mRNA_P-fluviatile_contig1.171.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig1.171.1
Unique NamemRNA_P-fluviatile_contig1.171.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig1.171.1 vs. uniprot
Match: D8LN64_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LN64_ECTSI)

HSP 1 Score: 472 bits (1215), Expect = 6.050e-163
Identity = 224/269 (83.27%), Postives = 248/269 (92.19%), Query Frame = 1 
Query:    4 QRSHVTTMAATVVGGGRIGSALYEMGGGEDTLVGRADVIPEGDGPIYVCTRNDDLEDVILRTPPARREDLVFLQNGVLGPLLAKHGLVKNTQALIYFAVSKKGEPPIDGVTDANPDGLTSTCGKWAGEFKQRLARGGLTCHEVPEDRYKARMYEKHIWICAFMVAGAAYKCTVGEVEANHAEEVRALISELQAAIEGKYGVVFEDGVKERLCAYTRSVAHYPAAVKEFSWRNGFFWDMSETAKKEGKEDPCPLHTKLLREVADEQGLSL 810
            QR   TTMAA +VGGGRIG ALY+MGGG DTLVGR D+IP+GDGPIYVCTRNDDLEDVI RTPPARREDLVFLQNGVLGPLL KHGL KNTQALIYFAVSKKGEPPIDG+TDANP+GLTSTCGKWAGE K+RLA+GGLTCHE+ EDRY ARMYEKHIWICAFMVAGAA+KC +G+V+A+HA+EVR LI ELQ AIE +YGV FEDGVK+RLCAY+RSVA+YPAAVKEFSWRNGFFWD+SE A+KEG EDPCPLHTKLLR+VA+EQGL+L
Sbjct:   48 QRPTATTMAA-IVGGGRIGCALYDMGGGGDTLVGRGDIIPDGDGPIYVCTRNDDLEDVISRTPPARREDLVFLQNGVLGPLLEKHGLAKNTQALIYFAVSKKGEPPIDGITDANPEGLTSTCGKWAGELKERLAKGGLTCHELAEDRYTARMYEKHIWICAFMVAGAAHKCNMGQVDADHADEVRTLIGELQKAIEVEYGVAFEDGVKDRLCAYSRSVANYPAAVKEFSWRNGFFWDISEKARKEGTEDPCPLHTKLLRQVANEQGLTL 315
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BLAST of mRNA_P-fluviatile_contig1.171.1 vs. uniprot
Match: A0A835YGX2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGX2_9STRA)

HSP 1 Score: 352 bits (904), Expect = 1.160e-116
Identity = 164/249 (65.86%), Postives = 197/249 (79.12%), Query Frame = 1 
Query:   37 VVGGGRIGSALYEMGGGEDTLVGRADVIPEGDGPIYVCTRNDDLEDVILRTPPARREDLVFLQNGVLGPLLAKHGLVKNTQALIYFAVSKKGEPPIDGVTDANPDGLTSTCGKWAGEFKQRLARGGLTCHEVPEDRYKARMYEKHIWICAFMVAGAAYKCTVGEVEANHAEEVRALISELQAAIEGKYGVVFEDGVKERLCAYTRSVAHYPAAVKEFSWRNGFFWDMSETAKKEGKEDPCPLHTKLLRE 783
            +VG GRIG+ALYEMG G DTLVGR+  IP+G GPIYVCTRNDDLE+VILRTPP+RR+DLVFLQNG+LGP LAKHGL  N+QALIYFAV+K+GE PIDGVTD NP+GLT+  GKWA  FK+RL+ GGL+CH +    + A+ +EKHIWICAFM+ G  +  +VGEVE+ H EEVR LI EL AA   KYG  F  G  +RLCAY RSVAHYP AVKE++WRNGF+W +S+ A   G+ DP PLHT +LR+
Sbjct:    4 IVGKGRIGNALYEMGDGTDTLVGRSTTIPDGQGPIYVCTRNDDLENVILRTPPSRRDDLVFLQNGILGPFLAKHGLSNNSQALIYFAVAKQGEKPIDGVTDVNPEGLTAATGKWAPAFKERLSTGGLSCHILNTTEFTAQSFEKHIWICAFMLVGVKHGASVGEVESTHGEEVRRLIDELLAATAAKYGARFRAGAPDRLCAYARSVAHYPTAVKEWAWRNGFYWALSKEALAAGRPDPTPLHTAMLRQ 252
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BLAST of mRNA_P-fluviatile_contig1.171.1 vs. uniprot
Match: A0A0G4FX93_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FX93_VITBC)

HSP 1 Score: 305 bits (782), Expect = 3.400e-98
Identity = 149/251 (59.36%), Postives = 184/251 (73.31%), Query Frame = 1 
Query:   37 VVGGGRIGSALYEMGGGEDTLVGRADVIP-EGDGPIYVCTRNDDLEDVILRTPPARREDLVFLQNGVLGPLLAKHGLVKNTQALIYFAVSKKGEPPIDGVTDANPDGLTSTCGKWAGEFKQRLARGGLTCHEVPEDRYKARMYEKHIWICAFMVAGAAYKCTVGEVEANHAEEVRALISELQAAIEGKYGVVFEDGVKERLCAYTRSVAHYPAAVKEFSWRNGFFWDMSETAKKEGKEDPCPLHTKLLREV 786
            +VG GRIGS LYE+GG    LVGR D IP + +GPIYVCTRND L  +I +TP +RREDLVFLQNG+L P L  + L  NT  LIYFAV+K GEPPIDG TD NP+GLT+  GKWA +F   L  G L+C  + +  ++A MYEK IWI AFM+ G  Y  TVGEVE +H +EV  LI EL+ A EG  G+ F+DG+ ERLC+YTRSV+H+P AVKEF WRNGFFWD+S+ A   G+ DPCP+HT+LL++V
