mRNA_P-fluviatile_contig1.243.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig1.243.1 vs. uniprot
Match: D7FK43_ECTSI (Rhomboid domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK43_ECTSI) HSP 1 Score: 384 bits (986), Expect = 4.400e-128 Identity = 198/264 (75.00%), Postives = 220/264 (83.33%), Query Frame = 3
Query: 204 LMALGAAQAMMISSGERTTQP---ESTLRGGYYRRRSMYSRRPMQRSR---NGGGKGITATNMLLVLNAIVFAVQTRYPNITKAGWKLAPAITRQGQWYRLLTPVFLHGSFTHLAVNSMSFSSVGPVVESVMGKKKFVAVYALSGVAGNILSCIVNPNTPAVGASGAIFGMVGAWGSFCLMNAAVLGRDNSQRALRNVAQTVMINVAYGLSSSQIDNMGHLGGFLGGALITFLIGPRLRRRLNPLTGQSFIVDESVKLGFPRLG 977
+MALGAA M ESTLRGGY RRRS++ RRP+QR + +GG GITATN+LL LNAIV+ Q RYP ITKAGWK+APAIT+QGQWYRLLTP+ LHGSFTHLAVNSMSFSSVGPVVE VMGK KFV VY L+G+AGN+LSCIVNP TP+VGASGAIFGMVGAWG+FCLMN VLGR+NSQRALRNVAQTVMINV YG+ SSQIDNMGHLGGFLGGA +TFLIGPR +RRLNP TGQ +IVDES KLG+PRLG
Sbjct: 1 MMALGAAHVMXXXXXXXXXXXXXXESTLRGGY-RRRSVFGRRPVQRRQAGGSGGQGGITATNVLLALNAIVYLFQMRYPAITKAGWKMAPAITQQGQWYRLLTPIVLHGSFTHLAVNSMSFSSVGPVVERVMGKAKFVTVYTLAGIAGNVLSCIVNPRTPSVGASGAIFGMVGAWGAFCLMNETVLGRNNSQRALRNVAQTVMINVVYGMGSSQIDNMGHLGGFLGGAAMTFLIGPRFKRRLNPYTGQPYIVDESFKLGWPRLG 263
BLAST of mRNA_P-fluviatile_contig1.243.1 vs. uniprot
Match: A0A6H5JA75_9PHAE (Rhomboid domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA75_9PHAE) HSP 1 Score: 387 bits (994), Expect = 6.310e-127 Identity = 204/276 (73.91%), Postives = 227/276 (82.25%), Query Frame = 3
Query: 168 DGEGESHDFGGELMALGAAQAMMISSGER---TTQPESTLRGGYYRRRSMYSRRPMQRSRNGGGK--GITATNMLLVLNAIVFAVQTRYPNITKAGWKLAPAITRQGQWYRLLTPVFLHGSFTHLAVNSMSFSSVGPVVESVMGKKKFVAVYALSGVAGNILSCIVNPNTPAVGASGAIFGMVGAWGSFCLMNAAVLGRDNSQRALRNVAQTVMINVAYGLSSSQIDNMGHLGGFLGGALITFLIGPRLRRRLNPLTGQSFIVDESVKLGFPRLGR 980
DGE + D G++MALGAA M ++QPESTLRGGY RRRS++ RRP+QR G G GITATN LL LNAIV+ Q RYP ITKAGWK+APAIT+QGQWYRLLTP+ LHGSFTHLAVNSMSFSSVGPVVE VMGK KFV VY ++G+AGN+LSCIVNP TP+VGASGAIFGMVGAWG+FCLMN VLGR+NSQRALRNVAQTVMINV YG+ SSQIDNMGHLGGFLGGA ITFLIGPR RLNP TGQ +IVDES KLG+PRLG+
Sbjct: 153 DGE-NTEDSKGDMMALGAAHVMXXXXXXXXADSSQPESTLRGGY-RRRSVFGRRPVQRQAGGSGGQGGITATNALLALNAIVYLFQMRYPAITKAGWKMAPAITQQGQWYRLLTPIVLHGSFTHLAVNSMSFSSVGPVVERVMGKAKFVTVYTVAGIAGNVLSCIVNPRTPSVGASGAIFGMVGAWGAFCLMNETVLGRNNSQRALRNVAQTVMINVVYGMGSSQIDNMGHLGGFLGGAAITFLIGPR---RLNPYTGQPYIVDESFKLGWPRLGK 423
