prot_P-lacustris_contig997.16261.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig997.16261.1
Unique Nameprot_P-lacustris_contig997.16261.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length513
Homology
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BLAST of mRNA_P-lacustris_contig997.16261.1 vs. uniprot
Match: A0A6H5K4P8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4P8_9PHAE)

HSP 1 Score: 71.6 bits (174), Expect = 1.480e-10
Identity = 72/190 (37.89%), Postives = 88/190 (46.32%), Query Frame = 0 
Query:  327 SQETIRVFESLVSYDQRSKFRNWVDSNRDAVQHLDHEPAPTTAAXXXXXXXXXXXXTS--PVQTRRGPPKLRRSSSTNSGGVSVADGNPIVLSHTAGGIEVADPQRQTRGACAGVAAARGRQHCPPEEETEGVGGINVS-AARAGRSNREQAASPQFRFRSQVDGMNSMSGGEEGGAPPGDVLGAWSGGV 513
            +QET R FE+L S+DQ SKFR+W+DSNR+AV  LDH+   TT              ++  P +TRRGP   RRS S       V DG                             A RG Q  P        G  NV+  AR G     QAASP+FRFRSQ D +   +G + GGAP G   G  +GGV
Sbjct:   51 TQETARAFETLTSHDQCSKFRSWLDSNREAVAQLDHDLPDTTGTSPPPPTIPSTPRSAEPPARTRRGP---RRSQS------GVVDGXXXXX-----------XXXXXXXXXXXXXAMRGHQ--PWGGGAVEGGTTNVTEGARGG-----QAASPRFRFRSQAD-VGGGAGNDSGGAPLG-TGGRGAGGV 211
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BLAST of mRNA_P-lacustris_contig997.16261.1 vs. uniprot
Match: D7FMN5_ECTSI (BZIP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMN5_ECTSI)

HSP 1 Score: 70.1 bits (170), Expect = 3.880e-9
Identity = 40/49 (81.63%), Postives = 44/49 (89.80%), Query Frame = 0 
Query:    4 AAAPAAVLEQERGPARDEAAASVEEHLKDLALGALDAHSISLAVARVPP 52
            A A  AVLE+ERGPARD+AAASVEE LKDLALGALDAHSISLAV+R+ P
Sbjct:  370 AVASVAVLEEERGPARDQAAASVEELLKDLALGALDAHSISLAVSRMAP 418
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig997.16261.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K4P8_9PHAE1.480e-1037.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FMN5_ECTSI3.880e-981.63BZIP domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig997contigP-lacustris_contig997:54797..60848 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig997.16261.1mRNA_P-lacustris_contig997.16261.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig997 54797..76699 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig997.16261.1 ID=prot_P-lacustris_contig997.16261.1|Name=mRNA_P-lacustris_contig997.16261.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=513bp
MGGAAAPAAVLEQERGPARDEAAASVEEHLKDLALGALDAHSISLAVARV
PPPYFPAAQPTSEATASAAAADQLREASPSSSAAAAAVAWSTLAASSSPP
PPPSPFVSEAEAMFAAELGPPSPLGAGPTSSNNGTSDFLHHPRAQSPLAR
MDSPDSSDWWDVLDVAVGGPASSSASTAMDVLPGGDEGSEIAAAVAAAAG
GGALVPAKQEVGVGAAIVKGREDTNAATKEGEDWEVASAGVAEFGEEPRG
DVGNGLASGSCWAGEKAQSLREAVRLTEAQAMALAASSDEQWGDELLAAL
VLSKVSSALRTPGRMDMPVMQASTLISQETIRVFESLVSYDQRSKFRNWV
DSNRDAVQHLDHEPAPTTAAAAAEPPSPSATATSPVQTRRGPPKLRRSSS
TNSGGVSVADGNPIVLSHTAGGIEVADPQRQTRGACAGVAAARGRQHCPP
EEETEGVGGINVSAARAGRSNREQAASPQFRFRSQVDGMNSMSGGEEGGA
PPGDVLGAWSGGV
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