mRNA_P-fluviatile_contig1.139.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig1.139.1 vs. uniprot
Match: D7FIG2_ECTSI (EDR2_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIG2_ECTSI) HSP 1 Score: 520 bits (1338), Expect = 8.790e-172 Identity = 314/494 (63.56%), Postives = 345/494 (69.84%), Query Frame = 1
Query: 79 MSKWLG-RRS------------PPPLVSASCKLKGGV-------SPKSGRRTTEETALGGTASRRSSQQSEAVEHAGEDAAGAVSDPGKGKANADHDSEWEMLEHASA-LEGLGGTEGEHDDVAAAARPLSPGVDFSTAYMVHKEGRAGQLEADKEASAGEEYDDCKWQDAAIIHSFLVRGPTYLQNKAKLPAGAAMCRLLGFDCFTESSKGTTRIDHIASRGACRERVEAMTSGDDAPFLFIMNIQVRGTPPVSMVAYWAVDRQGLQAATRKTAQTTTAAG---GGPQPRAEANGGTNAA-GXGHVANGAGRGGGDTKGQLSADAAAGVENGVGKIGRG-VSEHERVFLEIVASYADFPVSSFGGDSCAMMDETTPPPYSDERNARFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSPAAASLCGRCRGLSRKIDVELGIVLQANSAGELPEALLGAVRLNGFGVEDPALQTKLF 1482
MSKWLG RRS PP V A + G +P++GRR + E + SRRSS+ E + AA A G G + +D +WE+++H SA L GL G +GE A A RPLSPGVDFS A MV +EG G+ +A AS + D C+W+DAA IHSFLVRGPTYLQ+KAKLPAG AMCRL+GFDCFTE+SKGTTRIDHIASRG CRERVEAMTSGDDAPFLFIMNIQVRGTPPVSMVAYWAVDR GL+ A TAAG G P + T AA NG G+ G++ G G G G G VS E VF IVASYAD PVS+FGGD CAMMD PPPYSDERN RFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSPAAASLCGRCRGLSRKIDVELGIVLQANSA ELPEALLGAVRLNGFGVEDP LQTKL+
Sbjct: 1 MSKWLGLRRSGARSPTSAASALPPDDVPAFLGKQDGSGAAFSAPTPRTGRRRSSEETVDADTSRRSSRDDEDAQKG---AAPADHGRGPGDSVSDECCDWEVVQHTSADLSGLVGLDGE----AEAERPLSPGVDFSAACMVDREGEEGR-QAGASASGCDGNDTCRWKDAASIHSFLVRGPTYLQDKAKLPAGRAMCRLVGFDCFTENSKGTTRIDHIASRGTCRERVEAMTSGDDAPFLFIMNIQVRGTPPVSMVAYWAVDRDGLEEAK----DAATAAGTLQGVPSDHIDT---TEAAVDETDTENGLGQSVGESNGLT----------GAGPQGEGDVSGRESVFSRIVASYADIPVSTFGGDECAMMDTAPPPPYSDERNTRFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSPAAASLCGRCRGLSRKIDVELGIVLQANSAQELPEALLGAVRLNGFGVEDPDLQTKLY 469
BLAST of mRNA_P-fluviatile_contig1.139.1 vs. uniprot
Match: A0A6H5K9Q7_9PHAE (EDR2_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9Q7_9PHAE) HSP 1 Score: 344 bits (882), Expect = 5.010e-102 Identity = 195/267 (73.03%), Postives = 203/267 (76.03%), Query Frame = 1
Query: 682 GACRERVEAMTSGDDAPFLFIMNIQVRGTPPVSMVAYWAVDRQGLQAATRKTAQTTTAAGGGPQPRAEANGGTNAAGXGHVANGAGRGGGDTKGQLSADAAAGVENGVGKIGRGVSEHERVFLEIVASYADFPVSSFGGDSCAMMDETTPPPYSDERNARFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSPAAASLCGRCRGLSRKIDVELGIVLQANSAGELPEALLGAVRLNGFGVEDPALQTKLF 1482
G CRERVEAMTSGDD PFLFIMNIQVRGTPPVSMVAYWAVDR GL+ A K A T G P N A NG G+ G++ G A G K G VS ERVF IVASYAD PVS+FGGD C+MMD PPPYSDERN RFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSPAAASLC RCRGLSRKIDVELGIVLQANSA ELPEALLGAVRL+GFGVEDP LQTKL+
