mRNA_P-fluviatile_contig1.186.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig1.186.1 vs. uniprot
Match: D8LN40_ECTSI (60S ribosomal protein L7a n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LN40_ECTSI) HSP 1 Score: 459 bits (1180), Expect = 2.520e-159 Identity = 240/256 (93.75%), Postives = 248/256 (96.88%), Query Frame = 1
Query: 25 MGVAKKQVKKQVKSTPKKVADPLFPAKKKSFRIGRDIQPKVDLSRFVKWPRYIRLQRQRKILVQRLKVPPSINQFSHTLDKNQATELLKVLMKYQPEDKKAKQQRLREIAAAKEAGNEPAPSKAPKVIKFGLKHVTTLIEEQKASLVVIAHDVNPIELVVWLPALCRKMGIPYCIIKGKARLGTLVHQKNAAVIALTSVNKEDESKLSTLKANFKAQFNDGFQRKWGGGIMGLKTQRKLEKRQKAIEAELAKKAQY 792
MGVAKKQVKKQVKSTPKKVADPLFPA+KKSFRIGRDIQPKVDLSRFVKWPRYIRLQRQRKILVQRLKVPPSINQFS +DKNQATELLKVLMKYQPEDKKAKQQRL+EIAAAKEAG EPAPSKAPKVIKFGLKHVTTLIEEQKASLVVIAHDV PIELVVWLPALCRKMGIPYCI+KGKARLGTLVHQKNAAVI LT+VNKEDESKLS LK+NF AQFN+GF RKWGGG+MGLKTQRKLEKRQKAIEAELAKKAQY
Sbjct: 1 MGVAKKQVKKQVKSTPKKVADPLFPARKKSFRIGRDIQPKVDLSRFVKWPRYIRLQRQRKILVQRLKVPPSINQFSKAIDKNQATELLKVLMKYQPEDKKAKQQRLKEIAAAKEAGKEPAPSKAPKVIKFGLKHVTTLIEEQKASLVVIAHDVTPIELVVWLPALCRKMGIPYCIMKGKARLGTLVHQKNAAVICLTTVNKEDESKLSNLKSNFTAQFNEGFVRKWGGGVMGLKTQRKLEKRQKAIEAELAKKAQY 256
BLAST of mRNA_P-fluviatile_contig1.186.1 vs. uniprot
Match: A0A6V1R9A7_HETAK (60S ribosomal protein L7a n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1R9A7_HETAK) HSP 1 Score: 329 bits (844), Expect = 2.200e-108 Identity = 176/242 (72.73%), Postives = 206/242 (85.12%), Query Frame = 1
Query: 79 VADPLFPAKKKSFRIGRDIQPKV-DLSRFVKWPRYIRLQRQRKILVQRLKVPPSINQFSHTLDKNQATELLKVLMKYQPEDKKAKQQRLREIAAAKEA-GNEPAPSKAPKVIKFGLKHVTTLIEEQKASLVVIAHDVNPIELVVWLPALCRKMGIPYCIIKGKARLGTLVHQKNAAVIALTSVNKEDESKLSTLKANFKAQFNDGFQRKWGGGIMGLKTQRKLEKRQKAIEAELAKK--AQY 792
V DPLF AK +SFR+G DI+PK DLSR+VKWPR +R+QRQRKIL+QRLKVPP+I QFS L+KNQATEL K+L+KYQPE KKAKQQRL+E+AAA G +P P+ +K+GLKHVTTLIE+++A LV IAHDVNP+ELVVWLPALCRKMG+P+C++K KARLGTL H+KNAAV+ALT VNKED++KL TL ANF AQFND RKWGGGIMGLKTQRKLEKRQKA+EAELAKK AQY
Sbjct: 19 VKDPLFQAKPRSFRVGGDIRPKKRDLSRYVKWPRNVRIQRQRKILLQRLKVPPAIQQFSQPLEKNQATELFKLLVKYQPETKKAKQQRLKEMAAAGATKGEKPGPT-----LKYGLKHVTTLIEQKEAKLVCIAHDVNPLELVVWLPALCRKMGVPFCVVKDKARLGTLCHKKNAAVVALTEVNKEDKAKLDTLGANFTAQFNDTPVRKWGGGIMGLKTQRKLEKRQKALEAELAKKTSAQY 255
BLAST of mRNA_P-fluviatile_contig1.186.1 vs. uniprot
