mRNA_P-fluviatile_contig1.192.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig1.192.1
Unique NamemRNA_P-fluviatile_contig1.192.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig1.192.1 vs. uniprot
Match: A0A6H5L511_9PHAE (LMWPc domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L511_9PHAE)

HSP 1 Score: 330 bits (847), Expect = 1.950e-105
Identity = 179/258 (69.38%), Postives = 198/258 (76.74%), Query Frame = 2 
Query:  248 RALAASLLLLVQSSAFVSHHV-----GSGPLLASFR-------RSSAPASRSPASDVGSRQRSTPLLPPCLMMAGGGDKTKVLFVCLGNICRSPTAEAVFKQVTSKVGVADKFVIDSCGTGGGNPNWYKEGGESYHTGDPPDARMTAAAAKRGVMLGGTSRPLQPTDLDEFDLVVGMDAANTKAISTAAEHWGKNEQAAAKLRTMTSYCRSSGDVKSVPDPYYGGPQ------GFETVLDLLDDACQGLLEKCQAGDA 967
            RAL + ++L   +S F S  V     G  PL AS R       R++A AS  P  + G R       P  L+MAG G KT+VLFVCLGNICRSPTAEAVFKQVTSK G ADKF IDSCGTGGGNP+WYKEGGESYHTGD PDARMTAAAAKRGVML G SRPL P D D+FDLVVGMD ANTKA+STAAEHWGK+++A +KLRT+TSYCRSSGDVKSVPDPYYGGPQ      GFETVLDLLDDACQGLLEKC+AG+A
Sbjct:    9 RALTSFIVLSALASRFCSAFVAPRLGGPAPLRASLRWSIPRVARAAATASIPPV-NAGKR-------PTSLVMAGEGGKTRVLFVCLGNICRSPTAEAVFKQVTSKAGDADKFEIDSCGTGGGNPSWYKEGGESYHTGDSPDARMTAAAAKRGVMLSGASRPLTPGDFDKFDLVVGMDEANTKAMSTAAEHWGKSQEAISKLRTITSYCRSSGDVKSVPDPYYGGPQVGKSAGGFETVLDLLDDACQGLLEKCRAGEA 258
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BLAST of mRNA_P-fluviatile_contig1.192.1 vs. uniprot
Match: A0A835ZBG2_9STRA (Phosphotyrosine protein phosphatase I superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBG2_9STRA)

HSP 1 Score: 241 bits (616), Expect = 5.010e-72
Identity = 115/172 (66.86%), Postives = 132/172 (76.74%), Query Frame = 2 
Query:  452 KVLFVCLGNICRSPTAEAVFKQVTSKVGVADKFVIDSCGTGGGNPNWYKEGGESYHTGDPPDARMTAAAAKRGVMLGGTSRPLQPTDLDEFDLVVGMDAANTKAISTAAEHWGKNEQAAAKLRTMTSYCRSSGDVKSVPDPYYGGPQGFETVLDLLDDACQGLLEKCQAGDA 967
            KVLFVCLGNICRSP+AEAVF+ V  K   AD FVIDSCGTGGG   WY++GG SYH GDP DARMT AAA+RGV L   SRP++P+DLDEFDL++GMD AN +A+  AA +WGK E A AKLR MTSYC       +VPDPYYGGP+GFE VLDLL+DAC+GLL    AG A
Sbjct:   34 KVLFVCLGNICRSPSAEAVFRSVVEKAEKADNFVIDSCGTGGGMRGWYRDGGRSYHEGDPADARMTEAAAQRGVHLTSISRPMRPSDLDEFDLIIGMDGANKQAVIEAAHYWGKKELAEAKLRNMTSYCTKHKSA-TVPDPYYGGPEGFEKVLDLLEDACEGLLLSIDAGTA 204
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BLAST of mRNA_P-fluviatile_contig1.192.1 vs. uniprot
Match: A0A7S2XZB6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZB6_9STRA)

HSP 1 Score: 231 bits (588), Expect = 1.550e-67
Identity = 111/180 (61.67%), Postives = 133/180 (73.89%), Query Frame = 2 
Query:  425 MMAGGGD-----KTKVLFVCLGNICRSPTAEAVFKQVTSKVGVADKFVIDSCGTGGGNPNWYKEGGESYHTGDPPDARMTAAAAKRGVMLGGTSRPLQPTDLDEFDLVVGMDAANTKAISTAAEHWGKNEQAAAKLRTMTSYCRSSGDVKSVPDPYYGGPQGFETVLDLLDDACQGLLEK 949
            M A  GD     KTKV+FVCLGNICRSPTAEAVF +     G  D+F I+SCGTGGG+ +WY + G SYH G+ PD RMTAAA+ RG+ L G SRPL P DLD FD ++ MD +N +AI+ AA +WGK+ QAA K + MTSYC+   D+KSVPDPYYGG QGFETVLD+L+DAC GLLE 
