mRNA_P-lacustris_contig981.16133.1 (mRNA) Pleurocladia lacustris SAG_25_93

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-lacustris_contig981.16133.1
Unique NamemRNA_P-lacustris_contig981.16133.1
TypemRNA
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Homology
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BLAST of mRNA_P-lacustris_contig981.16133.1 vs. uniprot
Match: D8LHH2_ECTSI (CPLD51 protein required for cyt b6 assembly n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHH2_ECTSI)

HSP 1 Score: 261 bits (667), Expect = 1.870e-79
Identity = 151/204 (74.02%), Postives = 162/204 (79.41%), Query Frame = 2 
Query:  182 MTRRARSTLIMALTTAVGLATSSQGFRTATVAGTSGFIANTGGSFFSINRGRSVCSRRARAAYQTTQRDWHPTVQTTGLLLSMVIAPSEVADVAITAHDAVSVALPTFLLSGEMAAEAAGSVGYSKFSYYTTLGLYVLSFPGLWSVVKRATKTKYKDATYELPGPASTEKGAESVQQTAAKIIAYFQANNYKIKEAGETITFEG 793
            MTRR   + ++AL+T V LA S QGF   T  GT  F+A +G  FFS+N GR V SRRARAAYQ   R W  T    G  LSMV+AP EV D A+ AH AVS ALP+FLLS E  AEAAGSVGYSKFSYYTTLGLYVLSFPGLWSVVKRATKTKYKDATYELPGPASTEKGAESV+QTAAKIIAYFQANNYKIKEAGETITFEG
Sbjct:    1 MTRRTTRSALLALST-VSLAASGQGFFAGTT-GTPAFVATSGSRFFSVNGGRPVSSRRARAAYQ---RHWPSTA---GSPLSMVVAPHEVVDAAVAAHHAVS-ALPSFLLSDEAVAEAAGSVGYSKFSYYTTLGLYVLSFPGLWSVVKRATKTKYKDATYELPGPASTEKGAESVKQTAAKIIAYFQANNYKIKEAGETITFEG 195
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BLAST of mRNA_P-lacustris_contig981.16133.1 vs. uniprot
Match: A0A835YMB8_9STRA (CPLD51 protein required for cyt b6 assembly n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMB8_9STRA)

HSP 1 Score: 163 bits (413), Expect = 7.950e-43
Identity = 79/109 (72.48%), Postives = 89/109 (81.65%), Query Frame = 1 
Query:  790 GAIQASKGQAFFLVFCTALSFATLALVLQIQFPAIGNYWFLLTLLSPYAGVYYWQNGSRNDKAQVRLETSDDETMTEIYITGAAEELDRLSKTMGYMEKGMIRVKGLLE 1116
            GA+QAS+ Q FFLVFCT L   TL+LVLQIQFP  G YW+LLTLLSPYAGVYYW N  R DKAQVRLET+DD+T  EI IT   EELDR++KTMGY +KGMIRVKG+LE
Sbjct:  168 GAVQASRSQGFFLVFCTFLCLGTLSLVLQIQFPDFGTYWYLLTLLSPYAGVYYWNNAQRKDKAQVRLETTDDDTTVEIRITAGEEELDRMAKTMGYQQKGMIRVKGILE 276
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BLAST of mRNA_P-lacustris_contig981.16133.1 vs. uniprot
Match: A0A7R9UFF5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UFF5_9STRA)

HSP 1 Score: 129 bits (323), Expect = 1.670e-31
Identity = 64/110 (58.18%), Postives = 75/110 (68.18%), Query Frame = 1 
Query:  787 RGAIQASKGQAFFLVFCTALSFATLALVLQIQFPAIGNYWFLLTLLSPYAGVYYWQNGSRNDKAQVRLETSDDETMTEIYITGAAEELDRLSKTMGYMEKGMIRVKGLLE 1116
            RG    SK QAFFL F T L   +L LVL IQFP  GNYW+ LTLL+PYAGVYYWQN S  + AQVRLETSDD   T+I +    EELDR   T+GY +KGM+ VK + +
