mRNA_P-fluviatile_contig1.105.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig1.105.1
Unique NamemRNA_P-fluviatile_contig1.105.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig1.105.1 vs. uniprot
Match: D8LE25_ECTSI (Centrosomal protein of 70 kDa n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE25_ECTSI)

HSP 1 Score: 550 bits (1416), Expect = 2.370e-175
Identity = 361/698 (51.72%), Postives = 440/698 (63.04%), Query Frame = 2
Query: 1601 TSGQVRLLSGATDQPIWPCSSPDQPSPMKPRQECKSGRHVCLDPFK*RPLMHFTVLWPECFLGSTYGQRPEVLCFSVLGVVFPR*EIRAFHPLTDTRSCFRLSRSSPRTNIFGREAELFE---RATTSDHRSENGKPDASLAEANARVSGAAEADHKDSGKEATES-----------SAR-----YTSFEKMPPPLNEESPWEALNSSLRDQGFSGVLLTRPGGSVAIPDPTSITDTLRNVLLKYVEREEIIQEMSLELQRQSNMSGHRESVLNDSFRREKSDLFRRSAGAEGRVAALEEENKRLRDQLATQIRRTKTENASLQSQLKQSEHRVKATEIAAQKLMDKLQDEAHSDRQSQQRERALLMKLQQRKIRC--------RSGAKESKVVESLIAHMKAQERSDAELDMLRAEVSRLGDELRERENIIRRHRLGLDWTPDLNQSVKRTLASDELRDLRDRLTEAERSVGIMKQRERRAKERCSDMETXXXXXXXXXXXXQEALANAQIELTSQPSLRSWRASQRRIKDLEEKLGQATNQVKEAVVVAELRRWVDTGELMRRDRGNYRLKLDRLDNLPTSVLKQVVQDACRLLALQDVSLLSSSVSKLIRAVQMLPRLERFANSVCSYVFQRSH-----------ASWVAGRARTMEDVLPLLEHWIAR---PDSQEAFQQELMTVLETRVGGSQ 3571
            +SG   L+S AT QPIWP  + DQPSP++  ++ +S R    D           +L        +             G  FP   I        TR+   +  +   T+  G E ++ E   R TT   R   G                AEAD + SGKEAT+S           SAR     Y      PP  NE SPW+ALN SLR+QGF  V L+RPGGS+A+PDPTS+ DTLR+V+ K+ ER   IQEMSLELQR+ N+ GHRESVLN+SFRRE+SDL +RSAGAE R AALE ENKRL+DQLA   RR + E+A                        DKLQ+EA  +R SQQRERA+L K +Q++             GA +S+V ESLIAH KAQERS+AE+D LRAE+SRLGDELRE+EN I +HRLG DWTPDL+  V    +SDELR+LRDRL E+ERSV +MKQRE RA ERC+ ME             Q+AL NA++EL+S+PSLR+WRASQRRI+DLE +LGQAT+Q KEA+ VAELRRWVDT ELMRRDRGN+RLKLDRL+ LPT+VLKQVVQDACRLL+LQDVSLL SSVSKLI+AVQMLPRLERF NSVC +VF+ S            +  +AG+ARTMEDVLPLLE W+AR   P   + F + ++ VLETR G SQ
Sbjct:   68 SSGDEELVSAATGQPIWPSLAQDQPSPIQAPRDTRSPRADGYD-------READLLESAHASDDSXXXXXXXXXARGAGADFPLAAIA-------TRA---VEEARVETDSCGYEGDVGEGARRMTTPSFRRATGIAPPGFPS----NKDGAEADDEASGKEATKSHVPQQPASLDMSARGMISHYGGGRLNPPQTNEGSPWDALNESLREQGFREVSLSRPGGSIAVPDPTSLADTLRDVVFKHGERGRAIQEMSLELQRRDNVGGHRESVLNESFRRERSDLSKRSAGAEARAAALEAENKRLQDQLALDSRRARAESAXXXXXXXXXXXXXXXXXXXXXXXXDKLQEEAEKERLSQQRERAILTKFRQKEAAAVVAVRGSGGGGANDSRVAESLIAHSKAQERSEAEMDKLRAEISRLGDELREKENTILKHRLGPDWTPDLDPKVA-PASSDELRELRDRLVESERSVRVMKQRETRALERCASMEKECAEVQAKADETQDALVNARLELSSRPSLRNWRASQRRIQDLETRLGQATSQAKEAMDVAELRRWVDTRELMRRDRGNHRLKLDRLEELPTAVLKQVVQDACRLLSLQDVSLLGSSVSKLIKAVQMLPRLERFVNSVCGFVFRHSTEVLSAPSDGMLSQSLAGKARTMEDVLPLLELWLARAQEPVKLKEFHRGVLRVLETRAGESQ 743          
BLAST of mRNA_P-fluviatile_contig1.105.1 vs. uniprot
Match: A0A6H5KZU1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZU1_9PHAE)

HSP 1 Score: 411 bits (1056), Expect = 2.590e-126
Identity = 281/546 (51.47%), Postives = 348/546 (63.74%), Query Frame = 2
Query: 1601 TSGQVRLLSGATDQPIWPCSSPDQPSPMKPRQECKSGRHVCLDPFK*RPLMHFTVLWPECFLGSTYGQRPEVLCFSVLGVVFPR*EIRAFHPLTDTRSCFRLSRSSPRTNIFGREAELFE---RATTSDHRSENGKPDASLAEANARVS-GAAEADHKDSGKEATES-----------SAR-YTSFEKM----PPPLNEESPWEALNSSLRDQGFSGVLLTRPGGSVAIPDPTSITDTLRNVLLKYVEREEIIQEMSLELQRQSNMSGHRESVLNDSFRREKSDLFRRSAGAEGRVAALEEENKRLRDQLATQIRRTKTENASLQSQLKQSEHRVKATEIAAQKLMDKLQDEAHSDRQSQQRERALLMKLQQRKIRC--------RSGAKESKVVESLIAHMKAQERSDAELDMLRAEVSRLGDELRERENIIRRHRLGLDWTPDLNQSVKRTLASDELRDLRDRLTEAERSVGIMKQRERRAKERCSDMETXXXXXXXXXXXXQEALANAQIELTSQPSLRSWRASQRRIKDLEEKLGQATNQVK 3154
            +SG   L+S AT QPIWP  + DQPSP++  +   S R    D  +   L+       E    S           +  G  FP   I        TR+   +  +   T+  G E ++ E   R TT   R   G     +A     V+   AEAD + SGKEAT+S           SAR  TS  ++    PP  NE SPW+ALN SLR+QGF  V L+RPGGS+A+PDPTS+ DTLR+V+ K+ ER  +IQEMSLELQR+ N+ GHRESVLN+SFRRE+SDL +RSAGAE R AALE ENKRL+DQLA   RR + E+AS   QLKQS HRVKA E AAQ+LMDKLQ+EA  +R SQQRERA+L K +Q++             GA +S+V ESL+AH KAQERS+AE+D LRAEVSRLGDELRE+EN I +HRLG DWTPDL+  V    +SDELR+LRDRL E+ERSV +MKQRE RA ERC+ ME             Q+AL NA++EL+S+PSLR+WRASQRRI+DLE KLGQAT+Q K
