mRNA_P-fluviatile_contig1.235.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig1.235.1 vs. uniprot
Match: D7FJH2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJH2_ECTSI) HSP 1 Score: 511 bits (1316), Expect = 4.370e-174 Identity = 272/350 (77.71%), Postives = 299/350 (85.43%), Query Frame = 1
Query: 274 MRKVSGVCLLLAASAAVPASAFTGPLPLAAQTAAPRQGWAEVVRSATDCQARRVAAFSPLSMTAGT---GTVVPEVDTETDVFTSLRLLTEGPVFIALQAVFVVALAGLVDAGFSGDWQARGYLSDNAAGTARMACLTAAAAHAILTGAAGFIAQAKGASLASAAVTLVTGPLGFLKVVAMPDQEELEAIAASKAPALSMVINTMELSDRQTPAAVVLSTSIKARKGREGALRNLLESLVNETVETQKDLVFTCTVNQDPEDRTSFFMLQRFPSPEAMSTYQNTDTFQAFTDGAEECIAEPMGLYMVNERSGKMGEPVHPFGPGGEGGRDDAIYSSPANLQGSLVPGAIR 1314
M KVSG+CL LAASA +P S F PLP+ Q A +Q WA+ RS T+C+ R ++ S LSMTAG VP+++ TD F +LR LTEGP+F LQAVFVVALAGLVDAGFSGDWQARGYLSD AA TAR ACLTAAAAH +LTGAAGFIA+AKG + +A +TL TGPLGFLKV AMPDQEELEAIAASKAP LSMVINT+ELS RQTP AVVLSTSIKA+KGREG LRNLLESLV ETV+ QKDLVFTCTVNQDPEDRT+FFMLQRFPSPEAMS+YQNTDTFQ+FTDGAEECIAEPMGLYMVNERSGK+GEPVHPFGPGGEGGRDDAIYSSPANLQGSLVPGA+R
Sbjct: 1 MGKVSGLCLFLAASAVLPTSGFVAPLPIRTQAARAQQRWADGARSTTECRGR--SSCSALSMTAGAMGGDATVPDLEEGTDFFAALRPLTEGPIFNGLQAVFVVALAGLVDAGFSGDWQARGYLSDAAADTARTACLTAAAAHVVLTGAAGFIAKAKGEGIGAAMITLATGPLGFLKVAAMPDQEELEAIAASKAPPLSMVINTLELSGRQTPGAVVLSTSIKAKKGREGTLRNLLESLVEETVDNQKDLVFTCTVNQDPEDRTAFFMLQRFPSPEAMSSYQNTDTFQSFTDGAEECIAEPMGLYMVNERSGKLGEPVHPFGPGGEGGRDDAIYSSPANLQGSLVPGAVR 348
BLAST of mRNA_P-fluviatile_contig1.235.1 vs. uniprot
Match: A0A835YX85_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX85_9STRA) HSP 1 Score: 215 bits (547), Expect = 1.430e-59 Identity = 124/257 (48.25%), Postives = 162/257 (63.04%), Query Frame = 1
Query: 559 QAVFVVALAGLVDAGFSGDWQARGYLSDNAAGTARMACLTAAAAHAILTGAAGFIAQAKGASLASAAVT-LVTGPLGFLKVVAMPDQ----EELEAIAASK---APALSMVINTMELSDRQTPAAVVLSTSIKARKGREGALRNLLESLVNETVETQKDLVFTCTVNQDPEDRTSFFMLQRFPSPEAMSTYQNTDTFQAFTDGAEECIAEPMGLYMVNERSGKMGEPVHPFGPGGEGGRDDAIYSSPANLQGSLVPG 1305
QA + +A GL+D GFSGDW GY+S+ G ++A A H AA +A KG + A A T LVTG L ++V + D + +EA A + P + IN++E+ +P ++LSTSI+ ++G EG +RNLLE L E V T VNQDPEDR +FF+LQRFPS AMS++Q + F++FT +E + EPMGLY+VNERSGKM EPV+PFGPGGEGGRDDA+YSSPANLQGS G
Sbjct: 99 QAAYGIAFLGLIDGGFSGDWVKFGYISEGLEGQLKLAAYVIGAVHVASAIAAARLASGKGQNAAIAFGTGLVTGLLELVRVAGVYDDGVKAKAVEAAAVANDLHKPPMQTQINSLEMDTTNSPTGLMLSTSIRVKEGAEGPMRNLLEELSAEARGAHASTVATMAVNQDPEDRRAFFVLQRFPSMRAMSSFQTSAAFKSFTTASEALLEEPMGLYLVNERSGKMTEPVYPFGPGGEGGRDDAVYSSPANLQGSQSRG 355
BLAST of mRNA_P-fluviatile_contig1.235.1 vs. uniprot
Match: A0A835YS87_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS87_9STRA) HSP 1 Score: 195 bits (496), Expect = 3.910e-53 Identity = 125/269 (46.47%), Postives = 164/269 (60.97%), Query Frame = 1
