mRNA_P-lacustris_contig102.270.1 (mRNA) Pleurocladia lacustris SAG_25_93
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Overview
Homology
BLAST of mRNA_P-lacustris_contig102.270.1 vs. uniprot
Match: D7FY66_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY66_ECTSI) HSP 1 Score: 540 bits (1392), Expect = 1.850e-184 Identity = 283/308 (91.88%), Postives = 289/308 (93.83%), Query Frame = 2
Query: 389 MSQASSAP-------HDG---QGEDEQDQSDEVIFSCRLDNAKSITTILSCLSHGTRKDQQAQCEVTKESMTLVVSGRAKYTQAQGSLDSSLFQEYDCVEGVKFGINLTTLLECLQIFGPGSLAQTSVSMAYQEARATFRLTLEEG-VFTSCEIRTIHQDEEAMEFSALAKAFGRSKEVCRCILKSEILKEAFQELADLNGATSVSVTFGQEAPHLQLSAKGSIGSSEIDFPKTSEAFVCFECNALRVSWTYLMSGMETGMRALGHANETYFRVNEEGILCIQHQIPMSMGQTSFVDVLLCPDIQEMD 1279
MSQ SSAP H G +GE+E ++SDEVIFSCRLDNAKSITTILSCLSHGTRKDQQAQCEVTKESMTLVVSGRAKYTQAQGSLDSSLFQEYDCVEG KFGINLTTLLECLQIFGPGSLAQTSVSMAYQEARATFRLTLEEG VFTSCEIRTIHQDEEAMEFS LAKAFGRSKEVCRCILKSEILKEAFQELADLNGATSVSVTFGQEAPHLQLSAKGS GSSEIDFPK+SEAFVCFEC A RVSWTYLM+GMETGMRALGHANETYFRVNEEGILCIQHQIPMSMGQTSFVDVLLCPDIQEMD
Sbjct: 80 MSQESSAPGVDDPARHHGPGQRGEEEDEESDEVIFSCRLDNAKSITTILSCLSHGTRKDQQAQCEVTKESMTLVVSGRAKYTQAQGSLDSSLFQEYDCVEGAKFGINLTTLLECLQIFGPGSLAQTSVSMAYQEARATFRLTLEEGGVFTSCEIRTIHQDEEAMEFSTLAKAFGRSKEVCRCILKSEILKEAFQELADLNGATSVSVTFGQEAPHLQLSAKGSNGSSEIDFPKSSEAFVCFECTARRVSWTYLMTGMETGMRALGHANETYFRVNEEGILCIQHQIPMSMGQTSFVDVLLCPDIQEMD 387
BLAST of mRNA_P-lacustris_contig102.270.1 vs. uniprot
Match: A0A6H5JRH0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRH0_9PHAE) HSP 1 Score: 451 bits (1160), Expect = 2.040e-151 Identity = 244/286 (85.31%), Postives = 254/286 (88.81%), Query Frame = 2
Query: 389 MSQASSAP--------HD-GQGEDEQDQ-SDEVIFSCRLDNAKSITTILSCLSHGTRKDQQAQCEVTKESMTLVVSGRAKYTQAQGSLDSSLFQEYDCVEGVKFGINLTTLLECLQIFGPGSLAQTSVSMAYQEARATFRLTLEEG-VFTSCEIRTIHQDEEAMEFSALAKAFGRSKEVCRCILKSEILKEAFQELADLNGATSVSVTFGQEAPHLQLSAKGSIGSSEIDFPKTSEAFVCFECNALRVSWTYLMSGMETGMRALGHANETYFRVNEEGILCIQHQI 1213
MSQ SSA HD GQG E+D+ SDEVIFSCRLDNA+SITTILSCLSHGTRKDQQAQCEVTKESMTLVVSGRAKYTQAQGSLDSSLFQEYDCVEG KFGINLTTLLECLQIFG GSLAQTSVSMAYQEARATFRLTLE G VFTSCEIRTIHQDEEAM+FS LAKAFGRSKEVCRCILK E AFQELADLNGATSVSVTFGQEA HLQL AKGS GSSEIDFPK+S++ VCFEC A VSW +LM+GMETGMRALGHANETYFRVNEEGILCIQHQ+
Sbjct: 1 MSQESSASRVDDPARHHDPGQGGVEEDEESDEVIFSCRLDNAESITTILSCLSHGTRKDQQAQCEVTKESMTLVVSGRAKYTQAQGSLDSSLFQEYDCVEGAKFGINLTTLLECLQIFGRGSLAQTSVSMAYQEARATFRLTLEGGGVFTSCEIRTIHQDEEAMKFSTLAKAFGRSKEVCRCILKGE----AFQELADLNGATSVSVTFGQEATHLQLYAKGSNGSSEIDFPKSSQSLVCFECTARGVSWAFLMTGMETGMRALGHANETYFRVNEEGILCIQHQV 282