Sbjct:   68 SSGDEELVSAATGQPIWPSLAQDQPSPIQAPRGTVSPRADGYD--READLL-------ESAHASNDSSEXXXXXXARAGTDFPLAAIA-------TRA---VEEARVETDSCGYEGDVGEGAKRMTTPSFRRAAG-----IAPPGFSVNKDGAEADDEASGKEATKSLVPQQPASLDMSARGMTSHYRVGRVNPPQTNEGSPWDALNESLREQGFREVSLSRPGGSIAVPDPTSLADTLRDVVFKHGERGRVIQEMSLELQRRDNVGGHRESVLNESFRRERSDLSKRSAGAEARAAALEAENKRLQDQLALDSRRARAESASXXXQLKQSXHRVKAKEAAAQRLMDKLQEEAEKERLSQQRERAILAKFRQKEAAAVVAVRGSGGGGANDSRVAESLMAHSKAQERSEAEMDKLRAEVSRLGDELREKENTILKHRLGPDWTPDLDPKVA-PASSDELRELRDRLAESERSVRVMKQREARALERCASMEKECAEVQAKADETQDALVNARLELSSRPSLRNWRASQRRIQDLETKLGQATSQAK 588          
BLAST of mRNA_P-fluviatile_contig1.105.1 vs. uniprot
Match: A0A6H5KY74_9PHAE (Centrosomal protein of 70 kDa n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY74_9PHAE)

HSP 1 Score: 159 bits (402), Expect = 9.360e-40
Identity = 89/136 (65.44%), Postives = 104/136 (76.47%), Query Frame = 2
Query: 3206 MRRDRGNYRLKLDRLDNLPTSVLKQVVQDACRLLALQDVSLLSSSVSKLIRAVQMLPRLERFANSVCSYVFQRSH-----------ASWVAGRARTMEDVLPLLEHWIAR---PDSQEAFQQELMTVLETRVGGSQ 3571
            MRRDRGN+RLKLDRL+ LPT+VLKQVVQDACRLL+LQDVSLL SSVSKLI+AVQMLPRLERF NSVC +VF+ S            +  +AG+ARTMEDVLPLLE W+AR   P   + F + ++ VLETR G SQ
Sbjct:    1 MRRDRGNHRLKLDRLEELPTAVLKQVVQDACRLLSLQDVSLLGSSVSKLIKAVQMLPRLERFVNSVCGFVFRHSTEVLSASSDGMLSQALAGKARTMEDVLPLLELWLARAQEPVKLKEFHRGVLRVLETRAGESQ 136          
BLAST of mRNA_P-fluviatile_contig1.105.1 vs. uniprot
Match: A0A5D6XQF4_9STRA (Centrosomal protein of 70 kDa n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XQF4_9STRA)

HSP 1 Score: 169 bits (427), Expect = 7.640e-39
Identity = 148/521 (28.41%), Postives = 251/521 (48.18%), Query Frame = 2
Query: 2147 WEALNSSLRDQGFSGVLLTRPG---------GSVAIPDPTSITDTLRNVLLKYVEREEIIQEMSLELQRQSNMSGHRESVLNDSFRR-EKSDLFRRSAGAEGRVAALEEENKRLRDQLATQIRRTKTENASLQSQLKQSEHRVKATEIAAQKLMDKLQDEAHSDRQSQQRERALLMKLQQRKIRCRSGAKESKVVESLIAHMKAQERSDAELDMLRAEVSRLGDELRERENIIRRHRLGL----------DWTPDLNQSVKR------------------------TLASDELRDLRDRLTEAERSVGIMKQRERRAK--ERCSDMETXXXXXXXXXXXXQEALANAQIELTSQPSLRSWRASQRRIKDLEEKLGQATNQVKEAVVVAELRRWVDTGELMRRDRGNYRLKLDRLDNLPTSVLKQVVQDACRLLALQDVSLLSSSVSKLIRAVQMLPRLERFANSVCSYVFQRSHASWVAGRART--------MEDVLPLLEHWIARPDSQEAFQQELMTVL 3547
            W  LN SLR  G   +   +           G V +PD  SI + +++V+L+   +++IIQ++ LE  R S      E  L  + ++ E +     SA  E  +  L++  K+  +     ++  K  +  LQ QLK SEHRVKA E+  +++  KLQ +A  +  S+ R++ +  +LQQR  + ++ A++S+ +E +  +   +E+   E+D L+ +V+ L  ELR++EN I R   G           D   D +                             ++ SD++   R      E+ +   K R R A   +R  ++E             +E  AN  +E  S+PS+R +R SQRRI  LE ++ ++   ++EA  + ELRR++ T  L+ RDR ++RL L+RL+ LP     +VV++ CR+L L D++ +S S+ KL R V  +PR+E+F   VC +VF         G            +E VLP L+HW +      A ++  +T++
Sbjct:  275 WIDLNDSLRKHGLQPIAFEKVDARSLRADALGHVTLPDRESIANLVQDVVLQLERKDQIIQDIILESNRNSREQSRAEGSLQTAEKKHEAAQKALESARVE--ITRLQDALKKSNEAHDEHVKHLKQTSLHLQQQLKVSEHRVKAKEVLVERMQLKLQQQADRESLSKARDQRVFRQLQQRDAK-KTSARDSQALEFIGMYEAQREQLQEEIDHLKTQVAALSAELRDKENYIARKASGAATQRAKAAWGDGDSDASDXXXXXXXXXXXXXXXXXXXXXXXXXRPASVVSDDMMLERLEAARREQELAATKLRRREAAMIKRVGEIEHELLAARDAVSELKEENANLALEAESRPSIRDYRLSQRRIHQLERQVAESKLALQEATDLHELRRYMGTKALVERDRLDHRLHLNRLNALPRETTLEVVKEVCRVLNLTDITRISPSLEKLCRVVAAVPRMEKFIRDVCGFVFLSGATPAADGTGADPDADPHFELERVLPTLQHWSSERRRLHALEEFQVTIV 792          
BLAST of mRNA_P-fluviatile_contig1.105.1 vs. uniprot
Match: A0A024TK55_9STRA (Centrosomal protein of 70 kDa n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TK55_9STRA)

HSP 1 Score: 157 bits (398), Expect = 8.560e-36
Identity = 134/458 (29.26%), Postives = 237/458 (51.75%), Query Frame = 2
Query: 2057 HKDSGKEATESSARYTSFEKMPPPLNEESP---WEALNSSLRDQGFSGVLLTRPGGSVAIPDPTSITDTLRNVLLKYVEREEIIQEMSLELQRQSNMSGHRESVLNDSFRREKSDLFRRSAGAEGRVAALEEENKRLRDQLATQIRRTKTENASLQSQLKQSEHRVKATEIAAQKLMDKLQDEAHSDRQSQQRERALLMKLQQRKIRCRSGAKESKVVESLIAHMKAQERSDAELDMLRAEVSRLGDELRERENIIRRHRLGLDWTPDLNQSVKRTLASDELRDLRDRLTEAERSVGIMKQRERRAKERCSDMETXXXXXXXXXXXXQEALANAQIELTSQPSLRSWRASQRRIKDLEEKLGQATNQVKEAVVVAELRRWVDTGELMRRDRGNYRLKLDRLDNLPTSVLKQVVQDACRLLALQDVSLLSSSVSKLIRAVQMLPRLERFANSVCSYVFQ 3421
            H+ S   +  S  R+      PP +++++P   W  LN+ L   GFS + L  P  +  IP   ++   + +++++   R +IIQ++ L+    +      E+ L  S   + +D+      ++G V +L+ E  R   +L ++ +  K + + L+ QLK SEHRVKA E   ++L  K Q     +  S+ R R +   +QQR  R +S A + K +E +  +   +E+  AE+  LR++V  L  ++R++EN++ R           N   +R    ++L   R    E E+S   ++ +E   +E+ + +E             ++  AN  +E+ S+P++R ++A QRR+  LE +L      V++A  + +LR+++ T EL+ RD+ N +L L+RL  LP      V+QD CR L L DV+L+  SV+KLI  VQ +PR+E+F + VC  + Q
