prot_P-lacustris_contig1016.243.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig1016.243.1
Unique Nameprot_P-lacustris_contig1016.243.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length345
Homology
BLAST of mRNA_P-lacustris_contig1016.243.1 vs. uniprot
Match: D7FHR6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHR6_ECTSI)

HSP 1 Score: 184 bits (468), Expect = 1.110e-48
Identity = 123/227 (54.19%), Postives = 147/227 (64.76%), Query Frame = 0
Query:    3 GLASIEEDVERKRVGKNPFDPKFTALTESPFTETSTS----GNDGQEMETISRHIIVRMQVIAKQIAFLSKETAGQPDKVKIRNRWCMHDTMQCALNVFSLHTQAESSRASLEKSTGTVARSDRSRSSSGGDD-GTAAASESPLSPLAANLAARFDLYRRLCQGLVTTKELLPEGML-AKPSLVTP--PAPMPAAAAA----AVPSCKSPGILHEFIKHVKPFSVCF 217
            GL ++EEDVER RVGKNPFD +FTALTESPFTETSTS    GN G E+ETISRHIIVRM+VIAKQIAFLSKETAGQP KV +     +  +   A +   L     S   + E+   T A + +  S SG +D GT  AS    SP  A L AR DLYR++ QGL T ++LLP GML A PS +    P P+PA   +     + S  +PGILH FIKHVKPFSVC+
Sbjct:    4 GLDTVEEDVERNRVGKNPFDQRFTALTESPFTETSTSTGQIGNGGHEIETISRHIIVRMEVIAKQIAFLSKETAGQPHKV-LAGGGRVGASSSSATSAGRLQRNV-SVEGAAERPLDTRAGNAKIGSRSGFNDIGTGVASGDSSSPFGAPLVARLDLYRKIRQGLATAEDLLPAGMLSAAPSGMASSRPTPLPATVTSLSSDGLASSTAPGILHGFIKHVKPFSVCY 228          
BLAST of mRNA_P-lacustris_contig1016.243.1 vs. uniprot
Match: A0A6H5K0U6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0U6_9PHAE)

HSP 1 Score: 94.7 bits (234), Expect = 1.350e-17
Identity = 113/300 (37.67%), Postives = 137/300 (45.67%), Query Frame = 0
Query:   57 MQVIAKQIAFLSKETAGQPDKVKIRNRWCMHDTMQCALNVFSLHTQAESSRASLEKSTGTV-ARSDRSRSSSGGDDGTAAASESPLSPLAANLAARFDLYRRLCQGLVTTKELLPEGMLAKPSL---VTPPAPMPAAAAA------AVPS---------------CK----------------SPGILHEFIKHVKPFSVCFDPPASPAGAATAESTRTTRNADQTTMPAAD-GESAAXXXXXXXXXXXXXXXXGXGDCDEGAVGFCDSGDDMSCSPEK------TPTPAGSLPHQLTLA 308
            M+VIAKQIAFLSKETAGQP KV          +   +    S   Q  ++  +  K  GT    +D    S   +DG      +  SP  A L AR DLYRR+ QGL T +ELLP GML    L    +PP P+PA   +      A P+               C+                +PG+LH FIKHVKPFSVC    A   G         + NA   +  A D G S      XXXXXXXXXXXXG G     A  FCD GDDM CSP +      TPT +      +T+A
Sbjct:    1 MEVIAKQIAFLSKETAGQPHKVLAGGGRVGTSSSSAS----SAGRQQRNAEGAEYKPLGTSPGNADIGGRSGYYNDGPGVVCGNSSSPFGAPLVARLDLYRRIRQGLATAEELLPAGMLLAAPLGMASSPPTPLPATVTSLTSDGLACPTGEVTFLGASLQARRCCRGITLDSDGSFRDASPPAPGVLHGFIKHVKPFSVCNASAAQANGPPKENDDGISTNAKSMSKFAEDEGRSDGISDGXXXXXXXXXXXXGSGT----AANFCDYGDDMHCSPYEATIGHVTPTSSAGRSPTITMA 292          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1016.243.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FHR6_ECTSI1.110e-4854.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K0U6_9PHAE1.350e-1737.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig1016contigP-lacustris_contig1016:15601..19838 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig1016.243.1mRNA_P-lacustris_contig1016.243.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig1016 9101..38563 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig1016.243.1 ID=prot_P-lacustris_contig1016.243.1|Name=mRNA_P-lacustris_contig1016.243.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=345bp
MEGLASIEEDVERKRVGKNPFDPKFTALTESPFTETSTSGNDGQEMETIS
RHIIVRMQVIAKQIAFLSKETAGQPDKVKIRNRWCMHDTMQCALNVFSLH
TQAESSRASLEKSTGTVARSDRSRSSSGGDDGTAAASESPLSPLAANLAA
RFDLYRRLCQGLVTTKELLPEGMLAKPSLVTPPAPMPAAAAAAVPSCKSP
GILHEFIKHVKPFSVCFDPPASPAGAATAESTRTTRNADQTTMPAADGES
AAAAAAGCGTYDDDDDYNGNGDCDEGAVGFCDSGDDMSCSPEKTPTPAGS
LPHQLTLAPLPQQRTTWDLRRHQEGAALLAEGKLGAVTANKLER*
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