Sbjct:    8 IVGRGRIGSLLYELGGRSGVLVGRDDPIPADVEGPIYVCTRNDALASIIDKTPASRREDLVFLQNGMLEPFLQSYALQDNTMGLIYFAVAKLGEPPIDGKTDVNPEGLTAVNGKWANDFAALLRNGQLSCKVLEKAVFRASMYEKLIWIAAFMLVGTKYGVTVGEVEQSHRQEVTELIGELKRASEG-LGITFQDGMVERLCSYTRSVSHFPTAVKEFEWRNGFFWDLSKQAMDGGRADPCPIHTRLLQQV 257
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BLAST of mRNA_P-fluviatile_contig1.171.1 vs. uniprot
Match: W7U5Z5_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U5Z5_9STRA)

HSP 1 Score: 299 bits (766), Expect = 3.100e-95
Identity = 150/267 (56.18%), Postives = 194/267 (72.66%), Query Frame = 1 
Query:    1 AQRSHVTTMAAT---VVGGGRIGSALYEMGGGEDTLVGRADVIP-EGDGPIYVCTRNDDLEDVILRTPPARREDLVFLQNGVLGPLLAKHGLVKNTQALIYFAVSKKGEPPIDGVTDANPDGLTSTCGKWAGEFKQRLARGGLTCHEVPEDRYKARMYEKHIWICAFMVAGAAYK-CTVGEVEANHAEEVRALISELQAAIEGKYGVVFEDGVKERLCAYTRSVAHYPAAVKEFSWRNGFFWDMSETAKKEGKEDPCPLHTKLLREV 786
            A+ S V   A T   VVG GR+G AL +M G    +VGR D +P EG GPIYV TRNDDL  V+ +TP ARR+DLVFLQNG+LGP L  +GL  NTQAL+YFAV++KG+ P DGVTD NP+GLT+  G+WA +F++ L + GL CH + + R++A M+EK +WI AFM+ G+ +   TVGEVE +H E+V ALI EL+ A+E    V F+DGV++RLCAY RSVAH+P AVKEF WRNGFFW +SE A   G+ DPCP H+ +L++V
Sbjct:   34 ARESTVLMTATTQHVVVGKGRVGEALGKMLGSSTVMVGRNDPVPIEGTGPIYVATRNDDLAAVVEKTPEARRKDLVFLQNGMLGPFLKTYGLEDNTQALVYFAVARKGDVPTDGVTDLNPNGLTAVYGEWATDFEETLTKAGLKCHILDKGRFQAAMFEKLMWISAFMLVGSVHGGITVGEVEKSHREDVVALIQELKKALERHAKVTFQDGVEDRLCAYARSVAHFPTAVKEFPWRNGFFWKLSEEAVGRGEADPCPSHSAMLKQV 300
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BLAST of mRNA_P-fluviatile_contig1.171.1 vs. uniprot
Match: R1G2T3_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1G2T3_EMIHU)

HSP 1 Score: 292 bits (747), Expect = 7.680e-93
Identity = 149/253 (58.89%), Postives = 176/253 (69.57%), Query Frame = 1 
Query:   37 VVGGGRIGSALYEMGGGEDTLVGRADVIPEG--DGPIYVCTRNDDLEDVILRTPPARREDLVFLQNGVLGPLLAKHGLVKNTQALIYFAVSKKGEPPIDGVTDANPDGLTSTCGKWAGEFKQRLARGGLTCHEVPEDRYKARMYEKHIWICAFMVAGAAYK-CTVGEVEANHAEEVRALISELQAAIEGKYGVVFEDGVKERLCAYTRSVAHYPAAVKEFSWRNGFFWDMSETAKKEGKEDPCPLHTKLLREV 786
            +VGGGRIGSAL E+G   D ++ R D  P     GPIYV TRNDDL  V+  TPP RR+DLVFLQNG+LG  L + GL   TQ L+Y AV+K GEPPIDG+TD NPDGLT+  G+WA  F+ RLA GGLTCH    D Y   M EKH+WICAFMV GA +   TVGEVE+ HA ++RAL+ EL AA E   GV  E G  ERL AY RSVAH+P AVKEF WRNG+F  +S+ A  EG+ DP PLHT  L+E+
Sbjct:   10 IVGGGRIGSALKELGVEGDVVLRRGDAFPAAPASGPIYVTTRNDDLAGVVAATPPERRQDLVFLQNGMLGEFLEEQGLPDATQVLLYLAVAKLGEPPIDGITDTNPDGLTTAKGRWAEAFRARLAGGGLTCHVKQGDEYTKAMLEKHVWICAFMVTGALHGGVTVGEVESAHASQLRALVDELCAAGEAALGVRLEPGAFERLAAYGRSVAHFPTAVKEFEWRNGWFHKISQRALAEGRPDPLPLHTAALQEL 262
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BLAST of mRNA_P-fluviatile_contig1.171.1 vs. uniprot
Match: A0A4D9D7H8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D7H8_9STRA)

HSP 1 Score: 288 bits (736), Expect = 1.030e-91
Identity = 136/232 (58.62%), Postives = 178/232 (76.72%), Query Frame = 1 
Query:   97 LVGRADVIP-EGDGPIYVCTRNDDLEDVILRTPPARREDLVFLQNGVLGPLLAKHGLVKNTQALIYFAVSKKGEPPIDGVTDANPDGLTSTCGKWAGEFKQRLARGGLTCHEVPEDRYKARMYEKHIWICAFMVAGAAYK-CTVGEVEANHAEEVRALISELQAAIEGKYGVVFEDGVKERLCAYTRSVAHYPAAVKEFSWRNGFFWDMSETAKKEGKEDPCPLHTKLLREV 786
