mRNA_P-fluviatile_contig1.190.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig1.190.1
Unique NamemRNA_P-fluviatile_contig1.190.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig1.190.1 vs. uniprot
Match: A0A6H5JN04_9PHAE ([Acyl-carrier-protein] S-malonyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JN04_9PHAE)

HSP 1 Score: 577 bits (1487), Expect = 3.620e-197
Identity = 294/327 (89.91%), Postives = 313/327 (95.72%), Query Frame = 2
Query:    2 RGMSSRGSGLRMSDTDFAEYDSKVTFMFPGQGAQYVGMAADICDEVPKAKELFDKASEILGYDLLEKCKTGPKGVLDSTEVSQPAIFVCSMAAVEKLRLEEGDAAVNEATCALGLSLGEYSALCFAGALSFEDGVKVTKARWGEAMQAASDATDGSMVSVIGLSSDKVQEICDAAAEQSGEPVQIANFLCSGNYAVSGSSKACDVVEQIAKPDFKARMTVRLAVAGAFHTDFMEAAVDKLGTVLDSIEVKKPRIPVVSNVDAEPHSDPDVIKDILKKQVTNPVQFEQSLGNVMAKGYEYGYECGPGKVVAGILKRVDKKAKITNIQV 982
            RG+S R SG+RMSDTDFAEY+SKVTFMFPGQGAQY+GMAA ICDEVPKAKELF+KAS ILGYDLL+KCK GPK VLDSTEVSQPAIFVCSMAAVEKLRL+EGD A++ ATCA+GLSLGEYSALCFAGALSFEDGV+VTKAR GEAMQAASDATDGSMVSVIGL SDKVQEICDAAA++SGEPVQ+ANFLC+GNYAVSGSSKACDVVEQIAKPDFKARMTVRLAVAGAFHTDFMEAAVDKLG VLDSIEVKKPRIPVVSNVDAEPHSDP VIKDILKKQVTNPVQFEQSL NVM KG+EYGYECGPGKVVAGILKRVD+KAK+TNI+V
Sbjct:   44 RGVSGRRSGMRMSDTDFAEYNSKVTFMFPGQGAQYMGMAAGICDEVPKAKELFEKASTILGYDLLDKCKNGPKNVLDSTEVSQPAIFVCSMAAVEKLRLDEGDEALDAATCAMGLSLGEYSALCFAGALSFEDGVRVTKAR-GEAMQAASDATDGSMVSVIGLKSDKVQEICDAAAKESGEPVQVANFLCNGNYAVSGSSKACDVVEQIAKPDFKARMTVRLAVAGAFHTDFMEAAVDKLGAVLDSIEVKKPRIPVVSNVDAEPHSDPAVIKDILKKQVTNPVQFEQSLANVMGKGFEYGYECGPGKVVAGILKRVDRKAKMTNIEV 369          
BLAST of mRNA_P-fluviatile_contig1.190.1 vs. uniprot
Match: A0A835ZIZ1_9STRA ([Acyl-carrier-protein] S-malonyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIZ1_9STRA)

HSP 1 Score: 501 bits (1290), Expect = 2.200e-168
Identity = 252/316 (79.75%), Postives = 287/316 (90.82%), Query Frame = 2
Query:   35 MSDTDFAEYDSKVTFMFPGQGAQYVGMAADICDEVPKAKELFDKASEILGYDLLEKCKTGPKGVLDSTEVSQPAIFVCSMAAVEKLRLEEGDAAVNEATCALGLSLGEYSALCFAGALSFEDGVKVTKARWGEAMQAASDATDGSMVSVIGLSSDKVQEICDAAAEQSGEPVQIANFLCSGNYAVSGSSKACDVVEQIAKPDFKARMTVRLAVAGAFHTDFMEAAVDKLGTVLDSIEVKKPRIPVVSNVDAEPHSDPDVIKDILKKQVTNPVQFEQSLGNVMAKGYEYGYECGPGKVVAGILKRVDKKAKITNIQV 982
            MSD +F +Y SKV+FMFPGQGAQYVGMAA ICDEVP AK++F+ A EILGYDLLE+C  GPK VLDSTEVSQPAIFVCSMAAVEKLR E+GDAAV+EATCA+GLSLGEYSALCFAGALSFEDGV+VTKAR GEAMQ ASDATDG+MVSVIGL S  V+++C AAAE+SG+PV +ANFLC+GNYAVSG+S ACDVVEQIAKPDFKARMTVRLAVAGAFHT+FM  AVDKLGTVLDSIE+ KPRIPV+SNVDA+PHSDP VIK++LKKQVTNPV +E ++  V+ +GYE GYECGPGKVVAGILKRVD+KA+ITN++V
Sbjct:    1 MSDGEFDDYTSKVSFMFPGQGAQYVGMAASICDEVPAAKKMFETAKEILGYDLLERCTNGPKEVLDSTEVSQPAIFVCSMAAVEKLRQEKGDAAVDEATCAMGLSLGEYSALCFAGALSFEDGVRVTKAR-GEAMQLASDATDGAMVSVIGLDSATVKDLCAAAAEKSGKPVAVANFLCNGNYAVSGASAACDVVEQIAKPDFKARMTVRLAVAGAFHTEFMSTAVDKLGTVLDSIEIGKPRIPVISNVDAKPHSDPKVIKELLKKQVTNPVLWENTMAEVLKRGYERGYECGPGKVVAGILKRVDRKAEITNVEV 315          
BLAST of mRNA_P-fluviatile_contig1.190.1 vs. uniprot
Match: A0A7S2PIE1_9STRA ([Acyl-carrier-protein] S-malonyltransferase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PIE1_9STRA)

HSP 1 Score: 448 bits (1152), Expect = 3.770e-147
Identity = 225/315 (71.43%), Postives = 268/315 (85.08%), Query Frame = 2
Query:   38 SDTDFAEYDSKVTFMFPGQGAQYVGMAADICDEVPKAKELFDKASEILGYDLLEKCKTGPKGVLDSTEVSQPAIFVCSMAAVEKLRLEEGDAAVNEATCALGLSLGEYSALCFAGALSFEDGVKVTKARWGEAMQAASDATDGSMVSVIGLSSDKVQEICDAAAEQSGEPVQIANFLCSGNYAVSGSSKACDVVEQIAKPDFKARMTVRLAVAGAFHTDFMEAAVDKLGTVLDSIEVKKPRIPVVSNVDAEPHSDPDVIKDILKKQVTNPVQFEQSLGNVMAKGYEYGYECGPGKVVAGILKRVDKKAKITNIQV 982
            SDTDF ++ SKV+FMFPGQGAQ+VGM +++ + VP AK LFD+ASEILGYDLL +CK GPK +LDSTEVSQPAIFV SMAAVEKLR EEGD A++ ATCA+GLSLGEYSALCFA A+SF DGVK+TKAR GEAMQAA+DA D SMVSVIGLS D V EIC+AA+E+SGE +QIAN+LC+GNYAVSGSSKACD VE+IAKPDFKARMTVRLAVAGAFHTDFM  AV  L  VL  +E+KKPRIPV+SNVDA+PHSDP+VIK +L  QVT+PV +E ++ +++ K +E   E GPGKV AGILKR D+KA+ +N++V
