mRNA_P-fluviatile_contig1.196.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig1.196.1 vs. uniprot
Match: D8LN84_ECTSI (Ribosomal protein rpl30 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LN84_ECTSI) HSP 1 Score: 211 bits (537), Expect = 4.170e-69 Identity = 107/111 (96.40%), Postives = 108/111 (97.30%), Query Frame = 1
Query: 1 MAPGKKSKKAIESMNARLQLVMKSGKTSLGYKSTIKSMRSTRAKMVLISNNCPPLRKSEIEYLAMLAKCTVHHYTGSNTDLGTACGKYFRVSVMSITDAGDSDILRQGAEA 333
MAPGKKSKKAIESMNARLQLVMKSGK SLGYKSTIKSMRSTRAKMVLISNNCPPLRKSEIEY AMLAKC VHHYTGSNTDLGTACGKYFRVSV+SITDAGDSDILRQGAEA
Sbjct: 1 MAPGKKSKKAIESMNARLQLVMKSGKASLGYKSTIKSMRSTRAKMVLISNNCPPLRKSEIEYFAMLAKCAVHHYTGSNTDLGTACGKYFRVSVLSITDAGDSDILRQGAEA 111
BLAST of mRNA_P-fluviatile_contig1.196.1 vs. uniprot
Match: A0A835YXX2_9STRA (Ribosomal protein rpl30 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXX2_9STRA) HSP 1 Score: 177 bits (450), Expect = 7.730e-56 Identity = 85/106 (80.19%), Postives = 98/106 (92.45%), Query Frame = 1
Query: 1 MAPGKKSKKAIESMNARLQLVMKSGKTSLGYKSTIKSMRSTRAKMVLISNNCPPLRKSEIEYLAMLAKCTVHHYTGSNTDLGTACGKYFRVSVMSITDAGDSDILR 318
MAP KK+KK IES+N RLQLVM+SGK SLGYK T+K MR+++AKM++ISNNCPPLRKSEIEY A+LAKC VHHY+GSNTDLGTACGKYFRVSV++ITDAGDSDILR
Sbjct: 1 MAPIKKAKKTIESINTRLQLVMRSGKASLGYKQTLKCMRTSKAKMIIISNNCPPLRKSEIEYYALLAKCNVHHYSGSNTDLGTACGKYFRVSVLAITDAGDSDILR 106
BLAST of mRNA_P-fluviatile_contig1.196.1 vs. uniprot
Match: A0A812PA55_SYMMI (RPL30 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812PA55_SYMMI) HSP 1 Score: 171 bits (434), Expect = 2.190e-53 Identity = 81/108 (75.00%), Postives = 101/108 (93.52%), Query Frame = 1
Query: 1 MAP--GKKSKKAIESMNARLQLVMKSGKTSLGYKSTIKSMRSTRAKMVLISNNCPPLRKSEIEYLAMLAKCTVHHYTGSNTDLGTACGKYFRVSVMSITDAGDSDILR 318
MAP GKK+KK +ES+N+RLQLVM+SGK SLGYK+TIK++R+T+AK+V+IS+NCPPLRKSEIEY AMLAKCTVHHY G+N+DLGTACGK++RVS++S+TD GDSDILR
Sbjct: 1 MAPAAGKKTKKTVESINSRLQLVMRSGKASLGYKTTIKTLRNTKAKLVIISSNCPPLRKSEIEYYAMLAKCTVHHYAGTNSDLGTACGKFYRVSMLSVTDGGDSDILR 108
BLAST of mRNA_P-fluviatile_contig1.196.1 vs. uniprot
Match: A0A7S3HF33_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HF33_9STRA) HSP 1 Score: 166 bits (420), Expect = 3.180e-51 Identity = 77/104 (74.04%), Postives = 99/104 (95.19%), Query Frame = 1
Query: 10 GKKSKKAIESMNARLQLVMKSGKTSLGYKSTIKSMRSTRAKMVLISNNCPPLRKSEIEYLAMLAKCTVHHYTGSNTDLGTACGKYFRVSVMSITDAGDSDILRQ 321
GKK+KKA+ES+N+++QLVMKSGKT+LGYK+TIK++R+ +AKMVLI++N PPLRKSE+EY AMLAKC VHHY G+N++LGTACGK++RVS++SITDAGDSDILRQ
