mRNA_P-fluviatile_contig1.229.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig1.229.1
Unique NamemRNA_P-fluviatile_contig1.229.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig1.229.1 vs. uniprot
Match: A0A6H5JCF0_9PHAE (RibD_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCF0_9PHAE)

HSP 1 Score: 431 bits (1107), Expect = 7.240e-144
Identity = 243/363 (66.94%), Postives = 271/363 (74.66%), Query Frame = 1
Query:  208 PTATAAATAVSNARYTTKTSRGDAPLPNQQLGQQQLRRTIEESVLNGLITGILAHCDRVERGELRRRRPFVTLTYAQSIDGSIAGANKTQVFLSGSESLMMTHGLRSIHDAILVGAGTVRQDNPRLNVRHWPPVDPSAFPSARDENINSDSGSDRLASEDGGAVPDGRGSSRAGEGGAEESTAPRPVILAGSLSELPQSMRLGGAVVFTNLSSPEAWRWLTEWAQRSKEGSQDLAANDIVVVHCRLRADGRCDVGDCLEKLYAMGFRSLMVEGGATVIASFLRGCGEEVG-VGEGVHNVDGQLVDRVVVTIAPMFLQGYNVLATEAGPDDASTARPRSGFPLPLLDVGYVRLGQDLVVVGAPA 1293
            P  TAAAT V +A   T    G   L +++L QQQLR  IE+ VL+GL +G+  H +RVERGELR R PFVTLTYAQSIDGSIA A+K+QVFLSGSES  MTHGLRSIHD ILVGAGTVRQDNPRLN+RHWPP       S  D    +          D       RGS   G  G E + APR V+ +G+LS+LP SMRLGGAVVFT+LSSP+AWRWL EWAQRS+EGS+D AAND V+VH  L+ADGRCDVGDCLEKLY+MGFRSLMVEGGATVI+SFLRGCGE+ G   EG  N DGQLVDRVVVTIAP FLQGYNVLATE     A T  P SGFPLPLLDVG+VRLGQDLVVVGAPA
Sbjct:  162 PCLTAAATKVHHAHPPTS---GGPALVDERLSQQQLRHKIEDGVLSGLASGMREHRERVERGELRPR-PFVTLTYAQSIDGSIAAADKSQVFLSGSESRTMTHGLRSIHDGILVGAGTVRQDNPRLNIRHWPPA------SCGDGGRGTXXXXXXXXXXD---FDQARGSDAIGRRGME-TAAPRAVVFSGNLSQLPHSMRLGGAVVFTDLSSPDAWRWLAEWAQRSREGSEDRAANDFVIVHSPLQADGRCDVGDCLEKLYSMGFRSLMVEGGATVISSFLRGCGEQTGREEEGGGNPDGQLVDRVVVTIAPTFLQGYNVLATEGNACGARTTSPGSGFPLPLLDVGFVRLGQDLVVVGAPA 510          
BLAST of mRNA_P-fluviatile_contig1.229.1 vs. uniprot
Match: D8LE35_ECTSI (RibD_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE35_ECTSI)

HSP 1 Score: 344 bits (883), Expect = 8.650e-114
Identity = 184/263 (69.96%), Postives = 204/263 (77.57%), Query Frame = 1
Query:  508 MTHGLRSIHDAILVGAGTVRQDNPRLNVRHWPPVDPSAFPSARDENINSDSGSDRLASEDGGAVPDGRGSSRAGEGGAEESTAPRPVILAGSLSELPQSMRLGGAVVFTNLSSPEAWRWLTEWAQRSKEGSQDLAANDIVVVHCRLRADGRCDVGDCLEKLYAMGFRSLMVEGGATVIASFLRGCGEEVGVGEGV-HNVDGQLVDRVVVTIAPMFLQGYNVLATEAGPDDASTARPRSGFPLPLLDVGYVRLGQDLVVVGAPA 1293
            MTHGLRSIHD ILVGAGTVRQDNPRLN+RHWPP   S     R    + +   D        A    RGS   G G  +E+ APR V+LAG+LS+LP+SMRLGGAVVFT+LSSP+AWRWL EWAQRS+EGS+D AAND V+VH  L+ADGRCDVGDCLEKLY+MGFRSLMVEGGATVI+SFLRGCGEE+   E    N DGQLVDRVVVTIAPMFLQGYNVLATE     A T  P +GFPLPLLDVG+VRLGQDLVVVGAPA
Sbjct:    1 MTHGLRSIHDGILVGAGTVRQDNPRLNIRHWPPA--SCGDGGRGTTSSEEXEED--------AFDQARGSDAIGRG-EKETAAPRAVVLAGNLSQLPRSMRLGGAVVFTDLSSPDAWRWLAEWAQRSREGSEDRAANDFVIVHSPLQADGRCDVGDCLEKLYSMGFRSLMVEGGATVISSFLRGCGEEMARDEEFGRNPDGQLVDRVVVTIAPMFLQGYNVLATEGNACGARTTSPGAGFPLPLLDVGFVRLGQDLVVVGAPA 252          
BLAST of mRNA_P-fluviatile_contig1.229.1 vs. uniprot
Match: A0A835YLP6_9STRA (Dihydrofolate reductase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLP6_9STRA)

HSP 1 Score: 174 bits (441), Expect = 1.530e-48
Identity = 108/251 (43.03%), Postives = 137/251 (54.58%), Query Frame = 1