BLAST of mRNA_P-lacustris_contig102.270.1 vs. uniprot
Match: A0A6H5JQZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQZ4_9PHAE) HSP 1 Score: 319 bits (817), Expect = 1.720e-100 Identity = 185/245 (75.51%), Postives = 194/245 (79.18%), Query Frame = 2
Query: 389 MSQASSAP--------HD-GQGEDEQDQ-SDEVIFSCRLDNAKSITTILSCLSHGTRKDQQAQCEVTKESMTLVVSGRAKYTQAQGSLDSSLFQEYDCVEGVKFGINLTTLLECLQIFGPGSLAQTSVSMAYQEARATFRLTLEEGVFTSCEIRTIHQDEEAMEFSALAKAFGRSKEVCRCILKSEILKEAFQELADLNGATSVSVTFGQEAPHLQLSAKGSIGSSEIDFPKTSEAFVCFECNAL 1093
MSQ SSA HD GQG E+D+ SDEVIFSCRLDNA+SITTILSCLSHGTRKDQQAQCEVTKESMTLVVSGRAKYTQAQGSLDSSLFQEYDCVEG KFGINLTTLLECLQIFGPGSLAQTSVSMAYQE+ GV E++ + EAMEFS LAKAFGRSKEVCRCILKSEILKEAFQELADLNGATSVSVTFGQEA HLQLSAKGS GS P +S C+ L
Sbjct: 1 MSQESSASRVDDPARHHDPGQGGVEEDEESDEVIFSCRLDNAESITTILSCLSHGTRKDQQAQCEVTKESMTLVVSGRAKYTQAQGSLDSSLFQEYDCVEGAKFGINLTTLLECLQIFGPGSLAQTSVSMAYQESDVPPHPGRGRGVH---ELQDKNHPPEAMEFSTLAKAFGRSKEVCRCILKSEILKEAFQELADLNGATSVSVTFGQEATHLQLSAKGSNGSRYAMAPPSSHGAPGSRCSVL 242
BLAST of mRNA_P-lacustris_contig102.270.1 vs. uniprot
Match: A0A835YYW5_9STRA (Repair protein Rad1/Rec1/Rad17-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYW5_9STRA) HSP 1 Score: 318 bits (816), Expect = 5.130e-99 Identity = 162/288 (56.25%), Postives = 214/288 (74.31%), Query Frame = 2
Query: 428 EDEQDQSDEVIFSCRLDNAKSITTILSCLSHGTRKDQQAQCEVTKESMTLVVSGRAKYTQAQGSLDSSLFQEYDCVE-GVKFGINLTTLLECLQIFGPGSLAQTSVSMAYQEARATFRLTLEE-GVFTSCEIRTIHQDEEAMEFSALAKAFGRSKEVCRCILKSEILKEAFQELADLNGATSVSVTFGQEAPHLQLSAKGSIGSSEIDFPKTSEAFVCFECNALRVSWTYLMSGMETGMRALGHANETYFRVNEEGILCIQHQIPMSMGQTSFVDVLLCPDIQEMDMD 1285
E E++ ++ +FSCR+DNA+++TT+LSCLSHG+RK Q AQCE T E +T V++G+AK+TQAQG+L LFQ Y+C E G +FGINL+ LLECLQIFG A S ++AY ATF++TLEE GVFTSCE+RT+ ++ +AMEF+ALA AF S E CRCI++SE LKEAFQELADL GA S+ Q APHL+LS GS GSS I FP++SEAFV F C + W+Y +S +E GMRAL A ET+ R+NEEGI+CIQHQ+ ++ G ++VD L+C + ++D D
Sbjct: 25 EAEREAEEKDLFSCRIDNARAVTTVLSCLSHGSRKAQHAQCEATPEGLTFVITGKAKFTQAQGALSKDLFQAYECEEDGGRFGINLSMLLECLQIFGMN--ASASAALAYYPGTATFKVTLEENGVFTSCELRTLVEESDAMEFAALAAAFRSSPEECRCIIRSETLKEAFQELADLPGAASIVFEASQHAPHLKLSTSGSYGSSSIQFPRSSEAFVHFSCTPPSLRWSYALSALEGGMRALPFAQETFVRINEEGIMCIQHQVQVA-GHNTYVDFLICANTADIDDD 309
BLAST of mRNA_P-lacustris_contig102.270.1 vs. uniprot
Match: A0A4D9CMN7_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CMN7_9STRA) HSP 1 Score: 260 bits (665), Expect = 2.390e-77 Identity = 142/296 (47.97%), Postives = 194/296 (65.54%), Query Frame = 2