Query: 517 SLRLLTEGPVFIALQAVFVVALAGLVDAGF-SGDWQA-RGYLSDNAAGTARMACLTAAAAHAILTGAAGFIAQAKGASLASA-AVTLVTGPLGFLKVVA-MPDQEELE------AIAASKAPALSMVINTMELSDRQTPAAVVLSTSIKARKGREGALRNLLESLVNETVETQKDLVFTCTVNQDPEDRTSFFMLQRFPSPEAMSTYQNTDTFQAFTDGAEECIAEPMGLYMVNERSGKMGEPVHPFGPGGEGGRDDAIYSSPANLQGS 1293
SL +T+ F Q + A L +G +G W +G +++ A TA H ++ AA ++A GA + +A L TG L L+ + + D+E+ E + K P L M I++ LS +P V+LSTSI AR+G E A+R LLE+L ET Q+DLV T VNQDP +R SFFMLQRFPS +AMS +Q + F+AFTD AE I EPMGLY+VNERSG+M EPV+PFGPGGEGGRDDA++SSP NLQGS
Sbjct: 22 SLNPITDSTGFRVAQKAYAAGFATLATSGLVAGQWIVDQGIWTESTQQLVAQAATTAGGVHLVMACAAAWVASTNGADVPAAFGAGLATGALELLRSLGYLSDEEKAEQQKNRNSDEERKLPPLQMEISS--LSFASSPTGVMLSTSICAREGCELAMRTLLETLARETGSAQRDLVGTMAVNQDPGERRSFFMLQRFPSIQAMSRHQTSAPFKAFTDAAEALIEEPMGLYLVNERSGRMTEPVYPFGPGGEGGRDDAVFSSPVNLQGS 288
BLAST of mRNA_P-fluviatile_contig1.235.1 vs. uniprot
Match: A0A7S2SVQ8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVQ8_9STRA) HSP 1 Score: 129 bits (323), Expect = 4.910e-29 Identity = 87/266 (32.71%), Postives = 137/266 (51.50%), Query Frame = 1
Query: 529 LTEGPVFIALQAVFVVALAGLVDAGFSGDWQARGYLSDNAAGTARMACLTAAAA----HAILTGAAGFIAQAK----GASLASAAVTLVTGPLGFLKVVAMPDQEELEAIAASKAPALSMVINTMELSDRQTPAAVVLSTSIKARKGREGALRNLLESLVNETVETQKD--LVFTCTVNQDPEDRTSFFMLQRFPSPEAMSTYQNTDTFQAFTDGAEECIAEPMGLYMVNERSGKMGEPVHPFGPGGEGGRDDAIYSSPANLQGSL 1296
LT P+++AL+A +ALAGL+ G + + +AC AA A H + G G +AQ K G +A AA G L + A+ D+E +E A L I++ +++R +P V+ T ++ GRE A+ L + E + + + +NQDP+++ F + +RF S + +Q ++ ++ +G ++C+ PMGLYM K+ EP +PFGPGGEGGRDDAI+S+PAN GSL
Sbjct: 75 LTGSPLYLALEACQPLALAGLLAVGL--------LHPEGVDDSTWLACQGAAKALALSHVLSAGVCGALAQGKDLDAGPQVARAAAF---GALELARTAALDDRETMEG---KNAGLLQTEISSYSMTERMSPQGVLFVTQMEVLPGREYAVAKRLRDYAHAVTENKLSNRRILSIAINQDPQEKNCFTITERFSSLKTFYKHQESELYKTLVNGIQDCLRTPMGLYMTRNEHHKISEPRYPFGPGGEGGRDDAIFSNPANTDGSL 326
BLAST of mRNA_P-fluviatile_contig1.235.1 vs. uniprot
Match: A0A7S2WVP1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WVP1_9STRA) HSP 1 Score: 120 bits (301), Expect = 4.860e-27 Identity = 75/221 (33.94%), Postives = 117/221 (52.94%), Query Frame = 1
Query: 664 MACLTAAAA----HAILTGAAGFIAQAK----GASLASAAVTLVTGPLGFLKVVAMPDQEELEAIAASKAPALSMVINTMELSDRQTPAAVVLSTSIKARKGREGALRNLLESLVNETVETQKD--LVFTCTVNQDPEDRTSFFMLQRFPSPEAMSTYQNTDTFQAFTDGAEECIAEPMGLYMVNERSGKMGEPVHPFGPGGEGGRDDAIYSSPANLQGSL 1296
+AC AA A H + G G +AQ K G +A AA G L + A+ D+E +E A L I++ +++R +P V+ T ++ GRE A+ L + E + + + +NQDP+++ F + +RF S + +Q ++ ++ +G ++C+ PMGLYM K+ EP +PFGPGGEGGRDDAI+S+PAN GSL