BLAST of mRNA_P-fluviatile_contig1.243.1 vs. uniprot
Match: A0A835Z1Q0_9STRA (Rhomboid domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1Q0_9STRA) HSP 1 Score: 177 bits (448), Expect = 2.510e-48 Identity = 99/228 (43.42%), Postives = 134/228 (58.77%), Query Frame = 3
Query: 276 LRGGYYRRRSMYSRRPMQRSRNGGGKGITATNMLLVLNAIVFAVQTRYPNITKAGWKLAPAITRQGQWYRLLTPVFLHGSFTHLAVNSMSFSSVGPVVESVMGKKKFVAVYALSGVAGNILSCIVNPNTPAVGASGAIFGMVGAWGSFCLMNAAVLGRDNSQRALRNVAQTVMINVAYGLSSSQIDNMGHLGGFLGGALITFLIGPRLRRRLNPLTGQSFIVDESVKL 959
+RGGY RR S P + TN+LL + A ++ Q P IT G K+ I R GQWYRL+TP+FLH + HL +NSMS ++GP VE GK++ +++Y LSGV+G + SC NP +VGASGAIFGMVGA F N LG + R L+++ +TV+IN GL SQIDN GH GGF+ G ++T+L GP +R +P +G + V L
Sbjct: 1 MRGGYATRRRPRSNMPKA----------SVTNVLLAITAAIYGAQWLVPGITMQGAKITSKIMR-GQWYRLVTPIFLHANLAHLLMNSMSLYNIGPFVEQWFGKRRMLSIYVLSGVSGVLASCYWNPRASSVGASGAIFGMVGAAACFFASNRNELGAG-ADRGLQSILRTVVINTIMGLQISQIDNAGHAGGFVAGFVLTYLFGPNMRWVGSPYSGPRLVDVPRVSL 216
BLAST of mRNA_P-fluviatile_contig1.243.1 vs. uniprot
Match: A0A7S2ENP6_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2ENP6_9STRA) HSP 1 Score: 162 bits (411), Expect = 9.120e-41 Identity = 93/233 (39.91%), Postives = 140/233 (60.09%), Query Frame = 3
Query: 366 TNMLLVLNAIVFAVQTRYPNITKAGWKLAPAITRQGQWYRLLTPVFLHGSFTHLAVNSMSFSSVGPVVESVMGKKKFVAVYALSGVAGNILSCIVNPNTPAVGASGAIFGMVGAWGSFCLMNAAVLGRDNSQRALRNVAQTVMINVAYGLSSSQIDNMGHLGGFLGGALITFLIGPRLRRRLNPLTGQSFIVDESVKLGFPRLGRKTQGSPLQHGRWP*S*LLEPLVDWIKGS 1064
T L+ N ++ +Q +P+IT+ G K + I + + YRL++PVFLHG HLA+NS S +++GP VE G+ +F+ Y +GVAGN+LS ++PN P+VGASGAIFG+VGA+ F N ++ G+ +R L ++ QT + N+ YG S QIDN GH+GG LGGA I + GP+L P GQ ++D+ R+ R + P + G+ L L D ++G+
Sbjct: 199 TQRLVWTNVAIYGLQVVFPSITRWGAKRSDLILSRRELYRLISPVFLHGGVVHLAMNSFSLNNIGPEVERCFGQGRFLGTYLAAGVAGNLLSAYMSPN-PSVGASGAIFGLVGAYAVFLGRNKSLFGKSG-ERGLASLRQTFVTNLIYGFMSPQIDNWGHIGGALGGATIAYHFGPKLYLAALP-NGQRIVLDKPNI----RVPRSIETFPRKIGK-----RLYELADKMEGN 419
BLAST of mRNA_P-fluviatile_contig1.243.1 vs. uniprot