Sbjct:   47 MQASSGDRAEIGKTKVIFVCLGNICRSPTAEAVFDKKVQDAGRQDQFFIESCGTGGGSADWYMQSGFSYHEGESPDRRMTAAASNRGITLCGASRPLTPEDLDIFDYIIAMDGSNKQAITEAASYWGKSAQAAQKTKMMTSYCKKF-DMKSVPDPYYGGAQGFETVLDILEDACTGLLES 225
[Close]
BLAST of mRNA_P-fluviatile_contig1.192.1 vs. uniprot
Match: A0A2V0PHL2_9CHLO (Tyrosine phosphatase n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PHL2_9CHLO)

HSP 1 Score: 225 bits (574), Expect = 5.800e-66
Identity = 115/187 (61.50%), Postives = 127/187 (67.91%), Query Frame = 2 
Query:  431 AGGGD---KTKVLFVCLGNICRSPTAEAVFKQVTSKVGVADKFVIDSCGTGGGNPNWYKEGGESYHTGDPPDARMTAAAAKRGVMLGGTSRPLQPTDLDEFDLVVGMDAANTKAISTAAEHWGKN--------EQAAAKLRTMTSYCRSSGDVKSVPDPYYGGPQGFETVLDLLDDACQGLLEKCQA 958
            AGG +   +T VLFVCLGNICRSPTAEA+F+ V  + GVA  F IDSCGTGGG   WYK GG SYH GDP D RMTAAAA RGV L   SRPL P D   F  +VGMD AN +AI TAA+ W  N        E+A  ++  MTSYC  +  V  VPDPYYGGPQGFETVLDLLDDAC GLL   QA
Sbjct:    7 AGGAEQAGRTGVLFVCLGNICRSPTAEAMFRAVVEREGVAGAFDIDSCGTGGGASGWYKPGGFSYHEGDPADPRMTAAAAGRGVRLTSRSRPLAPADFGRFKYIVGMDGANVRAILTAADFWAANGSADVPPAEEARGQVSLMTSYCTETEGVTEVPDPYYGGPQGFETVLDLLDDACTGLLRHIQA 193
[Close]
BLAST of mRNA_P-fluviatile_contig1.192.1 vs. uniprot
Match: A0A061R5H5_9CHLO (Protein-tyrosine phosphatase n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R5H5_9CHLO)

HSP 1 Score: 226 bits (576), Expect = 2.410e-65
Identity = 106/174 (60.92%), Postives = 124/174 (71.26%), Query Frame = 2 
Query:  446 KTKVLFVCLGNICRSPTAEAVFKQVTSKVGVADKFVIDSCGTGGGNPNWYKEGGESYHTGDPPDARMTAAAAKRGVMLGGTSRPLQPTDLDEFDLVVGMDAANTKAISTAAEHWGKN-----EQAAAKLRTMTSYCRSSGDVKSVPDPYYGGPQGFETVLDLLDDACQGLLEKC 952
            KT VLFVCLGNICRSPTAEAV   V  + G+  +FV+DSCGTGGGNPNWYKEGG SYH G+  D RMT  AA+RGV L   SRPL+P DL+ FD ++GMD++N  +I  AA++W        +    KL+TMTSYCR       VPDPYYGG QGFE VLDLLDDAC GLL+ C
Sbjct:   83 KTSVLFVCLGNICRSPTAEAVLTAVVKEAGLESRFVVDSCGTGGGNPNWYKEGGWSYHEGEDADPRMTEVAARRGVHLTSKSRPLKPDDLNRFDYIIGMDSSNMASIQVAADYWASKGYDIPKNYRGKLKTMTSYCRKHKGETEVPDPYYGGTQGFERVLDLLDDACSGLLQDC 256
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BLAST of mRNA_P-fluviatile_contig1.192.1 vs. uniprot
Match: A0A2P6VF53_9CHLO (Tyrosine phosphatase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VF53_9CHLO)

HSP 1 Score: 222 bits (565), Expect = 9.410e-65
Identity = 117/186 (62.90%), Postives = 131/186 (70.43%), Query Frame = 2 
Query:  428 MAG-GGDKTKVLFVCLGNICRSPTAEAVFKQVTSKVGVADKFVIDSCGTGGGNPNWYKEGGESYHTGDPPDARMTAAAAKRGVMLGGTSRPLQPTDLDEFDLVVGMDAANTKAISTAAEHW-GKNEQAA------AKLRTMTSYCRSSGDVK--SVPDPYYGGPQGFETVLDLLDDACQGLLEKCQ 955
            MAG  G+KTKVLFVCLGNICRSP+AEAVFK V  K GV+ +F IDSCGTGGG+ NWY  GG SYH GDP D RMTA A  RGV L   SRPL+P+DL+EFD +VGMDAAN  AI  AAEHW G     A      +KL  MT + RS    K   VPDPYYGG +GF+ VLDLLDDAC+GLL   Q
Sbjct:    1 MAGDNGEKTKVLFVCLGNICRSPSAEAVFKDVVEKAGVSGQFEIDSCGTGGGSSNWYLPGGFSYHEGDPADGRMTATARTRGVTLTSRSRPLRPSDLEEFDYIVGMDAANLAAIRRAAEHWRGAGGGGAVPPDYGSKLSLMTDFLRSQQFAKFNEVPDPYYGGQKGFDLVLDLLDDACKGLLATIQ 186