Sbjct:   12 RGLAGRSKSQAFFLTFITFLGMGSLGLVLSIQFPFAGNYWYALTLLAPYAGVYYWQNASIENSAQVRLETSDDGMTTDIVVRAEKEELDRFQDTLGYSQKGMVYVKSIFD 121
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BLAST of mRNA_P-lacustris_contig981.16133.1 vs. uniprot
Match: A0A7S1GP37_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GP37_CYCTE)

HSP 1 Score: 129 bits (324), Expect = 2.420e-31
Identity = 65/116 (56.03%), Postives = 86/116 (74.14%), Query Frame = 1 
Query:  787 RGAIQASKGQAFFLVFCTALSFATLALVLQIQF-----PAIGN-YWFLLTLLSPYAGVYYWQNGSRNDKAQVRLETSDDETMTEIYITGAAEELDRLSKTMGYMEKGMIRVKGLLE 1116
            RG +Q S  QAFFL FCTAL  A+LALVLQIQF     P IG   WFLLTLLSPYAG+YYW++G R D  +V+L T+++ET  EI + G+ EE++R+ +T+G+ EKGM++V G+ E
Sbjct:   64 RGLVQRSLSQAFFLTFCTALGMASLALVLQIQFQNLVIPGIGEPNWFLLTLLSPYAGIYYWKSGDRVDDCEVKLSTNEEETENEILVQGSDEEIERMWRTLGWAEKGMVKVAGIFE 179
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BLAST of mRNA_P-lacustris_contig981.16133.1 vs. uniprot
Match: A0A7R9ZEM2_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZEM2_9STRA)

HSP 1 Score: 130 bits (326), Expect = 3.850e-31
Identity = 66/117 (56.41%), Postives = 87/117 (74.36%), Query Frame = 1 
Query:  787 RGAIQASKGQAFFLVFCTALSFATLALVLQIQF-----PAIGN-YWFLLTLLSPYAGVYYWQNGSRNDKAQVRLETSDDETMTEIYITGAAEELDRLSKTMGYMEKGMIRVKGLLEG 1119
            +G +Q S  QAFFLVFCTAL  A+LALVLQIQF     PAIG   W+ L LLSPYAG+YYW++G R D+ +V+L T+DDET+ E+ I G  +ELDR+ + +   EKGM++V+GLL+G
Sbjct:  103 KGLVQQSTSQAFFLVFCTALGLASLALVLQIQFQDLVLPAIGKPNWYYLVLLSPYAGIYYWKSGDREDEIKVKLATNDDETLNEVTIEGNDDELDRMWRALDLREKGMVKVEGLLQG 219
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BLAST of mRNA_P-lacustris_contig981.16133.1 vs. uniprot
Match: A0A7S3NJ09_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NJ09_9STRA)

HSP 1 Score: 127 bits (319), Expect = 7.200e-30
Identity = 57/110 (51.82%), Postives = 84/110 (76.36%), Query Frame = 1 
Query:  787 RGAIQASKGQAFFLVFCTALSFATLALVLQIQFPAIGNYWFLLTLLSPYAGVYYWQNGSRNDKAQVRLETSDDETMTEIYITGAAEELDRLSKTMGYMEKGMIRVKGLLE 1116
            +G  ++SK QAFFL FCT +  A+LALVLQ+QFPAIG+YWFL+TL+SPYAG+YYWQN   +++ +V+LE  DD+    + + G  E+++R+++ M   E+GM+RVKG+ E
Sbjct:  133 KGLTESSKSQAFFLSFCTFIGLASLALVLQVQFPAIGSYWFLMTLISPYAGIYYWQNAQNDNEFKVKLEERDDQAKA-LLVRGGKEDVERMARVMDLREEGMVRVKGIFE 241
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BLAST of mRNA_P-lacustris_contig981.16133.1 vs. uniprot
Match: B8LDY3_THAPS (Predicted protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LDY3_THAPS)

HSP 1 Score: 124 bits (311), Expect = 1.970e-29
Identity = 60/109 (55.05%), Postives = 80/109 (73.39%), Query Frame = 1 
Query:  787 RGAIQASKGQAFFLVFCTALSFATLALVLQIQFPAIGNYWFLLTLLSPYAGVYYWQNGSRNDKAQVRLETSDDETMTEIYITGAAEELDRLSKTMGYMEKGMIRVKGLL 1113