Sbjct:   38 SDTDFDDFSSKVSFMFPGQGAQFVGMCSEVAENVPAAKALFDEASEILGYDLLTRCKEGPKELLDSTEVSQPAIFVASMAAVEKLRQEEGDEAIDAATCAMGLSLGEYSALCFADAISFADGVKITKAR-GEAMQAAADAVDSSMVSVIGLSKDVVSEICEAASEKSGEKIQIANYLCNGNYAVSGSSKACDTVEEIAKPDFKARMTVRLAVAGAFHTDFMAPAVSALEEVLADVEIKKPRIPVISNVDAKPHSDPEVIKKLLATQVTSPVLWENTMASILEKDFERAVELGPGKVTAGILKRTDRKAECSNVEV 351          
BLAST of mRNA_P-fluviatile_contig1.190.1 vs. uniprot
Match: A0A6S9ET31_9STRA ([Acyl-carrier-protein] S-malonyltransferase n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9ET31_9STRA)

HSP 1 Score: 442 bits (1138), Expect = 4.990e-145
Identity = 223/320 (69.69%), Postives = 268/320 (83.75%), Query Frame = 2
Query:   23 SGLRMSDTDFAEYDSKVTFMFPGQGAQYVGMAADICDEVPKAKELFDKASEILGYDLLEKCKTGPKGVLDSTEVSQPAIFVCSMAAVEKLRLEEGDAAVNEATCALGLSLGEYSALCFAGALSFEDGVKVTKARWGEAMQAASDATDGSMVSVIGLSSDKVQEICDAAAEQSGEPVQIANFLCSGNYAVSGSSKACDVVEQIAKPDFKARMTVRLAVAGAFHTDFMEAAVDKLGTVLDSIEVKKPRIPVVSNVDAEPHSDPDVIKDILKKQVTNPVQFEQSLGNVMAKGYEYGYECGPGKVVAGILKRVDKKAKITNIQV 982
            S L  SD+DF ++ SKV+FMFPGQGAQ+VGM AD+C++VP AK LFD+ASEILGYDLLE+C  GPK +LDSTEVSQPAIFV SMAAVEKL+ EEG  AV+ ATCA+GLSLGEYSALCFA A+SF DGVK+TKAR GEAMQ+A+DA D  MVSVIGL  D V E+C+AAAE+SG+ ++IANFLC+GNYAVSG+S+ACDVV +IAKPDFKARMTV+LAVAGAFHTDFM  AV  L  VL  IE+KKPRIPV+SNVDA PHSDP+ IK +L  QVT+PV +E ++ ++++KG+E   E GPGKV AGILKR DKKA+  N++V
Sbjct:   35 SPLMASDSDFDDFTSKVSFMFPGQGAQFVGMCADVCNDVPAAKALFDEASEILGYDLLERCTNGPKELLDSTEVSQPAIFVASMAAVEKLKQEEGQEAVDAATCAMGLSLGEYSALCFADAISFADGVKITKAR-GEAMQSAADAVDSGMVSVIGLGKDVVAELCEAAAEKSGKSIRIANFLCNGNYAVSGASEACDVVTEIAKPDFKARMTVKLAVAGAFHTDFMAPAVSALEEVLAGIEIKKPRIPVISNVDASPHSDPETIKKLLATQVTSPVLWENTMQSILSKGFERAVELGPGKVTAGILKRTDKKAECKNVEV 353          
BLAST of mRNA_P-fluviatile_contig1.190.1 vs. uniprot
Match: K0R6U7_THAOC ([Acyl-carrier-protein] S-malonyltransferase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R6U7_THAOC)

HSP 1 Score: 441 bits (1135), Expect = 1.130e-144
Identity = 230/321 (71.65%), Postives = 265/321 (82.55%), Query Frame = 2
Query:   23 SGLRMSDTDFAEYDSKVTFMFPGQGAQYVGMAADICDEVPKAKELFDKASEILGYDLLEKCKTGPKGVLDSTEVSQPAIFVCSMAAVEKLRLEEGDAAVNEATCALGLSLGEYSALCFAGALSFEDGVKVTKARWGEAMQAASDATDGSMVSVIGLSSDKVQEICDAAAEQSGEPVQIANFLCSGNYAVSGSSKACDVVEQIAKPDFKARMTVRLAVAGAFHTDFMEAAVDKLGTVLDSIEVKKPRIPVVSNVDAEPHSDPDVIKDILKKQVTNPVQFEQSLGNVM-AKGYEYGYECGPGKVVAGILKRVDKKAKITNIQV 982
            + LRM+DTDF ++ SKVTFMFPGQGAQ+VGMA + C  VP AK LFD+ASEILGYDLL+ C +GPK  LDST VSQPAIFV SMAAVEKLR EEG  AV+ ATC LGLSLGEYSALCFA A+SF DGVKVTKAR GEAMQAASDA D  MVSVIGLS D V+E+C+ A+EQSGE VQ+AN LC+GNYAVSG  KACD V +IAKPDFKARMTV+LAVAGAFHTDFM  AVD L  VL++IE+KKPRIPVVSNVDA+PHSDP VIK++L KQVT+PV +E S+ +V+  KG+E   E GPGKV AG+LKR+DK A  +N+ V
Sbjct:   28 TALRMADTDFDDFSSKVTFMFPGQGAQFVGMAEETCKTVPAAKALFDEASEILGYDLLDLCVSGPKEKLDSTVVSQPAIFVASMAAVEKLRQEEGQEAVDSATCTLGLSLGEYSALCFADAISFADGVKVTKAR-GEAMQAASDAIDTGMVSVIGLSKDVVEELCNKASEQSGEKVQLANLLCNGNYAVSGHMKACDTVAEIAKPDFKARMTVKLAVAGAFHTDFMAPAVDSLKEVLETIEIKKPRIPVVSNVDAKPHSDPAVIKELLAKQVTSPVLWEDSIASVLEGKGFEKAVELGPGKVTAGVLKRIDKSAACSNVGV 347          
BLAST of mRNA_P-fluviatile_contig1.190.1 vs. uniprot
Match: A0A7S4MDP8_9STRA ([Acyl-carrier-protein] S-malonyltransferase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MDP8_9STRA)

HSP 1 Score: 437 bits (1124), Expect = 6.830e-143
Identity = 223/319 (69.91%), Postives = 267/319 (83.70%), Query Frame = 2
Query:   29 LRMSDTDFAE-YDSKVTFMFPGQGAQYVGMAADICDEVPKAKELFDKASEILGYDLLEKCKTGPKGVLDSTEVSQPAIFVCSMAAVEKLRLEEGDAAVNEATCALGLSLGEYSALCFAGALSFEDGVKVTKARWGEAMQAASDATDGSMVSVIGLSSDKVQEICDAAAEQSGEPVQIANFLCSGNYAVSGSSKACDVVEQIAKPDFKARMTVRLAVAGAFHTDFMEAAVDKLGTVLDSIEVKKPRIPVVSNVDAEPHSDPDVIKDILKKQVTNPVQFEQSLGNVMAKGYEYGYECGPGKVVAGILKRVDKKAKITNIQV 982