Query:  409 RPFVTLTYAQSIDGSIAGANKTQVFLSGSESLMMTHGLRSIHDAILVGAGTVRQDNPRLNVRHWPPVDPSAFPSARDENINSDSGSDRLASEDGGAVPDGRGSSRAGEGGAEESTAPRPVILAGSLSELPQSMRLGGAVVFTNLSSPEAWRWLTEWAQRSKEGSQDLAANDIVVVHCRLRADGRCDVGDCLEKLYAMGFRSLMVEGGATVIASFLRGCGEEVGVGEGVHNVDGQLVDRVVVTIAPMFLQGY 1161
            RPFVTLTYAQS+DGSIA A+K  V +SG  S +MTHGLRS+HD ILVG GTVR+DNPRLNVR W                  DSG  +                       +    PRP++L+  +  LP +++  GAV+FT+    E   WL   A R+  G  D  A+D V+VHC   A G CD+ DCL +L AMGF S+MVEGG  +I +FL+                  LVDR+VVT+AP+ L GY
Sbjct:    1 RPFVTLTYAQSLDGSIASADKRPVRISGRASRIMTHGLRSLHDGILVGGGTVRRDNPRLNVREWV----------------GDSGDSQ-----------------------DPPPCPRPIVLSSQMG-LPMAIKAHGAVIFTSFCRAETQSWL---AARAHGGGGD--ASDCVIVHCATAAGGCCDLRDCLARLAAMGFASVMVEGGGRIIRAFLQ----------------AGLVDRLVVTVAPLMLGGY 190          
BLAST of mRNA_P-fluviatile_contig1.229.1 vs. uniprot
Match: A0A2H3JBV3_WOLCO (2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate reductase n=1 Tax=Wolfiporia cocos (strain MD-104) TaxID=742152 RepID=A0A2H3JBV3_WOLCO)

HSP 1 Score: 125 bits (314), Expect = 5.340e-29
Identity = 99/270 (36.67%), Postives = 128/270 (47.41%), Query Frame = 1
Query:  409 RPFVTLTYAQSIDGSIAGANKTQVFLSGSESLMMTHGLRSIHDAILVGAGTVRQDNPRLNVRHWPPVDPSAFPSARDENINSDSGSDRLASEDGGAVPDGRGSSRAGEGGAEESTAPRPVILAGSLSELP-----QSMRLGGA----VVFTNLSSPEAWRWLTEWAQRSKEGSQDLAANDIVVVHCRLRADGRCDVGDCLEKLYAMGFRSLMVEGGATVIASFLRGCGEEVGVGEGVHNVDGQLVDRVVVTIAPMFL------QGYNVLA 1173
            RP+VTLTYAQS+D  IAG    Q+ LSG ESL+MTH LR++HDAI++G GT   D+P+LN RH PP+     P+A  +  N                                   PRP+IL  +L   P     ++ R G      V+ T  SS      + E++QR KE  +D  A  + +        GR D+ D L KL   G RS+MVEGGA+VI SFL                 G  VD V+VTIAP  +       G NVLA
Sbjct:   55 RPYVTLTYAQSLDAKIAGPGGKQLALSGKESLVMTHWLRTLHDAIMIGIGTALNDDPQLNTRHLPPL-----PNAISKYHN-----------------------------------PRPIILDANLRLSPSCKLLKNYREGRGRRPWVISTTYSSS-----MQEYSQRKKE-LEDAGARVLELASEDGMEHGRFDIPDLLAKLKLFGIRSVMVEGGASVIQSFLAAAS---------GGASGSQVDVVIVTIAPTLVGREGVEYGSNVLA 269          
BLAST of mRNA_P-fluviatile_contig1.229.1 vs. uniprot
Match: A0A8H5LT06_9AGAR (2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate reductase n=1 Tax=Tetrapyrgos nigripes TaxID=182062 RepID=A0A8H5LT06_9AGAR)

HSP 1 Score: 120 bits (301), Expect = 1.720e-27
Identity = 83/248 (33.47%), Postives = 113/248 (45.56%), Query Frame = 1
Query:  409 RPFVTLTYAQSIDGSIAGANKTQVFLSGSESLMMTHGLRSIHDAILVGAGTVRQDNPRLNVRHWPPVDPSAFPSARDENINSDSGSDRLASEDGGAVPDGRGSSRAGEGGAEESTAPRPVILAGSLSELPQSMRLGGAVVFTNLSSPEAWRWLTEWAQRSKEGSQDLAANDIVVVHCRLRADGRCDVGDCLEKLYAMGFRSLMVEGGATVIASFLRGCGEEVGVGEGVHNVDGQLVDRVVVTIAPMFL 1152
            RP VTLT+AQS+D  IAG N  Q+ LSG ES++MTH +R++HDAI++G GT   D+P+LN RH PP  P+   +  D+  +                                   PRPVIL   L   P S  L     +   S    W + +  A   K     L      ++      DG   +   L+ L+ MG RSLMVEGGA VI SF               +   +LVD ++VT+AP F+
Sbjct:   24 RPHVTLTFAQSVDAKIAGQNGKQLILSGKESMVMTHWMRTMHDAIMIGIGTAFNDDPQLNTRHLPPRPPNPAQNGHDKPYH----------------------------------LPRPVILDTHLRFSPTSKLLKN---YQQGSGRRPWVFCSSDAPDVKRKQDALEQAGARIIQISGVEDGHLSLPAVLKSLHDMGIRSLMVEGGARVIRSFFSA------------STSSRLVDSIIVTVAPTFV 222          
BLAST of mRNA_P-fluviatile_contig1.229.1 vs. uniprot