Sbjct:  133 HESSRTNSHMSEPRFGQSSVAPPSMDQDTPDNEWRPLNTLLAQHGFSPIELI-PTSTGVIPKMDALFAVVHDLIVQLERRGQIIQDLVLDSDLHAKKHAKAETHL-ASHEMKITDVTEALERSQGEVQSLKTELMRATAKLESEQKAFKLQKSKLEQQLKISEHRVKAKEGLLERLQHKFQQVMDKEDVSKTRTREVFRTIQQRDPR-KSSAADLKSLELIAMYETEREKMTAEIAQLRSQVQELCCDVRDKENVLLRQ-------TGANGFTQRDAFVEKLEQAR---LEQEQSSRQLRHKEAIIQEKVNKIEIELRHSKDIIADLRDENANLILEVQSRPTIRDYKAIQRRVVLLERQLSDQKAAVQDAHTLEDLRKYMGTAELIHRDKVNAKLHLNRLTTLPKEACLDVIQDICRQLDLTDVTLIGPSVAKLISVVQAVPRMEKFIHGVCGCISQ 577          
BLAST of mRNA_P-fluviatile_contig1.105.1 vs. uniprot
Match: A0A024TK51_9STRA (Centrosomal protein of 70 kDa n=4 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TK51_9STRA)

HSP 1 Score: 157 bits (398), Expect = 1.100e-35
Identity = 134/458 (29.26%), Postives = 237/458 (51.75%), Query Frame = 2
Query: 2057 HKDSGKEATESSARYTSFEKMPPPLNEESP---WEALNSSLRDQGFSGVLLTRPGGSVAIPDPTSITDTLRNVLLKYVEREEIIQEMSLELQRQSNMSGHRESVLNDSFRREKSDLFRRSAGAEGRVAALEEENKRLRDQLATQIRRTKTENASLQSQLKQSEHRVKATEIAAQKLMDKLQDEAHSDRQSQQRERALLMKLQQRKIRCRSGAKESKVVESLIAHMKAQERSDAELDMLRAEVSRLGDELRERENIIRRHRLGLDWTPDLNQSVKRTLASDELRDLRDRLTEAERSVGIMKQRERRAKERCSDMETXXXXXXXXXXXXQEALANAQIELTSQPSLRSWRASQRRIKDLEEKLGQATNQVKEAVVVAELRRWVDTGELMRRDRGNYRLKLDRLDNLPTSVLKQVVQDACRLLALQDVSLLSSSVSKLIRAVQMLPRLERFANSVCSYVFQ 3421
            H+ S   +  S  R+      PP +++++P   W  LN+ L   GFS + L  P  +  IP   ++   + +++++   R +IIQ++ L+    +      E+ L  S   + +D+      ++G V +L+ E  R   +L ++ +  K + + L+ QLK SEHRVKA E   ++L  K Q     +  S+ R R +   +QQR  R +S A + K +E +  +   +E+  AE+  LR++V  L  ++R++EN++ R           N   +R    ++L   R    E E+S   ++ +E   +E+ + +E             ++  AN  +E+ S+P++R ++A QRR+  LE +L      V++A  + +LR+++ T EL+ RD+ N +L L+RL  LP      V+QD CR L L DV+L+  SV+KLI  VQ +PR+E+F + VC  + Q
Sbjct:  133 HESSRTNSHMSEPRFGQSSVAPPSMDQDTPDNEWRPLNTLLAQHGFSPIELI-PTSTGVIPKMDALFAVVHDLIVQLERRGQIIQDLVLDSDLHAKKHAKAETHL-ASHEMKITDVTEALERSQGEVQSLKTELMRATAKLESEQKAFKLQKSKLEQQLKISEHRVKAKEGLLERLQHKFQQVMDKEDVSKTRTREVFRTIQQRDPR-KSSAADLKSLELIAMYETEREKMTAEIAQLRSQVQELCCDVRDKENVLLRQ-------TGANGFTQRDAFVEKLEQAR---LEQEQSSRQLRHKEAIIQEKVNKIEIELRHSKDIIADLRDENANLILEVQSRPTIRDYKAIQRRVVLLERQLSDQKAAVQDAHTLEDLRKYMGTAELIHRDKVNAKLHLNRLTTLPKEACLDVIQDICRQLDLTDVTLIGPSVAKLISVVQAVPRMEKFIHGVCGCISQ 577          
BLAST of mRNA_P-fluviatile_contig1.105.1 vs. uniprot
Match: A0A3R6ZXS0_9STRA (Centrosomal protein of 70 kDa n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6ZXS0_9STRA)

HSP 1 Score: 148 bits (374), Expect = 3.870e-33
Identity = 142/487 (29.16%), Postives = 248/487 (50.92%), Query Frame = 2
Query: 2096 RYTSFEKMPPPLNEESPWEALNSSLRDQGFSGVLLTRPGGSVAIPDPTSITDTLRNVLLKYVEREEIIQEMSLE--------LQRQSNMSGHRESVLNDSFRREKSDLFRRSAGAEGRVAALEEENKRLRDQLATQIRRTKTENASLQSQLKQSEHRVKATEIAAQKLMDKLQDEAHSDRQSQQRERALLMKLQQRKIRCRSGAKESKVVESLIAHMKAQERSDAELDMLRAEVSRLGDELRERENIIRRHRLGLDWTPDLNQS--VKRTLASDELRDLRDRLTEAERSVGIMKQRERRAKERCSDMETXXXXXXXXXXXXQEALANAQIELTSQPSLRSWRASQRRIKDLEEKLGQATNQVKEAVVVAELRRWVDTGELMRRDRGNYRLKLDRLDNLPTSVLKQVVQDACRLLALQDVSLLSSSVSKLIRAVQMLPRLERFANSVCSYVFQRSHASWVAGRARTMEDVLPLLEHWIARPDSQEAFQ 3526
            R T    + P  + ES W  LNS L   GFS V L  P  +  +P   ++   + +++ +   R +IIQ++ L+         + +++++   + V N +   E+S L  +S   +   A+ + ++    DQ A ++++TK     L+ QLK SEHRVKA E    +L  KLQ     D  ++ R R +   +  R+ R R+ A + K +E +  +   +++ + E+  L+++V  L  ++R++EN++ R     +  P   +   V+R  A+        RL E E+S   ++Q+E   +++ + ++             ++  AN  +E+ S+PS+R ++A+QRR+  LE +L      V  A  + +LR+++ T EL+ RD+ N +L L+RL  LP     +V+QD CR L L DV+L+  SV+KLI  V  +PR+E+F   VC+ V Q S A         +E V+P L  W    D  E+ Q
Sbjct:   67 RPTEASAVHPSTSSESAWRPLNSLLAQHGFSPVELV-PTATGLLPKMDALYGVVHDLISQLERRGQIIQDLVLDSDINAKKQTKVETSLASSGKHVANVTDALERSQLEVQSLKTQLERASAKADS----DQKAYKLQKTK-----LEQQLKMSEHRVKAKEALVDRLQVKLQQVTDKDAAAKSRTRHVFRDIHMREPR-RTSAADVKALELIAMYEHDRDKMEGEIRSLQSQVQELCCDVRDKENVLLRQ--SSNGLPKHREDAFVERLEAA--------RL-EQEQSARKLRQQEALIQDKVAKIDADLRASKQVVADLRDENANLHLEVQSRPSIRDYKATQRRVMLLERQLHDQQVAVTHANTLDDLRQYMGTAELIYRDKQNAKLHLNRLSTLPKEACLEVMQDICRQLDLTDVTLIGPSVAKLISVVHAVPRMEKFIRDVCACV-QPSAA---------IEKVIPTLTKWKQNLDQLESLQ 521          
