mRNA_P-fluviatile_contig1.13.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig1.13.1 vs. uniprot
Match: D8LFX1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFX1_ECTSI) HSP 1 Score: 259 bits (661), Expect = 3.490e-76 Identity = 177/341 (51.91%), Postives = 201/341 (58.94%), Query Frame = 3
Query: 72 MDAIEWPRFPARLLEAPAEEWGGLPAGGIPRADEEGEEALLAQLEDAFASDRGGHQDRAMALKTIKMFLATRRVRLLEDLLLLSTSLGDNDGGSVGSGSAAVAPHRPDQAARSS--STVADLRRELAIALEATASLKSPVAGGVEAGTETTDKKIDILLGGESRGAAAEALRAASCISTEEFFAVWAERFRMLLVPLGVGGEGAKGVESGGGXXXXSRGGSRKDDREIQAARDVERDMLSVNGTLVKGSEGYDVVVGKVRRELARLVEPVAGPDR------VGGTGRPAAXXXXXXXXXXXPQLRSSPSPPLSQGEAESLPLRPSHQLQNFSKLVLKAANR 1070
MD ++WP FP R LE AE+WG LP D EGEEALLAQLE+AFASDRGG QD A AL TI+ FL+TRRVRL+EDLL+LS SLGD+ S+ ADLRRELA AL+ T SP GG ++ + +L + G AA ALRAA+ +S E FFA WAERF LLVPLG GGE +RKDDREIQAARDVERDML VNG LVKGSEGY VVVGKV+RELARL EPVAG D + G P+ +S P QGE LPLRP QLQ+FSKLVLKAANR
Sbjct: 1 MDGMDWPSFPTRFLEDSAEDWGRLPTE---EGDGEGEEALLAQLEEAFASDRGGDQDHAKALGTIQAFLSTRRVRLIEDLLVLSASLGDSGXXXXXXXXXXXXXXXXXXXXXXXPLSSAADLRRELAFALDNTPK-PSPATGGAR------NRGVGGVLLSDD-GPAAVALRAAAGVSREAFFAEWAERFGTLLVPLGGGGEAXXXXXXXR---------ARKDDREIQAARDVERDMLMVNGVLVKGSEGYPVVVGKVKRELARLAEPVAGADTAVVGAPMASAGPPSGGASGGGGRGAVQARQSMP-----QGERTGLPLRPPRQLQDFSKLVLKAANR 316
BLAST of mRNA_P-fluviatile_contig1.13.1 vs. uniprot
Match: D8LFX2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFX2_ECTSI) HSP 1 Score: 172 bits (437), Expect = 8.980e-47 Identity = 86/115 (74.78%), Postives = 97/115 (84.35%), Query Frame = 3
Query: 1176 SSKAEPLGIDIKAESFKQRVETPFAPLERNGVPELLHGLHTFGICAHVKAVTVYSLYSADMERVHLRLRATFQNSLRLPISPFSTATCQAFSDVEYSGENGEVQIEVLEGTHDSQ 1520
S AEPLGI+I AESF Q +TPF PLER GVPEL GLH FGI A+V+A TVYSLY+ADMERV+LRLRATF+NSLRLPISPFS++TCQAFSDV Y G+ GEV+IEVLEG H SQ
Sbjct: 21 SHSAEPLGINIAAESFNQSGDTPFGPLERLGVPELQDGLHAFGIYANVEAATVYSLYTADMERVYLRLRATFRNSLRLPISPFSSSTCQAFSDVGYRGDRGEVEIEVLEGAHRSQ 135
BLAST of mRNA_P-fluviatile_contig1.13.1 vs. uniprot
Match: A0A6H5JNR3_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNR3_9PHAE) HSP 1 Score: 137 bits (345), Expect = 5.980e-34 Identity = 84/145 (57.93%), Postives = 101/145 (69.66%), Query Frame = 3
Query: 72 MDAIEWPRFPARLLEAPAEEWGGLPAGGIPRADEEGEEALLAQLEDAFASDRGGHQDRAMALKTIKMFLATRRVRLLEDLLLLSTSLGDNDGGSVGSGS----AAVAPHRPDQAARSSSTVADLRRELAIALEATASLKSPVAGG 494
M+ +EWP FPAR LE AE+WG LPA DE GEEALLAQLE+AFA+DRGG QD A AL TI+ FL+TRR+RL+EDLL+LS SLGD+ GG G G+ AA+ P+R SS+ DLRRELA+AL+ T SP GG
Sbjct: 1 MNGMEWPSFPARFLEDSAEDWGRLPAD---EGDELGEEALLAQLEEAFANDRGGDQDHAKALGTIQAFLSTRRIRLIEDLLVLSASLGDSGGGEGGRGTDVAAAAIPPYRVGVEQLSSAP--DLRRELALALDNTPK-PSPATGG 139
BLAST of mRNA_P-fluviatile_contig1.13.1 vs. uniprot
Match: A0A7S2F5R6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F5R6_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 2.680e-15 Identity = 78/273 (28.57%), Postives = 120/273 (43.96%), Query Frame = 3
Query: 693 GGGXXXXSRGGSR-KDDREIQAARDVERDMLSVNGTLVKGSEGYDVVVGKVRRELARLVEPVAGPDRVGGTGRPAAXXXXXXXXXXXPQLRSSPSPPLSQGEAESLPLRPSHQLQNFSKLVLKAANRQEAQTESGGLSFDAIHRIMALCPSACDGSVMVVPDSSKAEPLGIDIKAESFKQRVETPFAPLERNGVPELLHGLHTFGICAHVKAVTVYSLYSADMERVHLRLRATFQNSLRLPISPFSTATCQAFSDV-EYSGENGEVQIEVLEG 1505
GGG S R +D + Q+ RD ERDML +NGT++KG++G+D VV + L+ + G P + QL++F++ L+A NR TESG SF + LC +A ++VPDS A PL ID+ + P++ + G +G+ A V VTVYS++ + MERV R+ +TF++ + LP++ S A + V E G V I++ G