            +VGR D +P EG GPIYV TRNDDL  V+ +TP ARR+DLVFLQNG+LGP L K+GL  NTQAL+YFAV++KG+ P DGVTD NP+GLT+  G+WA +F++ L + GL CH + + R++A M+EK +WI AFM+ G+ +   TVGEVE +H E+V ALI EL+ A+E    V F+DGV++RLCAY RSVAH+P AVKEF WRNGFFW++SE A   G+ DPCP H+ +L++V
Sbjct:    1 MVGRNDPVPVEGTGPIYVATRNDDLAAVVEKTPEARRKDLVFLQNGMLGPFLKKYGLEDNTQALVYFAVARKGDVPTDGVTDLNPNGLTAVYGEWAADFEETLTKAGLKCHMLDKGRFQAAMFEKLMWISAFMLVGSVHGGITVGEVEKSHREDVVALIQELKKALERHAKVTFQDGVEDRLCAYARSVAHFPTAVKEFPWRNGFFWNLSEEAVGRGEADPCPSHSAMLKQV 232
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BLAST of mRNA_P-fluviatile_contig1.171.1 vs. uniprot
Match: UPI00053C73E1 (uncharacterized protein LOC104812426 n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C73E1)

HSP 1 Score: 288 bits (736), Expect = 1.210e-90
Identity = 143/254 (56.30%), Postives = 181/254 (71.26%), Query Frame = 1 
Query:   31 ATVVGGGRIGSALYEMGGGEDTLVGRADVIP-EGDGPIYVCTRNDDLEDVILRTPPARREDLVFLQNGVLGPLLAKHGLVKNTQALIYFAVSKKGEPPIDGVTDANPDGLTSTCGKWAGEFKQRLARGGLTCHEVPEDRYKARMYEKHIWICAFMVAGAAYK-CTVGEVEANHAEEVRALISELQAAIEGKYGVVFEDGVKERLCAYTRSVAHYPAAVKEFSWRNGFFWDMSETAKKEGKEDPCPLHTKLLREV 786
            A +VGGGR+G AL EMG G D LV R + +P + DGPI VCTRNDDL+ V+  TP +R +DL+F QNG+L P     GL +  Q L YFAVSK GEPPIDG TD NP+GLT++ GKWA     RL  GGL+C  + ++ ++ +M EK IWICAFM+ GA +   TVG VE  + +EV +LI EL AA E   G+ FEDG+ ERLCAY+R+VAH+P AVKEF WRNG+F+ +SE A  EGK DPCPLHT+ L+E+
Sbjct:   53 AVIVGGGRVGRALQEMGSGHDLLVKRGESVPLDFDGPILVCTRNDDLDAVLDSTPQSRWKDLIFFQNGMLEPWFESKGLGEADQVLAYFAVSKLGEPPIDGKTDTNPEGLTASYGKWASAVAARLHSGGLSCKVLDKEAFQKQMLEKLIWICAFMLVGARHPGATVGAVEKEYRDEVSSLIQELAAAAEAAKGLSFEDGMVERLCAYSRAVAHFPTAVKEFKWRNGWFYSLSEKAIAEGKPDPCPLHTEWLKEL 306
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BLAST of mRNA_P-fluviatile_contig1.171.1 vs. uniprot
Match: S8CQ16_9LAMI (Uncharacterized protein n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8CQ16_9LAMI)

HSP 1 Score: 286 bits (731), Expect = 4.040e-90
Identity = 138/254 (54.33%), Postives = 182/254 (71.65%), Query Frame = 1 
Query:   31 ATVVGGGRIGSALYEMGGGEDTLVGRADVIP-EGDGPIYVCTRNDDLEDVILRTPPARREDLVFLQNGVLGPLLAKHGLVKNTQALIYFAVSKKGEPPIDGVTDANPDGLTSTCGKWAGEFKQRLARGGLTCHEVPEDRYKARMYEKHIWICAFMVAGAAYK-CTVGEVEANHAEEVRALISELQAAIEGKYGVVFEDGVKERLCAYTRSVAHYPAAVKEFSWRNGFFWDMSETAKKEGKEDPCPLHTKLLREV 786
            A +VGGGR+G AL +MGGG+D L+GR + +P +  GPI+VCTRN DL+ V+  TP +R  DLVF QNG+L P     GLV   Q L YFAVSK GEPP+DG+TD NPDGLTS  GKWA     RL   GL+C  + ++ ++ +M EK IWIC+FM+ GA +   TVG VE ++  +V ALI+EL +A   + GV FE+G++ERLCAY+R+V+H+P AVKEF WRNG+F+ +SE A   G+EDPCPLHT  L+E+
Sbjct:   37 AVIVGGGRVGRALRDMGGGDDVLIGRGESVPVDFAGPIFVCTRNRDLDAVLDSTPESRWSDLVFFQNGMLDPWFDSKGLVNAGQVLAYFAVSKPGEPPVDGITDTNPDGLTSAYGKWASAVSSRLRSSGLSCKTLEKEPFQKQMLEKLIWICSFMLVGAIHSGVTVGAVEKDYHSQVCALIAELASAAAAEKGVEFEEGMQERLCAYSRAVSHFPTAVKEFEWRNGWFYSLSEKAVARGEEDPCPLHTAWLKEL 290
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BLAST of mRNA_P-fluviatile_contig1.171.1 vs. uniprot
Match: A0A2Z7CB08_9LAMI (Uncharacterized protein n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7CB08_9LAMI)