BLAST of mRNA_P-fluviatile_contig1.105.1 vs. uniprot
Match: A0A2R5GSP8_9STRA (Centrosomal protein of 70 kDa n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GSP8_9STRA)

HSP 1 Score: 148 bits (374), Expect = 1.900e-32
Identity = 143/515 (27.77%), Postives = 238/515 (46.21%), Query Frame = 2
Query: 2129 LNEESPWEALNSSLRDQGFSGVLLTRPGGSVAIPDPTSITDTLRNVLLKYVEREEIIQEMSLELQRQSNMSGHRESVLNDSFRREKSDLFRRSAGAEGRVAALEEENKRLRDQLATQIRRTKTENASLQSQLKQSEHRVKATEIAAQKLMDKLQDEAHSDRQSQQRERALLMKLQQRKIRCRSGAKESKVVESLIAHMKAQERSDAELDMLRAEVSRLGDELRERENIIRRHRLG-LDWTPDLNQSVKRTLASDELRDLRDRLTEAERSVGIMKQRERRAKERCSDMETXXXXXXXXXXXXQEALANAQIELTSQPSLRSWRASQRRIKDLEEKLGQATNQVKEAVV-------------------------------------------------VAELRRWVDTGELMRRDRGNYRLKLDRLDNLPTSVLKQVVQDACRLLALQDVSLLSSSVSKLIRAVQMLPRLERFANSVCSYVF--------QRSHASWVAG-RARTMEDVLPLLEHWI 3496
            + E+  WE +N +L+  GF  + +   GG    P+P ++   LR++L +Y  R E+I+E+++E            S L  S RRE + L  R  GA+  V   +++        A Q+R  + ENA+LQ +L  SEHRV+A E   +++  KL  EA      ++R RA+   + +R  R  S   + K+++ + A    +     E D+L AEV RL   L +REN +   R   LD        ++R+L    LR  RD   +   S   M +RER    + S +E              + + N ++EL S+P++R W+A+QRRI  LE ++  A   ++E+ +                                                  ++ RR   T EL+RRD+ N+RL L RL  LP +   +++Q+ CR+L L DV L+  ++ K+   V+ +PRLERFA  +  +V         + +    VA   + +++ +LP L+ W+
Sbjct:  346 MAEDDIWERMNRALQQAGFGAINMRDVGG----PEPGAMLSQLRSILAQYHRRGEMIEELTMEESSSKRTDEELYSKLEQS-RREVARLQERLKGAQAEVREAQDKQSATHRGDAEQVRALQRENAALQQKLSLSEHRVRAKEGEMERMHKKLATEARHTATQRERTRAVFRDVAKRDPRAASQT-DQKLLDIVEAFETERRELHEERDLLNAEVRRLNHALEDRENELNGSRASSLD-------EIERSL----LRKARDVEADQRVSREAMDRRERAIIAKLSKLEGQLAEARRAEQRAADHVENLKLELASRPTMRDWKAAQRRITKLEAQVQSAVEALEESEIDEARRNNIFVARPSRGGAGNGDTRRSQADGDHLSPRDRVELMAKRALAEASDNRRRTSTAELIRRDKLNHRLGLSRLTALPKTAAHEILQEICRILELADVDLIVPALQKMCWVVRAMPRLERFAKDISGFVLLHGDDLLRETAQDPSVANPTSASLQAILPQLKRWV 843          
BLAST of mRNA_P-fluviatile_contig1.105.1 vs. uniprot
Match: W4FG47_9STRA (Centrosomal protein of 70 kDa n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FG47_9STRA)

HSP 1 Score: 146 bits (368), Expect = 2.530e-32
Identity = 140/477 (29.35%), Postives = 246/477 (51.57%), Query Frame = 2
Query: 2123 PPLNEESPWEALNSSLRDQGFSGVLLTRPGGSVAIPDPTSITDTLRNVLLKYVEREEIIQEMSLE--------LQRQSNMSGHRESVLNDSFRREKSDLFRRSAGAEGRVAALEEENKRLRDQLATQIRRTKTENASLQSQLKQSEHRVKATEIAAQKLMDKLQDEAHSDRQSQQRERALLMKLQQRKIRCRSGAKESKVVESLIAHMKAQERSDAELDMLRAEVSRLGDELRERENII-RRHRLGLDWTPDLNQSVKRTLASDELRDLRDRLTEAERSVGIMKQRERRAKERCSDMETXXXXXXXXXXXXQEALANAQIELTSQPSLRSWRASQRRIKDLEEKLGQATNQVKEAVVVAELRRWVDTGELMRRDRGNYRLKLDRLDNLPTSVLKQVVQDACRLLALQDVSLLSSSVSKLIRAVQMLPRLERFANSVCSYVFQRSHASWVAGRARTMEDVLPLLEHWIARPDSQEAFQ 3526
            P  + ES W  LNS L   GFS V L  P  +  +P   ++   + +++ +   R +IIQ++ L+         + +++++   + V N +   E+S L  +S   +   A+ + ++    DQ A ++++TK     L+ QLK SEHRVKA E    +L  KLQ     D  ++ R R +   +  R+ R R+ A + K +E +  +   +++   E+  L+++V  L  ++R++EN++ R+   GL    + +  V+R  A+        RL E E+S   ++Q+E   +++ + ++             ++  AN  +E+ S+PS+R ++A+QRR+  LE +L      V  A  + +LR+++ T EL+ RD+ N +L L+RL  LP     +V+QD CR L L DV+++  SV+KLI  V  +PR+E+F   VC+ V Q S A         +E V+P L  W    D  E+ Q
Sbjct:   40 PSTSSESAWRPLNSLLAQHGFSPVELV-PTATGVLPKMDALYGVVHDLISQLERRGQIIQDLVLDSDINAKKQTKIETSLASSGKHVANVTDALERSQLEVQSLKTQLERASAKADS----DQKAYKLQKTK-----LEQQLKMSEHRVKAKEALVDRLQVKLQQVTDKDAAAKSRTRHVFRDIHMREPR-RTSAADVKALELIAMYEHDRDKMAGEIRSLQSQVQELCCDVRDKENVLLRQSSNGLPKNRE-DAFVERLEAA--------RL-EQEQSARKLRQQEALIQDKVAKIDADLRASKQVVADLRDENANLHLEVQSRPSIRDYKATQRRVMLLERQLHDQQVAVTHANTLDDLRQYMGTAELIYRDKQNAKLHLNRLSTLPKEACLEVMQDICRQLDLTDVTMIGPSVAKLISVVHAVPRMEKFIRDVCACV-QPSAA---------IEKVVPTLTKWKQNLDQLESLQ 485          
BLAST of mRNA_P-fluviatile_contig1.105.1 vs. uniprot
Match: A0A3M6VLH7_9STRA (Centrosomal protein of 70 kDa n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VLH7_9STRA)

HSP 1 Score: 148 bits (373), Expect = 2.630e-32
Identity = 143/516 (27.71%), Postives = 238/516 (46.12%), Query Frame = 2