Sbjct: 11 GGGICSTSGESERARDASDHQSIRDTERDMLKINGTMIKGADGFDKVVSCFVAQAGTLLSA-------------------------------------ANGHTPLFPKPSATQLEDFARTSLRAVNR----TESGHWSFQLVS---FLCSNA--HCAVIVPDSKNAGPLSIDLSVGPLRCDDLKTGDPVDHHS----RGGTWGWGLRAQVHTVTVYSIFDSTMERVLARVTSTFRHRVVLPLAHASPACLKNRGVVWERIGHPSSVSIKLDSG 233
BLAST of mRNA_P-fluviatile_contig1.13.1 vs. uniprot
Match: A0A024FYH3_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FYH3_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 4.520e-9 Identity = 61/229 (26.64%), Postives = 101/229 (44.10%), Query Frame = 3
Query: 747 IQAARDVERDMLSVNGTLVKGSEGYDVVVGKVRRELARLVEPVAGPDRVGGTGRPAAXXXXXXXXXXXPQLRSSPSPPLSQGEAESLPLRPSHQLQNFSKLVLKAANRQEAQTESGGLSFDAIHRIMALCPSACDGSVMVVPDSSKAEPLGIDIKAESFKQRVETPFAPLERNGVPELLHGLHTFGICAHVKAVTVYSLYSADMERVHL-RLRATFQNSLRLP--ISPF 1424
Q ++D++RD + +NG + G++GYD +V +++R L RL+ V P SQ + + + ++ +L A NR TESGG S++ + R + + ++ PDSSKAEPL ++IK F +E E N + + +FG+ A+T YS+ +D L L AT++ L P I+PF
Sbjct: 259 FQDSKDIQRDSIQINGEIALGTQGYDAIVAQIQRVLERLLSKVL--------------------------------PKCSQKMKD--------RTTSMAREILHACNR----TESGGFSYEMLSRFLT---NHSTQHIICRPDSSKAEPLSVEIKLGGFHSHME------EENLLKQC-----SFGVQVLCSALTRYSICKSDDPTCALYSLAATYKQELLFPCKITPF 429
BLAST of mRNA_P-fluviatile_contig1.13.1 vs. uniprot
Match: F0WMC1_9STRA (Uncharacterized protein AlNc14C155G7626 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WMC1_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 1.160e-8 Identity = 62/229 (27.07%), Postives = 103/229 (44.98%), Query Frame = 3
Query: 747 IQAARDVERDMLSVNGTLVKGSEGYDVVVGKVRRELARLVEPVAGPDRVGGTGRPAAXXXXXXXXXXXPQLRSSPSPPLSQGEAESLPLRPSHQLQNFSKLVLKAANRQEAQTESGGLSFDAIHRIMALCPSACDGSVMVVPDSSKAEPLGIDIKAESFKQRVETPFAPLERNGVPELLHGLHTFGICAHVKAVTVYSLYSADMERVHLR-LRATFQNSLRLP--ISPF 1424
Q ++D++RD + +NG + G++GYD +V +++ + RL+E +SP P S +L ++ +L A NR TESGG SF+ + + + V+ PDSSKAEPL ++IK F+ +E E N + + G+H +C+ A+T YS+ +D L L AT++ L P ++PF
Sbjct: 295 FQDSKDIQRDSIRINGQIALGTQGYDAIVDQIQCVIKRLIEI------------------------------TSPILPESMEANTTL----------MAREILHACNR----TESGGFSFEMLSSFLT---NHTTKHVLCRPDSSKAEPLSVEIKLGGFRSHME------EENLLKQCSFGVHV--MCS---ALTRYSICRSDDPTCTLHSLAATYKRELLFPCKLTPF 465 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.13.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig1.13.1 >prot_P-fluviatile_contig1.13.1 ID=prot_P-fluviatile_contig1.13.1|Name=mRNA_P-fluviatile_contig1.13.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=487bp MMDAIEWPRFPARLLEAPAEEWGGLPAGGIPRADEEGEEALLAQLEDAFAback to top mRNA from alignment at P-fluviatile_contig1:183528..190029- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig1.13.1 ID=mRNA_P-fluviatile_contig1.13.1|Name=mRNA_P-fluviatile_contig1.13.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=6502bp|location=Sequence derived from alignment at P-fluviatile_contig1:183528..190029- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig1:183528..190029- >mRNA_P-fluviatile_contig1.13.1 ID=mRNA_P-fluviatile_contig1.13.1|Name=mRNA_P-fluviatile_contig1.13.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2922bp|location=Sequence derived from alignment at P-fluviatile_contig1:183528..190029- (Porterinema fluviatile SAG_2381)back to top |