Sbjct: 9 GKKTKKAVESINSKVQLVMKSGKTALGYKTTIKALRANKAKMVLIASNTPPLRKSEVEYYAMLAKCVVHHYAGNNSELGTACGKFYRVSMVSITDAGDSDILRQ 112
BLAST of mRNA_P-fluviatile_contig1.196.1 vs. uniprot
Match: A0A1Y1Z8Q1_9FUNG (60S ribosomal protein n=4 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Z8Q1_9FUNG) HSP 1 Score: 162 bits (410), Expect = 9.670e-50 Identity = 76/106 (71.70%), Postives = 97/106 (91.51%), Query Frame = 1
Query: 1 MAPGKKSKKAIESMNARLQLVMKSGKTSLGYKSTIKSMRSTRAKMVLISNNCPPLRKSEIEYLAMLAKCTVHHYTGSNTDLGTACGKYFRVSVMSITDAGDSDILR 318
MAP KKSKK++ES+N+RL LVMKSGK++LGYKST+KS+R+ +AK++++S NCPPLRKSEIEY AML+K +VHHY G+N +LGTACGKYFRV V++ITDAGDSDIL+
Sbjct: 1 MAPIKKSKKSVESINSRLALVMKSGKSNLGYKSTLKSIRNGKAKLIILSGNCPPLRKSEIEYYAMLSKTSVHHYNGNNIELGTACGKYFRVGVLAITDAGDSDILK 106
BLAST of mRNA_P-fluviatile_contig1.196.1 vs. uniprot
Match: A0A261XVZ6_9FUNG (60S ribosomal protein L30-1 n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261XVZ6_9FUNG) HSP 1 Score: 162 bits (409), Expect = 1.290e-49 Identity = 79/105 (75.24%), Postives = 95/105 (90.48%), Query Frame = 1
Query: 1 MAPGKKSKKAIESMNARLQLVMKSGKTSLGYKSTIKSMRSTRAKMVLISNNCPPLRKSEIEYLAMLAKCTVHHYTGSNTDLGTACGKYFRVSVMSITDAGDSDIL 315
MAP KKSKK++ES+N+RLQLVMKSGK +LGYKST+KS+R+ +AK++LI+ NCPPLRKSEIEY AML+K VHHYTG+N +LGTACGK FR SV+SITDAGDSDIL
Sbjct: 1 MAPVKKSKKSVESINSRLQLVMKSGKYNLGYKSTLKSVRAGKAKLILIAGNCPPLRKSEIEYYAMLSKTGVHHYTGNNIELGTACGKLFRCSVLSITDAGDSDIL 105
BLAST of mRNA_P-fluviatile_contig1.196.1 vs. uniprot
Match: A0A7S2AKD1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AKD1_9STRA) HSP 1 Score: 162 bits (410), Expect = 1.990e-49 Identity = 78/105 (74.29%), Postives = 94/105 (89.52%), Query Frame = 1
Query: 1 MAPGKKSKKAIESMNARLQLVMKSGKTSLGYKSTIKSMRSTRAKMVLISNNCPPLRKSEIEYLAMLAKCTVHHYTGSNTDLGTACGKYFRVSVMSITDAGDSDIL 315
MAPGKKSK+A+ES+N+RLQLVMKSGK LGYKST+KS+RS + KMV++SNN PPL+KSEIEY +MLAK TV HY+G+N+DLGTACGKYFRV +SI DAGDSDI+
Sbjct: 23 MAPGKKSKRAVESINSRLQLVMKSGKAELGYKSTLKSLRSGKCKMVILSNNTPPLKKSEIEYYSMLAKVTVTHYSGTNSDLGTACGKYFRVGTVSIIDAGDSDII 127
BLAST of mRNA_P-fluviatile_contig1.196.1 vs. uniprot
Match: L8GX53_ACACA (60S ribosomal protein, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GX53_ACACA) HSP 1 Score: 159 bits (403), Expect = 1.160e-48 Identity = 79/107 (73.83%), Postives = 91/107 (85.05%), Query Frame = 1
Query: 1 MAPGKKSKKAIESMNARLQLVMKSGKTSLGYKSTIKSMRSTRAKMVLISNNCPPLRKSEIEYLAMLAKCTVHHYTGSNTDLGTACGKYFRVSVMSITDAGDSDILRQ 321
M KK KKA ES+N+RL LVMKSGK +LGYKST+KS+R +AK+++IS NCPPLRKSEIEY AMLAK VHHYTG+N DLGTACGKYFRVS +SITD GDSDI+RQ
