prot_P-lacustris_contig99.16190.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig99.16190.1
Unique Nameprot_P-lacustris_contig99.16190.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length233
Homology
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BLAST of mRNA_P-lacustris_contig99.16190.1 vs. uniprot
Match: A0A6H5L297_9PHAE (SET domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L297_9PHAE)

HSP 1 Score: 271 bits (692), Expect = 2.140e-84
Identity = 142/230 (61.74%), Postives = 168/230 (73.04%), Query Frame = 0 
Query:    1 MWVCRSCGWCSNICSADSDGAPSVALQHTESILSAEVFALVMAHTVDPRRRTASSPRRHGSSEAASTNRGWSRQDDEQLLSRQHAVRRMLNTSVTFLGKRHWTTFGCAHMRLKLELISALRDDGSGAGRSTSSFSSSRTTQPEFLDWAVRELNALEQWLASALEPATSHPPAYYVFGVVCDLLEAIKGCSARGTSEGLPLLLRRVEAWVLVFADEDQQRRFSAAVTVAGL 230
            MWVC+ CGWCSNI S  SD APS +L   ESI+SAEVFALVMAHTVDPR  +AS    + + +  S +RGW    DEQL +R+ A++ +L TSV  LG+RHWTTF CA++RLKLEL +   DDG    RS S  SSS   QPEFLDWA+RELNALEQWL +AL   TSHPPAYY+F +VCDLL+A +GCSAR T  GL LLL RVEAWVLVFADEDQ+RRF+  +    L
Sbjct:  356 MWVCQYCGWCSNIDSTCSDSAPSRSLHCKESIVSAEVFALVMAHTVDPRSPSASCT--NMALDGRSGSRGWPHHPDEQLQARRDAIKGILETSVAVLGRRHWTTFSCAYLRLKLELSARSTDDGQRRPRSGSPHSSSLRIQPEFLDWAMRELNALEQWLGAALGSVTSHPPAYYIFDLVCDLLDATRGCSARNTVGGLQLLLGRVEAWVLVFADEDQRRRFAIVLAAVDL 583
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BLAST of mRNA_P-lacustris_contig99.16190.1 vs. uniprot
Match: D8LNS6_ECTSI (Set domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNS6_ECTSI)

HSP 1 Score: 135 bits (339), Expect = 1.180e-33
Identity = 66/87 (75.86%), Postives = 73/87 (83.91%), Query Frame = 0 
Query:  142 PEFLDWAVRELNALEQWLASALEPATSHPPAYYVFGVVCDLLEAIKGCSARGTSEGLPLLLRRVEAWVLVFADEDQQRRF---SAAV 225
            PEFLDWA+RELNALEQWL +AL P TSHPPAYY+F +VCDLL+A +GCSAR T  GL LLL RVEAWV VFADEDQ+RRF   SAAV
Sbjct:  355 PEFLDWAMRELNALEQWLGAALGPVTSHPPAYYIFDLVCDLLDATRGCSARDTVGGLQLLLGRVEAWVSVFADEDQRRRFAVVSAAV 441
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig99.16190.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L297_9PHAE2.140e-8461.74SET domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LNS6_ECTSI1.180e-3375.86Set domain protein n=1 Tax=Ectocarpus siliculosus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig99contigP-lacustris_contig99:187725..188511 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig99.16190.1mRNA_P-lacustris_contig99.16190.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig99 186786..190066 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig99.16190.1 ID=prot_P-lacustris_contig99.16190.1|Name=mRNA_P-lacustris_contig99.16190.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=233bp
MWVCRSCGWCSNICSADSDGAPSVALQHTESILSAEVFALVMAHTVDPRR
RTASSPRRHGSSEAASTNRGWSRQDDEQLLSRQHAVRRMLNTSVTFLGKR
HWTTFGCAHMRLKLELISALRDDGSGAGRSTSSFSSSRTTQPEFLDWAVR
ELNALEQWLASALEPATSHPPAYYVFGVVCDLLEAIKGCSARGTSEGLPL
LLRRVEAWVLVFADEDQQRRFSAAVTVAGLIL*
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