPDYFTGCVLLGTVGLFSQAYTSEECATALSEWSSLHCRTSTHLEATGPGHQTERGSENLDPDLTTW--------PRSSVGVY-----------------PDETETDNGDVLGAAEADRVQEEDLRRAWFNLAALRDAVIVAADDGSEEVMHGSSNAGEEDTPSGETSRRNLGKEDGGDHDAAPKPSGSSPTRQTNRSWSVHSQGGCRLNE--YPGRAPHIIRHSSTDSHRMRELALATKCLAHRFIEGATAWSSVNEDFGFDATVCASSRSLELVMIDVSLHSAEV 682
BLAST of mRNA_P-fluviatile_contig1.246.1 vs. uniprot
Match: A0A6H5KVJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVJ6_9PHAE) HSP 1 Score: 217 bits (553), Expect = 3.690e-58 Identity = 141/369 (38.21%), Postives = 184/369 (49.86%), Query Frame = 3
Query: 246 CRVALCLSGAIRSFVHPVVHGSIRGNLIEAIEADGCEVDVFAYATRTDTVGAEKKKVLNSEFISNACEVEIALAALEPTRLVWHQEQAGIIPNSCE-------------------AAGRIREAPTEG--VHHDDDGNLGKGGVRNWTWSTWQLGRPDA-------SSRLYWQLYKSLAAYRMAL-REEERRGEA------------YEWIIRGRFDLAWVRPLPPLQSFSRESVWFGRHYWPMSDQFAIVPRALSDRFFAAVSTFYGCD---GQSWPAPVSWWQPGCREC------------------------------------------------------FEESVLFRHLHASHVPHRTYFMFEY 1058
C VA+ +SG +RSFV PVVH S + +++EAI+A+GC VDVF YA+ D E++ ++E I N +E + L PT+LVWHQEQAGIIPNSC A+ A +G V D+ N +G V + +P S R YWQLY+SLAAYR+A+ RE+E+ EA Y+WI+ RFD+AW +P L++FSR+ VWF WPMS FA+VPRA SDRFF+AV F+ CD G SWP +WWQP C E F ES+++RHLHAS VP+R Y MFEY
Sbjct: 38 CAVAVSISGDVRSFVDPVVHLSFQRHVVEAIKAEGCTVDVFVYASLGDEDLLEEQ---DAETIRN---IEATMEFLSPTQLVWHQEQAGIIPNSCRPTATTPTTGGGDEARPSSFASSNAANAKPKGGNVGGDNRSNQPRGHVSK------EPSKPPGREQFSTRSERFYWQLYESLAAYRLAVQREDEKEKEAATIPTSSPASSKYDWIVTTRFDVAWKNSVPSLRAFSRDVVWFAAKSWPMSTNFALVPRAFSDRFFSAVEAFHACDDGNGPSWPPGEAWWQPDCGEDGQENENGSGSVHSGGNLHHSPRGGPAGGGGDFDLRDWDDGSIFHDNRGGSRGEGFGESIVYRHLHASGVPYRPYPMFEY 394
BLAST of mRNA_P-fluviatile_contig1.246.1 vs. uniprot
Match: A0A7S2WLT0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WLT0_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 3.200e-17 Identity = 71/225 (31.56%), Postives = 103/225 (45.78%), Query Frame = 3
Query: 246 CRVALCLSGAIRSFVHPVVHGSIRGNLIEAIEADGCEVDVFAYATRTDTVGAEKKKVLNSEFISNACEVEIALAALEPTRLVWHQEQAGIIPNSCEAAGRIREAPTEGVHHDDDGNLGKGGVRNWTWSTWQLGRPDASSR----LYWQLYKSLAA-YRMALREEERRGEAYEWIIRGRFDLAWVRPLPPLQSFSRESVWFGRHYWPMSDQFAIVPRALSDRFFAA 905
CRVA+C+SG R+F HP+V + NL+ A+E CEVD+F +D V + N F A LE R + + + T ++ D G N +P A + W +S+++ + LREE R + Y W+IR RFDL+++ PLPPL S SR++V P+SD FA+VPRA D +F A
Sbjct: 476 CRVAVCMSGQWRTFAHPLVRQTFHQNLLGALETS-CEVDLFLCIKPSDQVAGRR----NEHFSRTTAAPSTREAILEVLRAELPDVLSRVRLVLADEPLPQSNGQTSALYPLDTGTSFPKACANGGGDCCSRSQPSAEVQSALAAAWPSLESVSSCLDLVLREERLRQQDYHWVIRTRFDLSYLVPLPPLASLSRKAVHVPYSSLPISDTFAVVPRAYVDAYFMA 695