Sbjct: 1 MVSTKKQKKAQESINSRLALVMKSGKYTLGYKSTLKSLRQGKAKLIIISTNCPPLRKSEIEYYAMLAKTGVHHYTGNNIDLGTACGKYFRVSSLSITDPGDSDIIRQ 107
BLAST of mRNA_P-fluviatile_contig1.196.1 vs. uniprot
Match: A0A7S2USR9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USR9_9STRA) HSP 1 Score: 160 bits (406), Expect = 1.330e-48 Identity = 79/113 (69.91%), Postives = 97/113 (85.84%), Query Frame = 1
Query: 1 MAPGKK--SKKAIESMNARLQLVMKSGKTSLGYKSTIKSMRSTRAKMVLISNNCPPLRKSEIEYLAMLAKCTVHHYTGSNTDLGTACGKYFRVSVMSITDAGDSDILRQGAEA 333
MAP KK SKK +E+MN++LQLVMKSGK SLGYKS+IK++R+ +AK+VL+S NCPPLR+SEIEY AMLAK VHHY G+NTDLGTACGKYFRV V+ +T+AGDS+ILR E+
Sbjct: 38 MAPSKKVSSKKTVENMNSQLQLVMKSGKASLGYKSSIKALRNNKAKLVLVSKNCPPLRRSEIEYYAMLAKVGVHHYAGNNTDLGTACGKYFRVGVLCVTNAGDSEILRSIPES 150
BLAST of mRNA_P-fluviatile_contig1.196.1 vs. uniprot
Match: A0A482SS92_9ARCH (50S ribosomal protein L30e n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SS92_9ARCH) HSP 1 Score: 159 bits (403), Expect = 1.400e-48 Identity = 75/105 (71.43%), Postives = 95/105 (90.48%), Query Frame = 1
Query: 4 APGKKSKKAIESMNARLQLVMKSGKTSLGYKSTIKSMRSTRAKMVLISNNCPPLRKSEIEYLAMLAKCTVHHYTGSNTDLGTACGKYFRVSVMSITDAGDSDILR 318
A K +KK +ES+N ++QLVMKSGKT+LGYK+T+K++RS +AKMV+ISNN P LRKSE+EY AMLAKC++HHY+G+N+DLGTACGK+FRVS+MSITD GDSDILR
Sbjct: 11 AAKKATKKNVESINGKIQLVMKSGKTALGYKTTLKALRSNKAKMVVISNNTPTLRKSEVEYYAMLAKCSIHHYSGNNSDLGTACGKFFRVSMMSITDPGDSDILR 115 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.196.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig1.196.1 >prot_P-fluviatile_contig1.196.1 ID=prot_P-fluviatile_contig1.196.1|Name=mRNA_P-fluviatile_contig1.196.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=112bp MAPGKKSKKAIESMNARLQLVMKSGKTSLGYKSTIKSMRSTRAKMVLISNback to top mRNA from alignment at P-fluviatile_contig1:2516563..2518401+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig1.196.1 ID=mRNA_P-fluviatile_contig1.196.1|Name=mRNA_P-fluviatile_contig1.196.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=1839bp|location=Sequence derived from alignment at P-fluviatile_contig1:2516563..2518401+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig1:2516563..2518401+ >mRNA_P-fluviatile_contig1.196.1 ID=mRNA_P-fluviatile_contig1.196.1|Name=mRNA_P-fluviatile_contig1.196.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=672bp|location=Sequence derived from alignment at P-fluviatile_contig1:2516563..2518401+ (Porterinema fluviatile SAG_2381)back to top |