Sbjct: 18 LACQGAAKALALSHVLSAGVCGALAQGKDLDAGPQVARAAAF---GALELARTAALDDRETMEG---KNAGLLQTEISSYSMTERMSPQGVLFVTQMEVLPGREYAVAKRLRDYAHAVTENKLSNRRILSIAINQDPQEKNCFTITERFSSLKTFYKHQESELYKTLVNGIQDCLRTPMGLYMTRNEHHKISEPRYPFGPGGEGGRDDAIFSNPANTDGSL 232
BLAST of mRNA_P-fluviatile_contig1.235.1 vs. uniprot
Match: A0A7S1JNT6_9ALVE (Hypothetical protein n=1 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A7S1JNT6_9ALVE) HSP 1 Score: 107 bits (268), Expect = 7.560e-22 Identity = 72/264 (27.27%), Postives = 128/264 (48.48%), Query Frame = 1
Query: 511 FTSLRLLTEGPVFIALQAVFVVALAGLVDAGFSGDWQARGYLSDNAAGTARMACLTAAAAHAILTGAAGFIAQAKGASL-ASAAVTLVTGPLGFLKVVAMPDQEELEAIAASKAPALSMVINTMELSDRQTPAAVVLSTSIKARKGREGALRNLLESLVNETVETQKDLVFTCT---VNQDPEDRTSFFMLQRFPSPEAMSTYQNTDTFQAFTDGAEE--CIAEPMGLYMVNERSGKMGEPVHPFGPGGEGGRDDAIYSSPANL 1284
F +R +F+ ++ + + VD G++GDW G+L+++ AR + F+A +KG +AA T + G ++V D+E E + L + + +L D + ++LS +K+RK + + L+ + + + T + VNQDP R F +++RF + +QN F++F ++ C+ EP+ L++V + G++ +PFGPGGEGGRDDA++SSP NL
Sbjct: 58 FEGVRQYLNSNLFVGVELLLLFLFFSSVDCGWTGDWSMLGWLTNDVEAYARQTVYALLGIRLFAAPVSAFLAVSKGLDWRVNAARTFLFGVADMMRVGLADDKETREYKRFRETEPLHDIFTSDQLLDNVSERGLMLSMVLKSRKEKAPVTQELVRKYYEYVKQVDVETMHTVSAINVNQDPRGRLDFIIVERFADIPHLIRHQNEPAFKSFVAALQDDDCLEEPINLHIVGDADGQVQINRYPFGPGGEGGRDDALFSSPINL 321
BLAST of mRNA_P-fluviatile_contig1.235.1 vs. uniprot
Match: A0A0G4H4B5_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4H4B5_VITBC) HSP 1 Score: 107 bits (268), Expect = 3.570e-21 Identity = 72/264 (27.27%), Postives = 128/264 (48.48%), Query Frame = 1
Query: 511 FTSLRLLTEGPVFIALQAVFVVALAGLVDAGFSGDWQARGYLSDNAAGTARMACLTAAAAHAILTGAAGFIAQAKGASL-ASAAVTLVTGPLGFLKVVAMPDQEELEAIAASKAPALSMVINTMELSDRQTPAAVVLSTSIKARKGREGALRNLLESLVNETVETQKDLVFTCT---VNQDPEDRTSFFMLQRFPSPEAMSTYQNTDTFQAFTDGAEE--CIAEPMGLYMVNERSGKMGEPVHPFGPGGEGGRDDAIYSSPANL 1284
F +R +F+ ++ + + VD G++GDW G+L+++ AR + F+A +KG +AA T + G ++V D+E E + L + + +L D + ++LS +K+RK + + L+ + + + T + VNQDP R F +++RF + +QN F++F ++ C+ EP+ L++V + G++ +PFGPGGEGGRDDA++SSP NL
Sbjct: 166 FEGVRQYLNSNLFVGVELLLLFLFFSSVDCGWTGDWSMLGWLTNDVEAYARQTVYALLGIRLFAAPVSAFLAVSKGLDWRVNAARTFLFGVADMMRVGLADDKETREYKRFRETEPLHDIFTSDQLLDNVSERGLMLSMVLKSRKEKAPVTQELVRKYYEYVKQVDVETMHTVSAINVNQDPRGRLDFIIVERFADIPHLIRHQNEPAFKSFVAALQDDDCLEEPINLHIVGDADGQVQINRYPFGPGGEGGRDDALFSSPINL 429
BLAST of mRNA_P-fluviatile_contig1.235.1 vs. uniprot
Match: A0A7S2PVS3_9DINO (Hypothetical protein n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2PVS3_9DINO) HSP 1 Score: 87.0 bits (214), Expect = 7.780e-16 Identity = 47/128 (36.72%), Postives = 72/128 (56.25%), Query Frame = 1
Query: 889 DRQTPAAVVLSTSIKARKGREGALRNLLESLVNETVETQKDLVFTCTVNQDPEDRTSFFMLQRFPSPEAMSTYQNTDTFQAFTDGAEECIAEPMGLYMVNERSGKMGEPVHPFGPGGEGGRDDAIYSS 1272