Match: A0A1Q3DY39_LENED (2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate reductase n=2 Tax=Lentinula edodes TaxID=5353 RepID=A0A1Q3DY39_LENED)

HSP 1 Score: 119 bits (298), Expect = 5.200e-27
Identity = 91/274 (33.21%), Postives = 123/274 (44.89%), Query Frame = 1
Query:  397 LRRRRPFVTLTYAQSIDGSIAGANKTQVFLSGSESLMMTHGLRSIHDAILVGAGTVRQDNPRLNVRHWPPVDPSAFPSARDENINSDSGSDRLASEDGGAVPDGRGSSRAGEGGAEESTAPRPVILAGSLSELPQSMRLG------GAVVFTNLSSPEAWRWLTEWAQRSKEGSQDLAANDIVVVHCRLRADGRCDVGDCLEKLYAMGFRSLMVEGGATVIASFLRGCGEEVGVGEGVHNVDGQLVDRVVVTIAPMFLQ----GYNVLATEAGP 1188
            + +  PFVTLT+AQS+D  IAG    Q+ LSG ES++MTH +R++HD IL+G GT   D+P+LN RH PP DP   PS  D N                                     PRP+IL   L   P    L       G   +   + P      TEW  R    + + A   +VV+      +G   +   L+ +Y +G RS+MVEGGA VI SF     + +            LVD  ++TIAP+F+      YNV   E GP
Sbjct:   19 IEQSTPFVTLTFAQSLDAKIAGKGGKQLILSGKESMVMTHWMRTMHDGILIGIGTALNDDPQLNTRHLPPKDPD--PSVNDHN--------------------------------NSYNLPRPMILDTKLRLNPHCKLLKNYAAGEGRRPWLICAEPSQTSERTEWLTR--RNTLEKAGARMVVLETGHDTEGYLPISLVLQTVYKLGIRSVMVEGGAQVIRSFFSQQNDTLPT--------RSLVDTAIITIAPIFVGEDGVSYNV---ETGP 245          
BLAST of mRNA_P-fluviatile_contig1.229.1 vs. uniprot
Match: D8QL00_SCHCM (2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate reductase n=1 Tax=Schizophyllum commune (strain H4-8 / FGSC 9210) TaxID=578458 RepID=D8QL00_SCHCM)

HSP 1 Score: 119 bits (298), Expect = 5.820e-27
Identity = 93/273 (34.07%), Postives = 128/273 (46.89%), Query Frame = 1
Query:  409 RPFVTLTYAQSIDGSIAGANKTQVFLSGSESLMMTHGLRSIHDAILVGAGTVRQDNPRLNVRHWPPVDPSAFPSARDENINSDSGSDRLASEDGGAVPDGRGSSRAGEGGAEESTAPRPVILAGSLSELPQSMRLGGAV--------VFT--NLSSPEAWRWLTEWAQRSKEGSQDLAANDIVVVHCRLRADGRCDVGDCLEKLYAMGFRSLMVEGGATVIASFLRGCGEEVGVGEGVHNVDGQLVDRVVVTIAPMFLQ----GYNVLATEAG 1185
            RP VTLT+AQS+D  IAG    Q+ LSG ES++MTH +R++HDAIL+G GT   D+P+LN RH P   P  + S+ +                                  +    PRPVIL   L   P    LG           VFT    +SP   + + EW +R K+  ++  A  +V+V   L  +G   +   L+ L+  G  SLMVEGGA+VI SFL                 G +VD ++VT+AP F+     GY V   E+G
Sbjct:   26 RPSVTLTFAQSLDAKIAGTGGKQLILSGKESMIMTHWMRTMHDAILIGVGTALNDDPQLNARHLPARSPGTYESSSEHG--------------------------------QPYNLPRPVILDARLRLSPSCKLLGNFQSGTGRRPWVFTLDGSASPNPLQQV-EWLER-KQALEEAGAR-VVIVKGDL-GNGTLSIQALLKTLHERGVHSLMVEGGASVIKSFLDAS-------------QGGVVDTIIVTVAPTFVGEDGVGYGVQLGESG 249          
BLAST of mRNA_P-fluviatile_contig1.229.1 vs. uniprot
Match: A0A8E2J751_9APHY (2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate reductase n=1 Tax=Obba rivulosa TaxID=1052685 RepID=A0A8E2J751_9APHY)

HSP 1 Score: 119 bits (299), Expect = 9.650e-27
Identity = 87/260 (33.46%), Postives = 120/260 (46.15%), Query Frame = 1
Query:  409 RPFVTLTYAQSIDGSIAGANKTQVFLSGSESLMMTHGLRSIHDAILVGAGTVRQDNPRLNVRHWPPVDPSAFPSARDENINSDSGSDRLASEDGGAVPDGRGSSRAGEGGAEESTAPRPVILAGSLSELPQSMRLG------GAVVFTNLSSPEAWRWLTEWAQRSKEGSQDLAANDIVVVHCRLRADGRCDVGDCLEKLYAMGFRSLMVEGGATVIASFLRGC------GEEVGVGEGVHNVDGQLVDRVVVTIAPMFL 1152