            RG +  S  QAFFL FCTAL  A+LALVLQIQF  +   WF LTLLSPYAG+YYW++G R D  +V+L  +DD+T+ EI I G  EE++R+ +T+   EKGM++V+G+L
Sbjct:   78 RGLVARSTSQAFFLTFCTALGMASLALVLQIQFQDVDFNWFYLTLLSPYAGIYYWRSGDRVDDMKVKLAANDDDTLNEITIEGNDEEIERMWRTLDLQEKGMVKVEGIL 186
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BLAST of mRNA_P-lacustris_contig981.16133.1 vs. uniprot
Match: K0SQW6_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SQW6_THAOC)

HSP 1 Score: 127 bits (319), Expect = 2.020e-29
Identity = 70/152 (46.05%), Postives = 94/152 (61.84%), Query Frame = 1 
Query:  673 PGVNGKGGGVGAADGRKNHRVFPSEQLQDKGSWRDHHVRGAIQASKGQAFFLVFCTALSFATLALVLQIQF-----PAIGN-YWFLLTLLSPYAGVYYWQNGSRNDKAQVRLETSDDETMTEIYITGAAEELDRLSKTMGYMEKGMIRVKGL 1110
            PG N +GG        +      +   +   +      +G +Q SK QAFFL FCTAL  A+LALVLQIQF     P IG   WFLLTLLSPYAG+YYW++G R D  +V+L ++DD+TM EI + G  EE+DR+ + +   EKGM+RV+G+
Sbjct:  135 PGENAEGGKTQRQQAGEIMAYMKANNYEVADAGEKIIFKGLVQQSKSQAFFLTFCTALGMASLALVLQIQFQDLELPVIGKPNWFLLTLLSPYAGIYYWRSGDRVDDFEVKLSSNDDDTMNEITVQGNDEEIDRMWRALELQEKGMVRVEGV 286
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BLAST of mRNA_P-lacustris_contig981.16133.1 vs. uniprot
Match: A0A7S1VVB4_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VVB4_9STRA)

HSP 1 Score: 125 bits (313), Expect = 7.110e-29
Identity = 65/116 (56.03%), Postives = 84/116 (72.41%), Query Frame = 1 
Query:  787 RGAIQASKGQAFFLVFCTALSFATLALVLQIQF-----PAIGN-YWFLLTLLSPYAGVYYWQNGSRNDKAQVRLETSDDETMTEIYITGAAEELDRLSKTMGYMEKGMIRVKGLLE 1116
            RG +Q S  QAFFLVFCTAL  A+LALVL IQF     P IG   W+ L LLSPYAGVYYW+ G R D  +V+L  +DD+T  EI + G+ EEL+R+ +T+G+ EKGMI+V+G+L+
Sbjct:  143 RGLVQRSVSQAFFLVFCTALGMASLALVLDIQFQDAVLPMIGKPNWYFLVLLSPYAGVYYWKAGDRVDDCEVKLTANDDDTENEIAVQGSEEELERMWRTLGWQEKGMIKVEGVLD 258
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BLAST of mRNA_P-lacustris_contig981.16133.1 vs. uniprot
Match: A0A7S2B231_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B231_9STRA)

HSP 1 Score: 124 bits (312), Expect = 1.100e-28
Identity = 59/110 (53.64%), Postives = 79/110 (71.82%), Query Frame = 1 
Query:  787 RGAIQASKGQAFFLVFCTALSFATLALVLQIQFPAIGNYWFLLTLLSPYAGVYYWQNGSRNDKAQVRLETSDDETMTEIYITGAAEELDRLSKTMGYMEKGMIRVKGLLE 1116
            +G  Q S  QAFFL FCT +   +L+LVLQIQ P +G YW+L+ L SPYAGVYYWQN  ++D+ +VRL+ +DD+   E+ I G  E+L+R  +T+ Y EKGMIRVKG+ E
Sbjct:  156 KGVTQQSTSQAFFLSFCTLIGLGSLSLVLQIQVPQVGAYWWLMCLGSPYAGVYYWQNAQQDDEIRVRLQATDDDKECEVTIQGDKEQLERFQQTLQYNEKGMIRVKGIFE 265
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig981.16133.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHH2_ECTSI1.870e-7974.02CPLD51 protein required for cyt b6 assembly n=2 Ta... [more]