Sbjct: 408 GTCRERVEAMTSGDDGPFLFIMNIQVRGTPPVSMVAYWAVDRHGLEEA--KDAATAAGILQGV-PSDHTNTTEAAVDETDTENGLGQSVGESNGLTGA--------GPQKEGD-VSGRERVFSRIVASYADIPVSTFGGDECSMMDTAPPPPYSDERNTRFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSPAAASLCSRCRGLSRKIDVELGIVLQANSAHELPEALLGAVRLSGFGVEDPDLQTKLY 662
BLAST of mRNA_P-fluviatile_contig1.139.1 vs. uniprot
Match: A0A7S2WM21_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WM21_9STRA) HSP 1 Score: 164 bits (415), Expect = 2.050e-40 Identity = 107/320 (33.44%), Postives = 151/320 (47.19%), Query Frame = 1
Query: 517 WQDAAIIHSFLVRGPTYLQNKAKLPAGAAMCRLLGFDCF-TESSKGTTRIDHIASRGACRERVEAMTSGDDAPFLFIMNIQVRGTPPVSMVAYWAV----DRQGLQAATRKTAQTTTAAGGGPQPRAEANGGTNAAGXGHVANGAGRGGGDTKGQLSADAAAGVENGVGKIGRGVSEHERVFLEIVASY-ADFPVSSFGGDSCAMMD-ETTPPPYSDERNARFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSPAAASLCGRCRGLSRKIDVELGIVLQANSAGELPEALLGAVRLNGFGVE 1455
WQD++ H F VRGP Y+ +K K+ AG A+C L+ + + E S+ RIDH+A++G CR VEA+ + APFLFI+NIQV G PP+SMV +A+ DR+ S+DA F ++ +Y D PV + E P RN RFKLIPR++ GP++VR AVG+ P LLG K+T RYYRG+ Y+ETD+ GS+ A + G R S+ + VE+ I ++ ELPE L+G V+ +E
Sbjct: 127 WQDSSNTHDFHVRGPFYMSDKLKVHAGTAVCPLVLYQLYRNEPSRLNDRIDHVAAKGKCRRIVEALRELNPAPFLFILNIQVPGHPPMSMVMIFAMPADYDRR---------------------------------------------------DCSSDAVK-------------------FRNMLQTYYQDLPVHDPSNPQSPTEEGEAGLSPSDHFRNQRFKLIPRIVDGPFLVRNAVGAKPALLGQKLTQRYYRGKNYIETDVHVGSNAVANHITGISRTYSKSVTVEIAITIEGRQEAELPEKLVGVVKFTHTDIE 376
BLAST of mRNA_P-fluviatile_contig1.139.1 vs. uniprot
Match: A0A7S2CMY1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CMY1_9STRA) HSP 1 Score: 152 bits (385), Expect = 1.480e-35 Identity = 111/329 (33.74%), Postives = 147/329 (44.68%), Query Frame = 1
Query: 517 WQDAAIIHSFLVRGPTYLQNKAKLPAGAAMCRLLGFDCFTESSKG--TTRIDHIASRGACRERVEAMTSGDDA--PFLFIMNIQVRGTPPVSMVAYWAVDRQGLQAATRKTAQTTTAAGGGPQPRAEANGGTNAAGXGHVANGAGRGGGDTKGQLSADAAAGVENGVGKIGRGVSEHERVFLEIVASY-ADFPVSSFGGDSCAMMDETTPPPYSDE-----------RNARFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSPAAASLCGRCRGLSRKIDVELGIVLQANSAGELPEALLGAVRLNGFGVE 1455
W D HS VRG YL++KAK+ + A CRLL F + + + RIDHIASRG + ++ S D PFL+I+NIQ+ G PP+SMV Y+ + Q SAD + FL++ Y D P+ TT PP SD RN RFKLIP + GP++V++AVG+ P LLG K+T RY+RGE YVETD+ GSS A + G CRG + + VE+GIVL+ S ELPE L+G R +E
