mRNA_P-fluviatile_contig1.114.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig1.114.1 vs. uniprot
Match: D8LE34_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE34_ECTSI) HSP 1 Score: 530 bits (1366), Expect = 1.310e-168 Identity = 373/684 (54.53%), Postives = 410/684 (59.94%), Query Frame = 2
Query: 305 QSDNGNTLTTDNFDADGICQPGSENTGRWTSDEHRLFLKGLELHGKGWKQIATLIQTRTVVQIRTHAQKYFQKLSKAQASGTSHLDPATLMSTMDAGKPRPSSVLRNLRSSTIVNTPGEPEERLMSLRNHRNRIRHTSHFSTMTPRQAKKDKPYPPPCHHRPTSSSMTTDXXXXXXXXXXGVGXXXXD--------GFSGEEEEMGNCVEPCREKPGTVMMIRQEAPRFTVGGGNVGAHGLHEVFQADCTSLPNDICPAGRTQRTVDARGSKLTANPQDACTGWSKRRQTPLTSDRFSPTKATKTIATTAVGGAADARALAWEAASSKSHAVGAGGALDEVAMTGTNAATFPAVTTAGNGTAAKRNRSESGSSNS---SLGDTIKSLKRTGGS-QSTRISPTSVSDIN-FMSFPVPHTERSDVAMHHLPQQLAPSWCTKPHDTWMAGAGLDIGA-DSSDAGPFRWFIDERSLSAPGAFFQPPVESWSGSDTTDASVCAGPTSDRDNGAIDVGHQTVVPE-LPVCTNKVDMSPVGAVTYDDIPTSDDVPSKRRR--IEPTVPMPVDPQADVAVSDAAIASEVSRHVEADNAT--------------------GGEGLDITSGLWLDHPQEA-----SPLMYGLGLSAPPVAG----------LGGGLSLPSLDEDEVLGFLACAE 2200
Q D+G ++DN D +G+CQPG+ENTGRWTSDEHRLFL+GLELHGKGWKQIATLIQTRTVVQIRTHAQKYFQKLSKAQASGTSHLDPATLMSTMDAGKPRP+SV RNLRSST+ N+P E E RLMSLR R XXXXXXXXXX XXXX G G E +EAP FTVGGGN GAHG + L + G + S + A T WSKRR P S R SPTKA+K A ARALAWE T KR+RSES SS+S SLG TIKSLKRTGGS Q+TRISPTSV+D+N FMSFPVP TERSD+AMHHLPQQLAPSWCTKP DTWMAGAGLD+G ++ DAGPFRWFIDERSLSAPGAFFQPPVE+WSGSDTTD S AG SD + H+TVVPE LP TNKVDMSP G +T D+ +DV + R +EP VP +SDAA+ASEVSRHVEAD+AT GG LDITSGLWLDHPQEA SPLMYGLGLSAP G GGLSLPSLDE+EVLGFLACAE
Sbjct: 6 QVDDGAASSSDNLDNEGVCQPGNENTGRWTSDEHRLFLRGLELHGKGWKQIATLIQTRTVVQIRTHAQKYFQKLSKAQASGTSHLDPATLMSTMDAGKPRPASVSRNLRSSTMANSPAESEGRLMSLRKRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGHRGVYRETALGATXXXXXXXXXRQA-EEAPAFTVGGGNSGAHGAEFDEEEAEEELDESVDVEGHNSNNKNVGISSSLLHGGTAGT-WSKRR--PAKSHRPSPTKASKAAAIAXXXXXXXARALAWEXXXXXXXXXXXXXXXXXXXXXXXXXGT-------------KRHRSESVSSSSNDASLGKTIKSLKRTGGSSQTTRISPTSVADVNSFMSFPVPQTERSDMAMHHLPQQLAPSWCTKPQDTWMAGAGLDMGGLEADDAGPFRWFIDERSLSAPGAFFQPPVETWSGSDTTDVSTSAG--SDHQH------HRTVVPEHLPSNTNKVDMSPGGVLTSDNTHNQEDVSIAKHRGMMEPIVP----------ISDAAMASEVSRHVEADSATACAAAXXXXXXXXXXXXXXDGGHSLDITSGLWLDHPQEAHEAVASPLMYGLGLSAPANTGGAXXXXXXXXXXGGLSLPSLDEEEVLGFLACAE 654
BLAST of mRNA_P-fluviatile_contig1.114.1 vs. uniprot
Match: K0S452_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S452_THAOC) HSP 1 Score: 107 bits (268), Expect = 5.670e-21 Identity = 55/81 (67.90%), Postives = 65/81 (80.25%), Query Frame = 2
Query: 371 SENTGRWTSDEHRLFLKGLELHGKGWKQIATLIQTRTVVQIRTHAQKYFQKLSKAQASGTSHLDPATLMSTMDAGKPRPSS 613
SENTGRWT++EHRLFL+GLE HGKGWK+IATLI++RTVVQIRTHAQKYFQKL+KA+ SG A +ST +A P S