[Close]
BLAST of mRNA_P-fluviatile_contig1.192.1 vs. uniprot
Match: A0A835WI06_9CHLO (LMWPc domain-containing protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835WI06_9CHLO)

HSP 1 Score: 220 bits (561), Expect = 7.360e-64
Identity = 108/173 (62.43%), Postives = 120/173 (69.36%), Query Frame = 2 
Query:  455 VLFVCLGNICRSPTAEAVFKQVTSKVGVADKFVIDSCGTGGGNPNWYKEGGESYHTGDPPDARMTAAAAKRGVMLGGTSRPLQPTDLDEFDLVVGMDAANTKAISTAAEHWGKNEQAAAK--------LRTMTSYCRSSGDVKSVPDPYYGGPQGFETVLDLLDDACQGLLEK 949
            VLFVCLGNICRSPTAEAVFK V  + G+AD F IDSCGTGGGNP+W+ EGG SYH GDP D+RMT  A KRGV+L   SRPL P D   FD +VGMDA N +AI TAA++W      A K        L  MTSYC        VPDPYYGGP GFE VLDLLDDAC+GLL +
Sbjct:   35 VLFVCLGNICRSPTAEAVFKAVVQRAGLADAFDIDSCGTGGGNPDWFTEGGWSYHEGDPADSRMTLTARKRGVLLTSRSRPLAPLDFSRFDYIVGMDAKNIRAIRTAADYWRVRPMGADKVPEAYGQRLSLMTSYCTKFKGEPEVPDPYYGGPAGFERVLDLLDDACEGLLTQ 207
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BLAST of mRNA_P-fluviatile_contig1.192.1 vs. uniprot
Match: A0A8J4GHR6_9CHLO (LMWPc domain-containing protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4GHR6_9CHLO)

HSP 1 Score: 218 bits (555), Expect = 2.360e-62
Identity = 107/179 (59.78%), Postives = 120/179 (67.04%), Query Frame = 2 
Query:  437 GGDKTKVLFVCLGNICRSPTAEAVFKQVTSKVGVADKFVIDSCGTGGGNPNWYKEGGESYHTGDPPDARMTAAAAKRGVMLGGTSRPLQPTDLDEFDLVVGMDAANTKAISTAAEHWGKNEQAAAKLRT--------MTSYCRSSGDVKSVPDPYYGGPQGFETVLDLLDDACQGLLEK 949
            G  K  VLFVCLGNICRSPTAEAVF+ V  K G+   F IDSCGTGGGNP+W+ EGG SYH GDP D+RMT  A KRGV+L   SRPLQP DL  FD +VGMD  N +AI TAA++W        K+          MTSYCR       VPDPYYGG  GFE VLDLL+DAC+GLLE 
Sbjct:   75 GNRKAGVLFVCLGNICRSPTAEAVFRSVVEKAGLTAAFDIDSCGTGGGNPDWFTEGGWSYHEGDPADSRMTMTARKRGVLLTSRSRPLQPLDLSRFDYIVGMDPKNLRAIKTAADYWLVRPMGEGKVPPDYSRRVVLMTSYCRKFTGAPEVPDPYYGGAAGFERVLDLLEDACEGLLES 253
[Close]
BLAST of mRNA_P-fluviatile_contig1.192.1 vs. uniprot
Match: A0A835VZ39_CHLIN (LMWPc domain-containing protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835VZ39_CHLIN)

HSP 1 Score: 214 bits (545), Expect = 1.440e-61
Identity = 105/176 (59.66%), Postives = 120/176 (68.18%), Query Frame = 2 
Query:  446 KTKVLFVCLGNICRSPTAEAVFKQVTSKVGVADKFVIDSCGTGGGNPNWYKEGGESYHTGDPPDARMTAAAAKRGVMLGGTSRPLQPTDLDEFDLVVGMDAANTKAISTAAEHWGKNEQAA--------AKLRTMTSYCRSSGDVKSVPDPYYGGPQGFETVLDLLDDACQGLLEK 949
            K  VLFVCLGNICRSPTAEAVFK V  + G+A+ F IDSCGTGGGNP+W+ EGG SYH GD  D+RMT  A KRGV+L   SRPL P D   FD +VGMDA N +AI TAA++W      A         +L  MT+YC        VPDPYYGGP GFE VLDLLDDAC+GLL +
Sbjct:   30 KIGVLFVCLGNICRSPTAEAVFKAVVQRAGLAEAFDIDSCGTGGGNPDWFTEGGWSYHEGDAADSRMTLTARKRGVLLTSRSRPLAPLDFGRFDYIVGMDAKNIRAIRTAADYWRVRPMGADTVPQSYGERLSLMTAYCSKFKGEPEVPDPYYGGPAGFERVLDLLDDACEGLLAQ 205
[Close]
BLAST of mRNA_P-fluviatile_contig1.192.1 vs. uniprot
Match: A0A2K3CYU2_CHLRE (LMWPc domain-containing protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3CYU2_CHLRE)