BLAST of mRNA_P-fluviatile_contig1.246.1 vs. uniprot
Match: A0A7S2WMN0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WMN0_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 5.800e-9 Identity = 34/67 (50.75%), Postives = 45/67 (67.16%), Query Frame = 3
Query: 705 MALREEERRGEAYEWIIRGRFDLAWVRPLPPLQSFSRESVWFGRHYWPMSDQFAIVPRALSDRFFAA 905
+ LREE R + Y W+IR RFDL+++ PLPPL S SR++V P+SD FA+VPRA D +F A
Sbjct: 9 LVLREERLRQQDYHWVIRTRFDLSYLVPLPPLASLSRKAVHVPYSSLPISDTFAVVPRAYVDAYFMA 75
BLAST of mRNA_P-fluviatile_contig1.246.1 vs. uniprot
Match: A0A8J2SW29_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SW29_9STRA) HSP 1 Score: 58.2 bits (139), Expect = 4.270e-5 Identity = 59/210 (28.10%), Postives = 85/210 (40.48%), Query Frame = 3
Query: 249 RVALCLSGAIRSFVHPVVHGSIRGNLIEAIEADGCEVDVFAYATRT--DTVGAE-KKKVLNSEFISNACE------VEIALAALEPTRLVWHQEQAGIIPNSCEAAGRIREAPTEGVHHDDDGNLGKGGVRNWTWSTWQ--------LGRPDASSRLYW-QLYKSLAAYRMALREEERRGEAYEWIIRGRFDLAWVRPLPPLQSFSRESV 824
R A+ + G RS P V+ R NLI + G VDVF R+ + G+E +K+ + + + + L L+P ++ W AG+ D+ G+RN T W+ L A R W Q + AYR ALR R Y + R D AW+RP+PP+QSFSR+ V
Sbjct: 61 RAAVLIVGETRSLFLPRVYELCRRNLIGGLAKQGAAVDVFLRLDRSVKASEGSEGHRKISGARGVPSIIGHLPDSILRPMLQTLKPVQVSWF------------VAGK-----------DEGDTESDAGLRNGTLLPWRSLSIEERSLALLRAFDRPLWSQWWNRYQAYRGALRYSALRNFEYAYFCFARSDSAWLRPVPPIQSFSRDKV 247 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.246.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig1.246.1 >prot_P-fluviatile_contig1.246.1 ID=prot_P-fluviatile_contig1.246.1|Name=mRNA_P-fluviatile_contig1.246.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=623bp MSGRGASRRASMVVKALWGLLACAAAFVAEGTGERQDRHRRREKGDGVTCback to top mRNA from alignment at P-fluviatile_contig1:3020461..3028626- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig1.246.1 ID=mRNA_P-fluviatile_contig1.246.1|Name=mRNA_P-fluviatile_contig1.246.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=8166bp|location=Sequence derived from alignment at P-fluviatile_contig1:3020461..3028626- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig1:3020461..3028626- >mRNA_P-fluviatile_contig1.246.1 ID=mRNA_P-fluviatile_contig1.246.1|Name=mRNA_P-fluviatile_contig1.246.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3738bp|location=Sequence derived from alignment at P-fluviatile_contig1:3020461..3028626- (Porterinema fluviatile SAG_2381)back to top |