            RP+VTLT+AQS+D  IAG    Q+ LSG ESL+MTH +R++HDAIL+G GT   D+P+LN RH PP+   A                                         + + PRP++L   L   PQ   L       G   +   + P++   L +W +R +   +D  A  +VV       DGR  +   L KL     RS+MVEGGA +I SFL          E+   GE    +    VD +VVT+AP F+
Sbjct:   56 RPYVTLTFAQSLDAKIAGPGGKQLALSGRESLVMTHWMRTMHDAILIGVGTALNDDPQLNTRHLPPLPVHAI---------------------------------------YDYSTPRPIVLDTRLRLRPQCKLLRNFKEGRGRRPWVICAIPDSADQLEDWVER-RTALEDEGAKVLVVK----AQDGRIHIPTLLSKLRKRRIRSVMVEGGAQIIQSFLAAXXXXXXEAEDFKAGEDTEELPRSAVDMIVVTVAPTFV 271          
BLAST of mRNA_P-fluviatile_contig1.229.1 vs. uniprot
Match: A0A8H6XW19_9AGAR (2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate reductase n=1 Tax=Mycena venus TaxID=2733690 RepID=A0A8H6XW19_9AGAR)

HSP 1 Score: 117 bits (294), Expect = 1.570e-26
Identity = 88/257 (34.24%), Postives = 118/257 (45.91%), Query Frame = 1
Query:  409 RPFVTLTYAQSIDGSIAGANKTQVFLSGSESLMMTHGLRSIHDAILVGAGTVRQDNPRLNVRHWPPVDPSAFPSARDENINSDSGSDRLASEDGGAVPDGRGSSRAGEGGAEESTAPRPVILAGSLSELPQSMRLGGAVVFTNLSSPEAWRWLTEWAQRSKEGSQDLAANDIVVVHCRLRA----DGRCDVGDCLEKLYAMGFRSLMVEGGATVIASFLRGCGEEVGVGEGVHNVDGQLVDRVVVTIAPMFLQGYNV 1167
            RPFVTLT+AQS+DG IAGA   Q+ LSG ES++MTH LR++HDAILVG+GT   D+P+LN RH PP+ P + P                                          APRP+IL   L  LP S +L     + N        W+   A RS++   D     +     R+      D    +   L  L A G RSLMVEGGA +I++F               +V  + VD V++T AP+ +    V
Sbjct:   25 RPFVTLTFAQSLDGKIAGAGGKQLALSGKESMVMTHWLRTLHDAILVGSGTALNDDPQLNTRHLPPLPPDSPPYP----------------------------------------APRPIILDTRL-RLPSSCKL--LKNYANGKGTGRRPWVVSCAPRSQDAEWDARRQALERAGARVLLLPSDDESGRIQALLSLLCAEGIRSLMVEGGAQIISAFF--------------DVATECVDTVLITTAPLIVGAKGV 224          
BLAST of mRNA_P-fluviatile_contig1.229.1 vs. uniprot
Match: A0A2P6BX91_9BACT (GTP cyclohydrolase-2 n=1 Tax=Salinibacter sp. 10B TaxID=1923971 RepID=A0A2P6BX91_9BACT)

HSP 1 Score: 121 bits (304), Expect = 1.790e-26
Identity = 103/294 (35.03%), Postives = 136/294 (46.26%), Query Frame = 1
Query:  409 RPFVTLTYAQSIDGSIAGANKTQVFLSGSESLMMTHGLRSIHDAILVGAGTVRQDNPRLNVRHWPPVDPSAFPSARDENINSDSGSDRLASEDGGAVPDGRGSSRAGEGGAEESTAPRPVILAGSLSELPQSMRLGGAVVFTNLSSPEAWRWLTEWAQRSKEGSQDLAANDIVVVHCRLRADGRCDVGDCLEKLYAMGFRSLMVEGGATVIASFLRGCGEEVGVGEGVHNVDGQLVDRVVVTIAPMFLQGYNVLATEAGPDDASTARPRSGFPLPLLDVGYVRLGQDLVVVGAP 1290
            RPFVTLTYAQS+DGSIA  + + + +SGSES+  TH LR+ HDAILVG GTV  D+PRLNVRH     P+  P   D  +   + + RL S +G                      P+P+I                    TN  +P+             +    L A    VV       G C +   +E L   G  S+MVEGG  VI+SF+R                 Q+VD +++T+APMF+ G   L+T A   D + A   S FP  L  V Y  LG+DLV+ G P
Sbjct:  231 RPFVTLTYAQSLDGSIATDDGSPLAISGSESMSFTHQLRATHDAILVGIGTVLSDDPRLNVRHSSGKHPT--PVVLDSQLRFPTDA-RLLSREG----------------------PKPIIA-------------------TNDKAPD-------------DRKHALEAEGATVVRLSCDPRGIC-LDPLMEDLAERGVESVMVEGGTEVISSFMR----------------QQMVDHLILTVAPMFVGGQRALSTLASDTDDAEA---SSFP-ELDHVRYRWLGKDLVLEGMP 446          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.229.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JCF0_9PHAE7.240e-14466.94RibD_C domain-containing protein n=1 Tax=Ectocarpu... [more]
D8LE35_ECTSI8.650e-11469.96RibD_C domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A835YLP6_9STRA1.530e-4843.03Dihydrofolate reductase-like domain-containing pro... [more]