Sbjct: 227 WSDGCTDHSLSVRGAFYLEDKAKVKSPAT-CRLLHFANYRVDTDRFPSERIDHIASRGRAKALIDEWVSLDPQRPPFLYIVNIQLPGKPPLSMVMYFLLPTDLAQQ-----------------------------------------------DPSADT-------------------QKFLDLFQKYYEDIPI-------------TTEPPASDTPDAGVYPLEHLRNQRFKLIPAITEGPFLVKQAVGAKPALLGQKLTQRYFRGEHYVETDVHVGSSAIANQVVGLCRGYCKALTVEIGIVLEGRSEAELPEKLIGVGRFKKIDIE 475
BLAST of mRNA_P-fluviatile_contig1.139.1 vs. uniprot
Match: A0A835YT80_9STRA (EDR2_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT80_9STRA) HSP 1 Score: 133 bits (335), Expect = 2.620e-32 Identity = 67/131 (51.15%), Postives = 86/131 (65.65%), Query Frame = 1
Query: 1120 ETTPPPYSDE----------RNARFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSPAAASLCGRCRGLSRKIDVELGIVLQANSAGELPEALLGAVRLNGFGVEDPALQTKLF 1482
E +PPP SD N+RFKLIP+++ GPW+VR+AVG+ P LLGTK+T RY+RGE YVET+++ GSS A + G CRG S +IDV+LG+VLQ A LPE LLG V+ V+DP LF
Sbjct: 33 EVSPPPASDVSGGIRHSYAFHNSRFKLIPQIVDGPWVVRRAVGAVPCLLGTKVTTRYFRGEHYVETNVEVGSSVVAQRIIGCCRGYSGRIDVQLGVVLQGEEADTLPEELLGTVQFRWLQVDDPRGVVPLF 163
BLAST of mRNA_P-fluviatile_contig1.139.1 vs. uniprot
Match: D7G1Z5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1Z5_ECTSI) HSP 1 Score: 140 bits (354), Expect = 7.270e-31 Identity = 125/405 (30.86%), Postives = 168/405 (41.48%), Query Frame = 1
Query: 517 WQDAAIIHSFLVRGPTYLQNKAKLPAGAAMCRLLGFDCFTESSKGTTRIDHIASRGACRERVEAMTS-----GDDAPFLFIMNIQVRGTPPVSMVAYWAVD-----RQGLQAATRKTAQTTTAAGGGPQPRAEANGGTNAAGXGHVANGAGRGGGDTKGQLSAD-----------------------------------------------------------------------------AAAGVENGVGK-IGRGVSEHERVFLEIVASYADFPVSSFGGDSCAMMDETTPP----PYSDERNARFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSPAAASLCGRCRGLSRKIDVELGIVLQANSAGELPEALLGAVRLNGFGVE 1455
W+D FLVRGP Y+ ++ K+PAG A RL+ D F+ + + H+AS+G CR+RV A G+ APFLFI+NI V G P V+ V Y A+D R G+ + + AGGG R + T A A G G + S AG+E G G G + L A+ S GG A D + P P D RN RFKLIP V+ GP++VRKAVG+ P LLG K++ RY+RG YVETD+D GSS A + CRG ++ + VELGI L+ ELPE ++G +RL ++
Sbjct: 236 WKDGGPGCQFLVRGPKYISDRKKIPAGPAAMRLVHVDFFSVEGE----VFHVASKGRCRDRVSAFLKSYEDKGEAAPFLFILNILVPGNPVVATVMYLALDQTTQRRDGVGLG-EEGVSSPVPAGGGDSARHD----TFLAMLARYAEVPGSGYNKLERTRSPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAGVAGLEGGNGPPAAEGAAGAGAEALSTGAA------SRGGGLGGAPADRNSDPAGLLPVDDFRNQRFKLIPSVVSGPFIVRKAVGNKPALLGRKVSQRYFRGPGYVETDVDVGSSMIAEKIVSLCRGYAKALTVELGICLEGRCDEELPETVMGVIRLVNVDID 625
BLAST of mRNA_P-fluviatile_contig1.139.1 vs. uniprot
Match: W7U3Y4_9STRA (PX domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U3Y4_9STRA) HSP 1 Score: 138 bits (347), Expect = 1.360e-29 Identity = 122/396 (30.81%), Postives = 169/396 (42.68%), Query Frame = 1