Query: 434 EQDQSDEVIFSCRLDNAKSITTILSCLSHGTRKDQQAQCEVTKESMTLVVSGRAKYTQAQGSLDSSLFQEYDCV-EGVKFGINLTTLLECLQIFGPGSLAQTSVSMAYQEARATFRLTLEE-GVFTSCEIRTIHQDEEAMEFSALAKAFGRSKEVCRCILKSEILKEAFQELADLNGATSVSVTFGQEAPHLQLSAKGSIGSSEIDFPKTSEAFVCFECNALRVSWTYLMSGMETGMRALGHANETYFRVNEEGILCIQHQIPMSMG-QTSFVDVLLCPDIQEMDMDEEQEEQAQE 1312
EQ +E +FSCR+D+ K IT L+CLS G+RKDQ AQ EV E + +V+GRAK+TQ+QG+ + +LFQ + C EG F I+L LLECLQ+FG SL T ++M+Y+ +A RLTLEE GV T+CE+R + E+A + +ALA AF EV R ILKS++LKEA EL+DL GA SV V+ P+ L+ G G EI PK+SEAFV F+C+ R SW+Y + + GMRAL A ETY R+NEEGI+C+QHQ+ + Q++F+D L + E E +E + +E
Sbjct: 9 EQKTDEEPLFSCRIDSTKIITATLACLSDGSRKDQLAQVEVNNEGIVFIVTGRAKFTQSQGTFNRALFQAFQCQPEGGSFTIDLHLLLECLQVFGAASLTNTMLTMSYEPRKAALRLTLEEQGVLTTCEVRALEAGEDAFDLAALASAFRSRPEVLRAILKSDVLKEAISELSDLPGAGSVRVSVAPHEPNFHLATNGICGGLEIFLPKSSEAFVHFDCSEAR-SWSYGLGALNQGMRALTVAKETYVRINEEGIMCVQHQVENTASRQSTFIDFLCLAEETEEGRGENEEHEDEE 303
BLAST of mRNA_P-lacustris_contig102.270.1 vs. uniprot
Match: A0A7S2WVI5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WVI5_9STRA) HSP 1 Score: 237 bits (604), Expect = 2.090e-68 Identity = 133/292 (45.55%), Postives = 189/292 (64.73%), Query Frame = 2
Query: 419 GQGEDEQDQSDEVIFSCRLDNAKSITTILSCLSHGT-RKDQQAQCEVTKESMTLVVSGRAKYTQAQGSLDSSLFQEYDCVEGVKFGINLTTLLECLQIFGPGSLAQTSVSMAYQEARATFRLTLEE-GVFTSCEIRTIH---QDEEAMEFSALAKAFGRSKEVCRCILKSEILKEAFQELADLNGATSVSVTFGQEAPHLQLSAKGSIGSSEIDFPKTSEAFVCFECN-ALRVSWTYLMSGMETGMRALGHANETYFRVNEEGILCIQHQIPMSMGQTSFVDVLLCP-DIQE 1273
G+G + D +FSCRL++AK + ++SCL+H RK+ A C+V + + ++ RAK Q G+L +F ++C E F +NL +L+CL +FGP +++ T+++M Y + A F+LT+EE GVFT C+I+T+ QDE+ EFS L +F R E C+ ILKSE LKEA EL DL+GA+ V V APH QL+A G++G+ EI+FPK+SE FV F C+ ALR +TY + + GMRAL A ET R+N GI+CIQHQ+ G TSFVD L+CP D+Q+
Sbjct: 6 GEGYADADHGGATLFSCRLESAKELHALVSCLAHEKKRKEHIALCQVNDQGLNFSMNQRAKTIQVSGTLPRRVFSSFECHEHGAFCLNLGMVLDCLSLFGPAAISSTAIAMTYSKEDAVFQLTMEEHGVFTRCDIQTLDGSAQDED--EFSQLTSSFRRDPEACKLILKSEFLKEALYELQDLSGASFVDVFISPTAPHFQLAATGNLGTLEIEFPKSSELFVLFSCSEALR--FTYRLEALIRGMRALLVAAETCVRINVVGIMCIQHQVQNHSGVTSFVDFLMCPADLQD 293
BLAST of mRNA_P-lacustris_contig102.270.1 vs. uniprot
Match: A0A7S2G8B6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G8B6_9STRA) HSP 1 Score: 202 bits (515), Expect = 4.650e-56 Identity = 110/267 (41.20%), Postives = 162/267 (60.67%), Query Frame = 2
Query: 491 ITTILSCLSHGTRKDQQAQCEVTKESMTLVVSGRAKYTQAQGSLDSSLFQEYDCVE-GVKFGINLTTLLECLQIFGPGSLAQTS--VSMAYQEARATFRLTLEE-GVFTSCEIRTIHQD---EEAMEFSALAKAFGRSKEVCRCILKSEILKEAFQELADLNGATSVSVTFGQEAPHLQLSAKGSIGSSEIDFPKTSEAFVCFECN-ALRVSWTYLMSGMETGMRALGHANETYFRVNEEGILCIQHQIPMSMGQTSFVDVLLCPDI 1267