A0A2H3JBV3_WOLCO5.340e-2936.672,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-p... [more]
A0A8H5LT06_9AGAR1.720e-2733.472,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-p... [more]
A0A1Q3DY39_LENED5.200e-2733.212,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-p... [more]
D8QL00_SCHCM5.820e-2734.072,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-p... [more]
A0A8E2J751_9APHY9.650e-2733.462,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-p... [more]
A0A8H6XW19_9AGAR1.570e-2634.242,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-p... [more]
A0A2P6BX91_9BACT1.790e-2635.03GTP cyclohydrolase-2 n=1 Tax=Salinibacter sp. 10B ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:2866441..2870168 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score121.3
Seed ortholog evalue9.8e-25
Seed eggNOG ortholog5334.XP_003026331.1
KEGG rclassRC00933
KEGG koko:K14654
KEGG ReactionR09375,R09376
KEGG Pathwayko00740,ko01100,map00740,map01100
EggNOG free text desc.RibD C-terminal domain
EggNOG OGs22FC0@155619,2S17A@2759,39JUN@33154,3Q52X@4751,3V1EW@5204,3WA1R@5338,COG1985@1
EC1.1.1.302
COG Functional cat.H
Best tax levelAgaricales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionDihydrofolate reductase-like domain
Ec32 orthologEc-05_004210.1
Exons6
Model size1418
Cds size1161
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.229.1prot_P-fluviatile_contig1.229.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig1 2866594..2870064 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815309.651232-UTR-P-fluviatile_contig1:2866440..28665931622815309.651232-UTR-P-fluviatile_contig1:2866440..2866593Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 2866441..2866593 +
1693561462.9483223-UTR-P-fluviatile_contig1:2866440..28665931693561462.9483223-UTR-P-fluviatile_contig1:2866440..2866593Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 2866441..2866593 +
1622815309.7285438-UTR-P-fluviatile_contig1:2870064..28701681622815309.7285438-UTR-P-fluviatile_contig1:2870064..2870168Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 2870065..2870168 +
1693561463.128756-UTR-P-fluviatile_contig1:2870064..28701681693561463.128756-UTR-P-fluviatile_contig1:2870064..2870168Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 2870065..2870168 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815309.6657157-CDS-P-fluviatile_contig1:2866593..28669171622815309.6657157-CDS-P-fluviatile_contig1:2866593..2866917Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2866594..2866917 +
1693561463.0649433-CDS-P-fluviatile_contig1:2866593..28669171693561463.0649433-CDS-P-fluviatile_contig1:2866593..2866917Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2866594..2866917 +
1622815309.6772928-CDS-P-fluviatile_contig1:2867631..28677351622815309.6772928-CDS-P-fluviatile_contig1:2867631..2867735Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2867632..2867735 +