Query: 310 SEWEMLEHASALEGLGGTEGEH--DDVAAAARPLSPGVDFSTAYMVHKEGRAGQLEADKEASAGEEYDDCK-WQDAAIIHSFLVRGPTYLQNKAKLPAGAAMCRLLGFDCFTESSKGT-TRIDHIASRGACRERVEAMTS--GDDAP--FLFIMNIQVRGTPPVSMVAYWAVDRQGLQAATRKTAQTTTAAGGGPQPRAEANGGTNAAGXGHVANGAGRGGGDTKGQLSADAAAGVENGVGKIGRGVSEHERVFLEIVASYADFPVSSFGGDSCAMMDETTPPPYSDERNARFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSPAAASLCGRCRGLSRKIDVELGIVLQA-NSAGELPEALLGAVRL-----NGFGVE 1455
S+W+ L +S L LG T+ DD +AA SP H+ RA AS G + D +SF VRG YL ++ K PAG + L+ F S + R DHIASRG E + M G D F F++N QV G PP+SMV +A+ R R+ A+ + F + + DFP+ G+ + D SD +N RFKLIP ++ GP M++ AVG+ P +LG K+T RY+RGE YVE D+D SS A+ + CRG ++ + VE+GI+LQ + ELPE LLG + + N FGVE
Sbjct: 500 SQWDRLGPSSGLPFLGPTDRNRPSDDPSAAPAAASPPP------SPHQSVRAPGASVQDFASWGLRLQHPNAYYDPGRGNSFRVRGRRYLHDRLKTPAGPPVGELVIAYVFRISPENPGQREDHIASRGRMAEILREMQDMKGRDGKHTFFFLLNFQVPGDPPLSMVTVFALPRD------RRPAE----------------------------------------------------------------DGCFWTLFDRFVDFPMDDIKGEGKS--DRGGRYALSDFKNKRFKLIPSIVDGPSMIKWAVGNKPTILGQKLTQRYFRGEDYVEVDVDIASSALASQIVSLCRGYAKYLQVEMGILLQGEDETAELPEKLLGTIGIRNLDINSFGVE 817
BLAST of mRNA_P-fluviatile_contig1.139.1 vs. uniprot
Match: A0A835ZES7_9STRA (EDR2_C domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZES7_9STRA) HSP 1 Score: 118 bits (295), Expect = 1.040e-27 Identity = 57/99 (57.58%), Postives = 69/99 (69.70%), Query Frame = 1
Query: 1144 DERNARFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSPAAASLCGRCRGLSRKIDVELGIVLQANSAGELPEALLGAVRLN 1440
D RN RFKLIP ++ GP++VR AVG+ P LLG K+T RYYRG YVETD+D SS AA + CRG S + V+LGIVL+ + ELPE LG VRLN
Sbjct: 2 DFRNERFKLIPSIVEGPFLVRGAVGNKPALLGRKLTQRYYRGAHYVETDVDVASSSVAAHIVSMCRGASNGLSVDLGIVLEGRARAELPERCLGVVRLN 100
BLAST of mRNA_P-fluviatile_contig1.139.1 vs. uniprot
Match: D8LI57_ECTSI (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI57_ECTSI) HSP 1 Score: 127 bits (318), Expect = 8.910e-26 Identity = 97/325 (29.85%), Postives = 131/325 (40.31%), Query Frame = 1
Query: 517 WQDAAIIHSFLVRGPTYLQNKAKLPAGAAMCRLLGFDCFTESSKGTTRIDHIASRGACRERVEAMTSGDDAPFLFIMNIQVRGTPPVSMVAYWAVDRQGLQAATRKTAQTTTAAGGGPQPRAEANGGTNAAGXGHVANGAGRGGGDTKGQLSADAAAGVENGVGKIGRGVSEHERVFLEIVASYADFPV---SSFGGDSCAMMDETTPP----------PYSDERNARFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSPAAASLCGRCRGLSRKIDVELGIVLQANSAGELPEALLGAVRLNGFGV 1452
W+D H F VRGP YL K+ AG +L+ D + + G R+D+I S G + V + FL I+N+QV G PP+SMV Y+AV GG P+ G FL++ + D S G S + DE P D RN RFKL P ++ GPW+VRKAVGS P L+ K+T RY+R Y E D+D GSS A + G ++ + V++G +Q + E PE LLG VRL V
