prot_P-lacustris_contig963.15978.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig963.15978.1
Unique Nameprot_P-lacustris_contig963.15978.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length265
Homology
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BLAST of mRNA_P-lacustris_contig963.15978.1 vs. uniprot
Match: D7FML7_ECTSI (WW domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FML7_ECTSI)

HSP 1 Score: 162 bits (410), Expect = 1.270e-41
Identity = 119/224 (53.12%), Postives = 132/224 (58.93%), Query Frame = 0 
Query:    1 MAAYAANMNRPPGWNGELQELQDETMRLLNAVRADSC-SRRQEQQPTRHGTRN----------AGKSAPRAVRRDMTKAEGSVVRSGKKKSTXXXXXXXXXXXXXXXXXREHDSSSPPGQKRFSYTLDTSRWPSGNEVETPGLPPSEQGVGKTTVEVLDRGEDSPRPLPLSGGPCGDASSSPATPNVSQAAALANAGEGERRFRLLSFKDEERRVRDELDTFVP 213
            MAA AAN  RP GW+GELQ+LQDETMRLL+ +R DS  SRRQEQ                    G++   A   + T A             XXXXXXXXXX             S  G KRFSYTLDTS WP GNE  +  L  S+ G+GKTTVEVLDRGE++PR  PL+  P GD   S ATP VSQA ALA AGE E RFR LSFKDEE RVRD  DTFVP
Sbjct:    1 MAANAANTIRPAGWSGELQQLQDETMRLLHTIRGDSSGSRRQEQXXXXXXXXXXXXXXXXXXXGGRTLGHACSGETTTAXXXXXXXXXXXXXXXXXXXXXXXPSRDNPGGSQGHDSANGSKRFSYTLDTSGWPRGNETGSSHLQASDMGMGKTTVEVLDRGEETPRTPPLADRPAGDILPSQATPKVSQATALAAAGEYEGRFRSLSFKDEEGRVRDGFDTFVP 224
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig963.15978.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FML7_ECTSI1.270e-4153.13WW domain-containing protein n=1 Tax=Ectocarpus si... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig963contigP-lacustris_contig963:25188..29180 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig963.15978.1mRNA_P-lacustris_contig963.15978.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig963 25188..31682 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig963.15978.1 ID=prot_P-lacustris_contig963.15978.1|Name=mRNA_P-lacustris_contig963.15978.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=265bp
MAAYAANMNRPPGWNGELQELQDETMRLLNAVRADSCSRRQEQQPTRHGT
RNAGKSAPRAVRRDMTKAEGSVVRSGKKKSTRASRRDRRRRRASRDASRE
HDSSSPPGQKRFSYTLDTSRWPSGNEVETPGLPPSEQGVGKTTVEVLDRG
EDSPRPLPLSGGPCGDASSSPATPNVSQAAALANAGEGERRFRLLSFKDE
ERRVRDELDTFVPLRSGHLGKNCRSSEPSVKDWRASKRNKEKNAEGRKDR
SSSASLDGSGSGQT*
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