            L  SD DF + + ++V+FMFPGQGAQ+VGM  D+C EVP AK+LFD+ASEILGYDLLE+C  GPK VLDSTEVSQPAIFV SMAAVEKLR E+G+ AV+ ATCA+GLSLGEYSALCFAGAL F DGVKVTKAR GEAMQAASDA +  MVSVIGL+ +KV E+C+AA E+SGE ++IANFLC+GNYAVSG  KACDVV +IAKP+FKARMTV+LAVAGAFHTDFM  AV  L  VL++IE+KKPRIPV+SNVDA+PHSDP+ IK +L  QVT+PV +E ++ +++A G+E   E GPGKV AGILKR  KKA+ TN++V
Sbjct:   39 LSASDNDFDDDFSTQVSFMFPGQGAQFVGMCDDLCKEVPAAKDLFDQASEILGYDLLERCTEGPKEVLDSTEVSQPAIFVASMAAVEKLRQEQGEEAVDAATCAMGLSLGEYSALCFAGALDFADGVKVTKAR-GEAMQAASDAVESGMVSVIGLAKEKVAEVCEAAKEKSGEEIKIANFLCNGNYAVSGGLKACDVVAEIAKPEFKARMTVKLAVAGAFHTDFMAPAVSSLEEVLETIELKKPRIPVISNVDAKPHSDPETIKKLLATQVTSPVLWENTMDSMLASGFERAVELGPGKVTAGILKRFSKKAECTNVEV 356          
BLAST of mRNA_P-fluviatile_contig1.190.1 vs. uniprot
Match: A0A7S2PW15_9STRA ([Acyl-carrier-protein] S-malonyltransferase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PW15_9STRA)

HSP 1 Score: 434 bits (1117), Expect = 5.710e-142
Identity = 225/321 (70.09%), Postives = 262/321 (81.62%), Query Frame = 2
Query:   23 SGLRM-SDTDFAEYDSKVTFMFPGQGAQYVGMAADICDEVPKAKELFDKASEILGYDLLEKCKTGPKGVLDSTEVSQPAIFVCSMAAVEKLRLEEGDAAVNEATCALGLSLGEYSALCFAGALSFEDGVKVTKARWGEAMQAASDATDGSMVSVIGLSSDKVQEICDAAAEQSGEPVQIANFLCSGNYAVSGSSKACDVVEQIAKPDFKARMTVRLAVAGAFHTDFMEAAVDKLGTVLDSIEVKKPRIPVVSNVDAEPHSDPDVIKDILKKQVTNPVQFEQSLGNVMAKGYEYGYECGPGKVVAGILKRVDKKAKITNIQV 982
            S L M SD DF ++ SKVTFMFPGQGAQ+VGM  + C EVP AK LFD+ASEILGYDLL+ C +GPK  LDST VSQPAIFV SMAAVEKL+ E+G  AV+EATCA+GLSLGEYSALCFAGA+SF DGVKVTKAR GEAMQAASDA D  MVSVIGLS +KV E+C+AA+E+SGE +QIAN LC+GNYAVSG  KACD + +IAKP+FKARMTV+LAVAGAFHTDFM  AV+ L  VL+ IE+ KPRIPVVSNVDA PHSDP  IK +L KQVT PV +E S+ +V++KG+E   E GPGKV AG+LKR+DK A   N++V
Sbjct:   29 SSLHMASDNDFDDFTSKVTFMFPGQGAQFVGMCEETCKEVPAAKALFDEASEILGYDLLDLCVSGPKEKLDSTVVSQPAIFVASMAAVEKLKAEKGQEAVDEATCAMGLSLGEYSALCFAGAISFADGVKVTKAR-GEAMQAASDAIDTGMVSVIGLSKEKVGELCEAASEKSGEKIQIANLLCNGNYAVSGHMKACDTLAEIAKPEFKARMTVKLAVAGAFHTDFMAPAVESLEKVLEDIEINKPRIPVVSNVDASPHSDPATIKKLLAKQVTAPVMWEDSVASVLSKGFERAMELGPGKVTAGVLKRIDKTAACENVEV 348          
BLAST of mRNA_P-fluviatile_contig1.190.1 vs. uniprot
Match: B8C2A9_THAPS ([Acyl-carrier-protein] S-malonyltransferase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C2A9_THAPS)

HSP 1 Score: 432 bits (1111), Expect = 5.940e-141
Identity = 222/321 (69.16%), Postives = 261/321 (81.31%), Query Frame = 2
Query:   23 SGLRM-SDTDFAEYDSKVTFMFPGQGAQYVGMAADICDEVPKAKELFDKASEILGYDLLEKCKTGPKGVLDSTEVSQPAIFVCSMAAVEKLRLEEGDAAVNEATCALGLSLGEYSALCFAGALSFEDGVKVTKARWGEAMQAASDATDGSMVSVIGLSSDKVQEICDAAAEQSGEPVQIANFLCSGNYAVSGSSKACDVVEQIAKPDFKARMTVRLAVAGAFHTDFMEAAVDKLGTVLDSIEVKKPRIPVVSNVDAEPHSDPDVIKDILKKQVTNPVQFEQSLGNVMAKGYEYGYECGPGKVVAGILKRVDKKAKITNIQV 982
            S +RM SD DF ++ SKV+FMFPGQGAQ+VGM  D+C EVP AK LFD+ASEILGYDLL  C  GPK  LDST VSQPAIFV SMAAVEKLR EEG  AV+ ATCA+GLSLGEYSALCFAGA+SF DGVKVTKAR GEAMQAASDA D  MVSVIGL  +K  E+C+AA+E+SGE +QIAN LC GNYAVSG  KACDVV +IAKPDFKARMTV+LAVAGAFHTDFM  AVD L  VL+ I+++KPRIPV+SNVDA+PHSDP  IK++L KQVT+PV +E S+ +++  G+E   E GPGKV  G+LKR++K A  +N++V
Sbjct:   37 SSMRMASDNDFDDFSSKVSFMFPGQGAQFVGMCGDVCKEVPAAKALFDEASEILGYDLLSICTEGPKEKLDSTVVSQPAIFVASMAAVEKLRQEEGQDAVDAATCAMGLSLGEYSALCFAGAISFADGVKVTKAR-GEAMQAASDAIDTGMVSVIGLDKEKCTELCEAASEKSGEKIQIANLLCDGNYAVSGHMKACDVVAEIAKPDFKARMTVKLAVAGAFHTDFMAPAVDSLKEVLEGIDIQKPRIPVISNVDAKPHSDPATIKELLAKQVTSPVLWEDSMASMLEHGFERAVELGPGKVTTGVLKRINKTAASSNVEV 356          
BLAST of mRNA_P-fluviatile_contig1.190.1 vs. uniprot
Match: A0A0G4FY21_VITBC ([Acyl-carrier-protein] S-malonyltransferase n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FY21_VITBC)

