mRNA_P-fluviatile_contig1.222.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig1.222.1 vs. uniprot
Match: D8LE47_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE47_ECTSI) HSP 1 Score: 229 bits (584), Expect = 4.530e-72 Identity = 112/142 (78.87%), Postives = 128/142 (90.14%), Query Frame = 1
Query: 1 MNRLVKFGVEALKPQKIAGVHKWRSPMVSRRKANVLRKKALRDGSFGSVIIDKDTGKAIGGWDPEWDVLITSPAPRPLMPPKLHKNQRDRVQRAEKITAKLGEQQARLKDLNRVKAVPKPKPEEGTLALIRWLNLNRSSKDR 426
MNRLV+FG EALKPQ++AG HKW++P VSRRKANVLRKKA+RDGSFGSV++D DTGKAIGGWDP WD+ +PAPRPL PPKLHKNQRDR QRAEKITAKLGEQ+ARLKDLNRVKAVPKPKPE+GTLAL+RWL + ++K R
Sbjct: 1 MNRLVRFGAEALKPQRVAGAHKWQTPRVSRRKANVLRKKAIRDGSFGSVVMDADTGKAIGGWDPAWDIF-EAPAPRPLRPPKLHKNQRDRAQRAEKITAKLGEQEARLKDLNRVKAVPKPKPEDGTLALLRWLKTSGAAKKR 141
BLAST of mRNA_P-fluviatile_contig1.222.1 vs. uniprot
Match: A0A6H5JCG4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG4_9PHAE) HSP 1 Score: 227 bits (578), Expect = 3.350e-70 Identity = 110/142 (77.46%), Postives = 128/142 (90.14%), Query Frame = 1
Query: 1 MNRLVKFGVEALKPQKIAGVHKWRSPMVSRRKANVLRKKALRDGSFGSVIIDKDTGKAIGGWDPEWDVLITSPAPRPLMPPKLHKNQRDRVQRAEKITAKLGEQQARLKDLNRVKAVPKPKPEEGTLALIRWLNLNRSSKDR 426
MNRLV+FG EALKPQ++AG HKW++P VSRRKANVLRKKA+RDGSFGS++ID+DTGKAIGGWDP WD+ +PAPRPL PPKLHKNQRDR QRA+KITAKLGEQ+ARLKDLNRVKAVPKPKPE+G LAL+RWL + ++K R
Sbjct: 68 MNRLVRFGAEALKPQRVAGAHKWQTPRVSRRKANVLRKKAIRDGSFGSIVIDEDTGKAIGGWDPAWDIF-EAPAPRPLRPPKLHKNQRDRAQRADKITAKLGEQEARLKDLNRVKAVPKPKPEDGALALLRWLKNSGAAKKR 208
BLAST of mRNA_P-fluviatile_contig1.222.1 vs. uniprot
Match: A0A7S4KCW7_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4KCW7_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 3.070e-12 Identity = 54/133 (40.60%), Postives = 76/133 (57.14%), Query Frame = 1
Query: 10 LVKFGVEALKPQKIAGVHKWRSPMVSRRKANVLRKKALRDGSFGSVIIDKDTGKAIGGWDPEWDV--LITSPAPRPLMPPKLHKNQRDRVQRAEKITAKLGEQQARLKDLNRVKAVPKPKPEEGTLALIRWLN 402
L++ G +AL+PQ + KWR P++S RKA V+RK A++DG++GS D + GK GW+P WD ITS L PK K +R R RA KI + L + R++ K KP+P G L LI+ +N
Sbjct: 19 LIRHGEQALRPQFVN--EKWRRPLISMRKAAVIRKGAIKDGTYGSF--DPENGK---GWNPMWDTPRKITS-----LRLPKETKRERTREARASKIESLLEQADDRIETYRLEKEALKPEP--GVLNLIKKMN 137
BLAST of mRNA_P-fluviatile_contig1.222.1 vs. uniprot
Match: A0A7S1BP69_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BP69_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 1.890e-11 Identity = 46/120 (38.33%), Postives = 64/120 (53.33%), Query Frame = 1
Query: 1 MNRLVKFGVEALKPQKIAGVHKWRSPMVSRRKANVLRKKALRDGSFGSVIIDKDTGKAIGGWDPEWDVLITSPAPRPLMPPKLHKNQRDRVQRAEKITAKLGEQQARLKDLNRVKAVPKP 360
+ +LV+FG AL+PQ + G +WR P +S R A +RK+++ G++G+ D TG GWDP WD L PPKLHKN RDR RA I + + R+ + K KP
Sbjct: 12 IRKLVQFGEAALRPQLVNG--RWRKPQISPRYAARIRKESIACGTYGTF--DPTTGS---GWDPAWDSPGRIGTTSALRPPKLHKNYRDRENRATNIESLMEGMDERIDQFRKEKQDKKP 124
BLAST of mRNA_P-fluviatile_contig1.222.1 vs. uniprot
Match: A0A7S0AE13_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AE13_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 1.300e-9 Identity = 46/121 (38.02%), Postives = 67/121 (55.37%), Query Frame = 1
Query: 10 LVKFGVEALKPQKIAGVHKWRSPMVSRRKANVLRKKALRDGSFGSVIIDKDTGKAIGGWDPEWDV--LITSPAPRPLMPPKLHKNQRDRVQRAEKITAKLGEQQARLKDLNRVKAVPKPKP 366