Match: T0QDT5_SAPDV (60S ribosomal protein L7a n=3 Tax=Saprolegniaceae TaxID=4764 RepID=T0QDT5_SAPDV) HSP 1 Score: 318 bits (816), Expect = 5.490e-104 Identity = 170/245 (69.39%), Postives = 200/245 (81.63%), Query Frame = 1
Query: 64 STPKKVADPLFPAKKKSFRIGRDIQPKVDLSRFVKWPRYIRLQRQRKILVQRLKVPPSINQFSHTLDKNQATELLKVLMKYQPEDKKAKQQRLREIAAAKEAGNEPAPSKAPKVIKFGLKHVTTLIEEQKASLVVIAHDVNPIELVVWLPALCRKMGIPYCIIKGKARLGTLVHQKNAAVIALTSVNKEDESKLSTLKANFKAQFNDG--FQRKWGGGIMGLKTQRKLEKRQKAIEAELAKKAQY 792
++ KK ADPLFP+ K+FR+G DIQPK DLSRFV+WP+ +RLQRQ KIL RLKVPPSINQF++TLDKN AT+L K+L+KYQPE K AK QRLR+IAA KE + P P VIK+GL HVT+LIE +KA +V IAHDV PIELVV+LPALCRKM IPYCI+KGKARLG LVH+KNAAV+ALT VNKED++K +L F+AQFND +RKWGGGIMGLKTQ+KLE R KA+ AELAKKAQY
Sbjct: 27 ASKKKGADPLFPSAPKNFRLGGDIQPKRDLSRFVRWPKNVRLQRQHKILTTRLKVPPSINQFTNTLDKNAATDLYKLLLKYQPESKAAKTQRLRDIAAGKEQVSAP-----PAVIKYGLNHVTSLIENKKAKMVCIAHDVTPIELVVFLPALCRKMDIPYCIVKGKARLGQLVHKKNAAVVALTQVNKEDKAKFDSLNTAFRAQFNDESTHRRKWGGGIMGLKTQKKLELRAKAVAAELAKKAQY 266
BLAST of mRNA_P-fluviatile_contig1.186.1 vs. uniprot
Match: F0Y2N8_AURAN (60S ribosomal protein L7a (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2N8_AURAN) HSP 1 Score: 315 bits (807), Expect = 8.330e-103 Identity = 169/255 (66.27%), Postives = 201/255 (78.82%), Query Frame = 1
Query: 34 AKKQVKKQVKSTPKKVA---DPLFPAKKKSFRIGRDIQPKVDLSRFVKWPRYIRLQRQRKILVQRLKVPPSINQFSHTLDKNQATELLKVLMKYQPEDKKAKQQRLREIAAAKEAGNEPAPSKAPKVIKFGLKHVTTLIEEQKASLVVIAHDVNPIELVVWLPALCRKMGIPYCIIKGKARLGTLVHQKNAAVIALTSVNKEDESKLSTLKANFKAQFNDGFQ--RKWGGGIMGLKTQRKLEKRQKAIEAELAKK 783
+KK+VKK + PKK A DPLF A ++FR+G DIQP DLSRFVKWPRY+RLQRQ+KIL QRLKVPP++NQF+ TLDKNQA EL K+LMKYQPEDK AK R++ +A AK AG KAP V+KFGLKHVT L+E +KA LV IA DV+PIELVVWLPALC+KM +PYCI+K K+RLGT+VHQK AAV LT+V KED+ L L++NFKA +ND RKWGGGIMGLKTQ KL KR+KA++AELAKK
Sbjct: 3 SKKEVKK---APPKKEAAKPDPLFQATPRNFRVGGDIQPTRDLSRFVKWPRYVRLQRQKKILQQRLKVPPALNQFATTLDKNQAAELFKLLMKYQPEDKAAKADRVKALAEAKAAGGAAPEGKAPTVVKFGLKHVTYLVENKKAKLVCIASDVDPIELVVWLPALCKKMDVPYCIVKNKSRLGTVVHQKTAAVCCLTTVKKEDQHSLDQLRSNFKAMYNDNVAHARKWGGGIMGLKTQAKLAKREKALQAELAKK 254
BLAST of mRNA_P-fluviatile_contig1.186.1 vs. uniprot
Match: A0A0P1B814_PLAHL (60S ribosomal protein L7a n=2 Tax=Peronosporaceae TaxID=4777 RepID=A0A0P1B814_PLAHL) HSP 1 Score: 315 bits (807), Expect = 1.170e-102 Identity = 172/248 (69.35%), Postives = 200/248 (80.65%), Query Frame = 1