A0A835YMB8_9STRA7.950e-4372.48CPLD51 protein required for cyt b6 assembly n=1 Ta... [more]
A0A7R9UFF5_9STRA1.670e-3158.18Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S1GP37_CYCTE2.420e-3156.03Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7R9ZEM2_9STRA3.850e-3156.41Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S3NJ09_9STRA7.200e-3051.82Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
B8LDY3_THAPS1.970e-2955.05Predicted protein (Fragment) n=1 Tax=Thalassiosira... [more]
K0SQW6_THAOC2.020e-2946.05Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S1VVB4_9STRA7.110e-2956.03Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S2B231_9STRA1.100e-2853.64Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig981contigP-lacustris_contig981:38858..44203 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score263.8
Seed ortholog evalue8.8e-68
Seed eggNOG ortholog2880.D8LHH2
Preferred nameCCB1
Hectar predicted targeting categorysignal peptide
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009507,GO:0009536,GO:0009987,GO:0010190,GO:0016043,GO:0017004,GO:0022607,GO:0034622,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0071840
EggNOG free text desc.Cofactor assembly of complex C subunit B
EggNOG OGs2AZTV@1,2QR1Q@2759
Ec32 ortholog descriptionCPLD51 protein required for cyt b6 assembly
Ec32 orthologEc-11_004090.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size1614
Cds size834
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig981.16133.1prot_P-lacustris_contig981.16133.1Pleurocladia lacustris SAG_25_93polypeptideP-lacustris_contig981 40313..44022 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817414.0414617-UTR-P-lacustris_contig981:38857..394361622817414.0414617-UTR-P-lacustris_contig981:38857..39436Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig981 38858..39436 -
1693495049.6609938-UTR-P-lacustris_contig981:38857..394361693495049.6609938-UTR-P-lacustris_contig981:38857..39436Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig981 38858..39436 -
1622817414.0527565-UTR-P-lacustris_contig981:40292..403121622817414.0527565-UTR-P-lacustris_contig981:40292..40312Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig981 40293..40312 -
1693495049.6766925-UTR-P-lacustris_contig981:40292..403121693495049.6766925-UTR-P-lacustris_contig981:40292..40312Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig981 40293..40312 -
1622817414.1259992-UTR-P-lacustris_contig981:44022..442031622817414.1259992-UTR-P-lacustris_contig981:44022..44203Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig981 44023..44203 -