HSP 1 Score: 216 bits (551), Expect = 1.610e-61
Identity = 106/174 (60.92%), Postives = 120/174 (68.97%), Query Frame = 2 
Query:  446 KTKVLFVCLGNICRSPTAEAVFKQVTSKVGVADKFVIDSCGTGGGNPNWYKEGGESYHTGDPPDARMTAAAAKRGVMLGGTSRPLQPTDLDEFDLVVGMDAANTKAISTAAEHWGKNEQA--------AAKLRTMTSYCRSSGDVKSVPDPYYGGPQGFETVLDLLDDACQGLL 943
            K  VLFVCLGNICRSPTAEAVF+ V  + G+A+ F IDSCGTGGGNP+W+ EGG SYH GDP D+RMT  A KRGV L   SRPL P D   FD +VGMDA N +AI TAA++W              AA+L  MT+YC        VPDPYYGGP GFE VLDLLDDAC+GLL
Sbjct:   97 KIGVLFVCLGNICRSPTAEAVFRTVVQRAGLAEAFDIDSCGTGGGNPDWFTEGGWSYHEGDPADSRMTLTARKRGVQLTSRSRPLAPLDFGRFDYIVGMDAKNIRAIRTAADYWRVRPMGGDAVPADYAARLSLMTAYCSRFKGEPEVPDPYYGGPAGFERVLDLLDDACEGLL 270
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.192.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L511_9PHAE1.950e-10569.38LMWPc domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A835ZBG2_9STRA5.010e-7266.86Phosphotyrosine protein phosphatase I superfamily ... [more]
A0A7S2XZB6_9STRA1.550e-6761.67Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A2V0PHL2_9CHLO5.800e-6661.50Tyrosine phosphatase n=1 Tax=Raphidocelis subcapit... [more]
A0A061R5H5_9CHLO2.410e-6560.92Protein-tyrosine phosphatase n=1 Tax=Tetraselmis s... [more]
A0A2P6VF53_9CHLO9.410e-6562.90Tyrosine phosphatase n=1 Tax=Micractinium conductr... [more]
A0A835WI06_9CHLO7.360e-6462.43LMWPc domain-containing protein n=1 Tax=Chlamydomo... [more]
A0A8J4GHR6_9CHLO2.360e-6259.78LMWPc domain-containing protein n=1 Tax=Volvox ret... [more]
A0A835VZ39_CHLIN1.440e-6159.66LMWPc domain-containing protein n=1 Tax=Chlamydomo... [more]
A0A2K3CYU2_CHLRE1.610e-6160.92LMWPc domain-containing protein n=1 Tax=Chlamydomo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:2452533..2457729 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score346.7
Seed ortholog evalue1e-92
Seed eggNOG ortholog2880.D8LN75
Preferred namestp1
KEGG rclassRC00017
KEGG koko:K01104,ko:K14394
KEGG ReactionR00548,R02135
KEGG Pathwayko00730,ko00740,ko01100,map00730,map00740,map01100
GOsGO:0003674,GO:0003824,GO:0003993,GO:0004721,GO:0004725,GO:0004726,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019538,GO:0023052,GO:0035335,GO:0036211,GO:0042578,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0071704,GO:0140096,GO:1901564
EggNOG free text desc.non-membrane spanning protein tyrosine phosphatase activity
EggNOG OGsCOG0394@1,KOG3217@2759
EC3.1.3.2,3.1.3.48
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01009
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionProtein tyrosine phosphatase
Ec32 orthologEc-05_003800.1
Exons6
Model size2104
Cds size837
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.192.1prot_P-fluviatile_contig1.192.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig1 2452666..2456595 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815302.3656704-UTR-P-fluviatile_contig1:2452532..24526651622815302.3656704-UTR-P-fluviatile_contig1:2452532..2452665Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 2452533..2452665 +
