mRNA_P-fluviatile_contig1.121.1 (mRNA) Porterinema fluviatile SAG_2381
|
Overview
Homology
BLAST of mRNA_P-fluviatile_contig1.121.1 vs. uniprot
Match: A0A6H5KHQ4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHQ4_9PHAE) HSP 1 Score: 231 bits (588), Expect = 4.620e-72 Identity = 115/175 (65.71%), Postives = 132/175 (75.43%), Query Frame = 2
Query: 221 CTSDAAVEVLLHAVDISGRVLDMCGGPGDAVARLLGATCELVTNDVSGR------KAPDSHLDASATTFCADSLEDGTQQRPDWVVTSPPYKGALKFVKAALSVAKKGLALKLPLSFLEPCADRGAWLSANPPALCVF*RRAKYTPAQVIVGEFWGVWHNPRVDATTAGGSKLLF 727
CTS AVE LL AV++SGRVLDMCGGP DAVAR L TCE+VTNDVS R +APD+ LDAS +TF A+ L DG QQ+P+ VV SPPYKGA+KFVKAAL VAK G+ALK LSFLEPC DR WL ANPP +CVF RRA YTP V++GEFWGVW+ D T GG+KL+F
Sbjct: 120 CTSIVAVEALLDAVNVSGRVLDMCGGPDDAVARKLRDTCEVVTNDVSSRLSSDARRAPDTSLDASKSTFAAEFLADGFQQQPERVVASPPYKGAVKFVKAALCVAKHGVALKRSLSFLEPCVDRADWLEANPPTVCVFLRRASYTPEHVMMGEFWGVWYCTGGDRTAVGGTKLVF 294
BLAST of mRNA_P-fluviatile_contig1.121.1 vs. uniprot
Match: A0A6H5K049_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K049_9PHAE) HSP 1 Score: 209 bits (531), Expect = 2.300e-64 Identity = 102/155 (65.81%), Postives = 118/155 (76.13%), Query Frame = 2
Query: 221 CTSDAAVEVLLHAVDISGRVLDMCGGPGDAVARLLGATCELVTNDVSGRKAPDSHLDASATTFCADSLEDGTQQRPDWVVTSPPYKGALKFVKAALSVAKKGLALKLPLSFLEPCADRGAWLSANPPALCVF*RRAKYTPAQVIVGEFWGVWHNP 685
CTS A +E LL V ISG VLDMCGG DAVA L TC+++TNDV R +P ++LDAS+ +F D L Q+PDW+VTSPPYKGAL FVKAAL+VAKKG+ALKLPLSFLEPCADR WL ANPPALC+ RA+Y PA V VGEFWGVW+ P
Sbjct: 72 CTSPATLEALLGVVSISGCVLDMCGGTDDAVAIRLRDTCQVLTNDVGPRLSPATNLDASSASFTDDFLAAHHGQQPDWIVTSPPYKGALAFVKAALTVAKKGVALKLPLSFLEPCADRAGWLQANPPALCMMMSRARYQPAHVRVGEFWGVWYPP 226
BLAST of mRNA_P-fluviatile_contig1.121.1 vs. uniprot
Match: A0A6H5JUK3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK3_9PHAE) HSP 1 Score: 211 bits (536), Expect = 3.890e-64 Identity = 106/171 (61.99%), Postives = 129/171 (75.44%), Query Frame = 2
Query: 221 CTSDAAVEVLLHAVDISGRVLDMCGGPGDAVARLLGATCELVTNDVSGRKAPDSHLDASATTFCADSLEDGTQQRPDWVVTSPPYKGALKFVKAALSVAKKGLALKLPLSFLEPCADRGAWLSANPPALCVF*RRAKYTPAQ-VIVGEFWGVWHNPRVDATTAGGSKLLFC 730
CT AVEVL +AV I+G VLDMCGGP DAVA+ +TCE++TNDVS R + ++LDAS +F + + ++PDWVVTSPPYKGA+ FVKAAL+VA KG+ALKLPLSFLEPCADRG WL NPPA+C+F RRAKYT A V VGEFWGVW+ +GGS+L+FC
Sbjct: 130 CTLPEAVEVLQNAVAIAGCVLDMCGGPEDAVAQGFRSTCEVLTNDVSSRLSAGTNLDASLLSFRDNFRKANPGKQPDWVVTSPPYKGAVGFVKAALAVATKGVALKLPLSFLEPCADRGGWLVDNPPAVCIFLRRAKYTHAHHVKVGEFWGVWYTDGGCCGKSGGSRLVFC 300
BLAST of mRNA_P-fluviatile_contig1.121.1 vs. uniprot
Match: D7G0Y0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Y0_ECTSI) HSP 1 Score: 188 bits (478), Expect = 1.020e-56 Identity = 94/176 (53.41%), Postives = 118/176 (67.05%), Query Frame = 2