Match: E1Z519_CHLVA (Rhomboid domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z519_CHLVA) HSP 1 Score: 157 bits (396), Expect = 1.150e-40 Identity = 85/200 (42.50%), Postives = 122/200 (61.00%), Query Frame = 3
Query: 345 GGKGITATNMLLVLNAIVFAVQTRYPNITKAGWKLAPAITRQGQWYRLLTPVFLHGSFTHLAVNSMSFSSVGPVVESVMGKKKFVAVYALSGVAGNILSCIVNPNTPAVGASGAIFGMVGAWGSFCLMNAAVLGRDNSQRALRNVAQTVMINVAYGLSSSQIDNMGHLGGFLGGALITFLIGPRLRRRLNPLTGQSFIVD 944
G G AT++LLV NA++F +Q A+ GQW+RLLTP FLHG+ HLAVN S +++GP VE G +F+ +Y + VAGN+ S + P + ++GASGA+FG+ GA + N + G+ S R LR + QT+++NV YGLSS++IDN GH+GG +GGAL L+GPR + P ++VD
Sbjct: 32 GHPGRRATDVLLVSNALLFGLQLLTKQALTVWGVKVNALVVAGQWWRLLTPAFLHGNLMHLAVNCYSLNNLGPPVEGAAGPPRFLLMYLSAAVAGNVASFLGAPKSVSLGASGAVFGIGGALAMYFYRNRDIYGKT-SDRVLRQLWQTLVLNVVYGLSSTRIDNWGHMGGLVGGALAGLLLGPRFQATTLPGKRGKWLVD 230
BLAST of mRNA_P-fluviatile_contig1.243.1 vs. uniprot
Match: R7Q8K5_CHOCR (Rhomboid domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q8K5_CHOCR) HSP 1 Score: 157 bits (398), Expect = 1.270e-39 Identity = 94/189 (49.74%), Postives = 126/189 (66.67%), Query Frame = 3
Query: 357 ITATNMLLVLNAIVFAVQTRY-PNITKAGWKLAPAITRQGQWYRLLTPVFLHGSFTHLAVNSMSFSSVGPVVESVMGKKKFVAVYALSGVAGNILSCIVNPNTPAVGASGAIFGMVGAWGSFCLMNAAVLGRDN------SQRALRNVAQTVMINVAYGLS-SSQIDNMGHLGGFLGGALITFLIGPRL 899
I +++LL LN VFA+QT PN+ G K+ AIT GQ+YRL +P+FLH S +HL VNS S S GP VES GK +F+++Y SGV+GN+LS +P TPAVGASGAIFG+VGA + VLGR +++ LR++A V++N GL+ S++DN GHLGGFLGG ++L+GPRL
Sbjct: 150 IRISHVLLALNVGVFALQTLMGPNVLMRGAKVNSAITA-GQYYRLFSPMFLHASVSHLLVNSFSLHSTGPSVESWFGKPRFLSLYIASGVSGNVLSYFCSP-TPAVGASGAIFGLVGA-------SLVVLGRHRQILGPRARKGLRSLAYVVIMNFGIGLTPGSRVDNFGHLGGFLGGIAFSYLLGPRL 329
BLAST of mRNA_P-fluviatile_contig1.243.1 vs. uniprot
Match: L1I841_GUITC (Rhomboid domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1I841_GUITC) HSP 1 Score: 155 bits (391), Expect = 8.770e-39 Identity = 86/201 (42.79%), Postives = 127/201 (63.18%), Query Frame = 3
Query: 366 TNMLLVLNAIVFAVQTRYPN-ITKAGWKLAPAITRQGQWYRLLTPVFLHGSFTHLAVNSMSFSSVGPVVESVMGKKKFVAVYALSGVAGNILSCIVNPNT-PAVGASGAIFGMVGAWGSFCLMNAAVLGRDNSQRALRNVAQTVMINVAYGLS-SSQIDNMGHLGGFLGGALITFLIGPRLRRRLNPLTGQSFIVDESVKL 959