1693561448.3335054-UTR-P-fluviatile_contig1:2452532..24526651693561448.3335054-UTR-P-fluviatile_contig1:2452532..2452665Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 2452533..2452665 +
1622815302.442232-UTR-P-fluviatile_contig1:2456595..24577291622815302.442232-UTR-P-fluviatile_contig1:2456595..2457729Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 2456596..2457729 +
1693561448.410308-UTR-P-fluviatile_contig1:2456595..24577291693561448.410308-UTR-P-fluviatile_contig1:2456595..2457729Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 2456596..2457729 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815302.3778222-CDS-P-fluviatile_contig1:2452665..24528431622815302.3778222-CDS-P-fluviatile_contig1:2452665..2452843Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2452666..2452843 +
1693561448.3517332-CDS-P-fluviatile_contig1:2452665..24528431693561448.3517332-CDS-P-fluviatile_contig1:2452665..2452843Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2452666..2452843 +
1622815302.3868878-CDS-P-fluviatile_contig1:2453580..24538601622815302.3868878-CDS-P-fluviatile_contig1:2453580..2453860Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2453581..2453860 +
1693561448.3606195-CDS-P-fluviatile_contig1:2453580..24538601693561448.3606195-CDS-P-fluviatile_contig1:2453580..2453860Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2453581..2453860 +
1622815302.3967412-CDS-P-fluviatile_contig1:2454438..24544961622815302.3967412-CDS-P-fluviatile_contig1:2454438..2454496Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2454439..2454496 +
1693561448.3696537-CDS-P-fluviatile_contig1:2454438..24544961693561448.3696537-CDS-P-fluviatile_contig1:2454438..2454496Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2454439..2454496 +
1622815302.4099097-CDS-P-fluviatile_contig1:2454675..24547681622815302.4099097-CDS-P-fluviatile_contig1:2454675..2454768Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2454676..2454768 +
1693561448.3781137-CDS-P-fluviatile_contig1:2454675..24547681693561448.3781137-CDS-P-fluviatile_contig1:2454675..2454768Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2454676..2454768 +
1622815302.422344-CDS-P-fluviatile_contig1:2455442..24555921622815302.422344-CDS-P-fluviatile_contig1:2455442..2455592Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2455443..2455592 +
1693561448.3936822-CDS-P-fluviatile_contig1:2455442..24555921693561448.3936822-CDS-P-fluviatile_contig1:2455442..2455592Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2455443..2455592 +
1622815302.432558-CDS-P-fluviatile_contig1:2456517..24565951622815302.432558-CDS-P-fluviatile_contig1:2456517..2456595Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2456518..2456595 +