Query: 206 WTATTCTSDAAVEVLLHAVDISGRVLDMCGGPGDAVARLLGATCELVTNDVSGRKAPDSHLDASATTFCADSLEDGTQQRPDWVVTSPPYKGALKFVKAALSVAKKGLALKLPLSFLEPCADRGAWLSANPPALCVF*RRAKYTPAQ-VIVGEFWGVWHNPRVDATTAGGSKLLFC 730
W CTS A++ L AVDI+G VLDMCGGP DAVA L +TCE++TNDVS + D++LDAS +F D L + +RP+WV TSPPY AL FVKAA+S+A KG+ K+ + FLEPCAD G WL NPP+LCVF RRAKYT A EFWGVW+ + ++L+FC
Sbjct: 26 WLDRYCTSPEAMDASLGAVDITGCVLDMCGGPTDAVATRLRSTCEILTNDVSSGRPADTNLDASLESFPEDFLAAYSGKRPEWVATSPPYSRALTFVKAAMSLATKGVTFKMHIFFLEPCADWGGWLQTNPPSLCVFLRRAKYTRANNAKTSEFWGVWYTQEMSCRNR--TRLVFC 199
BLAST of mRNA_P-fluviatile_contig1.121.1 vs. uniprot
Match: D7FJU4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJU4_ECTSI) HSP 1 Score: 188 bits (478), Expect = 1.890e-56 Identity = 92/137 (67.15%), Postives = 109/137 (79.56%), Query Frame = 2
Query: 221 CTSDAAVEVLLHAVDISGRVLDMCGGPGDAVARLLGATCELVTNDVSGRKAP-----DSHLDASATTFCADSLEDGTQQRPDWVVTSPPYKGALKFVKAALSVAKKGLALKLPLSFLEPCADRGAWLSANPPALCVF 616
CTS AVE LL AV++ G VLDMCGGPGDA+A LGATC++VTND+S R +P D++LDAS +F D L QRPDWV+TSPPYKGAL++VK+ALS+A KG+ALKLPLSFLEPCADRG WL ANPPA+CVF
Sbjct: 84 CTSPEAVEALLGAVELEGCVLDMCGGPGDAIATRLGATCKVVTNDISTRLSPGGLPPDTNLDASLASFAVDFLLAKPGQRPDWVLTSPPYKGALEYVKSALSLAAKGVALKLPLSFLEPCADRGGWLQANPPAVCVF 220
BLAST of mRNA_P-fluviatile_contig1.121.1 vs. uniprot
Match: D8LSI1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSI1_ECTSI) HSP 1 Score: 171 bits (433), Expect = 1.250e-50 Identity = 83/149 (55.70%), Postives = 105/149 (70.47%), Query Frame = 2
Query: 287 MCGGPGDAVARLLGATCELVTNDVSGRKAPDSHLDASATTFCADSLEDGTQQRPDWVVTSPPYKGALKFVKAALSVAKKGLALKLPLSFLEPCADRGAWLSANPPALCVF*RRAKYTPAQ-VIVGEFWGVWHNPRVDATTAGGSKLLFC 730
MCGGP DAVA L +TCE++TNDVS + D++L+AS F D L + +RP+WVVTSPPY AL FVKAA+S+A KG+A K+P+ FLEPCADRG WL NPP++CVF RRAKYT A GEFWGVW+ + ++L+FC
Sbjct: 1 MCGGPTDAVATRLRSTCEILTNDVSSGRPADTNLNASLELFPEDFLAAYSGKRPEWVVTSPPYSRALTFVKAAMSLATKGVAFKMPIFFLEPCADRGGWLQTNPPSVCVFLRRAKYTRANNAKTGEFWGVWYPQEMSCRNR--TRLVFC 147
BLAST of mRNA_P-fluviatile_contig1.121.1 vs. uniprot
Match: A0A6H5K929_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K929_9PHAE) HSP 1 Score: 163 bits (413), Expect = 7.950e-48 Identity = 86/149 (57.72%), Postives = 100/149 (67.11%), Query Frame = 2
Query: 287 MCGGPGDAVARLLGATCELVTNDVSGRKAPDSHLDASATTFCADSLEDGTQQRPDWVVTSPPYKGALKFVKAALSVAKKGLALKLPLSFLEPCADRGAWLSANPPALCVF*RRAKYTPAQ-VIVGEFWGVWHNPRVDATTAGGSKLLFC 730
MCGGP DAVA G TCE++TNDVS R +P G Q PDWVVTSPPYKGA+ FVKA L+VA KG+AL+LPLSF +PCADRG+WL NPP +C F RRAKYT A V VGEFWGVW+ +GGS+L+FC
Sbjct: 1 MCGGPEDAVALGFGGTCEVLTNDVSSRLSP---------------AHPGKQ--PDWVVTSPPYKGAVGFVKAVLAVAAKGVALRLPLSFRKPCADRGSWLVDNPPVMCGFLRRAKYTHAHHVKVGEFWGVWYTDG-GCGKSGGSRLVFC 131
BLAST of mRNA_P-fluviatile_contig1.121.1 vs. uniprot
Match: A0A6H5JSV3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSV3_9PHAE) HSP 1 Score: 162 bits (410), Expect = 7.870e-47 Identity = 76/119 (63.87%), Postives = 91/119 (76.47%), Query Frame = 2