Query: 2045 AEADHKDSGKEATESSARYTSFEKMPPPLNEES------PWEALNSSLRDQGFSGVLLTRPGGSVAIPDPTSITDTLRNVLLKYVEREEIIQEMSLELQRQSNMSGHRESVLNDSFRREKSDLFRRSAGAEGRVAALEEENKRLRDQLATQIRRTKTENASLQSQLKQSEHRVKATEIAAQKLMDKLQDEAHSDRQSQQRERALLMKLQQRKIRCRSGAKESKVVESLIAHMKAQERSDAELDMLRAEVSRLGDELRERENIIRRH-RLGLD-----WTPDLNQS------------------VKRTLASDE--LRDLRDRLTEAERSVGIMKQRERRAKERCSDMETXXXXXXXXXXXXQEALANAQIELTSQPSLRSWRASQRRIKDLEEKLGQATNQVKEAVVVAELRRWVDTGELMRRDRGNYRLKLDRLDNLPTSVLKQVVQDACRLLALQDVSLLSSSVSKLIRAVQMLPRLERFANSVCSYV-FQRSHASWVAGRARTMEDVLPLLEHW 3493
            AEAD K    +  + S RYT  E       E++       W  LN  LR  G   V      GS  +PD  S+   + +  ++   +   I+++ L  QR S +   RES L  +   +  +                                       LQ QLK SEHRVKA EI  +K+  KLQ +   D  ++ R+R     LQ R  R R+  ++S+ ++++  +   +E+   E+D L+++V+ L  ELR+++N I R  R  L+     W   L++S                     ++ASDE  L  L     E E +   ++ RE    E+ + +E             +E  AN  +E  S+PS+R +R +QRRI+ LE ++ +    ++E   + ELR+++ T EL++RDR  + L L RLD+LP     +VV+  CR+L L D++L++ S+ K+   V  +PR+E+F   VC +V    +  + ++  +  +E V+P L+ W
Sbjct:  322 AEADEKKEDND--DKSTRYTPAESEQNLKREDAVVIDQGAWNGLNDLLRKNGLPAVRF-HSFGSKVLPDQESLFSVIHDFGVQLEHKNSTIEDLVLASQRNSKVRSRRESEL-QAIEMKNEETLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSCLRLQQQLKVSEHRVKAKEIIIEKMQTKLQQQVDKDTLNKMRDRRAFRNLQDRDPR-RANPRDSQTLDTIGVYEAQREQMQEEIDYLKSQVAALNSELRDKDNFIARQARASLNNEPPAWERCLDESNIGRVSVTQSRLRNNQQHESSSVASDEVMLEQLEAARREQEVTAAKLRHREAVMVEKVAMIEQELLAARETICELKEENANLSLEADSRPSIRDYRLNQRRIRQLERQIAETKLALEETSDLNELRKYMGTKELVKRDRLTHGLHLSRLDSLPRETTLEVVKHVCRVLHLTDITLIAPSLDKICSVVTAVPRMEKFIRDVCGFVSLHLNDNADISSVSFELEQVIPTLQQW 832          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.105.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
D8LE25_ECTSI2.370e-17551.72Centrosomal protein of 70 kDa n=1 Tax=Ectocarpus s... [more]
A0A6H5KZU1_9PHAE2.590e-12651.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KY74_9PHAE9.360e-4065.44Centrosomal protein of 70 kDa n=1 Tax=Ectocarpus s... [more]
A0A5D6XQF4_9STRA7.640e-3928.41Centrosomal protein of 70 kDa n=1 Tax=Pythium bras... [more]
A0A024TK55_9STRA8.560e-3629.26Centrosomal protein of 70 kDa n=2 Tax=Aphanomyces ... [more]
A0A024TK51_9STRA1.100e-3529.26Centrosomal protein of 70 kDa n=4 Tax=Aphanomyces ... [more]
A0A3R6ZXS0_9STRA3.870e-3329.16Centrosomal protein of 70 kDa n=1 Tax=Aphanomyces ... [more]
A0A2R5GSP8_9STRA1.900e-3227.77Centrosomal protein of 70 kDa n=1 Tax=Hondaea ferm... [more]
W4FG47_9STRA2.530e-3229.35Centrosomal protein of 70 kDa n=1 Tax=Aphanomyces ... [more]
A0A3M6VLH7_9STRA2.630e-3227.71Centrosomal protein of 70 kDa n=2 Tax=Peronospora ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:1428934..1434363 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score539.3
Seed ortholog evalue1.9e-150
Seed eggNOG ortholog2880.D8LE25
EggNOG OGs295A6@1,2RC83@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-05_004310.1
Exons7
Model size3669
Cds size1461
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815287.0413573-UTR-P-fluviatile_contig1:1428933..14290251622815287.0413573-UTR-P-fluviatile_contig1:1428933..1429025Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 1428934..1429025 -
1693561388.6973782-UTR-P-fluviatile_contig1:1428933..14290251693561388.6973782-UTR-P-fluviatile_contig1:1428933..1429025Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 1428934..1429025 -
1622815287.131364-UTR-P-fluviatile_contig1:1431793..14318771622815287.131364-UTR-P-fluviatile_contig1:1431793..1431877Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 1431794..1431877 -
1693561388.757246-UTR-P-fluviatile_contig1:1431793..14318771693561388.757246-UTR-P-fluviatile_contig1:1431793..1431877Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 1431794..1431877 -
1622815287.145893-UTR-P-fluviatile_contig1:1432149..14341511622815287.145893-UTR-P-fluviatile_contig1:1432149..1434151Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 1432150..1434151 -
1693561388.7645378-UTR-P-fluviatile_contig1:1432149..14341511693561388.7645378-UTR-P-fluviatile_contig1:1432149..1434151Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 1432150..1434151 -