HSP 1 Score: 429 bits (1103), Expect = 1.140e-139
Identity = 219/321 (68.22%), Postives = 257/321 (80.06%), Query Frame = 2
Query:   17 RGSGLRMS-DTDFAEYDSKVTFMFPGQGAQYVGMAADICDEVPKAKELFDKASEILGYDLLEKCKTGPKGVLDSTEVSQPAIFVCSMAAVEKLRLEEGDAAVNEATCALGLSLGEYSALCFAGALSFEDGVKVTKARWGEAMQAASDATDGSMVSVIGLSSDKVQEICDAAAEQSGEPVQIANFLCSGNYAVSGSSKACDVVEQIAKPDFKARMTVRLAVAGAFHTDFMEAAVDKLGTVLDSIEVKKPRIPVVSNVDAEPHSDPDVIKDILKKQVTNPVQFEQSLGNVMAKGYEYGYECGPGKVVAGILKRVDKKAKITNI 976
            R S LRMS D  FA++  K  F FPGQGAQYVGMA +  + VPKAKELFDKASEILGYDLLE+C+ GPK +LD T V QPAIFV SMAAVEKLR E G+   N+ATC LGLSLGEYSALC+AGALSFEDGVK+TK R GEAMQ+A+D  +  MVSVIGL SD V +ICD AAE++GEPV +AN+LC+GNY  SGS  AC+ V  IAKPDFKARMTV+LAVAGAFHTDFM+ AV+KL  VL  +E+K PRIPV+SNVDA PHSDPD IK +L KQVT+PVQ+E S+  V+ +GYE GYE GPG V+AGILKR+DK  ++ +I
Sbjct:   42 RLSRLRMSADDGFADWSGKTAFFFPGQGAQYVGMATETAEAVPKAKELFDKASEILGYDLLERCRDGPKDLLDKTAVCQPAIFVASMAAVEKLRQERGEEEANKATCCLGLSLGEYSALCYAGALSFEDGVKITKTR-GEAMQSAADGAESGMVSVIGLDSDTVGKICDKAAEKTGEPVIVANYLCNGNYVTSGSKAACEEVMAIAKPDFKARMTVKLAVAGAFHTDFMKPAVEKLEAVLSGVEIKTPRIPVISNVDARPHSDPDTIKQLLAKQVTSPVQWESSVKAVLERGYESGYELGPGTVLAGILKRIDKTKQLASI 361          
BLAST of mRNA_P-fluviatile_contig1.190.1 vs. uniprot
Match: B7G3D4_PHATC ([Acyl-carrier-protein] S-malonyltransferase n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G3D4_PHATC)

HSP 1 Score: 426 bits (1095), Expect = 1.250e-138
Identity = 215/322 (66.77%), Postives = 262/322 (81.37%), Query Frame = 2
Query:   17 RGSGLRMSDTDFAEYDSKVTFMFPGQGAQYVGMAADICDEVPKAKELFDKASEILGYDLLEKCKTGPKGVLDSTEVSQPAIFVCSMAAVEKLRLEEGDAAVNEATCALGLSLGEYSALCFAGALSFEDGVKVTKARWGEAMQAASDATDGSMVSVIGLSSDKVQEICDAAAEQSGEPVQIANFLCSGNYAVSGSSKACDVVEQIAKPDFKARMTVRLAVAGAFHTDFMEAAVDKLGTVLDSIEVKKPRIPVVSNVDAEPHSDPDVIKDILKKQVTNPVQFEQSLGNVMAKGYEYGYECGPGKVVAGILKRVDKKAKITNIQV 982
            R S  + SD+DF ++ S+  FMFPGQGAQ+VGM  D+  +VPKA+ LFD+ASEILGYDLL+ C  GPK  LDST VSQPAIFV SMAAVEKLR E+GD A+N ATCA+GLSLGEYSALCFA A+SF DGVK+TKAR GEAMQAA+DA D  MVSVIGL  +KV E+C  A+E+SGE +QIANFLCSGNYAVSGSSKAC+ V ++AKP+FKARMTV+LAVAGAFHTDFM+ AV  L  VL  +E++KPRIPV+SNVDA+PHSDP+ IK +L  QVT+PV +E ++  +++ G+E  +E GPGKV AGILKR DKKA+  N++V
Sbjct:   32 RTSSRQASDSDFDDFSSQTAFMFPGQGAQFVGMCGDVVKDVPKAQALFDQASEILGYDLLQVCVDGPKEKLDSTVVSQPAIFVASMAAVEKLRQEQGDDAINAATCAMGLSLGEYSALCFADAISFADGVKITKAR-GEAMQAAADAVDSGMVSVIGLDKEKVAELCAMASEKSGERIQIANFLCSGNYAVSGSSKACEAVNELAKPEFKARMTVKLAVAGAFHTDFMKPAVASLEKVLADVEIQKPRIPVISNVDAKPHSDPETIKKLLATQVTSPVLWENTMDLMLSSGFEKAFELGPGKVTAGILKRFDKKAECENVEV 352          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.190.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JN04_9PHAE3.620e-19789.91[Acyl-carrier-protein] S-malonyltransferase n=2 Ta... [more]
A0A835ZIZ1_9STRA2.200e-16879.75[Acyl-carrier-protein] S-malonyltransferase n=1 Ta... [more]
A0A7S2PIE1_9STRA3.770e-14771.43[Acyl-carrier-protein] S-malonyltransferase n=1 Ta... [more]
A0A6S9ET31_9STRA4.990e-14569.69[Acyl-carrier-protein] S-malonyltransferase n=3 Ta... [more]
K0R6U7_THAOC1.130e-14471.65[Acyl-carrier-protein] S-malonyltransferase n=1 Ta... [more]
A0A7S4MDP8_9STRA6.830e-14369.91[Acyl-carrier-protein] S-malonyltransferase n=1 Ta... [more]
A0A7S2PW15_9STRA5.710e-14270.09[Acyl-carrier-protein] S-malonyltransferase n=1 Ta... [more]
B8C2A9_THAPS5.940e-14169.16[Acyl-carrier-protein] S-malonyltransferase n=1 Ta... [more]
A0A0G4FY21_VITBC1.140e-13968.22[Acyl-carrier-protein] S-malonyltransferase n=1 Ta... [more]
B7G3D4_PHATC1.250e-13866.77[Acyl-carrier-protein] S-malonyltransferase n=3 Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:2432460..2439138 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score567.4