HSP 1 Score: 283 bits (724), Expect = 1.860e-89
Identity = 140/258 (54.26%), Postives = 180/258 (69.77%), Query Frame = 1 
Query:   19 TTMAATVVGGGRIGSALYEMGGGEDTLVGRADVIPEG-DGPIYVCTRNDDLEDVILRTPPARREDLVFLQNGVLGPLLAKHGLVKNTQALIYFAVSKKGEPPIDGVTDANPDGLTSTCGKWAGEFKQRLARGGLTCHEVPEDRYKARMYEKHIWICAFMVAGAAYK-CTVGEVEANHAEEVRALISELQAAIEGKYGVVFEDGVKERLCAYTRSVAHYPAAVKEFSWRNGFFWDMSETAKKEGKEDPCPLHTKLLREV 786
            T + A +VGGGR+G AL++MG GED L+ R +  P     PI VCTRNDDLE V+  TP +R  DLVF QNG+L P     GL    Q L YFAVSK GEPP+DG+TDANP+GLT+  GKWA     RL   GL+C  + +D ++ +M EK IWICAFM+ GA +   TVG VE  +  EV ALISEL AA   + G+VFE+ +++RLCAY+R+V+H+P AVKEF WRNG+F+ ++E A  EGK+DPCPLHT  L+E+
Sbjct:    6 TVVPAVIVGGGRVGRALHDMGSGEDVLIKRGESFPHDFKVPILVCTRNDDLEAVLHSTPKSRWSDLVFFQNGMLEPWFENKGLGNADQVLAYFAVSKLGEPPVDGITDANPEGLTAVYGKWASAVAARLRARGLSCKVLDKDAFQKQMLEKLIWICAFMLVGARHPGATVGAVEKEYRSEVSALISELAAAAAEEKGIVFEEAMEDRLCAYSRAVSHFPTAVKEFKWRNGWFYSLTEKAIAEGKQDPCPLHTTWLQEL 263
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BLAST of mRNA_P-fluviatile_contig1.171.1 vs. uniprot
Match: A0A6J0MDZ3_RAPSA (uncharacterized protein LOC108842271 n=8 Tax=Brassicaceae TaxID=3700 RepID=A0A6J0MDZ3_RAPSA)

HSP 1 Score: 285 bits (728), Expect = 1.980e-89
Identity = 138/254 (54.33%), Postives = 181/254 (71.26%), Query Frame = 1 
Query:   31 ATVVGGGRIGSALYEMGGGEDTLVGRADVIP-EGDGPIYVCTRNDDLEDVILRTPPARREDLVFLQNGVLGPLLAKHGLVKNTQALIYFAVSKKGEPPIDGVTDANPDGLTSTCGKWAGEFKQRLARGGLTCHEVPEDRYKARMYEKHIWICAFMVAGAAYK-CTVGEVEANHAEEVRALISELQAAIEGKYGVVFEDGVKERLCAYTRSVAHYPAAVKEFSWRNGFFWDMSETAKKEGKEDPCPLHTKLLREV 786
            A +VGGGR+G AL EMG G+D LV R + +P + +GPI VCTRNDDL+ V+  TP +R +DLVF QNG++ P     GL    Q L YFAVSK GEPP+DG+TD NP+GLT+  GKWA +   RL  GGL+C  + ++ ++ +M EK IWICAFM+ GA +   +VG VE  + +EV  LI EL AA   + G+ FED + ERLCAY+R+VAH+P AVKEF WRNG+F+ +S+ A +EGK DPCPLHT+ LRE+
Sbjct:   54 AVIVGGGRVGQALQEMGSGDDVLVKRGEPVPVDFEGPILVCTRNDDLDAVLEATPQSRWKDLVFFQNGMMEPWFESKGLGDADQVLAYFAVSKLGEPPVDGITDTNPEGLTAAYGKWASDVAARLQSGGLSCKVLDKESFQKQMLEKLIWICAFMLVGARHPGASVGMVEKEYRDEVARLIQELAAAAAAEKGLTFEDNMVERLCAYSRAVAHFPTAVKEFKWRNGWFYSLSQKAIEEGKPDPCPLHTEWLREL 307
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.171.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LN64_ECTSI6.050e-16383.27Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YGX2_9STRA1.160e-11665.86Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A0G4FX93_VITBC3.400e-9859.36Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
W7U5Z5_9STRA3.100e-9556.18Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
R1G2T3_EMIHU7.680e-9358.89Hypothetical protein n=1 Tax=Emiliania huxleyi Tax... [more]
A0A4D9D7H8_9STRA1.030e-9158.62Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
UPI00053C73E11.210e-9056.30uncharacterized protein LOC104812426 n=1 Tax=Taren... [more]
S8CQ16_9LAMI4.040e-9054.33Uncharacterized protein n=1 Tax=Genlisea aurea Tax... [more]
A0A2Z7CB08_9LAMI1.860e-8954.26Uncharacterized protein n=1 Tax=Dorcoceras hygrome... [more]
A0A6J0MDZ3_RAPSA1.980e-8954.33uncharacterized protein LOC108842271 n=8 Tax=Brass... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:2215663..2221040 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score468.4