Sbjct: 307 SENTGRWTAEEHRLFLQGLERHGKGWKKIATLIKSRTVVQIRTHAQKYFQKLAKARQSGAVDGHAALGVSTAEAHDGPPGS 387
BLAST of mRNA_P-fluviatile_contig1.114.1 vs. uniprot
Match: A0A8J9S9N3_PHATR (Hypothetical protein (Fragment) n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9S9N3_PHATR) HSP 1 Score: 105 bits (261), Expect = 6.900e-21 Identity = 54/84 (64.29%), Postives = 66/84 (78.57%), Query Frame = 2
Query: 302 SQSDNGNTLTTDNFDADGICQPGS--ENTGRWTSDEHRLFLKGLELHGKGWKQIATLIQTRTVVQIRTHAQKYFQKLSKAQASG 547
S+S +T D A G GS ENTGRWT++EHRLFL+GLE HGKGWK+IA+LI++RTVVQIRTHAQKYFQKL+KA+ +G
Sbjct: 89 SKSKQNSTPPVDMATASGSASQGSHGENTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNG 172
BLAST of mRNA_P-fluviatile_contig1.114.1 vs. uniprot
Match: A0A7S0GFF0_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GFF0_9STRA) HSP 1 Score: 108 bits (270), Expect = 1.310e-20 Identity = 51/67 (76.12%), Postives = 59/67 (88.06%), Query Frame = 2
Query: 347 ADGICQPGSENTGRWTSDEHRLFLKGLELHGKGWKQIATLIQTRTVVQIRTHAQKYFQKLSKAQASG 547
A + GSENTGRWT+DEHRLFL GLELHGKGWK+IA LI++RTVVQIRTHAQKYFQKL+KA+ +G
Sbjct: 33 ASSVPGAGSENTGRWTADEHRLFLHGLELHGKGWKKIACLIKSRTVVQIRTHAQKYFQKLAKARQNG 99
BLAST of mRNA_P-fluviatile_contig1.114.1 vs. uniprot
Match: D7G656_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G656_ECTSI) HSP 1 Score: 105 bits (262), Expect = 4.030e-20 Identity = 60/95 (63.16%), Postives = 70/95 (73.68%), Query Frame = 2
Query: 374 ENTGRWTSDEHRLFLKGLELHGKGWKQIATLIQTRTVVQIRTHAQKYFQKLSKAQASGTSHLDPATLMSTMDAGKPRPSSVLRN----LRSSTIV 646
+NTGRWT DEHRLFL+GLELHGKGWK+IA+LI+TRTVVQIRTHAQKYFQK++KA+ +G H D A M + G R S R LR ST V
Sbjct: 4 KNTGRWTYDEHRLFLRGLELHGKGWKKIASLIKTRTVVQIRTHAQKYFQKIAKAKQNGE-HGDVA--MDSKGHGSRRKSRGRRRMEDLLRGSTAV 95
BLAST of mRNA_P-fluviatile_contig1.114.1 vs. uniprot
Match: A0A1E7FR15_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FR15_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 4.450e-20 Identity = 43/54 (79.63%), Postives = 51/54 (94.44%), Query Frame = 2
Query: 386 RWTSDEHRLFLKGLELHGKGWKQIATLIQTRTVVQIRTHAQKYFQKLSKAQASG 547
RWTS+EH LFL+GLELHGKGWK+IA LI++RTVVQIRTHAQKYFQKL+KA+ +G
Sbjct: 1 RWTSEEHNLFLQGLELHGKGWKKIAGLIKSRTVVQIRTHAQKYFQKLAKAKQNG 54
BLAST of mRNA_P-fluviatile_contig1.114.1 vs. uniprot
Match: A0A6U4FI15_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4FI15_9STRA) HSP 1 Score: 105 bits (261), Expect = 7.200e-20 Identity = 48/60 (80.00%), Postives = 55/60 (91.67%), Query Frame = 2
Query: 368 GSENTGRWTSDEHRLFLKGLELHGKGWKQIATLIQTRTVVQIRTHAQKYFQKLSKAQASG 547
G ENTGRW+ +EHRLFLKGLE+HGKGWK+IA LI+TRTVVQIRTHAQKYFQKL+KA+ G
Sbjct: 27 GKENTGRWSYEEHRLFLKGLEMHGKGWKKIAELIKTRTVVQIRTHAQKYFQKLAKAKQGG 86
BLAST of mRNA_P-fluviatile_contig1.114.1 vs. uniprot