Seed ortholog evalue4.3e-159
Seed eggNOG ortholog2880.D8LN46
Preferred nameFABD
KEGG rclassRC00004,RC00039,RC02727
KEGG koko:K00645,ko:K12879
KEGG ReactionR01626,R11671
KEGG Pathwayko00061,ko00333,ko01100,ko01130,ko01212,ko03013,ko03040,map00061,map00333,map01100,map01130,map01212,map03013,map03040
KEGG ModuleM00082,M00405,M00406
EggNOG free text desc.[acyl-carrier-protein] S-malonyltransferase activity
EggNOG OGsCOG0331@1,KOG2926@2759
EC2.3.1.39
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01004,ko03019,ko03041
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionmalonyl-CoA:ACP transacylase
Ec32 orthologEc-05_003450.1
Exons7
Model size2739
Cds size978
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815302.07861-UTR-P-fluviatile_contig1:2432459..24324661622815302.07861-UTR-P-fluviatile_contig1:2432459..2432466Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 2432460..2432466 +
1693561448.0286834-UTR-P-fluviatile_contig1:2432459..24324661693561448.0286834-UTR-P-fluviatile_contig1:2432459..2432466Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 2432460..2432466 +
1622815302.3347461-UTR-P-fluviatile_contig1:2437384..24391381622815302.3347461-UTR-P-fluviatile_contig1:2437384..2439138Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 2437385..2439138 +
1693561448.2400503-UTR-P-fluviatile_contig1:2437384..24391381693561448.2400503-UTR-P-fluviatile_contig1:2437384..2439138Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 2437385..2439138 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815302.088964-CDS-P-fluviatile_contig1:2432466..24325951622815302.088964-CDS-P-fluviatile_contig1:2432466..2432595Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2432467..2432595 +
1693561448.0412376-CDS-P-fluviatile_contig1:2432466..24325951693561448.0412376-CDS-P-fluviatile_contig1:2432466..2432595Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2432467..2432595 +
1622815302.0981565-CDS-P-fluviatile_contig1:2432944..24330461622815302.0981565-CDS-P-fluviatile_contig1:2432944..2433046Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2432945..2433046 +
1693561448.1704774-CDS-P-fluviatile_contig1:2432944..24330461693561448.1704774-CDS-P-fluviatile_contig1:2432944..2433046Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2432945..2433046 +
1622815302.1094077-CDS-P-fluviatile_contig1:2433451..24336391622815302.1094077-CDS-P-fluviatile_contig1:2433451..2433639Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2433452..2433639 +
1693561448.1877139-CDS-P-fluviatile_contig1:2433451..24336391693561448.1877139-CDS-P-fluviatile_contig1:2433451..2433639Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2433452..2433639 +
1622815302.1747181-CDS-P-fluviatile_contig1:2434723..24348501622815302.1747181-CDS-P-fluviatile_contig1:2434723..2434850Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2434724..2434850 +
1693561448.2025323-CDS-P-fluviatile_contig1:2434723..24348501693561448.2025323-CDS-P-fluviatile_contig1:2434723..2434850Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2434724..2434850 +
1622815302.2184181-CDS-P-fluviatile_contig1:2435304..24354691622815302.2184181-CDS-P-fluviatile_contig1:2435304..2435469Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2435305..2435469 +
1693561448.2130027-CDS-P-fluviatile_contig1:2435304..24354691693561448.2130027-CDS-P-fluviatile_contig1:2435304..2435469Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2435305..2435469 +
1622815302.3152187-CDS-P-fluviatile_contig1:2436244..24363611622815302.3152187-CDS-P-fluviatile_contig1:2436244..2436361Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2436245..2436361 +