L + G EA KPQ + WR P VS R+A VLRK A+RDG++G+ D TG+ GWDP WD ++S + PPK K +R R RA++I L + +++ + + KP+P
Sbjct: 36 LKRHGEEAFKPQFVK--ESWRKPAVSGREAAVLRKAAVRDGTYGAF--DPQTGR---GWDPLWDKPGKVSS-----IRPPKETKRERTRESRAQRIEQLLEQADEKIESYRKAQLEKKPEP 144
BLAST of mRNA_P-fluviatile_contig1.222.1 vs. uniprot
Match: A0A7R9ZNN0_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZNN0_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 1.550e-8 Identity = 46/118 (38.98%), Postives = 61/118 (51.69%), Query Frame = 1
Query: 1 MNRLVKFGVEALKPQKIAG-----------VHKWRSPMVSRRKANVLRKKALRDGSFGSVIIDKDTGKAIGGWDPEWDVLI------TSPAPRPLMPPKLHKNQRDRVQRAEKITAKL 303
+ L + G EALKPQK+ H WR P+VS+R VLRK+ALRDG++G+ D TG GWDP WD ++ S R + P K +R R +RA+KI L
Sbjct: 5 LRHLCQKGAEALKPQKVLSKAAENGFTYKETHVWRRPVVSKRVGKVLRKQALRDGTYGTF--DVTTGV---GWDPLWDPVLMPNQFKVSRYGR-MQPKKKTSRERTREERAQKIEKNL 116
BLAST of mRNA_P-fluviatile_contig1.222.1 vs. uniprot
Match: A0A024GL61_9STRA (Mitoc_mL59 domain-containing protein n=3 Tax=Albugo TaxID=65356 RepID=A0A024GL61_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 3.720e-7 Identity = 49/139 (35.25%), Postives = 73/139 (52.52%), Query Frame = 1
Query: 1 MNRLVKFGVE----ALKPQKIAGVHKWRSPMVSRRKANVLRKKALRDGSFGSVIIDKDTGKAIGGWDPEWDVLITSPAPRPLM-PPKLHKNQRDRVQRAEKITAKLGEQQARLKDLNRVKAVPKPKPEEGTLALIRWLN 402
+ R+++ E AL+P + G KWR P++S R+A +L+K+A + G I+ GGW PEWD P +M PPK HKNQR+ +R KI A L + +L++ KA+ KP +G L WL+
Sbjct: 3 LRRMLRLSAEEAGAALRPTFVDG--KWRQPLLSSRRAVMLKKRAQAENLVGKWIVGH------GGWLPEWD----KPNKHHVMRPPKGHKNQRNVHERVAKIQAALDKMPQKLEEHR--KAIKSAKPLQG---LELWLS 124
BLAST of mRNA_P-fluviatile_contig1.222.1 vs. uniprot
Match: A0A7S3H3W9_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H3W9_9STRA) HSP 1 Score: 57.0 bits (136), Expect = 2.410e-6 Identity = 41/120 (34.17%), Postives = 64/120 (53.33%), Query Frame = 1
Query: 10 LVKFGVEALKPQKIAGVHKWRSPMVSRRKANVLRKKALRDGSFGSVIIDKDTGKAIGGWDPEWDVLITSPAPRPLMPPKLHKNQRDRVQRAEKITAKLGEQQARLKDLNRVKAVPKPKPE 369
L G +AL P + G ++ +P+VS+R A +RK+AL +G+FG + ++ GGWDP+WD+ T L P K H +R R +RA KIT + R+ + A +PK +
Sbjct: 23 LTLHGGDALLPAMVKG--RYIAPLVSKRVAADIRKRALIEGTFGEFVPNE------GGWDPKWDIPKTMHI---LRPHKGHLRERTREKRANKITTAMAGMPERIAKYEQEVADRRPKKD 131 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.222.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig1.222.1 >prot_P-fluviatile_contig1.222.1 ID=prot_P-fluviatile_contig1.222.1|Name=mRNA_P-fluviatile_contig1.222.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=144bp MNRLVKFGVEALKPQKIAGVHKWRSPMVSRRKANVLRKKALRDGSFGSVIback to top mRNA from alignment at P-fluviatile_contig1:2784406..2787190- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig1.222.1 ID=mRNA_P-fluviatile_contig1.222.1|Name=mRNA_P-fluviatile_contig1.222.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2785bp|location=Sequence derived from alignment at P-fluviatile_contig1:2784406..2787190- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig1:2784406..2787190- >mRNA_P-fluviatile_contig1.222.1 ID=mRNA_P-fluviatile_contig1.222.1|Name=mRNA_P-fluviatile_contig1.222.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=864bp|location=Sequence derived from alignment at P-fluviatile_contig1:2784406..2787190- (Porterinema fluviatile SAG_2381)back to top |