Seed ortholog evalue2.2e-129
Seed eggNOG ortholog2880.D8LN64
EggNOG OGs28JH7@1,2QRWE@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-05_003670.1
Exons7
Model size1471
Cds size789
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815299.8254037-UTR-P-fluviatile_contig1:2215662..22163201622815299.8254037-UTR-P-fluviatile_contig1:2215662..2216320Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 2215663..2216320 -
1693561442.218014-UTR-P-fluviatile_contig1:2215662..22163201693561442.218014-UTR-P-fluviatile_contig1:2215662..2216320Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 2215663..2216320 -
1622815299.9084272-UTR-P-fluviatile_contig1:2221016..22210401622815299.9084272-UTR-P-fluviatile_contig1:2221016..2221040Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 2221017..2221040 -
1693561442.615549-UTR-P-fluviatile_contig1:2221016..22210401693561442.615549-UTR-P-fluviatile_contig1:2221016..2221040Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 2221017..2221040 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815299.8372416-CDS-P-fluviatile_contig1:2216320..22164831622815299.8372416-CDS-P-fluviatile_contig1:2216320..2216483Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2216321..2216483 -
1693561442.2293568-CDS-P-fluviatile_contig1:2216320..22164831693561442.2293568-CDS-P-fluviatile_contig1:2216320..2216483Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2216321..2216483 -
1622815299.8494747-CDS-P-fluviatile_contig1:2217173..22172711622815299.8494747-CDS-P-fluviatile_contig1:2217173..2217271Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2217174..2217271 -
1693561442.238171-CDS-P-fluviatile_contig1:2217173..22172711693561442.238171-CDS-P-fluviatile_contig1:2217173..2217271Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2217174..2217271 -
1622815299.8589709-CDS-P-fluviatile_contig1:2217795..22179041622815299.8589709-CDS-P-fluviatile_contig1:2217795..2217904Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2217796..2217904 -
1693561442.2473369-CDS-P-fluviatile_contig1:2217795..22179041693561442.2473369-CDS-P-fluviatile_contig1:2217795..2217904Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2217796..2217904 -
1622815299.8692029-CDS-P-fluviatile_contig1:2218860..22190241622815299.8692029-CDS-P-fluviatile_contig1:2218860..2219024Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2218861..2219024 -
1693561442.25789-CDS-P-fluviatile_contig1:2218860..22190241693561442.25789-CDS-P-fluviatile_contig1:2218860..2219024Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2218861..2219024 -
1622815299.878968-CDS-P-fluviatile_contig1:2219496..22196311622815299.878968-CDS-P-fluviatile_contig1:2219496..2219631Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2219497..2219631 -
1693561442.268835-CDS-P-fluviatile_contig1:2219496..22196311693561442.268835-CDS-P-fluviatile_contig1:2219496..2219631Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2219497..2219631 -
