mRNA_P-fluviatile_contig1.180.1 (mRNA) Porterinema fluviatile SAG_2381
|
Overview
Homology
BLAST of mRNA_P-fluviatile_contig1.180.1 vs. uniprot
Match: D8LN60_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN60_ECTSI) HSP 1 Score: 134 bits (338), Expect = 7.760e-29 Identity = 183/551 (33.21%), Postives = 237/551 (43.01%), Query Frame = 1
Query: 730 AATCLQRIARGRRLRRVFQDVVRPALHIYMSVGKQRRPRHGEIGRRALLLARFGLIRAAHVRLRQAILSTPMPIHVHEPGENNRCCRLEPAGAPCRGGYTAAALPSTGGATEAKPSPSRSTIAPQTGSEKTLRGVDTPSAAGGGGIGRDQESGKLAM--DTGDAGEPEPRRAPLR-REDGRRSYGSSNGAANQARWREEQLLLWALTEAAARVVQDVMRAFARRRRSLSEIGPRLFTAPTGDVTSVDDGDFCGDSGLVGANGEGGEGSGCKPDLEG-LPWPIGAGLLFPGPAAAAAAVSLALSTTGARTV----------TTKTMTTE-------------------------ASPMEKTSNGTSSISSSYPNSSAAMPPTSSDRSPPAA-----------------------------TP------VRSSHRRFPTTAGICV-------------TQQCRDGALA-EPGFDHQEGGASGWPLDVGEKAVGNSLVRGVPAQWPLLPSEERKKRRNEIHLRRNRSRARHTERALATLEYQGNMVLPEIVRMQ 2118
AA CLQR ARGR RRVF+++VRPALHIY++ G + G RRA+LL+R I A+ LR + P ++ +R A P G + AA+ ST G A PS S + ++ + DT G D G+ A + ++G+ P R P +D RR SS A QA RE ++LWAL +AAARVVQ+ MR FARR+R L L + GD VG G G +P++ G LPW I AG+ P +A+ + S A TTG T+ T KTMT + +SP SN T+ + S SS A P T++ PA+ +P V + R P TAG V TQ G A E + +E G P D G +WP+LPSEERKKR NE HLRRN+SR T R LA LE QGN VLPEI+RMQ
Sbjct: 2 AAVCLQRHARGRPQRRVFRELVRPALHIYVAQGPPQISPFGIGDRRAILLSRLMAILDAYNGLRGLV---PTLSNLTCRSRKHRRRNRAAASPPLFG--SDAAMTSTDGVV-ALPSSSHPAAKTEVVVQRAIVSDDTERPD----QGPDSREGEDAASAEAPNSGKCTPGRTPKGGAQDARRGNNSSEAA--QAAEREATIVLWALRDAAARVVQEEMRCFARRKRWL------LVGTGQRQREPEEHGDEGRSKSTVGVESPTGTGVVYQPEVAGGLPWAIAAGVSPIAPPSASFSSSSARGTTGRTTMAGTPSATGGSTGKTMTADTRRSSVTGTTMGENKSRSADDSWASSSPTPNRSNHTACSTVSSARSSPATPRTTTAAGTPASGGYTGRXXXXXXXXXXSATRRTKDSACGESPETYSVLVSPTTSRSPHTAGSAVSTPWSFQQSARTRTQGDSTGDPAPELAWTWEEERGEGEPPDEKNAWTNARRTTGRAVRWPILPSEERKKRENEAHLRRNKSRLGVTLRGLANLECQGNFVLPEIIRMQ 534
BLAST of mRNA_P-fluviatile_contig1.180.1 vs. uniprot
Match: A0A6H5KNB2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNB2_9PHAE) HSP 1 Score: 88.2 bits (217), Expect = 3.370e-14 Identity = 128/402 (31.84%), Postives = 162/402 (40.30%), Query Frame = 1
Query: 1171 RDQESGKLAMDTGDAGEPEPRRAPLRREDGRRSYGSSNGAANQARWREEQLLLWALTEAAARVVQDVMRAFARRRR-SLSEIGPRLFTAPTGDVTSVDDGDFCGDSGLVGANGEGGEGSGCKPDLEG-LPWPIGAGLLFPGPAAAAAAVSLALSTTGARTVT------------TKTMTTEASPMEKTSNGTS---------SISSSYPN--------------SSAAMPPTSSDRSPPAA-----------------------------------TPVRSSHRRFPTTAGICV-------------TQQCRDGALA-EPGFDHQEGGASGWPLDVGEKAVGNSLVRGVPAQWPLLPSEERKKRRNEIHLRRNRSRARHTERALATLEYQGNMVLPEIVRMQ 2118
R+ E G A+ ++GE P R R S+ AA+ A RE ++LWAL +AAARVVQ+ MR FARR+R L G R G+ GD VG G G +P++ G LPW I AG+ P++A+ + S A TTG T+ T T T +P +T+ G + + SS PN SS A P T++ PA+ R P TAG V TQ G A E + +E G P D A+WP LPSEERKKR NE HLRRN+SR T R A LE QGN VLPEI+RMQ
Sbjct: 88 REGEDGASAV-APNSGECTPDRTAKGGTQDTRGNNKSSEAAHAAE-REMTIVLWALRDAAARVVQEEMRCFARRKRWLLFRTGQRQREPGEGEH-----GDEGRSMSTVGVESPTGTGVVYRPEVAGGLPWAIAAGVSPIAPSSASFSSSSARVTTGRTTMAGTSSATGGSTGITMTADTRRNPATRTTMGENKRKSADESWASSSPTPNRSTHTACLTVSSVRSSRATPRTTTAAGTPASGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRSPHTAGSAVSTPWTFQQSTRTRTQGISKGDPAPELAWTWEEERGEGEPPDEEHTWTDARRTTSRAARWPKLPSEERKKRENEAHLRRNKSRLGVTLRGFANLECQGNFVLPEIIRMQ 482 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.180.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig1.180.1 >prot_P-fluviatile_contig1.180.1 ID=prot_P-fluviatile_contig1.180.1|Name=mRNA_P-fluviatile_contig1.180.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=707bp FQLPASLRAVESAADAFEISARRVGSRVYGNPGGLTVSERYILAEKREAHback to top mRNA from alignment at P-fluviatile_contig1:2290052..2295317+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig1.180.1 ID=mRNA_P-fluviatile_contig1.180.1|Name=mRNA_P-fluviatile_contig1.180.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5266bp|location=Sequence derived from alignment at P-fluviatile_contig1:2290052..2295317+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig1:2290052..2295317+ >mRNA_P-fluviatile_contig1.180.1 ID=mRNA_P-fluviatile_contig1.180.1|Name=mRNA_P-fluviatile_contig1.180.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=4242bp|location=Sequence derived from alignment at P-fluviatile_contig1:2290052..2295317+ (Porterinema fluviatile SAG_2381)back to top |