1693561448.2226338-CDS-P-fluviatile_contig1:2436244..24363611693561448.2226338-CDS-P-fluviatile_contig1:2436244..2436361Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2436245..2436361 +
1622815302.3259969-CDS-P-fluviatile_contig1:2437234..24373841622815302.3259969-CDS-P-fluviatile_contig1:2437234..2437384Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2437235..2437384 +
1693561448.2315645-CDS-P-fluviatile_contig1:2437234..24373841693561448.2315645-CDS-P-fluviatile_contig1:2437234..2437384Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2437235..2437384 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.190.1prot_P-fluviatile_contig1.190.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig1 2432467..2437384 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig1.190.1

>prot_P-fluviatile_contig1.190.1 ID=prot_P-fluviatile_contig1.190.1|Name=mRNA_P-fluviatile_contig1.190.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=326bp
MSSRGSGLRMSDTDFAEYDSKVTFMFPGQGAQYVGMAADICDEVPKAKEL
FDKASEILGYDLLEKCKTGPKGVLDSTEVSQPAIFVCSMAAVEKLRLEEG
DAAVNEATCALGLSLGEYSALCFAGALSFEDGVKVTKARWGEAMQAASDA
TDGSMVSVIGLSSDKVQEICDAAAEQSGEPVQIANFLCSGNYAVSGSSKA
CDVVEQIAKPDFKARMTVRLAVAGAFHTDFMEAAVDKLGTVLDSIEVKKP
RIPVVSNVDAEPHSDPDVIKDILKKQVTNPVQFEQSLGNVMAKGYEYGYE
CGPGKVVAGILKRVDKKAKITNIQV*
back to top

mRNA from alignment at P-fluviatile_contig1:2432460..2439138+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig1.190.1 ID=mRNA_P-fluviatile_contig1.190.1|Name=mRNA_P-fluviatile_contig1.190.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=6679bp|location=Sequence derived from alignment at P-fluviatile_contig1:2432460..2439138+ (Porterinema fluviatile SAG_2381)
CCGAGGCATGTCAAGCCGTGGCAGTGGTTTGCGAATGTCGGATACCGATT TCGCGGAATACGACAGCAAGGTTACCTTCATGTTCCCAGGACAGGGAGCC CAGTACGTGGGCATGGCGGCTGATATTTGCGATGAGGTGTGAATGCCTTT TTTCTCCCCTTTACTCGTTGGAACTCCGCGGGTTGAAGGTTTACCTCACA ACCCATTTGTGCTTTTCGTTCTGCTTTCTTGTCGGCACCTAGGAGGCACA CATACCGTTTGTCGGATCGCTACGACGTTGGATGCTCGGCATGCACAGCC GTTGCTGTCATCTGAAGCCACGGGCAGGTTTAGACCGTCGAAATTTTTGT GCCATTGATGTCTCGCGCCTGCATGTTTTCTCTCATGAAACTGTATGGAA GCGGCTGTGTCCGTTTGTTGTTCCCGTCTTTCTATGCGCGTACTCACCGG CCCGATTGTGTGCGTTTGTGTATGTTTCTATCCAGGTTCCGAAGGCGAAA GAGCTTTTCGATAAGGCCAGCGAGATCTTGGGCTACGACCTCTTGGAGAA GTGCAAGACCGGCCCCAAGGGCGTACTCGACTCCACGGTGCGGCTGGAAA AGTTGAAGGCTGATTATGCTTTTCGGCTCATTTTGTCGAGGGTCTACAGG CGGGCAATCCTCCCGTTCCATGTGCACATGTGTCTTCCCTGTCACCCCCG CTTCGTCATGCACCAATCAGGTTACATTTATTCTCCAATTGTCATTCAGA CGACTCACCAGCATTGGGAGACTTTCCGTCGTCTGTACCATGTTTGAAGC TCGAGCTTTCCTTTGCTGCCTCGGAGGGGGCGGCGAGTCTCTCAATCTCA CCCACTAGCATGTGATGATGCTTGATGCTCGAGTCAATCCCGTGAACCAC GAATCGTGAATGCGTTCCCCGCGTATTGCTATTACCTGGGGTCCTGCCGA CCTGCCCTCATTCCATGATTGCCATCGTCGCAACGCCGCCAGGAGGTGAG CCAGCCGGCGATCTTCGTGTGCTCGATGGCAGCCGTGGAGAAGCTCAGAT TGGAGGAGGGGGACGCGGCCGTGAACGAGGCCACGTGTGCGCTGGGCCTG AGCCTGGGGGAGTACTCGGCCTTGTGCTTCGCGGGTGCCCTGTCGTTCGA GGACGGTGTTAAGGTCACCAAAGCGAGGTGGTTGCCACGTAATTGTCTAT CCCCGGTTAGCAACAAGCCGATAGCGCCGTTGGAAACGTTTTTGGAGTAG TTGACCGAGAGCTTGATTGGGACGTTGATGGATACTCATTTCTGTCGATG ACGCAGCAGGCTTTGAAGGTCAGCGAGGGGAACTTGGCAGCACTTTAAGG TCCACGGTAAATTGGCGGTGTGTGTTGTTTTGCATGTAAATGAGTTGCGT CGGCGAATCCTACTTGTGCTTGTTATTATGGTATAGATCCTATACGCGTA CGTGTGGGTTTCTGGTGAGTTGTTCGTCGCCCCCGATGCTCTTTATCGCC TGATCGGTGTTGTTAAAGTCACTCTTCGGGAGAACTGTCGATTTTGTCAG TTCATGAAGCGTGTACAGGAACTTGGCTTCTTCAGTACATATGTGTGGTG AAGATTGATTACTTGTTCTTTCGAAATGCTTAGTGCCACTTCCTGCGGAG GTCGGCGAAACGTTTATAGCGGTTTCGTTTATCAGTTCGTCCAGTGGCGA GAGGCATTTCCGGCGTTCGCGTCTGCTATTGATGCGGGCATGTAAAAACC CGACTTCTGGGCATTCGATTTGTCTGCTGGCTCCATCGGAGGGATATTGA TGTGTTATTGAGAGACTGACGCGGCTTCTGGGTCAATTGTTGGCAATATC