1622815299.888361-CDS-P-fluviatile_contig1:2220207..22202791622815299.888361-CDS-P-fluviatile_contig1:2220207..2220279Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2220208..2220279 -
1693561442.2769659-CDS-P-fluviatile_contig1:2220207..22202791693561442.2769659-CDS-P-fluviatile_contig1:2220207..2220279Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2220208..2220279 -
1622815299.8976865-CDS-P-fluviatile_contig1:2220968..22210161622815299.8976865-CDS-P-fluviatile_contig1:2220968..2221016Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2220969..2221016 -
1693561442.2849307-CDS-P-fluviatile_contig1:2220968..22210161693561442.2849307-CDS-P-fluviatile_contig1:2220968..2221016Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 2220969..2221016 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.171.1prot_P-fluviatile_contig1.171.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig1 2216321..2221016 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig1.171.1

>prot_P-fluviatile_contig1.171.1 ID=prot_P-fluviatile_contig1.171.1|Name=mRNA_P-fluviatile_contig1.171.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=263bp
MAATVVGGGRIGSALYEMGGGEDTLVGRADVIPEGDGPIYVCTRNDDLED
VILRTPPARREDLVFLQNGVLGPLLAKHGLVKNTQALIYFAVSKKGEPPI
DGVTDANPDGLTSTCGKWAGEFKQRLARGGLTCHEVPEDRYKARMYEKHI
WICAFMVAGAAYKCTVGEVEANHAEEVRALISELQAAIEGKYGVVFEDGV
KERLCAYTRSVAHYPAAVKEFSWRNGFFWDMSETAKKEGKEDPCPLHTKL
LREVADEQGLSL*
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mRNA from alignment at P-fluviatile_contig1:2215663..2221040-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig1.171.1 ID=mRNA_P-fluviatile_contig1.171.1|Name=mRNA_P-fluviatile_contig1.171.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5378bp|location=Sequence derived from alignment at P-fluviatile_contig1:2215663..2221040- (Porterinema fluviatile SAG_2381)
GCTCAACGAAGCCACGTAACGACGATGGCTGCCACGGTTGTCGGAGGAGG
CCGCATCGGAAGCGCGCTCTACGTGAGTATGACATGGTAGGTATCCAATT
ATCTGCTTTCCATCGCCTCACCCGCTGCTTGTTGGTGCAGCACACCGATC
TACTTACCCCGAAGCACCGATCTACTTATCATGTGTCACCAAACGAGACA
CCCCGCAACAGCGTGCAGCGTTCTGATCTGTCGAACCAAGACCGGCGAAG
GATGGGCGACGGGACGGATGCAGGGCAGACACCCTTGCAAGAAGCACTTC
ATGTTGCCCCTTTTTCGGCGGAGTGACACGATCGCATCGCACGGTGTTCG
TGACGTTCAGCACCTTTTTCGCTACATCCTTCCAACCGTCAGTGTTCAGG
TGTTCTTTCGGCGAGGAGACGTCATAGACTCAATGACGCTCTAATACAGT
AATAGGAAAACGACCCTTACCACCCCCACCCCTCCTCCCTCCGCCCTCTT
CCTCGATAGCGCGAAATGAGGGGGTACGGGGGGCCCGAATCTCGTCCATT
ACGTTGAGAATATTTACGCGCTATGTGTCGGCACGTCTGTAGGAAAACGC
GGTTTGCATCAGGCGTTCACCGCCCGTTTTCATGAGAAACATTTTCTGCA
CGTCCAACCGTGGAAACACCTGAGCCAAAATTTGGACTACCCTTCAGGAC
ATCGACGTAGCACGAAATAGCTGTGCGGCATTGCACTAACGCCCGATCTT
TCTGTGTGTAGGAAATGGGCGGTGGCGAGGACACGCTGGTCGGACGAGCC
GACGTCATCCCGGAAGGTGATGGGCCAATCTACGTGAGTGCGGCACCGCA
TGATTTTTGCCAAAGCACAAGACAACGTTTACCACACACCCCTTGAAGCG
ATCATTGAAACTTAAACGCTCGATGGAAGGACGATAGCCGTTGTGAAATA
AGCTGACCTTTGAAGGAGTGCACGAAGAAAAACCAAAAGGGTAGCAGTGG
GCGCAGGTGCCCGTGTCCTGATGCCACCAAGACTTCGAAATCGGCCCAAC
AAGATGCAGCACAAACACTGTCCTTGTACGCTTTACGCGCCCACCCCTAT
GGTGAGTCTGGCGATATTCAAAGTCCAGAGAACCTCAATTTCGGAGACAA
ACGGTGTGTTCAAACATCGTCCCATACTGTAGGTGCACGAATTCTTCCAC
GTCCGCAATATACCCAACAACGGAGGGGGGGCGCACTTCTCCATCCTGCA
TTTGACGACCTTCCTCAACTCCGGAGTATACTGGTATTCACCCCCGCACG