1693561463.0763159-CDS-P-fluviatile_contig1:2867631..28677351693561463.0763159-CDS-P-fluviatile_contig1:2867631..2867735Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2867632..2867735 +
1622815309.6881824-CDS-P-fluviatile_contig1:2868239..28685181622815309.6881824-CDS-P-fluviatile_contig1:2868239..2868518Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2868240..2868518 +
1693561463.091923-CDS-P-fluviatile_contig1:2868239..28685181693561463.091923-CDS-P-fluviatile_contig1:2868239..2868518Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2868240..2868518 +
1622815309.6991794-CDS-P-fluviatile_contig1:2869063..28692261622815309.6991794-CDS-P-fluviatile_contig1:2869063..2869226Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2869064..2869226 +
1693561463.1002276-CDS-P-fluviatile_contig1:2869063..28692261693561463.1002276-CDS-P-fluviatile_contig1:2869063..2869226Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2869064..2869226 +
1622815309.7102628-CDS-P-fluviatile_contig1:2869542..28697381622815309.7102628-CDS-P-fluviatile_contig1:2869542..2869738Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2869543..2869738 +
1693561463.1088057-CDS-P-fluviatile_contig1:2869542..28697381693561463.1088057-CDS-P-fluviatile_contig1:2869542..2869738Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2869543..2869738 +
1622815309.7192013-CDS-P-fluviatile_contig1:2869969..28700641622815309.7192013-CDS-P-fluviatile_contig1:2869969..2870064Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2869970..2870064 +
1693561463.1212125-CDS-P-fluviatile_contig1:2869969..28700641693561463.1212125-CDS-P-fluviatile_contig1:2869969..2870064Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2869970..2870064 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig1.229.1

>prot_P-fluviatile_contig1.229.1 ID=prot_P-fluviatile_contig1.229.1|Name=mRNA_P-fluviatile_contig1.229.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=387bp
MLRHVATTAIALIAPLSDPTATAAATAVSNARYTTKTSRGDAPLPNQQLG
QQQLRRTIEESVLNGLITGILAHCDRVERGELRRRRPFVTLTYAQSIDGS
IAGANKTQVFLSGSESLMMTHGLRSIHDAILVGAGTVRQDNPRLNVRHWP
PVDPSAFPSARDENINSDSGSDRLASEDGGAVPDGRGSSRAGEGGAEEST
APRPVILAGSLSELPQSMRLGGAVVFTNLSSPEAWRWLTEWAQRSKEGSQ
DLAANDIVVVHCRLRADGRCDVGDCLEKLYAMGFRSLMVEGGATVIASFL
RGCGEEVGVGEGVHNVDGQLVDRVVVTIAPMFLQGYNVLATEAGPDDAST
ARPRSGFPLPLLDVGYVRLGQDLVVVGAPASRRDSL*
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mRNA from alignment at P-fluviatile_contig1:2866441..2870168+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig1.229.1 ID=mRNA_P-fluviatile_contig1.229.1|Name=mRNA_P-fluviatile_contig1.229.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3728bp|location=Sequence derived from alignment at P-fluviatile_contig1:2866441..2870168+ (Porterinema fluviatile SAG_2381)