D + +A++ + +++A G EG L + V LV T + Q+ ED F +L R+ S M +Q +F+ D E + +P+GLY+++E+ G+ G +PFGPGGEGGRDDAIYSS
Sbjct: 70 DGVSSSAIMQTMTLRAEAGSEGRLARQINRFV--AASRTDGLVMTASATQNQEDPCDFMVLLRYESMHTMRDHQTQASFKEMLDKMEPHLEKPIGLYLMDEQFGQAGMARYPFGPGGEGGRDDAIYSS 195
BLAST of mRNA_P-fluviatile_contig1.235.1 vs. uniprot
Match: A0A813LUA9_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813LUA9_POLGL) HSP 1 Score: 86.7 bits (213), Expect = 2.170e-15 Identity = 59/183 (32.24%), Postives = 92/183 (50.27%), Query Frame = 1
Query: 751 SAAVTLVTGPLGFLKVVAMPDQEELEAIAASKAPALSMVINTMELSDRQTPAAVVL-STSIKARKGREGALRNLLESLVNETVETQKD-LVFTCTVNQDPEDRTSFFMLQRFPSPEAMSTYQNTDTFQAFTDGAEECIAEPMGLYMVNERSGKMGEPVHPFGPGGEGGRDDAIYSSPANLQGS 1293
+AA +++ G L + +E + SM ++++ ++ P +L S SI+A G E L + LV Q D V + + Q+ ED F + R+ S M T+Q +F+ + E+ + +P+GLY+ +E+ G +G HPFGPGGEGGRDDAIYSS GS
Sbjct: 51 NAAPSMLDGLLKLPDIFTEAFEEAQDMFGQGSGELESMEVSSLGMAQDGLPKNGLLQSMSIRAAAGSERRLARQVGKLV---ASAQADPAVLSASAIQNKEDPCDFVVFLRYSSMRQMETHQTGPSFKPLLEAMEQQLEQPIGLYLADEQLGHIGMARHPFGPGGEGGRDDAIYSSRKRADGS 230
BLAST of mRNA_P-fluviatile_contig1.235.1 vs. uniprot
Match: A0A1X6NUX0_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NUX0_PORUM) HSP 1 Score: 84.3 bits (207), Expect = 1.450e-14 Identity = 37/84 (44.05%), Postives = 54/84 (64.29%), Query Frame = 1
Query: 1015 VFTCTVNQDPEDRTSFFMLQRFPSPEAMSTYQNTDTFQAFTDGAEECIAEPMGLYMVNERSGKMGEPVHPFGPGGEGGRDDAIY 1266
V VNQDP D F ++QRFP P M +Q+ ++ AF A+ +AE +G+Y+ E GK+G+ ++P+GP GEGGRDD +Y
Sbjct: 153 VLNFVVNQDPSDPAYFQVIQRFPGPTGMVAHQSGASYSAFVRSAQPLLAESLGVYLCKESGGKIGQALYPWGPKGEGGRDDMVY 236 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.235.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig1.235.1 >prot_P-fluviatile_contig1.235.1 ID=prot_P-fluviatile_contig1.235.1|Name=mRNA_P-fluviatile_contig1.235.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=350bp MRMRKVSGVCLLLAASAAVPASAFTGPLPLAAQTAAPRQGWAEVVRSATDback to top mRNA from alignment at P-fluviatile_contig1:2916581..2924459+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig1.235.1 ID=mRNA_P-fluviatile_contig1.235.1|Name=mRNA_P-fluviatile_contig1.235.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=7879bp|location=Sequence derived from alignment at P-fluviatile_contig1:2916581..2924459+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig1:2916581..2924459+ >mRNA_P-fluviatile_contig1.235.1 ID=mRNA_P-fluviatile_contig1.235.1|Name=mRNA_P-fluviatile_contig1.235.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2100bp|location=Sequence derived from alignment at P-fluviatile_contig1:2916581..2924459+ (Porterinema fluviatile SAG_2381)back to top |