1622815287.1576357-UTR-P-fluviatile_contig1:1434333..14343631622815287.1576357-UTR-P-fluviatile_contig1:1434333..1434363Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 1434334..1434363 -
1693561388.771842-UTR-P-fluviatile_contig1:1434333..14343631693561388.771842-UTR-P-fluviatile_contig1:1434333..1434363Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 1434334..1434363 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815287.0559897-CDS-P-fluviatile_contig1:1429025..14290851622815287.0559897-CDS-P-fluviatile_contig1:1429025..1429085Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 1429026..1429085 -
1693561388.7117407-CDS-P-fluviatile_contig1:1429025..14290851693561388.7117407-CDS-P-fluviatile_contig1:1429025..1429085Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 1429026..1429085 -
1622815287.069385-CDS-P-fluviatile_contig1:1429731..14298491622815287.069385-CDS-P-fluviatile_contig1:1429731..1429849Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 1429732..1429849 -
1693561388.721471-CDS-P-fluviatile_contig1:1429731..14298491693561388.721471-CDS-P-fluviatile_contig1:1429731..1429849Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 1429732..1429849 -
1622815287.085058-CDS-P-fluviatile_contig1:1430097..14303481622815287.085058-CDS-P-fluviatile_contig1:1430097..1430348Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 1430098..1430348 -
1693561388.729301-CDS-P-fluviatile_contig1:1430097..14303481693561388.729301-CDS-P-fluviatile_contig1:1430097..1430348Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 1430098..1430348 -
1622815287.0986216-CDS-P-fluviatile_contig1:1430549..14306661622815287.0986216-CDS-P-fluviatile_contig1:1430549..1430666Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 1430550..1430666 -
1693561388.7366228-CDS-P-fluviatile_contig1:1430549..14306661693561388.7366228-CDS-P-fluviatile_contig1:1430549..1430666Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 1430550..1430666 -
1622815287.1138005-CDS-P-fluviatile_contig1:1430878..14317931622815287.1138005-CDS-P-fluviatile_contig1:1430878..1431793Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 1430879..1431793 -
1693561388.746035-CDS-P-fluviatile_contig1:1430878..14317931693561388.746035-CDS-P-fluviatile_contig1:1430878..1431793Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 1430879..1431793 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.105.1prot_P-fluviatile_contig1.105.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig1 1429026..1431793 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig1.105.1

>prot_P-fluviatile_contig1.105.1 ID=prot_P-fluviatile_contig1.105.1|Name=mRNA_P-fluviatile_contig1.105.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=487bp
MPPPLNEESPWEALNSSLRDQGFSGVLLTRPGGSVAIPDPTSITDTLRNV
LLKYVEREEIIQEMSLELQRQSNMSGHRESVLNDSFRREKSDLFRRSAGA
EGRVAALEEENKRLRDQLATQIRRTKTENASLQSQLKQSEHRVKATEIAA
QKLMDKLQDEAHSDRQSQQRERALLMKLQQRKIRCRSGAKESKVVESLIA
HMKAQERSDAELDMLRAEVSRLGDELRERENIIRRHRLGLDWTPDLNQSV
KRTLASDELRDLRDRLTEAERSVGIMKQRERRAKERCSDMETRCAETDAR
AMETQEALANAQIELTSQPSLRSWRASQRRIKDLEEKLGQATNQVKEAVV
VAELRRWVDTGELMRRDRGNYRLKLDRLDNLPTSVLKQVVQDACRLLALQ
DVSLLSSSVSKLIRAVQMLPRLERFANSVCSYVFQRSHASWVAGRARTME
DVLPLLEHWIARPDSQEAFQQELMTVLETRVGGSQV*
back to top

mRNA from alignment at P-fluviatile_contig1:1428934..1434363-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig1.105.1 ID=mRNA_P-fluviatile_contig1.105.1|Name=mRNA_P-fluviatile_contig1.105.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5430bp|location=Sequence derived from alignment at P-fluviatile_contig1:1428934..1434363- (Porterinema fluviatile SAG_2381)