Sbjct: 1244 WEDNGESHGFRVRGPGYLSGGGKVAAGTPFGKLVRADLY-KMEAGIDRMDNIGSVGRSAKVVRRLAK--KGQFLVIVNLQVPGNPPLSMVLYYAVP---------------VPPGGVPE------------------------------------------------EGAGGKTTAFLDLFRRFVDLGPKHNSDEGDGSVSEYDEEGEGIGDAGGGGRLPGDDLRNMRFKLFPAILEGPWIVRKAVGSKPTLIAQKLTCRYFRTRSYFEVDIDIGSSVVAYNTVSLAIGYAKSLCVDMGFCIQGETDDEFPEVLLGVVRLKKMDV 1502
BLAST of mRNA_P-fluviatile_contig1.139.1 vs. uniprot
Match: T0RWT2_SAPDV (EDR2_C domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RWT2_SAPDV) HSP 1 Score: 116 bits (290), Expect = 1.560e-24 Identity = 87/313 (27.80%), Postives = 132/313 (42.17%), Query Frame = 1
Query: 547 LVRGPTYLQNKAKLPAGAAMCRLLGFDCFTESSKGTTRIDHIASRGACRERVEAMTSGDDAP--FLFIMNIQVRGTPPVSMVAYWAVDRQGLQAATRKTAQTTTAAGGGPQPRAEANGGTNAAGXGHVANGAGRGGGDTKGQLSADAAAGVENGVGKIGRGVSEHERVFLEIVASYADFPVSSFGGDSCAMMDETTPPPYSDERNARFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSPAAASLCGRCRGLSRKIDVELGIVLQANSAGELPEALLGAVRLNGFGVEDPALQTKL 1479
LVRG +Y + K+ AG + LL D + + + R DHIA R + +S P +FI+N+QV GTP V +V+YW + +GL GDTK F + + + ++ P ++ARFKL+P ++ GPW+++ AV P + G+K+T RY+ G YVE DMD GSS A+++ CRG + ++ V+L + LQ NS ELPE + G+VR + D AL T +
Sbjct: 99 LVRGLSYTIDGKKVRAGDCLGTLLHVDMWKATDEMPGRQDHIAELDLRRPQSLLASSAKAHPDDTIFIVNLQVPGTPFVHVVSYWRLPAEGLS-------------------------------------------GDTK----------------------------FAGLFSQF-----------------QSNEPEAQAFQDARFKLVPTIVDGPWLIKAAVPQKPAITGSKLTQRYFVGRNYVEVDMDIGSSAIASNIVSLCRGYAERLVVDLSLTLQGNSEAELPERIFGSVRFSHL---DLALATAI 320 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.139.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig1.139.1 >prot_P-fluviatile_contig1.139.1 ID=prot_P-fluviatile_contig1.139.1|Name=mRNA_P-fluviatile_contig1.139.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=470bp MSKWLGRRSPPPLVSASCKLKGGVSPKSGRRTTEETALGGTASRRSSQQSback to top mRNA from alignment at P-fluviatile_contig1:1834577..1842056+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig1.139.1 ID=mRNA_P-fluviatile_contig1.139.1|Name=mRNA_P-fluviatile_contig1.139.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=7480bp|location=Sequence derived from alignment at P-fluviatile_contig1:1834577..1842056+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig1:1834577..1842056+ >mRNA_P-fluviatile_contig1.139.1 ID=mRNA_P-fluviatile_contig1.139.1|Name=mRNA_P-fluviatile_contig1.139.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2820bp|location=Sequence derived from alignment at P-fluviatile_contig1:1834577..1842056+ (Porterinema fluviatile SAG_2381)back to top |