ATATTTGGCTGGTGTCACACATGTTATGAAGTTTACACAAGCCAATCCCA
AAACATCTCTCATCCTTCGCATCGCTTGCTTGACGAACAACCTTTGATTC
AACCTGAAGGTGTGTACCCGCAACGACGATCTGGAGGACGTGATCTTACG
AACACCCCCGGCCCGGAGAGAAGACCTTGTTTTCCTGCAGAACGGCGTCC
TCGGGCCCTTGCTCGCCAAACACGGCCTAGTGAAGAATACGCAGGTAGCG
TTACCTGCAGGCGCCCCTCGTTGTCGCTCCGTCCCTGCTTCTTTGAAGCG
TTGTCGTCCGCCCACGATGATCTTAGTTGGTGTTGCTGCTTCTGTTTTTT
TTGCTTTGGTTGTTGCCGTATGTGTTTCCGAGTTTGTCGTGCGTCACGCA
CTCTTGAGTCGGTAGCGATGGTGGCATACGGCACAACTCGTCGGTACTTG
TACGCCAAGCACCCTTATTCTTTGACCGCGTGTCGGAGAACGGAAGAAGC
ACCTGACCCCGACCGCACCACCGAAGCCGCGATTCGCGCTACCAAACGCA
CGCACGTCGAACCTTACTCGTTTCTGCGGTCCGTAGTGCCTTCTATCCGA
CCAGCCAACCGCCAGCAGCGCGTCTCGCCAACCCAAAGTCAACCCAACCT
ACCACGCTCGCTCGGCGATGCCGGTGTGATTTTACCCCACCGCAATTGTT
GCCCGCATCCCATCAGGCGCTGATCTACTTCGCGGTGTCGAAGAAGGGGG
AGCCCCCGATAGACGGCGTCACGGACGCCAACCCTGACGGCCTGACGTCG
ACGTGCGGAAAGTGGGCGGGAGAGTTTAAGCAGAGGCTAGCCAGGGGGGG
GTTAACTTGCCACGAGGTACCCGAAGACAGGTACGTGGCAGCTCTAGGAC
TCCCCATTGTGCCCCTTCCCCCTGATTCTTCGATCCCGGGCTTTATCCTG
GGATGGCCAACGTATGCCCGGCATTATTCGCGTCAACCCGCGGCCCGGGC
CTTGGAAATTGCGAGCTCTTTCTACAAACACGGGAGCGTAACCCCCTAGT
GGCTTCTGTGTGCTGGACCAGGCTGAAGCTGCTGAACGTGTTTACAGGGA
AGCAAGGGTAACAACCGGATCGTCAACGCCGGCCTTACTTGTCAAACGTG
ACGACATTTCCGTCATGTGGCGAGGAGGCCACGCCCTGCCGCTAGTATGG
TTGCAAAGCAGAACCCGAGGAATGCCTTGCTGTATTTACTTCTTCCGCTG
CGTGAGCTACACTATCGCCCCAGTCGTATGCTCAAAGAAAGGGTTCACGT
GATACTAAAGTACTGGTAGCGGATTGAGCCTGGGAAAAACTTCACCTCGA
CGGTATTGCTAAAGGCAAATGTAAGCGCGTGGAAGTCGTCATCAACCCCA
TGCGTCGTCGTTGTGACACAGCACGGGCTTGAACATGCCTGAACCCACCG
CCGAGAAGGTGTCTTCGCGCAACTTTGAACCTGTGCTTGATGGGATTCGT
GCCATGAGCCGTTCTTGTCCCAGCGCCGGTCATCAGTGGAGTATTTAGGT
GTGTCGTAGGGCATGACGTCCCGTCCGATGCCGAAGAAGCCCACCTACAC
CCACGGCTTCCGGAACAATGTAGGGTCTGCCATGATGTTGGACCCGTTAT
CGTTTTAAAGCTGCGCGACAACACCTCCATGACCGAAACTCGACCGGCCT
TTAACTTGAAGGTGCGATAGTCCCCATCGATGATCGGGTGCGCCCTCGAT
TTTTCATCGTCAACAGGAAGTGGAAATCGTGGCAGCTACAACCGTCTCAC
CTACACCCTCTCGATACGGCCATTGCTGAACGGCAGATACAAGGCGAGGA
TGTACGAAAAGCACATCTGGATTTGCGCCTTCATGGTGGCAGGCGCAGCC
TACAAGTGCACGGTGGGCGAGGTGGAGGCCAACCACGCGGAAGAGGTGAA
AATTCGTACTCGAGGCGTTGATGTTTTTGCTTTCCACAGGGATCTAGTGG
ATCTGAAGCCAATTTCATCCCATGTTTCGGTGGTCTACTTTCCAACACAC
GTGCGGTTTCATCGAGTGGAGCGTGTCATCAATTTTTTGCCTTCCGCGAA
GCGCAAGAGCTCGACACTTGTGCTTGATCCCCCAACAGCAATATTTCCAC
GCCCGACTCAGTCTTCATGGCTGCTCATCAGGAGATATAGCATGGTCTGC
AAGCGTAGCCCAAACAGCCCCCTGTTCCTTTGCGACGAGACGCTGATTCC
GGGTAGCGGCTGTACCATGCTCCGTATTATTTTGTGCAGGTTTGATTGGT
CGGACATTCTCACCTGTTGCCGAAGGAAGGTTCAGGGAAGATTTTCTCGT
CCAGCGATAAGTTAAATCTTTGTGTGGAAACGAGTTTTTCGTCCTCGACA
GACGGTCGGGATACGCCTCCCTCGTAAGGGTAGTCCCAACACATTTGCTA
GTTTTCACCCGTGCGTCAGGTACGCGCGCTTATCAGTGAACTACAAGCGG
CGATCGAGGGAAAGTACGGAGTGGTTTTCGAGGATGGGGTTAAGGAGCGT
CTATGCGCGTACACGAGGTAGGTGGCCCCTTTCTCAGTAGGTCGAGATCG
CGCGTTCCATGCTCTGAACAATCCGATCGGCCTGTCTCACACTTTTAAGG
GATTAGCCGAGCTGTAACCTTCCCTGCACCGTTGAGAATATGTACTTCTT
GAAGTGTGTCGCATGATTTGTTGGGCGTCATTGACGAAGGTGACTATTCA
CTTTTTGGCATAGGAGAGTTTAGTTCAGGTGGAGTATTTTTTTCGCATTC
TTGTCTCTTGGCGGGAGCGGATACCCCCAGCGAGAGGTTGCAGCTCTTTT
ACTGGCGTTTGCGTGTTCGCTTGTCGATCAGCTGCCGTAGTGTAACGTCG
ACTCCGAGAGGTTAAACAAGCTTTGTTGGTGGTGATTGAACAGTCGCCAG
TATTGTTTATGCTGTGCTCGTCCCGCGAAAACCATCCCTTGCTCGGTTGC
AGCACATGACGTGGGGTCCGGTCGTGTTTGACGCTGGCGGGCGGGCAACC