GGTGGAGAGGAGGATGACATAAGAGATGAGGTGTGTGCGGCCGGCCCCAT GTGTGGATTTTGACCCTGTGCCCTTGCCCAAATACGAAGTAGTCTCCAGT AAAAAACAAGTAGCAAGAGTAGGGAAAGAGGCTTGCACATTACTCATCTC CCGCTTCAAACCATTTTACAGCGAGCTTCCTTTTTCGCCTCGCTGTCACG TGCGCACTAAAGGAGGGTCCCATGTCAACGGTGGGCAAAGAAAGCGATGC GGCCAGCAGTTCTGGTGAGTAACCGATGCAGAGGAAGCTGTTTTGCGGAG CTGTGAGTTGCTGGCGAGTATTGATGGCAGGCGCTCGTGACAAATAAAAA ATCTCATGGGAAAGTGGGCAATATTTTGGCGGAACTTGAGAAAATATGGG TTACATGGCTTACTTTGGGACACAAAGTCAGTGACACCCCAAGAAGAAAC TGAGCACAGGACAGCTCCGAAGTACAGGAAACCGAGTGCAATAGAGAAGG CGTTACGTTACGAAAATCATTCTCTACGGGTGCCCACCCCTACCCCCACG GTTTGTGTCGTTTTCGCTTGCACGCTGATGGAAGCACGCGTTGCATGAAA CTGCTGTTGGAGTCGTACAGCACGGATGCAACGCGGGAGTGCGAGCGTCG ATCCTGCTTGAAGTATAGAAAGAAAAGGAGGGATGGTCAGGAAGTCCACA AAGAAGGCCGAAAACCCCAATTGTTCGCGACAATGAGCTTTTGGCTTAAT GTCGGGTGACTGTTGGTGTGTTGTTCTGCCGAGGCAAGCCTTGCGGTGTG ATTCTTTTTGCCTTGGAGCGACTGACACAGGCTCTATTACTGTCTTCGTT TTTTTCAGTTTTTCGGTACCTGGAATGTACGAAGTACTTTGTACTGCTTT TTGGCAGCCGCGGCGAAAGACATAAGCAAGAGTGAAACTTGGCAACAGAG GCAACAAGCACAAGACAAATTGCGAGTGTACGAGACATGAGCACACGGCT GACCGAAGGAAGCCGCGCAGGAAACTGAAAAGCGAAAATGAAGAAAATGA GCAAGATTCTGCAGGACTGAAACAAGAAACTGGTTTTAAGAATATATCCA CCTTTGGCTGGTGCCTCCGCCAAAATTAGGAAATTGAGGCTCGACCCATA TTTCACGTTTCTTGTTAGCGGGCGCCCACCGTAGTCTGTTGTCGTATTAG GCGGCAGCGTGGACATGATGATGGACAATTCGAACATGATCACCAACGCA CCGAAAAAGCATCAGCCAGATTGCATCATCTGGAACAGCACGTGTGCGCG CTATCACATTGAAATTGTATTTGAATGCGACTGCTCAACCCTGGCGCAGT CACCCTCTCCGAACCCCGGTCGAAAAATCGAGCCCCAAGCATTTGCTCGA TCAGAGACGGAATCCGAGAAGCAAATTGCTTTCAGATATCACTGATGTAA ACTTTGAGTTGGGAATGCTTCCGATGACGACCTACTCCGTTCATCGCATT TTGGAGCAAAAGGGCTCCCACCGATATAACGATTATATCACGCAACACCC CCGGTTCAACATGGCATCTTTACAAAGGATGCTTTTTCTATACAACGACG AAATTGTTTTTCTGTCGGGAAGTCTTCACGGAGCGTACCGGCTCGTGATG TTGAACACATGAGATATTTGCACCTTCGTTTCATTAATTTGCGGCGAAGG AGAAGGACTGTTCTCCGAACACTACCTGCCTGCTGCCTTATCATTCGCCT CAAAGCAAATGCGAGCCCTTCGTGCTATCACGACTTCAGGTCAAGTGCGG CTTTTGAGCGGAGCAACGGATCAGCCAATCTGGCCATGCTCAAGCCCAGA TCAGCCATCACCCATGAAGCCGCGCCAAGAGTGCAAGAGTGGACGCCACG TTTGCTTGGATCCTTTCAAGTGACGACCTCTAATGCATTTCACCGTGTTG TGGCCGGAATGTTTCCTTGGGAGTACCTACGGCCAGAGGCCCGAGGTGCT CTGTTTCTCCGTGCTCGGTGTGGTATTTCCAAGGTAAGAAATCCGTGCAT TCCATCCGCTTACCGACACCCGCTCGTGTTTTCGTCTCTCTCGCAGCTCA CCGCGGACGAATATTTTCGGTCGAGAGGCTGAGTTGTTCGAAAGGGCAAC CACCAGCGACCACCGCTCCGAAAATGGGAAGCCGGACGCATCGCTGGCGG AAGCAAACGCCAGGGTGAGGGGAGGAGACAACGGAGGTTATCTAACATCC AGCTAGTAATTGCATGGGACAGAATATTCTCGTCATACCACTAGGCGAAA TATGCGGTACGAAGCGCATGTCGTGGCGAGTCCGAGCGCACGTTGCCCAT TCCCGTCCCTCGCCATCATGATCAGGAGAACCTTCGCGGCTAAACAGGTC CGGCGGATAAATGCGACCCCCGTGCCCCTCTTTTTCGACGTTGCCTCGTG TTCACCTATTGTTGCTGCCTCTCGATTGTAAAATAGGTGAGCGGAGCAGC GGAGGCTGATCACAAGGATTCAGGGAAGGAAGCCACCGAATCCTCTGCAC GCTACACATCGTTTGAGAAAATGCCACCTCCACTGAACGAGGAGAGTCCA TGGGAAGCCCTAAATTCAAGTCTCCGAGATCAGGGGTTCTCTGGGGTTTT GCTGACGCGCCCCGGTGGGTCTGTCGCGATCCCCGATCCAACGAGCATCA CGGACACCTTGCGAAATGTGTTGCTGAAGTATGTAGAGAGAGAGGAAATT ATCCAGGAGATGTCGCTGGAGCTGCAGAGGCAGAGCAACATGAGTGGACA CCGCGAATCTGTGCTTAACGACTCGTTCCGGCGCGAGAAGTCCGACTTGT TCAGACGGTCCGCTGGAGCAGAAGGTCGAGTGGCTGCGTTGGAGGAGGAA AATAAGCGACTGCGAGACCAGCTGGCAACTCAAATCAGGCGGACGAAGAC CGAGAATGCCAGCTTGCAGAGTCAATTGAAGCAAAGCGAGCACCGGGTCA AGGCCACAGAGATAGCGGCACAGAAGCTGATGGACAAACTTCAGGACGAA GCACATAGCGATCGTCAATCTCAGCAGCGGGAACGGGCGTTGCTCATGAA ATTGCAGCAGCGAAAGATTCGCTGTAGAAGCGGTGCGAAGGAATCCAAGG TGGTAGAGTCCCTGATTGCCCATATGAAGGCCCAGGAGCGATCGGATGCA GAGCTGGATATGCTGCGAGCAGAAGTGTCACGCCTTGGAGATGAACTTCG AGAAAGAGAAAACATTATACGGAGACACCGTCTGGGCCTCGATTGGACGC CAGATCTCAACCAGAGTGTTAAGAGAACACTCGCTTCGGACGAGCTCCGG GATTTGCGTGATCGGCTGACAGAAGCGGAAAGAAGCGTTGGTATAATGAA ACAACGGGAGCGAAGGGCGAAAGAGCGATGCTCGGACATGGAAACGCGGT GCGCAGAGACTGACGCAAGGGCGATGGAGACACAGGTGAAGGTGCACGGA GCCGATAGTGCTGATCGAGATCTGTTGCGAAAGAAGTTGGTCCCACCAAG GGGTGCCCGTCATTTTTCATGTGCACGTCCACTACCGTTTGCAAGTCAAC GACATGGCGATATGCACGGTTTGTGGCTGACACACACACATATCCACCTG GCGTCCCGACGCCTCGCCGCGTGTTCCTTCCCGCGCGTGTTCGGCAGGAA GCTCTCGCCAATGCACAAATAGAGCTGACATCGCAACCGTCGCTGCGCAG CTGGCGTGCAAGTCAGAGACGTATCAAAGATCTGGAAGAGAAGCTCGGCC AAGCTACAAATCAGGTAGGTGCTGAAGTCAATGCCAGGTTGTCCGCTGGT CAGGTGCTTCAAGCCACGAATCACGTGATGTTTCCGTGCTCATCGAGCCG TTGATGATCCGCCTGCGTTGGCTCAACGCTTCCCGCTGACAAGCGCCTTT TCGCACCTTCCCTGCTTTTCTCTGCTTTCGCCGGCCATTTGGCGGCTTGC GGAACAAAAATATAGGTTAAGGAGGCGGTGGTTGTTGCGGAACTGAGGCG ATGGGTAGACACAGGGGAGCTCATGCGAAGGGACAGAGGAAACTATAGGC TCAAACTGGACAGGCTCGACAACTTACCGACTTCAGTGCTCAAGCAGGTG GTGCAGGACGCCTGTCGACTGCTGGCTCTGCAGGATGTGTCCTTGCTGAG CTCGTCGGTATCAAAACTTATTCGCGCGGTGCAGATGCTGCCCCGCCTCG AGCGCTTTGCCAACAGGTGAACTGTTCGTGAAGCAGGTGATATTCACTGA CCGGTTTTGACGTCTTCCCATTTGCAACCATTTTGATTCCATAGTGCCCC GAAATGGTGCGGAGTATATCTCAAGCTGCCACGTTGAAGTGGAACAGAAA AACGATTCCAAACATGTGGGGAATTCAAAATTCATGGACGATGCACGTGA CAACGACTTACGTGCACCATTGATTCCTTGCTCGCCGTACCACCATCTCC ACCTTCACGCCCAGCGTTTGCAGCTACGTTTTTCAACGCTCGCACGCGTC TTGGGTGGCTGGCAGAGCGCGAACGATGGAGGACGTGCTGCCATTACTTG AGCACTGGATCGCTCGACCCGACTCTCAAGAGGTGAAAGTGAGGGCGCTG