1693561448.4021757-CDS-P-fluviatile_contig1:2456517..24565951693561448.4021757-CDS-P-fluviatile_contig1:2456517..2456595Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2456518..2456595 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig1.192.1

>prot_P-fluviatile_contig1.192.1 ID=prot_P-fluviatile_contig1.192.1|Name=mRNA_P-fluviatile_contig1.192.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=279bp
MITIITYSTPLGGVLCHDPPCLCSHRSVSPMVRPAAACRALAASLLLLVQ
SSAFVSHHVGSGPLLASFRRSSAPASRSPASDVGSRQRSTPLLPPCLMMA
GGGDKTKVLFVCLGNICRSPTAEAVFKQVTSKVGVADKFVIDSCGTGGGN
PNWYKEGGESYHTGDPPDARMTAAAAKRGVMLGGTSRPLQPTDLDEFDLV
VGMDAANTKAISTAAEHWGKNEQAAAKLRTMTSYCRSSGDVKSVPDPYYG
GPQGFETVLDLLDDACQGLLEKCQAGDA*
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mRNA from alignment at P-fluviatile_contig1:2452533..2457729+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig1.192.1 ID=mRNA_P-fluviatile_contig1.192.1|Name=mRNA_P-fluviatile_contig1.192.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5197bp|location=Sequence derived from alignment at P-fluviatile_contig1:2452533..2457729+ (Porterinema fluviatile SAG_2381)
GAGTTATTCAAAAAAGTGGTTCTGTAGAGTGGGGTTCAGGAGGCGTTTCT
TACAGGCGCCATGCTCTCGTTCGTCTGTACACAGGTGCAAATTTCAAATT
TTCCGGGCGCTTGATGGGGGCAAATACCTAGACATGATAACCATTATTAC
TTATAGTACACCGTTGGGTGGGGTTCTCTGTCACGACCCCCCGTGTTTGT
GCTCCCATCGCAGTGTATCGCCAATGGTCCGACCAGCCGCAGCGTGCAGG
GCGCTGGCAGCATCACTTCTACTTCTCGTGCAATCGTCCGCCTTCGTTAG
TCATCACGTTGGTAAGAGTAAGAAGGCTTTGCTTCCGAATTCCGGACACA
AACGGCGGTGTTTGTGTACACACGTGATTCATGCTTGAAGTAGGCGGTCC
TGCTAAACGACAGCCGTGCTGGGCGAAGCACTCAAGCACTTTGGCTATAC
CAAAGTGCATTCGCAGGACTTTCCTGCTGCGCCTTTTTGTGCGATGTGTT
TGGATAGTTGCATAGTTGTCAAGACAAATTAACGAGAACGTGTGTTGTCG
TTTCTGAACTCGGCGGCCGGGACTGTCAACATTTTCCTTGAACAGAAATC
TGCCACTGCCCTTCCCGAAAGTGTCCCTCACTCCTTTTCAATATTTTTTC
CAAGAGTACACGCATCCATTTTTTTCTCTTAGCCTTATGATGTGGACCGA
AAAGGCACATCAAGAGTTACACACTGCAGATTCATGAGACGAGGAAAGCA
CGTGGCGAAAAACTACGGAGATCCGAAGGTCGCATGTCTCACTTCGAACA
TTAGCTCCAGGTTTAATTCCATTACCGAATCAAAATAACTCCGGAGTTTT
GACCAAGGGCAGATGAAGGGAGAGTCAACAGCGATATCGGAACAGCGAAG
CTTCTCCAAAGTTTTCGTTGATCAAGGTGGCCGTCCAATTTCTCCCGGGT
TCATCCAAGGAGTAGATCATGCGGGACGAATGGGCGGGAGGGGAACGTAT
TTGACCTGGAACAATAGGGTGGTGAACTTTGTGTGTTGCCGGCGACAGGA
TCGGGGCCGCTCCTAGCCTCTTTTCGCCGCAGCAGTGCGCCGGCATCAAG
ATCTCCCGCCTCGGACGTTGGCTCGAGGCAAAGATCGACACCACTCCTTC
CGCCGTGTTTGATGATGGCGGGAGGTGGCGACAAGACGAAGGTGCTCTTC
GTGTGCCTCGGCAACATCTGCAGGAGCCCGACGGCGGAGGCCGTATTCAA
GCAGGTGACGTCGAAGGTAGGAGTCGCCGACAAGTTCGTCATCGACTCAT
GCGGGACTGGAGGAGGAAACCCGAACTGGTGAGCGTTTTCCGCTTTGTTG
GGGTAGGAAGGGACAACAGACACAGGGACAGCGAGGCGGGGACAGGGTCG
GGCCGGGTCGATACGAAACGCGAGTGTTCGTTGCTAGGCTCGCGCGGTAG
ATGGGGACAGACCAACTGGAAAGGAACTCTCATTCGTTTTTCAGTGCTTT
CGTAAAGATGTAGGCCGTCAACAATGCGTCCCCATCCCGACGCGATGCCG
TTCTCATTTGCGAACCAGTCTCTGCCACGGTATTTGTATGTGCACGAAGT
GTATGTTGAGCTCGTGACCCACGGCCGTCCCTTTGTACCCTTGACATTAT
ATTTCGGGATAGACGTTTGCCGGCCTCGAAGCGCGTCGATGCTTCACATT