CCCTGTTCTTTTATCATTGCGGCGCTCGCAAGCAATAGAAGACGGCATCA TAAGCTGCACCGGTCCAGTACGGTCCAGAATTCATTTGGAGGCGCGCAAT TTGTTGCACGTGCCAATTTCGGCTTTCCGTGCGCGAAGATTGTCAATGTT TACGAGTCCCACCGAGCCTGCCGTTTTCCCCAGCATCGTCCTCATAGCGC AAGCCGTCCACACTGCCGTGCTCCCTGTTCTCGTGAATCGCCCCGACACT TGATCACTAAGAGCCAAACGGCTAGATTCTTCGTCGAGCCTCCAAGACTC GCCAGTTTTTAGCTATCCACAACCTTTTCCCTCTTCCTTTTTCTCATCGA TTGGATTCCGCCAACCCCGCCCCATTGCCCGCCTCCGCACCGCACTGCAC TGCTCACCTCGAAGGGGGGAGGCGATGCAGGCGGCATCTGATGCCACGGA CGGGTCTATGGTGAGCGTGATCGGCCTCTCGTCCGACAAGGTCCAGGAGA TCTGCGACGCCGCGGCCGAGCAGTCGGGGGAGCCTGTTCAGGTGTGTAGC TTTCGTTGCAACCATAAGCTGAGTAGACCCCACAGCATCTTGTTGATTTT CAAAGCTCAATATCACGACGGTGAATATTTTACCGATATCAAACGAGGCC TGATTTCAAGCTTGTGACATGTTACGAACGCCGCCTTATATGACATAATC AGCTACTTTGCGGGAAGTACGTGGAACTTAAAATTGGCATTTTTATTTTC TGGAGCTTCACTTCGTCTGTCCTCAAATTGTATGATTTTGCAGTTGCGAA GCCCTACGAACTTGTTTGGCTTGATCAAGGTGTCAATCTAGACTCTATCC GTTCTCCAGGAAGCCTACAAACGCACCCGTAAATTTTTGCTTGATCAAAT CTCGACTCTGTATGGCACCTTTGTGCCACTTCCGCCGTGACATATTTAGA TCATTCTTGATGAGCGTGTCGGACGTGTCCCTGTTCGCGGCGCAGATCGC AAACTTTTTGTGCAGCGGGAACTATGCTGTGTCCGGATCTTCCAAGGCGT GCGACGTGGTGGAGCAGATCGCAAAGCCGGACTTCAAGGCACGCATGACC GTAAGGCTCGCCGTCGCGGGGGCATTCCACACCGATTTCATGGAGGCGGC CGTGGACAAGGTAGGGAATGAACGAGATGCACCACTTCTTGTTGAGTCGC CCGTCGTCAACCGTGGTCGCCGCGCCGCCTCTGATGCAGCACGTTGTCGT ACGATTGCCTGCGTGAACGACGAGAACGACGGCCACTTTTGGGGCGACTG CTCGTTTTTCAGTCATCGACACAGGTAGGGTAGCGTGCGGAGAAAGAAAT CAGCTCGAAACCGTGAAAAGATTTTTGACGAGAGCATCGCCGAAGACATC AGACACGGTACACGGCTCGTGCAAATATAGCGCTAAAGGTGTATGGGACG GAGCAAGTCGTCGAACCTCGGCGACGAACTGAAGTTTCTTCACCGCATGC GCTAGGTGCAATGCTATTCCAATATTACGAGGGGGGGGGGGTTCATCGCG GGATCATGTGCCCCTTCGAACAAGTTTACGACCCACGTTTGATGGGTCTG AAGCGTCGTTTGTCACTAGATAATTGTTCAAATCGTAGTCTAGAGACCGA GAGCAGGGAAATGATAGACCGGGAAATCAAGCTGAATGCATCTGAACAAG CCGGAAAATATTGTTTTTGATATTCCTCTGCGTTGATCCCCGGGTAAATT TACGGGGGATTGTCTACCCGGAAGGACGTTGCGTTTTCTACGCCAGTTCG CAACAGAAAATTGTCTGGTTCACATAATGCCTTGCGCAGGGCTAACGTCT TTGTTGAATCCGCCGTCCTTCCAGTGGCCATAAAATCACTTGCCTGTACC GGTTGCAAAAATTTGAACACTTTTTAATCGCGCAGTTGGGTACCGTGCTG GACTCTATCGAGGTCAAGAAGCCGCGGATTCCGGTGGTGTCAAACGTCGA CGCGGAGCCGCACTCAGACCCAGATGTGATCAAGGACATCCTCAAGAAGC AGGTGAGCACCGACCACAATTTCGAATAGTTCCATGAGACGAGAGGCACC ATGTGAAGGTGAGTAAATGCGTGAGAAAATATGGGGCGACAGGAAAGCTG GGTGTGTCAATCTGTCACGACAGTGTCAAGGTACAGGATGTGGGACCGGC CAAATTCGATTGCATTCACGTTTCGTAAAGTGCACTTGACGGAGAGCCTA GAATCGCACCAAAATTCCCTAGACGGAAGCTGGTGTGAGCTGGTAGGAGG CTGAGTGAACAGGGTGTGGTTTCAAGCAGGGTCTTCGATTGCCGCCGGCT GAAATGACAGTACTTCTAGCAACACGGATGACGTGCTTTTGGCTGGGCGA TTTATCAGCCGTATTTTCCTGTGCTTCACACAGATTTCGTCGTTGTTATT CTTGCGCCGAATGCCGGCTTCTCGCGGGAACATCCGCGTTTCATTCTGCA ACAATCATTGCTCCCTCTCTGCGATTCGTGGAAACGCTCATGAACCTCAA GGGTCGATTCCAGGACAAGCTGAAGCCTCCACCCTGGCTGCGATCAGTAC TTGCCCTTCGCTGCTGTGGTGCAGAAAAACTGGGCTCCATGCTACTGCTC ACTTAGCACATCTGCAGATCGAAGCTGCCCTGTCGTACTTGCGACAACTC GTACACACTCTCAGGTGGTGAACGTGGGCATCGATGAAGAAGTGGGCTCC CCTCCCCTGTTAGTCTATGATAGCTCGTGAACAGCAGACGACGTACGTAG CCGCTGTCCGTGAAATGGAAGTGATGGTTGTCTTCAACGCACGGAAGTGG TCGACAGGTACGTTCGTGCTACTGCTGGTGAGCCCCTGACGCGGAGGCGT AAATAATGACTCTTTCGCCTCTCAGGTGACGAACCCGGTCCAGTTTGAGC AGAGCCTTGGCAACGTGATGGCCAAGGGCTACGAGTACGGTTACGAGTGC GGGCCTGGCAAGGTCGTTGCGGGCATCTTGAAGCGCGTCGACAAGAAGGC GAAAATTACCAACATTCAGGTCTAAAAAGGCGCTGGCCGACATGTTGGGT GGGGCGCTTGAGCTGGGAGGCGAAAGTGTGATGAACACGGCCAAGTGGGG GCGCTCTGGTTGCGCTGATGCCCCCCATTGCCACCGAGGTCCCTCCTCTT CGAGGCTAGAGAGGAAGGCCTTCTGTAGAACATCTCGAGTCATTGGCCAG TGATGATGACAGAAGTACTGGTGGAGGCAAATCGTCGACTGTTGGGCGCT TTAGGTTTTCGGAGAATCACTAAGTAGACAATAGGGGCTGATGAGGACTT CCTGGACGATATTGGCGTTTGCTAGATGACCAGTGCTTCAGCTGGGGTAT GGTCGGTCGTCAGACAGCGGTGTTCGCGCAAACCCCCACACATTCCAGGC TGTACCCTGAGATTGCATTCACGGCAGACTAGGGACGCGCGGTCGGACGG GGCGCCTCCCATGTTGGGGTACCCACCTCACGCCTAAATGGTATGTCATG TGGCTCTCCTAGTCGAGTTCTCCCATGAATGATAATTGACTCTTCAGTGG