Query: 55 QVKSTPKKVADPLFPAKKKSFRIGRDIQPKVDLSRFVKWPRYIRLQRQRKILVQRLKVPPSINQFSHTLDKNQATELLKVLMKYQPEDKKAKQQRLREIAAAKEAGNEPAPSKAPKVIKFGLKHVTTLIEEQKASLVVIAHDVNPIELVVWLPALCRKMGIPYCIIKGKARLGTLVHQKNAAVIALTSVNKEDESKLSTLKANFKAQFND--GFQRKWGGGIMGLKTQRKLEKRQKAIEAELAKKAQY 792
+V ST KK +PLF + K+FR G DIQPK DLSRFV+WPRY+RLQRQRKIL QRLKVPPSINQFS+T+DKN AT+L K+L+KYQPE K AK RLR IAA K+ P P V+KFGL HVT+LIE +KA LVVIAHDVNPIELVV+LPALCR+ IPYCI+KGKARLG LVHQKNAAV+ALT VNKED++K +L F+A+FN+ +RKWGGGIMGLKTQ+KLE R+KAI AE AKKAQY
Sbjct: 24 KVSSTSKK--NPLFASTPKNFRKGNDIQPKRDLSRFVRWPRYVRLQRQRKILYQRLKVPPSINQFSNTVDKNVATDLFKLLLKYQPETKAAKTLRLRNIAAGKQEATAP-----PAVVKFGLNHVTSLIENKKAKLVVIAHDVNPIELVVFLPALCRQFDIPYCIVKGKARLGQLVHQKNAAVVALTHVNKEDKAKFDSLSQVFRAKFNEDSATRRKWGGGIMGLKTQKKLELREKAIAAEAAKKAQY 264
BLAST of mRNA_P-fluviatile_contig1.186.1 vs. uniprot
Match: A0A3R7JAR0_9STRA (60S ribosomal protein L7a n=8 Tax=Peronosporaceae TaxID=4777 RepID=A0A3R7JAR0_9STRA) HSP 1 Score: 313 bits (803), Expect = 4.880e-102 Identity = 169/245 (68.98%), Postives = 198/245 (80.82%), Query Frame = 1
Query: 64 STPKKVADPLFPAKKKSFRIGRDIQPKVDLSRFVKWPRYIRLQRQRKILVQRLKVPPSINQFSHTLDKNQATELLKVLMKYQPEDKKAKQQRLREIAAAKEAGNEPAPSKAPKVIKFGLKHVTTLIEEQKASLVVIAHDVNPIELVVWLPALCRKMGIPYCIIKGKARLGTLVHQKNAAVIALTSVNKEDESKLSTLKANFKAQFNDG--FQRKWGGGIMGLKTQRKLEKRQKAIEAELAKKAQY 792
S PKK DPLF + K+FR G DIQPK DLSRFV+WPRY+RLQRQRKIL QRLKVPPS+NQFS+TLDKN AT+L K+L+KYQPE K AK RLR IAA KE + P P V+KFGL HVT+L+E +KA LVVIAHDV+PIELVV+LPALCR+ IPYCI+KGK+RLG LVHQKNAAV+ALT VNKED++K +L F A+FN+ +RKWGGGIMGLKTQ+KLE R+KA+ AE AKKAQY
Sbjct: 28 SKPKK--DPLFQSTPKNFRRGGDIQPKRDLSRFVRWPRYVRLQRQRKILYQRLKVPPSVNQFSNTLDKNVATDLFKLLLKYQPETKAAKTLRLRNIAAGKEEASAP-----PAVVKFGLNHVTSLVENKKAKLVVIAHDVDPIELVVFLPALCRQFDIPYCIVKGKSRLGQLVHQKNAAVVALTHVNKEDKAKFDSLSEAFHAKFNEDSTIRRKWGGGIMGLKTQKKLELREKAVAAEAAKKAQY 265
BLAST of mRNA_P-fluviatile_contig1.186.1 vs. uniprot
Match: K3WB90_GLOUD (60S ribosomal protein L7a n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WB90_GLOUD) HSP 1 Score: 313 bits (801), Expect = 1.120e-101 Identity = 170/243 (69.96%), Postives = 197/243 (81.07%), Query Frame = 1
Query: 70 PKKVADPLFPAKKKSFRIGRDIQPKVDLSRFVKWPRYIRLQRQRKILVQRLKVPPSINQFSHTLDKNQATELLKVLMKYQPEDKKAKQQRLREIAAAKEAGNEPAPSKAPKVIKFGLKHVTTLIEEQKASLVVIAHDVNPIELVVWLPALCRKMGIPYCIIKGKARLGTLVHQKNAAVIALTSVNKEDESKLSTLKANFKAQFNDGF--QRKWGGGIMGLKTQRKLEKRQKAIEAELAKKAQY 792