GCACGAGAAAAAATGCGTTGCCGTGATGTGAGGTGGGGGAAAATGTGACC
AAATCCCAAGAGTTATTTCCCAAGAGTTAATTCACTGTGCAGCTGCCTGC
GGAGTGGTAAGCGCCGGTACGACATCCGCCGGATCTCATTTGTTTGGTCT
GCTCGTCGGTCACCGTTCCCCACCCCCTTCACCTAAATCTTGGCGTGATG
CTCAAGGTACAAGGAAGGTGGAGAGAGCTACCACACCGGTGATCCTCCGG
ACGCTCGCATGACGGTACGTCGGATTGACAGGGACATACTCGATCAGACA
ATGGTTTGCTCCGCTCGTTCCTTTTTTCCATGGTTGTAGACACGGGCTGC
CCTGCCCATTTCAGCATGAACCACCTGAGCTTCGCCATTTGGATAAGCTC
AGGCTTTCCGTTTGTCCCGTGCTTGCTTCCTTCCGCACTTCAGGCCGCCG
CCGCCAAAAGGGGCGTCATGTTGGGTGGAACTTCGCGCCCCCTGCAACCC
ACCGACCTCGACGAGTTCGATCTTGTGGTCGGCATGGTAAGATGTCCCAT
TGGCCGGAAAAACCACGGGACATATGATCCACAAGTAGCAAAAGTACCGT
GAGGGGCGGCGAAACGGTATTTCATGCACATCGGCAGCAAACTCAATTGT
TCTCACCCTCAAATACAGCAGTGCCATTGGTAAGCAATGTTGTGATGAAT
GACCTGTTTAAGGTGTCGGAGAAAGACCCCGGGGCGCGATGAAAGGCCAG
ATACAGCTCTTTTGAAAATTTCGATGGAAGTATCGAGTATTGCTTCAGGT
TCGAAAGTATGGTTGCAATATCCTGGAGAAAGAGCGTCCCAAATCCCCTA
ACGACCGGACGAGAATGGGAGGTTGTGGCGTTGTGAGGCTCCAGTGCCGG
GCGTTTGGATTGAGAGATGCTTGTGGGTACAAGAGAAGGCCATGGACATA
AGCAAGGCGCACAATTGAATATGGCGTGTGCTGCGGCAACTTGGCCCTTC
CTTGCCCATTGTTGGTGCCCGTCGCCAGGGGAGCCCACAGGGGTTGTGTG
GTTGGGCTTTTTGCACGGCAGAAGGAGAACGTGCGGTCAAGCGCGACAAT
AAGTACACTTGCATCCTCACCGACCCTAAGACAAGTCTCCCTGTCCAACT
ATCTCTCCGCCCTCTTCCGCACGTCCGCCGGCCGTTTGCCCGGCCGTTTC
GCCACGAAAGGATGCGGCGAATACGAAGGCAATTTCCACCGCGGCGGAGC
ATTGGGGCAAGAACGAACAGGCTGCCGCTAAGCTGCGGACCATGACCTCG
TATTGTCGCTCGAGCGGAGACGTCAAGAGCGTTCCTGACCCATACTACGG
CGGGCCTCAGGTTTGGTTTTTAGTTAGGATATGCTGAGAAGCACACACAC
CTCGGGCACTGATGTGGGCATTTCCAAAAAACACATATTTTTGTCAACTG
TTTTAAGACTTAAATTCACAGAATATCGTCCGGTGACATGCTTCCAAGAA
TCGAAGCCTCCGCGCCACCCCCTGTCATTCCGGAGAAGACACGAACGTGT
GCACTTTGGAGCAATTGCACGCTGGCCACGAGGTTGGTTATCATTCAGGC
GGTGCTTCGCGCGTGGTTGTGGTGGGTGTCCCTAGAGCATGTTCAATGTG
GGAGCCGGACCTTCGCGTCGATCTATCGTTTCGAGTTGTGTCCTTTCGTT
GCGATCTCGGGTTTCGGTTATCGCCGAGCCGACCGCGGTCGTGCGTCGAC
TATTTACGAGTTTAATAGTCTGCTACAAGCACTGTGTTTGTTCAGATCCT
GGCTCATGACGAGTCGGTCTGCAAGGCTGCTCAGCAACGTTTTGGTGAAC
AGGATATTTTTCAGTCGCGATCATCGGATGCAGCACTCCCTGACAAAGGT
AGTTTACTGCTGCACCGTTCAATCCCTGGACGTGAGACGGGTATGGTGCC
GGGGAGGGTTATCTCGCATGGGGATGGAGGTAGCTATCGAGCAGGACAAC
AGGTGTCTCGTATTCTCTGCGCGATGACCTCCGTGTTACCAGTTCCGGCT
TCGGCGTTCAGCCATCACGTTGATGGATGGTCATCGACTCGTCCTGATCT
TGAAGATTCTCGTATTGGATTTGAATCAACTCCGCAATCGTTTCCTCATC
AAAAAGCTCCACACGTCACATTTTTTCCTCCTCCTCCAAAAGGGCGGAAT
CCAGAAGAAGTTTTCCTCTCGCAGTTTCCACAAACGGCGCGCGCGTCCTG
CCGTCGTTTTAACATGCACGTGTTTTGAACTCTAGGGCTTTGAGACGGTG
CTGGACTTATTGGACGACGCGTGCCAAGGGTTGCTCGAGAAGTGCCAGGC
TGGGGATGCTTAAATGGCTGGCTGCATGCACCTTGAAATCATTTCCTCCT
ACTCCGTAAGGAGGGAAAGGGAGCTCGGGCTACGCGTGGTTACCACCCAC
CACTTGAGGCGCTTTATTCTCTTTTGTACATGTGACGGGGAAGGTGAAGC
TGCACGAGGTTGGCTTTAATCGAACGAAGTTCGAGAGTGAGAGCCACTTT
TTCGGGCCATACTTTCAATTCCACGAGGCCCTCCATATTCTGTATGTTTA
CGAACATGTTCCATATGACATGTCCTGGCCTACACACGTGGGCATCGCCT
ACTTGTACAGGGTAGCAAGAAGACTGCTTTCACGCCCTGAATATTGAATT
GTGTTTTTTTCCCGCGGAAGTTGCGATGGACTGTGGATCCAAAGCTAATA
GTTTGCAATGGTTAACTGCTCAAGGAGCACGGGGTGCTCTAGCACCATTG