Match: A0A6H5L4H1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4H1_9PHAE) HSP 1 Score: 108 bits (269), Expect = 7.670e-20 Identity = 62/98 (63.27%), Postives = 71/98 (72.45%), Query Frame = 2
Query: 365 PGSENTGRWTSDEHRLFLKGLELHGKGWKQIATLIQTRTVVQIRTHAQKYFQKLSKAQASGTSHLDPATLMSTMDAGKPRPSSVLRN----LRSSTIV 646
P ENTGRWT DEHRLFL+GLELHGKGWK+IA+LI+TRTVVQIRTHAQKYFQK++KA+ +G H D A M + G R S R LR ST V
Sbjct: 569 PVKENTGRWTYDEHRLFLRGLELHGKGWKKIASLIKTRTVVQIRTHAQKYFQKIAKAKQNGE-HGDVA--MDSKGHGSRRKSRGRRRMEDLLRGSTAV 663
BLAST of mRNA_P-fluviatile_contig1.114.1 vs. uniprot
Match: B7GAW9_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GAW9_PHATC) HSP 1 Score: 105 bits (262), Expect = 1.180e-19 Identity = 60/110 (54.55%), Postives = 75/110 (68.18%), Query Frame = 2
Query: 251 TSNIFGALAKLSADRGMS---------QSDNGNTLTTDNFDADGICQPGS--ENTGRWTSDEHRLFLKGLELHGKGWKQIATLIQTRTVVQIRTHAQKYFQKLSKAQASG 547
T F AL+++S R S +S +T D A G GS ENTGRWT++EHRLFL+GLE HGKGWK+IA+LI++RTVVQIRTHAQKYFQKL+KA+ +G
Sbjct: 63 TPTKFPALSEVSHRRSASVSTAHSVTSKSKQNSTPPVDMATASGSASQGSHGENTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNG 172
BLAST of mRNA_P-fluviatile_contig1.114.1 vs. uniprot
Match: A0A7S2FCS8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FCS8_9STRA) HSP 1 Score: 100 bits (249), Expect = 1.210e-19 Identity = 45/61 (73.77%), Postives = 53/61 (86.89%), Query Frame = 2
Query: 365 PGSENTGRWTSDEHRLFLKGLELHGKGWKQIATLIQTRTVVQIRTHAQKYFQKLSKAQASG 547
P ENTGRWT +EH +FL GL++HGKGWK IA +I+TRTVVQIRTHAQKYFQKL+KAQ +G
Sbjct: 119 PNKENTGRWTIEEHTMFLDGLKVHGKGWKDIAKMIKTRTVVQIRTHAQKYFQKLAKAQQNG 179 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.114.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig1.114.1 >prot_P-fluviatile_contig1.114.1 ID=prot_P-fluviatile_contig1.114.1|Name=mRNA_P-fluviatile_contig1.114.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=644bp MSQSDNGNTLTTDNFDADGICQPGSENTGRWTSDEHRLFLKGLELHGKGWback to top mRNA from alignment at P-fluviatile_contig1:1560685..1568820- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig1.114.1 ID=mRNA_P-fluviatile_contig1.114.1|Name=mRNA_P-fluviatile_contig1.114.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=8136bp|location=Sequence derived from alignment at P-fluviatile_contig1:1560685..1568820- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig1:1560685..1568820- >mRNA_P-fluviatile_contig1.114.1 ID=mRNA_P-fluviatile_contig1.114.1|Name=mRNA_P-fluviatile_contig1.114.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3864bp|location=Sequence derived from alignment at P-fluviatile_contig1:1560685..1568820- (Porterinema fluviatile SAG_2381)back to top |