T+ L++N +VF +Q + +AG K+ I + Q+YRLLTP+FLHGS +H+ VN S +++GP VE G ++ V Y L+G+AGN+ S P P+VGASGAIFG+VGA G F + + G D S+ L + QT ++N+ GL+ S IDN GH+GG +GGA++ +LIGP L+ + + LTGQ + + V L
Sbjct: 145 TDFFLIVNVVVFLLQLLTQGALLEAGAKITSMIVYERQYYRLLTPIFLHGSLSHILVNCFSLNAIGPQVERYFGTERTVITYLLAGIAGNVASFYFGPKLIPSVGASGAIFGLVGALGVFLARHQDIFG-DRSRYMLNGIIQTCILNLIIGLAPGSNIDNWGHIGGAIGGAVVAYLIGPNLKVKRS-LTGQVLVDEPLVSL 343
BLAST of mRNA_P-fluviatile_contig1.243.1 vs. uniprot
Match: A0A7J7IFU7_9RHOD (Rhomboid n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IFU7_9RHOD) HSP 1 Score: 154 bits (390), Expect = 3.700e-38 Identity = 104/265 (39.25%), Postives = 150/265 (56.60%), Query Frame = 3
Query: 201 ELMALGAAQAMMISSGERTTQPESTLRGGYYRRRSMYSRRPMQRSRNGGGKGITATNMLLVLNAIVFAVQTRY-PNITKAGWKLAPAITRQGQWYRLLTPVFLHGSFTHLAVNSMSFSSVGPVVESVMGKKKFVAVYALSGVAGNILSCIVNPNTPAVGASGAIFGMVGAWGSFCLMNAAVLGRDNSQRALRNVAQTVMINVAYGLS-SSQIDNMGHLGGFLGGALITFLIGPRLRRRLNPLTGQSFIVDESVKLGF-PRLGRKT 986
+L GA ++++ + P S R G RR Y RP + + T+ L L + F +Q P AG K+ AI + G+WYR TP+FLHG+ HL VN S S+GP +E+ G +++ +Y LSG++GN+ S + N P+VGAS AIFG+VGA +F N G+++SQR LRN+A ++N+ GL+ +S+IDN GHLGG LGGA+ L GPRL L+P TG +VD + G+ R R+T
Sbjct: 154 QLWGFGARTLALLAAKSGKSYPPSGARRGALRR-CRYPGRPYRLNTEP-----QVTDWLAALTILSFLLQLLAGPAYVMAGAKVNAAI-QAGEWYRFFTPLFLHGNTLHLIVNLSSLKSLGPQIEATYGHRRYATLYLLSGLSGNLFSFLFN-TAPSVGASSAIFGLVGAMAAFYACNGDWFGQEHSQRMLRNIAWVTLLNLGQGLAPASRIDNFGHLGGLLGGAVFGILFGPRLY--LDP-TGH--LVDIPLAQGWLQRFRRRT 405
BLAST of mRNA_P-fluviatile_contig1.243.1 vs. uniprot
Match: D7FK25_ECTSI (Rhomboid domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK25_ECTSI) HSP 1 Score: 149 bits (375), Expect = 1.450e-37 Identity = 84/184 (45.65%), Postives = 114/184 (61.96%), Query Frame = 3
Query: 357 ITATNMLLVLNAIVFAVQTRYPNITKAGWKLAPAITRQGQWYRLLTPVFLHGSFTHLAVNSMSFSSVGPVVESVMGKKKFVAVYALSGVAGNILSCIVNPNTPAVGASGAIFGMVGAWGSFCLMNAAVLGRDNSQRALRNVAQTVMINVAYGLSSSQIDNMGHLGGFLGGALITFLIGPRLRRR 908
+TATN LLV+N +VF Q + P++T + +KLA AIT G+WY HLA NSM+ ++G E+ MG +KFVA+Y SGV+GN+LSCIV+P TP++GASGAIFG++GA L + + + +V QT V GL ID+ GHLGGF+GGA +T LI PR R+