TCCTGACTTCTTAAAATGCCAGCATGGCTGGTGGAAGCGGTTGACAGAAG TGTTTTCGCCACGGCTGCTGTAGAACGTGAAGGGTGTGTCGAATGTTTCT GCTTCCTAGTATTTTTTCATAGCGTAAATCTGCAGCGCCCCGACGAAATG GCACTTGTGACATTTTCACGCTCGTTTGTCCCTCACCGCTCACGGTCATC CACGTAAATGCCAGTGTTCTGACCGCATGTTAGAAGCGGGAATCATTATT TAAAAGCCGGGAAGAGTACTCTTATCCCCGCCGAAACAGTGGTGTGTTGT GGAGTTCATGCTTGTATCGTTTTTTACTCATTTGCTCAAATCCCCCGAAA AATGTCAAACGTCCACTCTACGAATCCCCGTTGAATCCCCATTTTTCCCA TTGTCGTGGCCTCCGGGGACCAACCCGCATTAGGCGTGTATTTTCTCCTG CTTATGTTTACGTGGGGCTTCATGCTGCTTGGGAGACCATGTGAATGCCG CACGGAATAGGTGGTGAATGCGACAAGATTCGAGCACAGGGTTATCGGAG CTGAAAGGTCGATATTCACGTATTTGTCTCCGGGGTCCGCCGACCTCGCG CGCGTGGACCATTGCCCTTTGCTCGCAGGCCTTTCAGCAGGAGTTGATGA CAGTCCTTGAGACTCGGGTTGGTGGATCACAGGTATGAGGGTCGGTCCGA GTACGTTCTGTCGCCCGCCTCCTCCCTTTTTTGTGTGTACAGGTGGGACA TTTGAAGAGCTTGCATTGAAGCATTTTAGT
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig1:1428934..1434363-

>mRNA_P-fluviatile_contig1.105.1 ID=mRNA_P-fluviatile_contig1.105.1|Name=mRNA_P-fluviatile_contig1.105.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2922bp|location=Sequence derived from alignment at P-fluviatile_contig1:1428934..1434363- (Porterinema fluviatile SAG_2381)
ATGCCACCTCCACTGAACGAGGAGAGTCCATGGGAAGCCCTAAATTCAAG
TCTCCGAGATCAGGGGTTCTCTGGGGTTTTGCTGACGCGCCCCGGTGGGT
CTGTCGCGATCCCCGATCCAACGAGCATCACGGACACCTTGCGAAATGTG
TTGCTGAAGTATGTAGAGAGAGAGGAAATTATCCAGGAGATGTCGCTGGA
GCTGCAGAGGCAGAGCAACATGAGTGGACACCGCGAATCTGTGCTTAACG
ACTCGTTCCGGCGCGAGAAGTCCGACTTGTTCAGACGGTCCGCTGGAGCA
GAAGGTCGAGTGGCTGCGTTGGAGGAGGAAAATAAGCGACTGCGAGACCA
GCTGGCAACTCAAATCAGGCGGACGAAGACCGAGAATGCCAGCTTGCAGA
GTCAATTGAAGCAAAGCGAGCACCGGGTCAAGGCCACAGAGATAGCGGCA
CAGAAGCTGATGGACAAACTTCAGGACGAAGCACATAGCGATCGTCAATC
TCAGCAGCGGGAACGGGCGTTGCTCATGAAATTGCAGCAGCGAAAGATTC
GCTGTAGAAGCGGTGCGAAGGAATCCAAGGTGGTAGAGTCCCTGATTGCC
CATATGAAGGCCCAGGAGCGATCGGATGCAGAGCTGGATATGCTGCGAGC
AGAAGTGTCACGCCTTGGAGATGAACTTCGAGAAAGAGAAAACATTATAC
GGAGACACCGTCTGGGCCTCGATTGGACGCCAGATCTCAACCAGAGTGTT
AAGAGAACACTCGCTTCGGACGAGCTCCGGGATTTGCGTGATCGGCTGAC
AGAAGCGGAAAGAAGCGTTGGTATAATGAAACAACGGGAGCGAAGGGCGA
AAGAGCGATGCTCGGACATGGAAACGCGGTGCGCAGAGACTGACGCAAGG
GCGATGGAGACACAGATGCCACCTCCACTGAACGAGGAGAGTCCATGGGA
AGCCCTAAATTCAAGTCTCCGAGATCAGGGGTTCTCTGGGGTTTTGCTGA
CGCGCCCCGGTGGGTCTGTCGCGATCCCCGATCCAACGAGCATCACGGAC
ACCTTGCGAAATGTGTTGCTGAAGTATGTAGAGAGAGAGGAAATTATCCA
GGAGATGTCGCTGGAGCTGCAGAGGCAGAGCAACATGAGTGGACACCGCG
AATCTGTGCTTAACGACTCGTTCCGGCGCGAGAAGTCCGACTTGTTCAGA
CGGTCCGCTGGAGCAGAAGGTCGAGTGGCTGCGTTGGAGGAGGAAAATAA
GCGACTGCGAGACCAGCTGGCAACTCAAATCAGGCGGACGAAGACCGAGA
ATGCCAGCTTGCAGAGTCAATTGAAGCAAAGCGAGCACCGGGTCAAGGCC
ACAGAGATAGCGGCACAGAAGCTGATGGACAAACTTCAGGACGAAGCACA
TAGCGATCGTCAATCTCAGCAGCGGGAACGGGCGTTGCTCATGAAATTGC
AGCAGCGAAAGATTCGCTGTAGAAGCGGTGCGAAGGAATCCAAGGTGGTA
GAGTCCCTGATTGCCCATATGAAGGCCCAGGAGCGATCGGATGCAGAGCT
GGATATGCTGCGAGCAGAAGTGTCACGCCTTGGAGATGAACTTCGAGAAA
GAGAAAACATTATACGGAGACACCGTCTGGGCCTCGATTGGACGCCAGAT
CTCAACCAGAGTGTTAAGAGAACACTCGCTTCGGACGAGCTCCGGGATTT
GCGTGATCGGCTGACAGAAGCGGAAAGAAGCGTTGGTATAATGAAACAAC
GGGAGCGAAGGGCGAAAGAGCGATGCTCGGACATGGAAACGCGGTGCGCA
GAGACTGACGCAAGGGCGATGGAGACACAGGAAGCTCTCGCCAATGCACA
AATAGAGCTGACATCGCAACCGTCGCTGCGCAGCTGGCGTGCAAGTCAGA
GACGTATCAAAGATCTGGAAGAGAAGCTCGGCCAAGCTACAAATCAGGAA
GCTCTCGCCAATGCACAAATAGAGCTGACATCGCAACCGTCGCTGCGCAG
CTGGCGTGCAAGTCAGAGACGTATCAAAGATCTGGAAGAGAAGCTCGGCC
AAGCTACAAATCAGGTTAAGGAGGCGGTGGTTGTTGCGGAACTGAGGCGA
TGGGTAGACACAGGGGAGCTCATGCGAAGGGACAGAGGAAACTATAGGCT
CAAACTGGACAGGCTCGACAACTTACCGACTTCAGTGCTCAAGCAGGTGG
TGCAGGACGCCTGTCGACTGCTGGCTCTGCAGGATGTGTCCTTGCTGAGC
TCGTCGGTATCAAAACTTATTCGCGCGGTGCAGATGCTGCCCCGCCTCGA
GCGCTTTGCCAACAGGTTAAGGAGGCGGTGGTTGTTGCGGAACTGAGGCG
ATGGGTAGACACAGGGGAGCTCATGCGAAGGGACAGAGGAAACTATAGGC
TCAAACTGGACAGGCTCGACAACTTACCGACTTCAGTGCTCAAGCAGGTG
GTGCAGGACGCCTGTCGACTGCTGGCTCTGCAGGATGTGTCCTTGCTGAG
CTCGTCGGTATCAAAACTTATTCGCGCGGTGCAGATGCTGCCCCGCCTCG
AGCGCTTTGCCAACAGCGTTTGCAGCTACGTTTTTCAACGCTCGCACGCG
TCTTGGGTGGCTGGCAGAGCGCGAACGATGGAGGACGTGCTGCCATTACT
TGAGCACTGGATCGCTCGACCCGACTCTCAAGAGCGTTTGCAGCTACGTT
TTTCAACGCTCGCACGCGTCTTGGGTGGCTGGCAGAGCGCGAACGATGGA
GGACGTGCTGCCATTACTTGAGCACTGGATCGCTCGACCCGACTCTCAAG
AGGCCTTTCAGCAGGAGTTGATGACAGTCCTTGAGACTCGGGTTGGTGGA
TCACAGGTATGAGCCTTTCAGCAGGAGTTGATGACAGTCCTTGAGACTCG
GGTTGGTGGATCACAGGTATGA
back to top