GCCCCCAAGGCTTCAATTGCATGATTGAGGCGCGAACACCGAACTCGCGT GCCGTGGACGCTTTCAGAAGGGTATCGTGTTTGTTTTGCTTCAGCTTCTC TGCGAACATCATGGTTCTCTTTGAAAGGCTGGCGCTTCCTGCTGGTTGTG GACATTTCCAGGGAGGGAGTCATTTACCCGTAGTCCATCCGTGGTCTCCC CGTTCCCGTTGTGCCGCGTAGTCTGGCAAAGTTCCTGGTTGGAATCAGAG TACTATAAGGATAGTCATTTCGGTTGGTAGACTCATGGCCAGGCTTAGGG ATGGCATCAGTACCCAACGCTTATGGGTGCCAAACTGGCCTTTGCTTGCC CTGTAGAGTAGACGCTCGCCGCTGTAGTGGTCCATTTGACTGCCGGACTA GACCAAATCGTGGACCTGCTACAGAGTTTGATGCCATAAGACCGCAGAGC TGAGAAAGCATGGGTTGGGTTTTTCAAAAGTTACAGCAGTCTGCACTGTG TCTCCTAAACGGGGACCGTGTGCCAAGTACTACGATATAGTTCACACCTT TGCAGACCATCACGGTTACGGATGTTTTCACACCCCTAAAATAAGACCGC CGGGGTGTGTTGGCATACTTTTTTTTTTGGCGTATGACATTAAGAGCGGA TCCTGGCCTGCCTGCCGTAACCATTTCGCTCGGAGCGAGGAGCGTTCGTG TCTAATGTCAGGTCTTGGAGGTTGTGAGGTCAGACATGCACGGAGCCTTC TTCGCGAGCGAGACCCATCGGCTCCAAACGAGGTTCTGCGTTGTTTTTGA GACGACCGGTGTCTGCAGTGGACGAATTCTCTTCGAAGCTGTCTTTGTGG TTGTTAGATGCTTCATTCGATAACGAGGCTGTTCCATGGGTGAATTTTCC GGTTTGTGGGCAACATGGTGTACCCTTGGACAATTATATTGGTACCGCGT TTGGAATGCTTGCTCAAGCATTCAAAACGAATGGAGAGGCTGACGGCGCT AACAAGGATGGTACAGAATGTTGACGGCGAACCGAGGGGTCTTGCTTTGT GTTTCATGTAAGGCTACGCTAAAAGATAACTGCCGTCTGGCAGTTTCGAC ATTTTAGGCAGATCCCAAGTCACTTGTGGCATTCAGGTTGTACTCCGGAG TACTCCGTATATTTTTTGTCGAATTGCCTTTGAGCTCCAGTCACGTGACG ATTTTTTGCGTTCAATGACTACAACAACA
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig1:2432460..2439138+

>mRNA_P-fluviatile_contig1.190.1 ID=mRNA_P-fluviatile_contig1.190.1|Name=mRNA_P-fluviatile_contig1.190.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1956bp|location=Sequence derived from alignment at P-fluviatile_contig1:2432460..2439138+ (Porterinema fluviatile SAG_2381)
ATGTCAAGCCGTGGCAGTGGTTTGCGAATGTCGGATACCGATTTCGCGGA
ATACGACAGCAAGGTTACCTTCATGTTCCCAGGACAGGGAGCCCAGTACG
TGGGCATGGCGGCTGATATTTGCGATGAGATGTCAAGCCGTGGCAGTGGT
TTGCGAATGTCGGATACCGATTTCGCGGAATACGACAGCAAGGTTACCTT
CATGTTCCCAGGACAGGGAGCCCAGTACGTGGGCATGGCGGCTGATATTT
GCGATGAGGTTCCGAAGGCGAAAGAGCTTTTCGATAAGGCCAGCGAGATC
TTGGGCTACGACCTCTTGGAGAAGTGCAAGACCGGCCCCAAGGGCGTACT
CGACTCCACGGTTCCGAAGGCGAAAGAGCTTTTCGATAAGGCCAGCGAGA
TCTTGGGCTACGACCTCTTGGAGAAGTGCAAGACCGGCCCCAAGGGCGTA
CTCGACTCCACGGAGGTGAGCCAGCCGGCGATCTTCGTGTGCTCGATGGC
AGCCGTGGAGAAGCTCAGATTGGAGGAGGGGGACGCGGCCGTGAACGAGG
CCACGTGTGCGCTGGGCCTGAGCCTGGGGGAGTACTCGGCCTTGTGCTTC
GCGGGTGCCCTGTCGTTCGAGGACGGTGTTAAGGTCACCAAAGCGAGGTG
GAGGTGAGCCAGCCGGCGATCTTCGTGTGCTCGATGGCAGCCGTGGAGAA
GCTCAGATTGGAGGAGGGGGACGCGGCCGTGAACGAGGCCACGTGTGCGC
TGGGCCTGAGCCTGGGGGAGTACTCGGCCTTGTGCTTCGCGGGTGCCCTG
TCGTTCGAGGACGGTGTTAAGGTCACCAAAGCGAGGTGGGGGGAGGCGAT
GCAGGCGGCATCTGATGCCACGGACGGGTCTATGGTGAGCGTGATCGGCC
TCTCGTCCGACAAGGTCCAGGAGATCTGCGACGCCGCGGCCGAGCAGTCG
GGGGAGCCTGTTCAGGGGGGAGGCGATGCAGGCGGCATCTGATGCCACGG
ACGGGTCTATGGTGAGCGTGATCGGCCTCTCGTCCGACAAGGTCCAGGAG
ATCTGCGACGCCGCGGCCGAGCAGTCGGGGGAGCCTGTTCAGATCGCAAA
CTTTTTGTGCAGCGGGAACTATGCTGTGTCCGGATCTTCCAAGGCGTGCG
ACGTGGTGGAGCAGATCGCAAAGCCGGACTTCAAGGCACGCATGACCGTA
AGGCTCGCCGTCGCGGGGGCATTCCACACCGATTTCATGGAGGCGGCCGT
GGACAAGATCGCAAACTTTTTGTGCAGCGGGAACTATGCTGTGTCCGGAT
CTTCCAAGGCGTGCGACGTGGTGGAGCAGATCGCAAAGCCGGACTTCAAG
GCACGCATGACCGTAAGGCTCGCCGTCGCGGGGGCATTCCACACCGATTT
CATGGAGGCGGCCGTGGACAAGTTGGGTACCGTGCTGGACTCTATCGAGG
TCAAGAAGCCGCGGATTCCGGTGGTGTCAAACGTCGACGCGGAGCCGCAC
TCAGACCCAGATGTGATCAAGGACATCCTCAAGAAGCAGTTGGGTACCGT
GCTGGACTCTATCGAGGTCAAGAAGCCGCGGATTCCGGTGGTGTCAAACG
TCGACGCGGAGCCGCACTCAGACCCAGATGTGATCAAGGACATCCTCAAG
AAGCAGGTGACGAACCCGGTCCAGTTTGAGCAGAGCCTTGGCAACGTGAT
GGCCAAGGGCTACGAGTACGGTTACGAGTGCGGGCCTGGCAAGGTCGTTG
CGGGCATCTTGAAGCGCGTCGACAAGAAGGCGAAAATTACCAACATTCAG
GTCTAAGTGACGAACCCGGTCCAGTTTGAGCAGAGCCTTGGCAACGTGAT
GGCCAAGGGCTACGAGTACGGTTACGAGTGCGGGCCTGGCAAGGTCGTTG
CGGGCATCTTGAAGCGCGTCGACAAGAAGGCGAAAATTACCAACATTCAG
GTCTAA
back to top