Sbjct: 77 LTATNALLVINFLVFLQQQQDPSVTTSFYKLAYAITDHGEWYXXXXXXXXXXXXGHLAGNSMALFNIGRGTETYMGTEKFVALYVCSGVSGNVLSCIVDPLTPSLGASGAIFGLLGAEAMIHLAGP----KASMPLFVSSVGQTAFFAVLVGLLVPNIDHWGHLGGFVGGAALTLLIQPRSPRK 256
BLAST of mRNA_P-fluviatile_contig1.243.1 vs. uniprot
Match: M1UT47_CYAM1 (Rhomboid domain-containing protein n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1UT47_CYAM1) HSP 1 Score: 153 bits (387), Expect = 2.600e-37 Identity = 89/203 (43.84%), Postives = 123/203 (60.59%), Query Frame = 3
Query: 297 RRSMYSRRPMQRSRNGGGKGITATNMLLVLNAIVFAVQT-RYPNITKAGWKLAPAITRQGQWYRLLTPVFLHGSFTHLAVNSMSFSSVGPVVESVMGKKKFVAVYALSGVAGNILSCIVNPNTPAVGASGAIFGMVGAWGSFCLMNAAVLGRDNSQRALRNVAQTVMINVAYGLS-SSQIDNMGHLGGFLGGALITFLIGPRL 899
RRS Y RP + + T+ L + + F +Q P AG K+ AI R G+WYRL TP+FLHG+ HL VN S S+GP +E+ G +++ A+Y LSG+ GN+ S N P+VGAS AIFG++GA +F + N GR++S R LRN+A ++N+ GL+ +S+IDN GHLGG LGGA+ L GPRL
Sbjct: 236 RRSQYPGRPYRLHEHP-----KVTDWLAAITILSFLLQLWAGPAYVMAGAKVNAAI-RTGEWYRLFTPLFLHGNTLHLIVNLSSLKSLGPQIEATYGHRRYAALYLLSGLTGNLFSFFFN-TAPSVGASSAIFGLIGAMAAFYVSNTDWFGREHSHRVLRNIAWVTLLNLGQGLAPASRIDNFGHLGGLLGGAVFGVLFGPRL 431 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.243.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig1.243.1 >prot_P-fluviatile_contig1.243.1 ID=prot_P-fluviatile_contig1.243.1|Name=mRNA_P-fluviatile_contig1.243.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=329bp MFWWSRCLIVAGGHLVAQFLPRVHVLSLAVVGRSGGDDGGGGGGDGEGESback to top mRNA from alignment at P-fluviatile_contig1:3000551..3007704- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig1.243.1 ID=mRNA_P-fluviatile_contig1.243.1|Name=mRNA_P-fluviatile_contig1.243.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=7154bp|location=Sequence derived from alignment at P-fluviatile_contig1:3000551..3007704- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig1:3000551..3007704- >mRNA_P-fluviatile_contig1.243.1 ID=mRNA_P-fluviatile_contig1.243.1|Name=mRNA_P-fluviatile_contig1.243.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1974bp|location=Sequence derived from alignment at P-fluviatile_contig1:3000551..3007704- (Porterinema fluviatile SAG_2381)back to top |