GTGACCCCAAGATCAGTCAGGCATTGCTCGGGTGGCATCTTATTTTTGAA
GCGGGCCGGACTCGCAGTCATAGATGATCATCTATTTGTCGCTTTACTCT
TGTCGGACGGATTGCGGCATGAAACAGTGGCCGAACCCCTGTATTGGTTA
TCAACGCCTGTGTGTGGACATCGGATCTGGCACAAGTGAGCCTATTAAGT
CGTCGAAGAGAAGCAACTCTAGTCGGAAGTTGGAGTGACCTTGCGTCGTG
GCTCCGGGAAGGAAGAAAATGAAGTGCCCAACGTAACTAGCCTTCCAAAG
TGCTGCAGCAATATTTTGAAGGCGAATTGGAGTGATGTAGTTGAACAGAA
ACTATACGAAATCCGGGCGGTACTTGGTACCAGTTGCGGTCAGGACGAAT
TCGTTCGCATGTAGGCGGCGTGATCTCGGGAGTGAAGACGTGACGACGGG
ACGTGACAGACCAGTTTTACGTGGTCAAAGCACGGACAGGGGTGAAAGGG
CTGGGCCTGACGCGCGTGGACGGCGGACAGCACTCGGTCGTCATTTTGTG
CCCATGAAAAGACTTTGACGGAGAGGCTGCGCAGAGCACAGGGCATCTCA
GCAGCCAAGATTGGCCCACCGTTAGCGGGTGGGAAACAACAAACGCAATT
AAAATATGCGAAACCAAGCTGAGGGGTCCATGGGCCTCCGCAAGCAC
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Coding sequence (CDS) from alignment at P-fluviatile_contig1:2452533..2457729+

>mRNA_P-fluviatile_contig1.192.1 ID=mRNA_P-fluviatile_contig1.192.1|Name=mRNA_P-fluviatile_contig1.192.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1674bp|location=Sequence derived from alignment at P-fluviatile_contig1:2452533..2457729+ (Porterinema fluviatile SAG_2381)
ATGATAACCATTATTACTTATAGTACACCGTTGGGTGGGGTTCTCTGTCA
CGACCCCCCGTGTTTGTGCTCCCATCGCAGTGTATCGCCAATGGTCCGAC
CAGCCGCAGCGTGCAGGGCGCTGGCAGCATCACTTCTACTTCTCGTGCAA
TCGTCCGCCTTCGTTAGTCATCACGTTGATGATAACCATTATTACTTATA
GTACACCGTTGGGTGGGGTTCTCTGTCACGACCCCCCGTGTTTGTGCTCC
CATCGCAGTGTATCGCCAATGGTCCGACCAGCCGCAGCGTGCAGGGCGCT
GGCAGCATCACTTCTACTTCTCGTGCAATCGTCCGCCTTCGTTAGTCATC
ACGTTGGATCGGGGCCGCTCCTAGCCTCTTTTCGCCGCAGCAGTGCGCCG
GCATCAAGATCTCCCGCCTCGGACGTTGGCTCGAGGCAAAGATCGACACC
ACTCCTTCCGCCGTGTTTGATGATGGCGGGAGGTGGCGACAAGACGAAGG
TGCTCTTCGTGTGCCTCGGCAACATCTGCAGGAGCCCGACGGCGGAGGCC
GTATTCAAGCAGGTGACGTCGAAGGTAGGAGTCGCCGACAAGTTCGTCAT
CGACTCATGCGGGACTGGAGGAGGAAACCCGAACTGGATCGGGGCCGCTC
CTAGCCTCTTTTCGCCGCAGCAGTGCGCCGGCATCAAGATCTCCCGCCTC
GGACGTTGGCTCGAGGCAAAGATCGACACCACTCCTTCCGCCGTGTTTGA
TGATGGCGGGAGGTGGCGACAAGACGAAGGTGCTCTTCGTGTGCCTCGGC
AACATCTGCAGGAGCCCGACGGCGGAGGCCGTATTCAAGCAGGTGACGTC
GAAGGTAGGAGTCGCCGACAAGTTCGTCATCGACTCATGCGGGACTGGAG
GAGGAAACCCGAACTGGTACAAGGAAGGTGGAGAGAGCTACCACACCGGT
GATCCTCCGGACGCTCGCATGACGGTACAAGGAAGGTGGAGAGAGCTACC
ACACCGGTGATCCTCCGGACGCTCGCATGACGGCCGCCGCCGCCAAAAGG
GGCGTCATGTTGGGTGGAACTTCGCGCCCCCTGCAACCCACCGACCTCGA
CGAGTTCGATCTTGTGGTCGGCATGGCCGCCGCCGCCAAAAGGGGCGTCA
TGTTGGGTGGAACTTCGCGCCCCCTGCAACCCACCGACCTCGACGAGTTC
GATCTTGTGGTCGGCATGGATGCGGCGAATACGAAGGCAATTTCCACCGC
GGCGGAGCATTGGGGCAAGAACGAACAGGCTGCCGCTAAGCTGCGGACCA
TGACCTCGTATTGTCGCTCGAGCGGAGACGTCAAGAGCGTTCCTGACCCA
TACTACGGCGGGCCTCAGGATGCGGCGAATACGAAGGCAATTTCCACCGC
GGCGGAGCATTGGGGCAAGAACGAACAGGCTGCCGCTAAGCTGCGGACCA
TGACCTCGTATTGTCGCTCGAGCGGAGACGTCAAGAGCGTTCCTGACCCA
TACTACGGCGGGCCTCAGGGCTTTGAGACGGTGCTGGACTTATTGGACGA
CGCGTGCCAAGGGTTGCTCGAGAAGTGCCAGGCTGGGGATGCTTAAGGCT
TTGAGACGGTGCTGGACTTATTGGACGACGCGTGCCAAGGGTTGCTCGAG
AAGTGCCAGGCTGGGGATGCTTAA
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