I ++L C+ +GTRKDQ AQC+V ++ + R++ TQ G++D + F E++C + G F IN+ TLL+CL IFGP S V+M++ + L L+E GVFT C+I+ I D E F+ + F + C+CI+KSE LKEA EL DLN AT +SV +APH Q+SA+GS+G +I+FP++S+ F FEC ++ + Y GMRAL + E+YFR+NE G+LCIQH + G F+D ++ P+I
Sbjct: 1 IQSMLQCIVNGTRKDQHAQCQVHAGGISFSLQSRSRTTQVTGTMDKNCFTEFECYDDGGTFCINICTLLDCLSIFGPQQAGTNSTVVTMSFDKNLCQLILNLDEDGVFTRCDIQAIENDGDEEVGARFAQFSDEFRQKPSPCKCIVKSEQLKEALNELRDLNNATRLSVLLSPQAPHFQISAQGSLGFLDIEFPRSSDLFELFECTETMKTEYDY--DSFVQGMRALTVSEESYFRINEGGLLCIQHHVETHGGGRCFIDFIMLPNI 265
BLAST of mRNA_P-lacustris_contig102.270.1 vs. uniprot
Match: A0A7S0XDK7_9STRA (Hypothetical protein (Fragment) n=2 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XDK7_9STRA) HSP 1 Score: 162 bits (410), Expect = 8.900e-42 Identity = 87/222 (39.19%), Postives = 137/222 (61.71%), Query Frame = 2
Query: 614 GSLDSSLFQ---EYDCVEGVKFGINLTTLLECLQIFGPGSLAQTSVSMAYQEARATFRLTLEE-GVFTSCEIRTIHQDEEAMEFSALAKAFGRSKEVCRCILKSEILKEAFQELADLNGATSVSVTFGQEAPHLQLSAKGSIGSSEIDFPKTSEAFVCFECNALRVSWTYLMSGMETGMRALGHANETYFRVNEEGILCIQHQIPMSMGQTSFVDVLLCPDI 1267
G D +F+ E+D E ++ INLTT ++CL +FG SL T+ ++ Y A +L+LE+ G+ T+C+I T++ D L AF S E+C+ ILKSEILKEA +L+D+ GAT+V++ + +L G++G EI+FP+ S+ FV F C+ WTY ++ ++ GM+AL + ET+ R+NEEG++CIQHQI + G ++D L+ D+
Sbjct: 5 GYFDDYIFKPINEHDNDERIRIFINLTTFVDCLLLFG-SSLETTAGTITYNSDDALLKLSLEDSGILTTCDISTLYMDNNEDIGYELFSAFLSSNELCQVILKSEILKEAMHDLSDVYGATTVAIEITKNPENLTFMTVGTMGECEIEFPRLSDLFVSFRCDKSS-KWTYPLTSLQLGMKALNISKETFIRMNEEGVICIQHQIETNRGHEIYIDYLMVSDV 224
BLAST of mRNA_P-lacustris_contig102.270.1 vs. uniprot
Match: A0A8K1C6J7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C6J7_PYTOL) HSP 1 Score: 151 bits (382), Expect = 9.540e-37 Identity = 97/307 (31.60%), Postives = 154/307 (50.16%), Query Frame = 2
Query: 440 DQSDEVIFSCRLDNAKSITTILSCLSHGTRKDQQAQCEVTKESMTLVVSGRAKYTQAQGSLDSSLFQEYDCVEG------------------VKFGINLTTLLECLQIFGPGSLAQTSVSMAYQEARATFRLTLEE-GVFTSCEIRTIHQDEEAMEFSALAKAFGRSKEVCRCILKSEILKEAFQELADLNGATSVSVTF-----GQEAPH--LQLSAKGSIGSSEIDFPKTSEAFVCFECNALRVS------WTYLMSGMETGMRALGHANETYFRVNEEGILCIQHQIPMSMGQTSFVDVLLCPD 1264
DQ ++ + C ++ K + T+LSCL G +KDQ+ +C++ M + K Q + SL S LF ++ F +NL+ L+E L +FGP SL +S+ ++Y A L +E+ GV C ++ + + + AF +S + RCI++SE L +AF EL DL A SV++ G + H L LSA GS EI+F ++S AF+ F C S T+ ++ ++ +ALGH+NET+ R+N +G L +QH I G +FVD L+ P+