1693495049.7652097-UTR-P-lacustris_contig981:44022..442031693495049.7652097-UTR-P-lacustris_contig981:44022..44203Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig981 44023..44203 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817414.0651217-CDS-P-lacustris_contig981:40312..403921622817414.0651217-CDS-P-lacustris_contig981:40312..40392Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig981 40313..40392 -
1693495049.697873-CDS-P-lacustris_contig981:40312..403921693495049.697873-CDS-P-lacustris_contig981:40312..40392Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig981 40313..40392 -
1622817414.0777516-CDS-P-lacustris_contig981:41237..413891622817414.0777516-CDS-P-lacustris_contig981:41237..41389Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig981 41238..41389 -
1693495049.7146256-CDS-P-lacustris_contig981:41237..413891693495049.7146256-CDS-P-lacustris_contig981:41237..41389Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig981 41238..41389 -
1622817414.0882516-CDS-P-lacustris_contig981:41800..419411622817414.0882516-CDS-P-lacustris_contig981:41800..41941Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig981 41801..41941 -
1693495049.7305863-CDS-P-lacustris_contig981:41800..419411693495049.7305863-CDS-P-lacustris_contig981:41800..41941Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig981 41801..41941 -
1622817414.0995424-CDS-P-lacustris_contig981:42405..426971622817414.0995424-CDS-P-lacustris_contig981:42405..42697Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig981 42406..42697 -
1693495049.740969-CDS-P-lacustris_contig981:42405..426971693495049.740969-CDS-P-lacustris_contig981:42405..42697Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig981 42406..42697 -
1622817414.1112247-CDS-P-lacustris_contig981:43853..440221622817414.1112247-CDS-P-lacustris_contig981:43853..44022Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig981 43854..44022 -
1693495049.7555165-CDS-P-lacustris_contig981:43853..440221693495049.7555165-CDS-P-lacustris_contig981:43853..44022Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig981 43854..44022 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-lacustris_contig981.16133.1

>prot_P-lacustris_contig981.16133.1 ID=prot_P-lacustris_contig981.16133.1|Name=mRNA_P-lacustris_contig981.16133.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=278bp
MTRRARSTLIMALTTAVGLATSSQGFRTATVAGTSGFIANTGGSFFSINR
GRSVCSRRARAAYQTTQRDWHPTVQTTGLLLSMVIAPSEVADVAITAHDA
VSVALPTFLLSGEMAAEAAGSVGYSKFSYYTTLGLYVLSFPGLWSVVKRA
TKTKYKDATYELPGPASTEKGAESVQQTAAKIIAYFQANNYKIKEAGETI
TFEGPSRRARARRSSWCSARPCRSRRWRSCCRSSSLPSATTGSCSLSCLP
TLACTTGKTALGTIRRRCGWRHRTTRP*