PKK DPLF + K+FR+G DIQPK DLSRFV+WPRY+R+QRQRKIL QRLKVPPSINQF++T+DKN A +L K+L+KYQPE K AK RLR IAA KE + P P VIK+GL HVT+LIE +KA LVVIAHDVNPIELVV+LPALCRK IPY I+KGKARLG LVH+KNAAV+ALT VNKED+SK +L + FK +FND +RKWGGGIMGLKTQ+KLE R+KAI AE AKKAQY
Sbjct: 34 PKK--DPLFQSAPKNFRLGGDIQPKRDLSRFVRWPRYVRIQRQRKILYQRLKVPPSINQFTNTIDKNTAADLFKLLLKYQPETKAAKTLRLRNIAAGKEEASAP-----PAVIKYGLNHVTSLIENKKAKLVVIAHDVNPIELVVFLPALCRKFDIPYTIVKGKARLGQLVHKKNAAVVALTHVNKEDKSKFDSLASAFKTKFNDDSTTRRKWGGGIMGLKTQKKLELREKAIAAEAAKKAQY 269
BLAST of mRNA_P-fluviatile_contig1.186.1 vs. uniprot
Match: A0A7S3HBR5_9STRA (60S ribosomal protein L7a n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HBR5_9STRA) HSP 1 Score: 311 bits (796), Expect = 4.380e-101 Identity = 161/237 (67.93%), Postives = 191/237 (80.59%), Query Frame = 1
Query: 82 ADPLFPAKKKSFRIGRDIQPK-VDLSRFVKWPRYIRLQRQRKILVQRLKVPPSINQFSHTLDKNQATELLKVLMKYQPEDKKAKQQRLREIAAAKEAGNEPAPSKAPKVIKFGLKHVTTLIEEQKASLVVIAHDVNPIELVVWLPALCRKMGIPYCIIKGKARLGTLVHQKNAAVIALTSVNKEDESKLSTLKANFKAQFNDGFQRKWGGGIMGLKTQRKLEKRQKAIEAELAKKAQ 789
A+PLFP+ KSFRIG D++ K DLSR+V+WPRY+R+QRQ+KIL+QRLKVPPSINQF TLDKNQA+EL K+L+KYQPE K AK RL +A A A P +KFGLKHVTTLIE++KA LVVI HDV+PIELV+WLPALCRKM +P+ I+KGK+RLGTL H+K +V+ LTSVNKEDESKL TL NFKAQFND +RKWGGGIMGLKTQ KL+KR KA+E E AKKA+
Sbjct: 19 ANPLFPSTPKSFRIGGDLRLKGKDLSRYVRWPRYVRIQRQKKILLQRLKVPPSINQFQRTLDKNQASELFKLLVKYQPETKAAKTTRLEALAQATAAKESTPSGPPPATLKFGLKHVTTLIEQKKAKLVVIPHDVDPIELVLWLPALCRKMNVPFAIVKGKSRLGTLTHKKTCSVVCLTSVNKEDESKLKTLGENFKAQFNDNVERKWGGGIMGLKTQAKLDKRAKALEVEEAKKAE 255
BLAST of mRNA_P-fluviatile_contig1.186.1 vs. uniprot
Match: A0A6G0X5U8_9STRA (60S ribosomal protein L7a n=8 Tax=Aphanomyces TaxID=100860 RepID=A0A6G0X5U8_9STRA) HSP 1 Score: 311 bits (796), Expect = 6.160e-101 Identity = 165/245 (67.35%), Postives = 198/245 (80.82%), Query Frame = 1
Query: 64 STPKKVADPLFPAKKKSFRIGRDIQPKVDLSRFVKWPRYIRLQRQRKILVQRLKVPPSINQFSHTLDKNQATELLKVLMKYQPEDKKAKQQRLREIAAAKEAGNEPAPSKAPKVIKFGLKHVTTLIEEQKASLVVIAHDVNPIELVVWLPALCRKMGIPYCIIKGKARLGTLVHQKNAAVIALTSVNKEDESKLSTLKANFKAQFNDG--FQRKWGGGIMGLKTQRKLEKRQKAIEAELAKKAQY 792
++ KK ADPLFP+ ++FR+G +IQPK DLSRFV+WP+ +RLQRQ KIL RLKVPPS+NQF++TLDKN A +LLK+L+KYQPE K AKQQRL++IAA KE P P VIK+GL HVT+LIE +KA LVVIAHDV P+ELVV+LPALCRKM IPY I KGKARLG LVH+KNAAV+ALT VNKED++K +L F+ QFND +RKWGGGIMGLKTQ+KLE R+KA+ AE AKKAQY