GATGTCTCTCTGTCTGGCTTCACTCCTCTTGGTATTCTCCTGCTTACCTC AGCCCGTGCTGTACGCCCAGCACACGTAACTTGACGCACTGTACGGCGCG TACAGGACGGTGGGGGCGAAACGTGACCATCATCTGTTTTTAAACTCCTG CTCATGCTCAGACATGTTGCGACCACAGCAATTGCGCTGATTGCCCCGCT CTCCGACCCCACAGCCACAGCGGCGGCGACAGCTGTGAGCAACGCCCGGT ACACCACGAAGACCTCCCGCGGTGATGCTCCTTTGCCGAACCAGCAGCTG GGTCAGCAGCAGCTTCGCCGTACGATCGAAGAAAGCGTGCTGAACGGCTT GATCACCGGCATCCTGGCGCACTGCGATAGGGTCGAGAGAGGGGAGCTGC GCCGCCGCCGCCCTTTCGTAACGCTGACCTACGCCCAGAGCATCGACGGC AGCATCGCGGGCGCGAACAAGACCCAGGTATGGAGAGAGATGACGGCGAG GTTCGAAATCAGCGCAACGGCAGGTGCTACATGTTGTTGTTTTTGCTTCC CCGTGCCAATTATTTGTTAGAGAACACTGCCGCAACCGCACGCAGTTGGC ATCACGCGCCAGTCCTCCGCGCGAAACATTTGGTCTCGTGTCTGACAGCG CACTTGAGACAAGGGCCTCTGGGATACCCTCTGTTAGTACAATGGAAAGC TCCACACGACGTACTTTTTCGACCCGCCCGATAACAACCACCTTCGTAGA TGAGGTTCTTCTGACAACCGAGCACGGAACAGCGTGGGCCCACTTGAGTA CCCTTTGCAGCTACACGGGGTCACAGGTCGGCGCCTCCACTCTCTGACTA TTCGCGGCGCTGAATGAAGGAACCAAGTCTTCAACGTTCAAGTTTGACAC TGTCATCGCGACGCTGCTCCCAGTTTTGCAAGCGCTAGCAGCGGCTAAAA TCAGTCAACATTGGCACAGACGTAAGTACTCACACTTGGCCACATCCTTT GCGGCCCACAAACTGAAGTCACATTGAAGTTTTCCTTCTTCTAGTGATAG ACGAATCATTCATATCAGCAGCTTTAATTCATGCCTGCCCCCTGCTTTGT CCCTCTGTGTGCATTAGACCGCAAAACGAGAATACTTCTGTGCCCTTTTC TCGCGGCCTTCCGGCTTCGCCCGCTTCTATTTTCTTTATAGGTTTTTCTC AGCGGCTCGGAGAGCTTAATGATGACGCATGGCTTACGATCCATCCACGA CGCTATTCTTGTGGGTGCAGGAACGGTGCGACAAGATAATCCCAGGTTCG TGGGGCACTTTTGAAGACGGTTGAATTTTCGCAAAAAAAGTACTTGATAA GCACGAGGATGGCAGGGTAATCGTAAGTACAGATCACTTCGATGTCAAGT TTTTGGTTGTTTTGGCTGATTTCTTGTCTGCTCAGGGGTTTATGCTCGGA TATGGGATTCTTTCGCCACATGCGCAATCTGTCAGTCTTCCTTTGCTGGG TGTGCCTTAGCACGGGTGGCTTTTTTGTATTTTCTCCTCCTTTTGGTTTG TAGAAATCGGGGGGGTGTGATCGCTTGAGAAAAGCGTACGAAAGATTTCC GTCGACGCCCACCGACCCTCCCAACGGACCAACCCCGTCGTGGACATGAA CTGCATGATCCAGCTCTGATTGCCGTGGTCTGTACACCTTCAATGCACCC GATGGGACGTGTCCTGGCTCGCGCGAACAAACTTTCGATTTGTTTTTGCA CACGACACTTGCCATCGCTTTCCTTTACCACTGCCGCAACAACCCATAGG CTCAACGTCCGGCACTGGCCTCCAGTAGATCCATCCGCGTTCCCGTCCGC ACGCGACGAAAACATCAATAGTGATAGCGGTAGCGACCGTCTTGCCTCCG AGGACGGAGGCGCCGTCCCCGACGGACGGGGCAGCAGCCGCGCCGGCGAG GGCGGAGCAGAAGAATCAACGGCCCCGAGGCCGGTCATCCTGGCCGGCAG CCTCAGCGAGCTGCCTCAGTCCATGCGCTTGGGCGGCGCGGTGGTCTTCA CGAACCTGTCGTCTCCCGAAGCCTGGAGGTAAGGACGGAGGTGAGCGCGG TGGGCGACTTGCTCGTTCGCGCTGTCTCCGGGATCTGCCAAGGCACTCGC CGCAGTCCTGTCGTAAGGGTGATGAGGTCCTTGGGTACGGTGAACATCTG CCGCTGCGTCAAGTAATGAGACGCAGGACTGCGCCGTGCAGAAGGCTCAA CGAGTTTGTTGTTTTTCAGGAGGTTGATGACGTACCGGGCGTATCCTGTT TGCCGTGGAAGATTTTGTATGTGAGCCTAAGCTTCTTGGCGTGTGCCGAA GCTTCATTGCCTAATGCCCTTGCGCCATGATGTGATCGATGACCGTCACA GAGAGAGCTGTACGCAATCCTGTTCTTTTGTGCAGGCTGACGAGATTGGG GTCGAGGTAGCTGAATTCGTGTCCTTTAAACCGCAACGCATCTGAGTTCT TCACATCTCAGGCGGAATACCCTCATCATCAGATCCCTTATCAAATCGAC AACACACTCAGACGTTCCCATCGAGACTTTCCGATGTTCCCTTCTTTTCG CTGCTTTGCTTCGATGGGTTAAGATGGCTGACCGAATGGGCCCAAAGAAG CAAGGAGGGCTCGCAAGACCTTGCAGCGAACGATATCGTGGTCGTCCACT GTCGCTTGAGAGCTGACGGCCGCTGCGACGTGGGCGACTGTCTAGAGAAG CTCTACGCAATGGGCTTCAGGAGTCTTATGGTCGAGGTTGGTTCTTTTGC GCCTTTTTTTTGCGCTCACTTAGTTGACCACTTGACGGAGCGCTTGAGCT TCAACATGTCCGTGTCAACCAACGGTTTTCGAGGACTTCCTCTTGTTTTG TGAATACGTTGGCGCACCTCTAGAGGCACACCCCCACCCCACGATACCTC GTGTACGACGCACGTCTTAACTCTTGAAGGTTGTCCTGTGCGTCTTGGTC AGCTCTTCATTTTCTCAGGATAGTTTGCCAAGCAGCCCCCTTTTGGACCT CTCTGTGTGTTGACCGATTGTTTTGGACCGCATGCCTTCCTCGCGTGTCC AGGGAGGGGCTACGGTAATCGCGTCGTTTTTGCGGGGATGTGGGGAGGAG GTGGGCGTGGGCGAAGGCGTCCATAACGTTGACGGGCAGCTCGTGGACCG TGTTGTGGTAACGATCGCCCCGATGTTCCTGCAAGGATACAACGTATTGG CCACAGAAGCCGGCCCTGACGACGCATCTACCGCCAGGCCTAGATCAGGT ACGGAGGAGCAAGTGCCGACCTTCACCGAAGATTCGGACCGAAGTAATTG TACAGCTTTTGTTGCATAGCCACTGTGGTTCGTGCAGCCATTCGAGTGAA CTCTGGAGAAAGCCCGTGAGTCTTGGAGGTCGAGCTAAAAAACCAAGATT CGTCAGCTGTGCAACAACGCACAAGCTTCCTCTGATCTTCTCTTCGATTT GTGCACCCAACGATATGCCTCGTCATCAGGGTTCCCCTTGCCTCTGCTCG ACGTGGGCTACGTGCGACTGGGGCAGGATCTGGTGGTGGTGGGTGCGCCG GCCAGCCGCAGGGACTCGTTGTGACGCCATCCCTGCTCACGTGGTGGGAT TAACGTGCCGCGCTGAAGGAATTGACGACTGGACGCGGCCCATGGGTGGT GTTCGACGACAGCGATTAGACAGAGACC