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mRNA from alignment at P-lacustris_contig981:38858..44203-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-lacustris_contig981.16133.1 ID=mRNA_P-lacustris_contig981.16133.1|Name=mRNA_P-lacustris_contig981.16133.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=5346bp|location=Sequence derived from alignment at P-lacustris_contig981:38858..44203- (Pleurocladia lacustris SAG_25_93)
GAAAGGCGTCGTCGTAGCCGATGTTTTTCACCTGCCTGACCGCACATCAC
TTCGGACACGTAGCTAGCGACAGACCATAATTACCTGGTTCCGTCCCTTA
CCCATTCCTTTGAGACCTATACCAAAGCTCGGTGAGCTGAACCAACCGAG
AGGGTGGGAGAGTGAGTGAGCAAAATCAATCATGACGCGAAGGGCGCGGA
GCACGCTGATAATGGCTCTGACCACAGCGGTCGGTCTGGCCACCTCTAGC
CAAGGCTTCCGTACGGCGACGGTGGCGGGAACCTCAGGGTTTATCGCGAA
CACTGGTGGTTCGTTCTTCTCCATCAATCGCGGGCGGTCGGTGTGTTCAC
GTGAGTTGTTGTTGCTTGTCGTTTGTTCAGCGCATATTATGCTACCAACA
ACGTGACCAGGTTGAACGTTGTACAACGGTCCCGCCCTGAGGTGTCGGTT
TCTCAAGGCACTGCTGACTTACTGGCTTCAAGCGAGGTGCCTCACTACGG
CTGAATGTGGGCAATGAAAAATACCTTACTCGAACCATTGAAAGCATGTG
CAGCACATGGCGATACAGCAGTCCCTTATTGGAATCAGTGAAAACATGTG
CAGCACATCGCGATACAGCAGTCCCCCTCGCCAACTCAGGTTGTCGAGTT
GAGCCGCATTTCATGCGTAAACTGTCAGAGGCAACCAGCACTGTACAGTG
CTGCGATATGATGAATAAGACGAGCAAGAGCAGGCTCTATTGGGCGGTCA
TATTTCTGGCTCCCGTCCTTGAAAGTTTCTCTGTCGACTGGCTGTCCCAC
GTCCCATGTAGAGCAGGTGGTGTCGTTTGCAAGTGTCTCGCGGCGGCGAA
TGCTCCTGCAGTATGGCCATGACACCTTCGCAGCTGTCGTCGTCTAGAAG
ACTCCCATAGGCACGCCATCCGCAATCACAGCAGTAAAGCTGGGAGGTGA
TGCGAGCATCTCTACCTTCTCGGCATGCCGGTCAATCTGTCGCTATTTGA
TGAGCACGGTGCTCGACCACTAATATTCTCCAAGCAGCCCACCTTCGAGA
GCATATTTACATGCAATTTGTCTTCTGCGACTGAAGGAGCATCCGTTCAC
AACTGTCTGCATCCTTGCTCCCTCCCTTCCTCCTCCTTCCTCTTCCCTCC
CTCTCCTGCCTCTGTGGATATGCTGACGAAGAGGCTGTCTCGTCCTTCTT
GCATATTGCTACATATATTCAGTATGGAAGCATGGTGTTAACTCTACATG
CCGCAAAAGGCTTGGTTTCCGGTGACGAGACCCTCGACGACTTTGGGCAC
TTGAAACTTCGATTGCTGTTGTCGTTGCTTCCGACCTCAACTCCAAGTTT
CTAGCCCGTGGTCACAAGCCAGTCACAAAACGTATGCCAGACGGTTGTTG
TGCTCCTACATTTTCATCTGTCTGCCTCTCCCTTGCTCCCCTCCTCTACC
CCTCTCTATCTCGCACAAATGCACGACTTTCCTCTCTGTCCTTCTTTTTC
TGCCAGGGAGAGCGCGCGCGGCCTACCAAACAACCCAGCGGGATTGGCAC
CCCACCGTTCAAACCACGGGACTGCTGCTGTCCATGGTGATTGCTCCCTC
CGAAGTCGCAGATGTTGCAATCACCGCCCACGACGCGGTGTCGGTCGCTC
TGCCCACGTTCCTTCTTTCGGGTGAAATGGCAGCGGAAGCGGCGGGGAGC
GTGGGGTACTCCAAGTTTAGCTACTACACCACGCTGGGGCTGTACGTTTT
GTCGTTCCCGGGCTTGTGGTCCGTCGTGAAGCGGGCGACGAAGACTAAGT
GAGTTGGGTGCTTTCGGCTGCTCATGGCGCCGGGTTTTTTCGCCATGCGT
CAGTGGCAGAGGATCGATGGAGTCTTGGTATCCTATGGCTGTTTTCTGTT
CGTCGGTCGCAACTTTTTCTGTATTTGATTTTGTTGCGGTGCGTGTATGT
CGGCGTCTCTCAGCAACCAGAATAAAGCACCGAGCAGAACTAACTCCATC
ACTTCCTGCATCGCCCGCGGCGTGGTTGGTGTCCCTTTATATTCCGAACA
GGTGGTTTTATGCATATGCCCAAACACCCGCTCCTATGCCCTTGTGCAGA
GTATCAAGAGCCAAACAAGGGTGTACTTACCCGCCCCCTTTCTCCTTCCT
GACGCTCTCATGGAGATACTGGAAAGATGCACGCTAGTAGTGAGGTTAGA
CTTTGGAAGCTGTGAGAGGCGTTCTCACCCCCCTTTCCCCCCCTATCTGT