Query: 371 APDSHLDASATTFCADSLEDGTQQRPDWVVTSPPYKGALKFVKAALSVAKKGLALKLPLSFLEPCADRGAWLSANPPALCVF*RRAKYTPAQVIVGEFWGVWHNPRVDATTAGGSKLLF 727
+PD++LDAS+ +F D L +Q+PDWVVT PPY GAL FVKAAL VAKKG+ALKLPLSFLEPCADR WL ANPPALC+ RA+Y PA V VGEFWGVW+ P +++ +KLLF
Sbjct: 52 SPDTNLDASSASFTDDFLAAHHEQQPDWVVTRPPYNGALAFVKAALPVAKKGVALKLPLSFLEPCADRAGWLQANPPALCMMMSRARYQPAHVRVGEFWGVWYPPGSGYSSSDSTKLLF 170
BLAST of mRNA_P-fluviatile_contig1.121.1 vs. uniprot
Match: A0A6H5KAM1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAM1_9PHAE) HSP 1 Score: 158 bits (400), Expect = 7.100e-46 Identity = 73/119 (61.34%), Postives = 90/119 (75.63%), Query Frame = 2
Query: 371 APDSHLDASATTFCADSLEDGTQQRPDWVVTSPPYKGALKFVKAALSVAKKGLALKLPLSFLEPCADRGAWLSANPPALCVF*RRAKYTPAQVIVGEFWGVWHNPRVDATTAGGSKLLF 727
+PD++LDAS+T++ D L Q+PDWVV SPPYKGAL FVKAAL+VAK+G+ALKLPLSFLEPCADR WL NPP+LC+ RA+Y PA V VGEFWGVW+ P ++ +KL F
Sbjct: 11 SPDTNLDASSTSYADDYLAAHNGQQPDWVVASPPYKGALSFVKAALTVAKEGVALKLPLSFLEPCADRAGWLQENPPSLCMMMSRARYQPAHVRVGEFWGVWYPPGGGSSIGDSTKLSF 129
BLAST of mRNA_P-fluviatile_contig1.121.1 vs. uniprot
Match: A0A6H5JT40_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT40_9PHAE) HSP 1 Score: 158 bits (399), Expect = 1.040e-45 Identity = 75/121 (61.98%), Postives = 94/121 (77.69%), Query Frame = 2
Query: 365 RKAPDSHLDASATTFCADSLEDGTQQRPDWVVTSPPYKGALKFVKAALSVAKKGLALKLPLSFLEPCADRGAWLSANPPALCVF*RRAKYTPAQVIVGEFWGVWHNPRVDATTAGGSKLLF 727
R +PD++LDAS+ +F D L Q+PDWVV+SPPY+GAL FVKAAL+VAK+G+ALKLPLSFLEPCADR WL ANPPALC+ RA+Y PA V VGEF GVW+ P ++++ +KLLF
Sbjct: 10 RLSPDTNLDASSASFADDYLAAHNGQQPDWVVSSPPYEGALAFVKAALTVAKEGVALKLPLSFLEPCADRAVWLQANPPALCMMMSRARYQPALVRVGEFRGVWYPPGSGSSSSDSTKLLF 130 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.121.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig1.121.1 >prot_P-fluviatile_contig1.121.1 ID=prot_P-fluviatile_contig1.121.1|Name=mRNA_P-fluviatile_contig1.121.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=161bp MFPRPEQGGPVLPSLSCGSNGTLWTATTCTSDAAVEVLLHAVDISGRVLDback to top mRNA from alignment at P-fluviatile_contig1:1603176..1606071- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig1.121.1 ID=mRNA_P-fluviatile_contig1.121.1|Name=mRNA_P-fluviatile_contig1.121.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2896bp|location=Sequence derived from alignment at P-fluviatile_contig1:1603176..1606071- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig1:1603176..1606071- >mRNA_P-fluviatile_contig1.121.1 ID=mRNA_P-fluviatile_contig1.121.1|Name=mRNA_P-fluviatile_contig1.121.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=966bp|location=Sequence derived from alignment at P-fluviatile_contig1:1603176..1606071- (Porterinema fluviatile SAG_2381)back to top |