Sbjct: 29 ASKKKAADPLFPSTPRNFRLGGNIQPKRDLSRFVRWPKNVRLQRQAKILQTRLKVPPSVNQFTNTLDKNHAVDLLKLLLKYQPETKAAKQQRLKDIAAGKEQAAAP-----PAVIKYGLNHVTSLIENKKAKLVVIAHDVTPLELVVFLPALCRKMDIPYAIFKGKARLGQLVHKKNAAVVALTQVNKEDKAKFDSLATAFRGQFNDETTHRRKWGGGIMGLKTQKKLELREKAVAAEAAKKAQY 268
BLAST of mRNA_P-fluviatile_contig1.186.1 vs. uniprot
Match: A0A7S0LF41_9EUKA (60S ribosomal protein L7a n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LF41_9EUKA) HSP 1 Score: 309 bits (791), Expect = 2.580e-100 Identity = 162/256 (63.28%), Postives = 198/256 (77.34%), Query Frame = 1
Query: 25 MGVAKKQVKKQVKSTPKKVADPLFPAKKKSFRIGRDIQPKV-DLSRFVKWPRYIRLQRQRKILVQRLKVPPSINQFSHTLDKNQATELLKVLMKYQPEDKKAKQQRLREIAAAKEAGNEPAPSKAPKVIKFGLKHVTTLIEEQKASLVVIAHDVNPIELVVWLPALCRKMGIPYCIIKGKARLGTLVHQKNAAVIALTSVNKEDESKLSTLKANFKAQFNDGFQRKWGGGIMGLKTQRKLEKRQKAIEAELAKKAQ 789
M KK KS VA+PLF +K KSFRIG D++ K DLSR+V+WPRY+R+QRQ+K+L+QRLKVPPSINQF TLDKNQA+EL K+L+KYQPE K AK RL +A A A P +K+GLKHVTTLIE++KA LV+I+HDV+PIELV+WLPALCRKM +P+CI+KGK+RLGTL H+K +V+ALT+VN EDESKL TL N + QFN+ +RKWGGGIMGLKTQ KL KR +AIEAELAKKA+
Sbjct: 1 MAPTKKVAAPAKKSKTATVANPLFQSKPKSFRIGGDLRLKGRDLSRYVRWPRYVRIQRQKKVLLQRLKVPPSINQFRRTLDKNQASELFKLLVKYQPETKAAKATRLETLAKATAAKENTTSGPPPATLKYGLKHVTTLIEQKKAKLVIISHDVDPIELVLWLPALCRKMNVPFCIVKGKSRLGTLTHKKTCSVVALTAVNNEDESKLKTLAENCRVQFNENVERKWGGGIMGLKTQAKLTKRAQAIEAELAKKAE 256 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.186.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig1.186.1 >prot_P-fluviatile_contig1.186.1 ID=prot_P-fluviatile_contig1.186.1|Name=mRNA_P-fluviatile_contig1.186.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=257bp MGVAKKQVKKQVKSTPKKVADPLFPAKKKSFRIGRDIQPKVDLSRFVKWPback to top mRNA from alignment at P-fluviatile_contig1:2371559..2376763- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig1.186.1 ID=mRNA_P-fluviatile_contig1.186.1|Name=mRNA_P-fluviatile_contig1.186.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5205bp|location=Sequence derived from alignment at P-fluviatile_contig1:2371559..2376763- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig1:2371559..2376763- >mRNA_P-fluviatile_contig1.186.1 ID=mRNA_P-fluviatile_contig1.186.1|Name=mRNA_P-fluviatile_contig1.186.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1542bp|location=Sequence derived from alignment at P-fluviatile_contig1:2371559..2376763- (Porterinema fluviatile SAG_2381)back to top |