CTTTCTTTCAAGATACAAGGACGCCACGTACGAGCTCCCCGGCCCGGCGT
CAACGGAAAAGGGGGCGGAGTCGGTGCAGCAGACGGCCGCAAAAATCATC
GCGTATTTCCAAGCGAACAACTACAAGATAAAGGAAGCTGGAGAGACCAT
CACGTGAGTGCGCCGAGAGGGTGCAGAGAGTGTGTTGAGAGGTGCAGGCA
TCACCACACACGGAGAAAATGTCTTGCACACCCTGTCTCGTGTCTCCGGC
ACTCTCTTTCTGGTGGGGCGCATCGTGCTCCAGCAGGAGCGACAAATTCA
TGTTTGCGGTTTACGTGCGCCGGAGGGCAGCGAATGTATCAGCAAACGGT
TCGACAATAAATCTATTGACGCGTGAGTATTGTACGGCGTAATCTTTTTT
GTACTCTTGCATGCATATAGCACACAATAACAAGACGTGGGTGCGTTGGG
TGCTCTTTTCGGCTTGCTGAGGTCGTTGGCAAGACACATCGCTCGAAGCG
TAAAGGTGTACATTACGTCGTGGCCCTGACTTTCCGCTTGTGCTTTTTCG
TTTGCGTGCTTCAGGTTCGAGGGGCCATCCAGGCGAGCAAGGGCCAGGCG
TTCTTCTTGGTGTTCTGCACGGCCCTGTCGTTCGCGACGCTGGCGCTCGT
GCTGCAGATCCAGTTCCCTGCCATCGGCAACTACTGGTTCCTGCTCACTC
TCCTGTCTCCCTACGCGTGAGTGTTAGTCTATGCATGCAACTACTTCTCT
CTCGAATGGCCGGTGATTTCCACCCTAAAGCTTTTGCCACAAGAGATGGT
GACCCGATTTCGTGTGCGTTGCGGGCGTGCGTCGTCCTCCCTACGGAAAT
CGAGACCAACGAAGAACTCGGGACTGTACAATAGAGGTAGCATTACTGAC
CTTTTTGTGATTGTGAAGGTCGGCATGAACGAGCTCATGGGAACTACCGC
TGTCTTTTTTGGAGTAGAGAAAAGCAAAGAAGAAAATGCCTTCGCTCCTC
CCGGCACCTCCACGTTCAGCGTGGACAGGCATGCGTGATTTGCTGTTGCC
CATTCTCCGCTGGCGTTTGCTGCGTCTGAGGCGTCGCTTGAGAGTTTTCG
CGTCCACTCCCAAAGTTGTGCGGGGGCATAGTGTTGAGTGTCCTGGAGCA
CAGAACGTATTGGTCGTGCAATGGGGGCAGCAATGATGTGCGACAATGCC
AACAAGGCCATATCAATGTAGGTGCTTTCATGTCATGGGTGGTTGAGGAA
ACGGACCGGGATATGCTTGTCCGAAAATTCAAAATTCCACGTGGGCATGT
GGCAGTCATACACACGGGCGATTTCCCCCCTTGGCCCTCTTCGCCCCCCA
GTTCATTCTTGGCGGTGTGAAGGAACAGCAGTGCGTGAAGCCACTCGCCC
GTGGAAGATTTCCCCCTTTTCGTTGCTCCCTGCTTTCCCGTCCAATGCAC
CGGGGGTACTCGTCAATCGACCGTATGTACCCTATCCATTCACTTGGTCG
CTTGAATTGTTTTCTTATGTTTCCGTGGCCCCTATATTGGTCTCGTCTTG
TATTGTTTTAGTGGCGTGTACTACTGGCAAAACGGCTCTAGGAACGATAA
GGCGCAGGTGCGGCTGGAGACATCGGACGACGAGACCATGACGGAGATTT
ACATCACAGGGGTGAGCGAGAGGCCTCTGCATACACCGCGCTTTTCTTGT
GTGGACCCTTTTTTTTTCTGTGCTTCCTACACTCTTTTGTGCTCGGCAAA
GCGGCCGTACTTTGCTGTGCTTCACGTCTTGTTCATTGCTGCGCGTGTGT
TCGCCGCCTAACGTGTCTGCCACGCGATAGCGTTTGCGTGGGGGCGGTGA
CTACGAAGGCTGACTCGGTGTCCTCTAGAACGTACGCGATCAAAAGCCGA
AGGATAAAAGCCCTCCGTTGTTGAAAGACAGTGTCGTGGCACGCTTAACG
TTGCTTCGACCTTGTCTAAGAATTTTTCTCCAATTCAGCATGCCCTTGTG
TACATCATCCTCACGAGATTATTTCTCCGAGTCGCCGTCATCCGCCTGGG
AATAGATACAGCCCTTGTTTCCCCGTAGAACTGATATGCATATGGACGGC
GAGGTTAAGACGTCGAAAATACGAATCCTCGAGACACTACCACAAGATAA
GTCGGTGACGTTTTTCTTCTCAAGAAATAGCGTGAAGCCGCCGACAGCAA
TACGCATTCCTTTGAAGTATAAACCCACGCTATACCCGATAGTGGTAGAA
ATATTGGTGTTTCCGCCGCAAAACCGTATGTGGATGTCAGTAGTCCTGAA
ATGAACGGGACACGCAAGATGAGACTATCTGGAGTCTGCAACATAACACG
CTGCATTGCTGTTGGTCGATGATACAAGATTGAGTTCCAGTCTACGGGAG
AGCCTTTAAATGGGTGAGGTTGACAGAACCGCAAACACGCTCTTGTCGTC
TGTTGGAATGCATACCTTTCATTACGTTAACGCTTGAAATTCCGTTTCGT
AAATCCCGCAACGCAAGGCGGCGGAGGAATTGGACCGCTTGTCCAAGACC
ATGGGGTACATGGAGAAGGGCATGATCAGAGTCAAGGGGCTGCTCGAGGG