Sbjct: 39 DQREKPVLVCTSESVKLLVTLLSCLFQG-KKDQRIRCDIDSAGMLFTSHSKGKSLQIKTSLGSELFDTFEFRASETSQLDHDDEDDSQLDTQYSFALNLSALIESLSMFGPASLPTSSLRLSYFAESARLTLLVEDNGVICECAMQVLELESNDIAQLEFESAFEQSAVIGRCIMQSEPLHDAFAELYDLPSAASVAIAMYEDDEGPASSHKCLSLSATSETGSCEIEFARSSSAFIEFFCTNDETSDDGSASATFHVAVLQQAFKALGHSNETFLRMNADGFLSVQHMIESGSGDKAFVDALISPE 344
BLAST of mRNA_P-lacustris_contig102.270.1 vs. uniprot
Match: A0A2D4C542_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C542_PYTIN) HSP 1 Score: 139 bits (351), Expect = 4.460e-33 Identity = 95/295 (32.20%), Postives = 152/295 (51.53%), Query Frame = 2
Query: 491 ITTILSCLSHGTRKDQQAQCEVTKESMTLVVSGRAKYTQAQGSLDSSLFQEYDCVE---------GV----KFGINLTTLLECLQIFGPGSLAQTSVSMAYQEARATFRLTLEE-GVFTSCEIRTIHQDEEAMEFSALAKAFGRSKEVCRCILKSEILKEAFQELADLNGATSVSVTF---GQE----APH------------LQLSAKGSIGSSEIDFPKTSEAFVCFECNALR----VSWTYLMSGMETGMRALGHANETYFRVNEEGILCIQHQIPMSMGQTSFVDVLLCPD 1264
+ T+LSCL G +KDQ+ +C+V M R K Q + L + LF+ Y+ E G+ F +NL L+E L +FG +LA +S+ ++Y AT L +E+ GV C ++ + + M AF +S + RCI++SE L++AF EL DL A V+++ G E + H L LSA+ GS EI+F ++S AF+ F C + + T+ ++ ++ +AL H+NET+ R+N +G L +QH I G+ +FVD L+ P+
Sbjct: 1 MVTLLSCLFQG-KKDQRVRCDVDNAGMLFTAHSRGKSLQIKTXLGAXLFESYEFREPDDTNGDGDGLDTQHSFALNLNALIESLSMFGSSALATSSLRLSYFPQTATLTLVVEDNGVICECAMQVLELEGNDMSQLEFESAFEQSAVLGRCIIQSEPLQDAFAELYDLPSAACVTISMFPDGDENQIDSDHRRRSVAHAQGRCLSLSAQSETGSCEIEFARSSAAFIEFFCASSGDNEPCAATFHVAVLQQAFKALAHSNETFLRMNADGFLSVQHMIETGTGERAFVDALVSPE 294 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig102.270.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig102.270.1 >prot_P-lacustris_contig102.270.1 ID=prot_P-lacustris_contig102.270.1|Name=mRNA_P-lacustris_contig102.270.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=315bp MSQASSAPHDGQGEDEQDQSDEVIFSCRLDNAKSITTILSCLSHGTRKDQback to top mRNA from alignment at P-lacustris_contig102:76231..82262+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig102.270.1 ID=mRNA_P-lacustris_contig102.270.1|Name=mRNA_P-lacustris_contig102.270.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=6032bp|location=Sequence derived from alignment at P-lacustris_contig102:76231..82262+ (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig102:76231..82262+ >mRNA_P-lacustris_contig102.270.1 ID=mRNA_P-lacustris_contig102.270.1|Name=mRNA_P-lacustris_contig102.270.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=1890bp|location=Sequence derived from alignment at P-lacustris_contig102:76231..82262+ (Pleurocladia lacustris SAG_25_93)back to top |