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Coding sequence (CDS) from alignment at P-fluviatile_contig1:2866441..2870168+

>mRNA_P-fluviatile_contig1.229.1 ID=mRNA_P-fluviatile_contig1.229.1|Name=mRNA_P-fluviatile_contig1.229.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2322bp|location=Sequence derived from alignment at P-fluviatile_contig1:2866441..2870168+ (Porterinema fluviatile SAG_2381)
ATGCTCAGACATGTTGCGACCACAGCAATTGCGCTGATTGCCCCGCTCTC
CGACCCCACAGCCACAGCGGCGGCGACAGCTGTGAGCAACGCCCGGTACA
CCACGAAGACCTCCCGCGGTGATGCTCCTTTGCCGAACCAGCAGCTGGGT
CAGCAGCAGCTTCGCCGTACGATCGAAGAAAGCGTGCTGAACGGCTTGAT
CACCGGCATCCTGGCGCACTGCGATAGGGTCGAGAGAGGGGAGCTGCGCC
GCCGCCGCCCTTTCGTAACGCTGACCTACGCCCAGAGCATCGACGGCAGC
ATCGCGGGCGCGAACAAGACCCAGATGCTCAGACATGTTGCGACCACAGC
AATTGCGCTGATTGCCCCGCTCTCCGACCCCACAGCCACAGCGGCGGCGA
CAGCTGTGAGCAACGCCCGGTACACCACGAAGACCTCCCGCGGTGATGCT
CCTTTGCCGAACCAGCAGCTGGGTCAGCAGCAGCTTCGCCGTACGATCGA
AGAAAGCGTGCTGAACGGCTTGATCACCGGCATCCTGGCGCACTGCGATA
GGGTCGAGAGAGGGGAGCTGCGCCGCCGCCGCCCTTTCGTAACGCTGACC
TACGCCCAGAGCATCGACGGCAGCATCGCGGGCGCGAACAAGACCCAGGT
TTTTCTCAGCGGCTCGGAGAGCTTAATGATGACGCATGGCTTACGATCCA
TCCACGACGCTATTCTTGTGGGTGCAGGAACGGTGCGACAAGATAATCCC
AGGTTTTTCTCAGCGGCTCGGAGAGCTTAATGATGACGCATGGCTTACGA
TCCATCCACGACGCTATTCTTGTGGGTGCAGGAACGGTGCGACAAGATAA
TCCCAGGCTCAACGTCCGGCACTGGCCTCCAGTAGATCCATCCGCGTTCC
CGTCCGCACGCGACGAAAACATCAATAGTGATAGCGGTAGCGACCGTCTT
GCCTCCGAGGACGGAGGCGCCGTCCCCGACGGACGGGGCAGCAGCCGCGC
CGGCGAGGGCGGAGCAGAAGAATCAACGGCCCCGAGGCCGGTCATCCTGG
CCGGCAGCCTCAGCGAGCTGCCTCAGTCCATGCGCTTGGGCGGCGCGGTG
GTCTTCACGAACCTGTCGTCTCCCGAAGCCTGGAGGCTCAACGTCCGGCA
CTGGCCTCCAGTAGATCCATCCGCGTTCCCGTCCGCACGCGACGAAAACA
TCAATAGTGATAGCGGTAGCGACCGTCTTGCCTCCGAGGACGGAGGCGCC
GTCCCCGACGGACGGGGCAGCAGCCGCGCCGGCGAGGGCGGAGCAGAAGA
ATCAACGGCCCCGAGGCCGGTCATCCTGGCCGGCAGCCTCAGCGAGCTGC
CTCAGTCCATGCGCTTGGGCGGCGCGGTGGTCTTCACGAACCTGTCGTCT
CCCGAAGCCTGGAGATGGCTGACCGAATGGGCCCAAAGAAGCAAGGAGGG
CTCGCAAGACCTTGCAGCGAACGATATCGTGGTCGTCCACTGTCGCTTGA
GAGCTGACGGCCGCTGCGACGTGGGCGACTGTCTAGAGAAGCTCTACGCA
ATGGGCTTCAGGAGTCTTATGGTCGAGATGGCTGACCGAATGGGCCCAAA
GAAGCAAGGAGGGCTCGCAAGACCTTGCAGCGAACGATATCGTGGTCGTC
CACTGTCGCTTGAGAGCTGACGGCCGCTGCGACGTGGGCGACTGTCTAGA
GAAGCTCTACGCAATGGGCTTCAGGAGTCTTATGGTCGAGGGAGGGGCTA
CGGTAATCGCGTCGTTTTTGCGGGGATGTGGGGAGGAGGTGGGCGTGGGC
GAAGGCGTCCATAACGTTGACGGGCAGCTCGTGGACCGTGTTGTGGTAAC
GATCGCCCCGATGTTCCTGCAAGGATACAACGTATTGGCCACAGAAGCCG
GCCCTGACGACGCATCTACCGCCAGGCCTAGATCAGGGAGGGGCTACGGT
AATCGCGTCGTTTTTGCGGGGATGTGGGGAGGAGGTGGGCGTGGGCGAAG
GCGTCCATAACGTTGACGGGCAGCTCGTGGACCGTGTTGTGGTAACGATC
GCCCCGATGTTCCTGCAAGGATACAACGTATTGGCCACAGAAGCCGGCCC
TGACGACGCATCTACCGCCAGGCCTAGATCAGGGTTCCCCTTGCCTCTGC
TCGACGTGGGCTACGTGCGACTGGGGCAGGATCTGGTGGTGGTGGGTGCG
CCGGCCAGCCGCAGGGACTCGTTGTGAGGTTCCCCTTGCCTCTGCTCGAC
GTGGGCTACGTGCGACTGGGGCAGGATCTGGTGGTGGTGGGTGCGCCGGC
CAGCCGCAGGGACTCGTTGTGA
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