GTATGTAAATACACAAGCAGTTGCCCAAATAGAGCGACTCGCACTTTTAG
CCACCGAGAGAGAATGGGGCGAATCAGACAATCCATCCTGCCCGTAGCAT
CTACGCTCCCCCCCCCCGCCGCCCCTCCCCCCAGAGACCCCGTAGATCAT
TTCCTACTTCTGGTAACCCAAGCAGATCGTGCTTCTTGTTGGATCGGCGT
TCTCCAGGTCGGTGGCGCATTACCCTGCTGCCGTGAAGGAGTTTTCTTGG
CGGAACGGCTTTTTCTGGGACATGTCCGAGACGGCAAAGAAGGAGGGGAA
GGAAGACCCCTGTCCGCTCCACACCAAGCTTTTGCGAGAAGTTGCTGATG
AGCAGGGCCTGTCCCTTTGAGGCGTGGATTTCGCCCGGAGCACTGCTGAA
GTGATCACAAGGAGATAGCACTTGCGACCGGTCCCCTTAAGGATAGGTCT
TGGGCCTCTTTTGTCAATCTACACTCATCTACGAGGGCGTGTGCCGTAAA
TCCGACTGGTAAAGGCAGGCGACAGACACGCAGCGCCTCAGCCCACAATG
CTTCGTCGCGATGGACGTGAGGGCAAAAGAAACGCATTGTGTGCTTTTTT
TTCCCTGTCGTCACTGGCCAAAGTAGATAGCGTCACCGGGTGGGTATTTG
TGCGGTGTGAAATTACCCGTGCGTGTTGTCGGTCGATGAACCTCAAGGTT
CCAGCGCAACAGCACAACCAATCCAGCGTTTGGCGTACCACATGTGTGCA
TCGCAGAAGTATCCGGTGCCTGACGTCGCTTCGGGTGCGCTTTCTCTTGA
AACAACAAGCCCTGCGACGAACAGTCAAGGGCCGGTTCGGGAGCTTGGAC
TCTTTTCCTGTCGGAGAGGTTGCCTCGTAACGATCGCGTTCTGATGTCAG
CAGGGTGCAACGTGCAACACGGTGGACTCGTGGGGAATGCCTCTCGATTG
ATTGCCATGTGCAGCGGCGATCTCAACAGGAGGCCGGCTTTTTCACAGCG
GTCAACACTTAAAACTGTGCATGTGGAC
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Coding sequence (CDS) from alignment at P-fluviatile_contig1:2215663..2221040-

>mRNA_P-fluviatile_contig1.171.1 ID=mRNA_P-fluviatile_contig1.171.1|Name=mRNA_P-fluviatile_contig1.171.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1578bp|location=Sequence derived from alignment at P-fluviatile_contig1:2215663..2221040- (Porterinema fluviatile SAG_2381)
ATGGCTGCCACGGTTGTCGGAGGAGGCCGCATCGGAAGCGCGCTCTACAT
GGCTGCCACGGTTGTCGGAGGAGGCCGCATCGGAAGCGCGCTCTACGAAA
TGGGCGGTGGCGAGGACACGCTGGTCGGACGAGCCGACGTCATCCCGGAA
GGTGATGGGCCAATCTACGAAATGGGCGGTGGCGAGGACACGCTGGTCGG
ACGAGCCGACGTCATCCCGGAAGGTGATGGGCCAATCTACGTGTGTACCC
GCAACGACGATCTGGAGGACGTGATCTTACGAACACCCCCGGCCCGGAGA
GAAGACCTTGTTTTCCTGCAGAACGGCGTCCTCGGGCCCTTGCTCGCCAA
ACACGGCCTAGTGAAGAATACGCAGGTGTGTACCCGCAACGACGATCTGG
AGGACGTGATCTTACGAACACCCCCGGCCCGGAGAGAAGACCTTGTTTTC
CTGCAGAACGGCGTCCTCGGGCCCTTGCTCGCCAAACACGGCCTAGTGAA
GAATACGCAGGCGCTGATCTACTTCGCGGTGTCGAAGAAGGGGGAGCCCC
CGATAGACGGCGTCACGGACGCCAACCCTGACGGCCTGACGTCGACGTGC
GGAAAGTGGGCGGGAGAGTTTAAGCAGAGGCTAGCCAGGGGGGGGTTAAC
TTGCCACGAGGTACCCGAAGACAGGCGCTGATCTACTTCGCGGTGTCGAA
GAAGGGGGAGCCCCCGATAGACGGCGTCACGGACGCCAACCCTGACGGCC
TGACGTCGACGTGCGGAAAGTGGGCGGGAGAGTTTAAGCAGAGGCTAGCC
AGGGGGGGGTTAACTTGCCACGAGGTACCCGAAGACAGATACAAGGCGAG
GATGTACGAAAAGCACATCTGGATTTGCGCCTTCATGGTGGCAGGCGCAG
CCTACAAGTGCACGGTGGGCGAGGTGGAGGCCAACCACGCGGAAGAGATA
CAAGGCGAGGATGTACGAAAAGCACATCTGGATTTGCGCCTTCATGGTGG
CAGGCGCAGCCTACAAGTGCACGGTGGGCGAGGTGGAGGCCAACCACGCG
GAAGAGGTACGCGCGCTTATCAGTGAACTACAAGCGGCGATCGAGGGAAA
GTACGGAGTGGTTTTCGAGGATGGGGTTAAGGAGCGTCTATGCGCGTACA
CGAGGTACGCGCGCTTATCAGTGAACTACAAGCGGCGATCGAGGGAAAGT
ACGGAGTGGTTTTCGAGGATGGGGTTAAGGAGCGTCTATGCGCGTACACG
AGGTCGGTGGCGCATTACCCTGCTGCCGTGAAGGAGTTTTCTTGGCGGAA
CGGCTTTTTCTGGGACATGTCCGAGACGGCAAAGAAGGAGGGGAAGGAAG
ACCCCTGTCCGCTCCACACCAAGCTTTTGCGAGAAGTTGCTGATGAGCAG
GGCCTGTCCCTTTGAGTCGGTGGCGCATTACCCTGCTGCCGTGAAGGAGT
TTTCTTGGCGGAACGGCTTTTTCTGGGACATGTCCGAGACGGCAAAGAAG
GAGGGGAAGGAAGACCCCTGTCCGCTCCACACCAAGCTTTTGCGAGAAGT
TGCTGATGAGCAGGGCCTGTCCCTTTGA
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