GAAGGCCCAAAAGTCTCTGTCGTGCCGGCAGTGCCTGTCGCCGCTGCGGC
TGTTGAAGAACCAGCAGAGACGCAAGCGTAGTTTTTAGGTTGCCATTTGA
TTCAAGTCGATAGGCGTAGCCAATGGTTCCTTGTTTTTCAGTGTCTCAGC
TCGTGTCTTGTCATGAAATGACCAATCGGGCCCTCTCGCTTTGCAAACTT
CCTCGCGCGGACAAGCGAATGGTAGGGTCGTCTCGTCTGTTCGCTTCGAG
AATGTGGTGGTCCGTGTGGTGTGTCTACAACGCTGTGATGGTGCGTACCG
TGCTTGAGACGGGACGTTGTCATAGTGGCGGCGCGACGATATATATGCTC
AGGCAAAGGTGTTGATAGACTGACACATGAAGGACAACGTTGCGCTTGAT
ATTGTTTCAGCGACCACAGCCTATGTTTGCTTCAGCGGAAGCCATGTGTG
CCTACATGAGGCAACATTCGACATTCGTGGCATGCATGAGCCCATC
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Coding sequence (CDS) from alignment at P-lacustris_contig981:38858..44203-

>mRNA_P-lacustris_contig981.16133.1 ID=mRNA_P-lacustris_contig981.16133.1|Name=mRNA_P-lacustris_contig981.16133.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=1668bp|location=Sequence derived from alignment at P-lacustris_contig981:38858..44203- (Pleurocladia lacustris SAG_25_93)
ATGACGCGAAGGGCGCGGAGCACGCTGATAATGGCTCTGACCACAGCGGT
CGGTCTGGCCACCTCTAGCCAAGGCTTCCGTACGGCGACGGTGGCGGGAA
CCTCAGGGTTTATCGCGAACACTGGTGGTTCGTTCTTCTCCATCAATCGC
GGGCGGTCGGTGTGTTCACATGACGCGAAGGGCGCGGAGCACGCTGATAA
TGGCTCTGACCACAGCGGTCGGTCTGGCCACCTCTAGCCAAGGCTTCCGT
ACGGCGACGGTGGCGGGAACCTCAGGGTTTATCGCGAACACTGGTGGTTC
GTTCTTCTCCATCAATCGCGGGCGGTCGGTGTGTTCACGGAGAGCGCGCG
CGGCCTACCAAACAACCCAGCGGGATTGGCACCCCACCGTTCAAACCACG
GGACTGCTGCTGTCCATGGTGATTGCTCCCTCCGAAGTCGCAGATGTTGC
AATCACCGCCCACGACGCGGTGTCGGTCGCTCTGCCCACGTTCCTTCTTT
CGGGTGAAATGGCAGCGGAAGCGGCGGGGAGCGTGGGGTACTCCAAGTTT
AGCTACTACACCACGCTGGGGCTGTACGTTTTGTCGTTCCCGGGCTTGTG
GTCCGTCGTGAAGCGGGCGACGAAGACTAAGGAGAGCGCGCGCGGCCTAC
CAAACAACCCAGCGGGATTGGCACCCCACCGTTCAAACCACGGGACTGCT
GCTGTCCATGGTGATTGCTCCCTCCGAAGTCGCAGATGTTGCAATCACCG
CCCACGACGCGGTGTCGGTCGCTCTGCCCACGTTCCTTCTTTCGGGTGAA
ATGGCAGCGGAAGCGGCGGGGAGCGTGGGGTACTCCAAGTTTAGCTACTA
CACCACGCTGGGGCTGTACGTTTTGTCGTTCCCGGGCTTGTGGTCCGTCG
TGAAGCGGGCGACGAAGACTAAATACAAGGACGCCACGTACGAGCTCCCC
GGCCCGGCGTCAACGGAAAAGGGGGCGGAGTCGGTGCAGCAGACGGCCGC
AAAAATCATCGCGTATTTCCAAGCGAACAACTACAAGATAAAGGAAGCTG
GAGAGACCATCACATACAAGGACGCCACGTACGAGCTCCCCGGCCCGGCG
TCAACGGAAAAGGGGGCGGAGTCGGTGCAGCAGACGGCCGCAAAAATCAT
CGCGTATTTCCAAGCGAACAACTACAAGATAAAGGAAGCTGGAGAGACCA
TCACGTTCGAGGGGCCATCCAGGCGAGCAAGGGCCAGGCGTTCTTCTTGG
TGTTCTGCACGGCCCTGTCGTTCGCGACGCTGGCGCTCGTGCTGCAGATC
CAGTTCCCTGCCATCGGCAACTACTGGTTCCTGCTCACTCTCCTGTCTCC
CTACGCGTTCGAGGGGCCATCCAGGCGAGCAAGGGCCAGGCGTTCTTCTT
GGTGTTCTGCACGGCCCTGTCGTTCGCGACGCTGGCGCTCGTGCTGCAGA
TCCAGTTCCCTGCCATCGGCAACTACTGGTTCCTGCTCACTCTCCTGTCT
CCCTACGCTGGCGTGTACTACTGGCAAAACGGCTCTAGGAACGATAAGGC
GCAGGTGCGGCTGGAGACATCGGACGACGAGACCATGATGGCGTGTACTA
CTGGCAAAACGGCTCTAGGAACGATAAGGCGCAGGTGCGGCTGGAGACAT
CGGACGACGAGACCATGA
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