prot_P-lacustris_contig958.15943.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig958.15943.1
Unique Nameprot_P-lacustris_contig958.15943.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length180
Homology
BLAST of mRNA_P-lacustris_contig958.15943.1 vs. uniprot
Match: A0A6H5L8M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8M0_9PHAE)

HSP 1 Score: 122 bits (305), Expect = 5.310e-29
Identity = 71/158 (44.94%), Postives = 86/158 (54.43%), Query Frame = 0
Query:   19 DGPGTSASSWTGGRRKGQLTQQASSCHGCRNTKPTGQARHACQGGDLEGDEMRGCNYWLCHRCMGKWMGVSGEQEDSGAVYIRGRSGARALTEQQSCFRGGSIQASAEPSGMNRCVRVPDRNLISHGRIDNS-LSHTPLRTGHGLLGVHIEQPKPCGG 175
            DGPGTSAS+ TGGRRKGQL QQAS+CHGCR  KPTG  RHACQGGD EG E RGCNYW+C +CMG+WM  SG+          GR       E   C    S + S       + V V DR+ ++  R +++ +   P  T           P P  G
Sbjct:  233 DGPGTSASTSTGGRRKGQLAQQASTCHGCRINKPTGNVRHACQGGD-EGGEARGCNYWVCQKCMGRWMQASGQPRGFWCCLHSGR-------EWCPCAERVSTKRS-------KTVSVVDRSRLAQNRQESTDVYEFPTTTSSPTAATTAASPTPPSG 375          
BLAST of mRNA_P-lacustris_contig958.15943.1 vs. uniprot
Match: A0A6H5L6Z2_9PHAE (CxC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6Z2_9PHAE)

HSP 1 Score: 117 bits (293), Expect = 2.950e-27
Identity = 70/158 (44.30%), Postives = 85/158 (53.80%), Query Frame = 0
Query:   19 DGPGTSASSWTGGRRKGQLTQQASSCHGCRNTKPTGQARHACQGGDLEGDEMRGCNYWLCHRCMGKWMGVSGEQEDSGAVYIRGRSGARALTEQQSCFRGGSIQASAEPSGMNRCVRVPDRNLISHGRIDNS-LSHTPLRTGHGLLGVHIEQPKPCGG 175
            DGPGTSAS+ TGGRRKGQL QQAS+CHGCR  KPTG  RHACQGGD EG E RGCNYW+  +CMG+WM  SG+          GR       E   C    S + S       + V V DR+ ++  R +++ +   P  T           P P  G
Sbjct:  149 DGPGTSASTSTGGRRKGQLAQQASTCHGCRINKPTGNVRHACQGGD-EGGEARGCNYWVRQKCMGRWMQASGQPRGFWCCLHSGR-------EWCPCAERISTKRS-------KAVSVVDRSRLAQNRQESTDVYEFPTTTSSPTAATTAASPTPPSG 291          
BLAST of mRNA_P-lacustris_contig958.15943.1 vs. uniprot
Match: D7FN79_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN79_ECTSI)

HSP 1 Score: 66.6 bits (161), Expect = 1.280e-9
Identity = 35/69 (50.72%), Postives = 42/69 (60.87%), Query Frame = 0
Query:   22 GTSASSWTGGRRKGQLTQQASSCHGCRNTKPTGQARHACQGGDLEGDEMRGCNYWLCHRCMGKWMGVSG 90
            G S+S  TGGRRKGQL +QA SCHGCR  KP    ++AC    ++G   R  NYWLC  C  +W   SG
Sbjct:  210 GMSSSVSTGGRRKGQLREQAKSCHGCRTNKPGQGIKYAC----VDGRNPR-WNYWLCKSCFKEWTEASG 273          
BLAST of mRNA_P-lacustris_contig958.15943.1 vs. uniprot
Match: A0A6H5KAW8_9PHAE (CxC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAW8_9PHAE)

HSP 1 Score: 60.5 bits (145), Expect = 1.770e-7
Identity = 31/67 (46.27%), Postives = 40/67 (59.70%), Query Frame = 0
Query:   24 SASSWTGGRRKGQLTQQASSCHGCRNTKPTGQARHACQGGDLEGDEMRGCNYWLCHRCMGKWMGVSG 90
            S+S  TGGRRKGQLT++A +CH CR   P    ++AC      GD    C YWLC +C+ +W   SG
Sbjct:    2 SSSVSTGGRRKGQLTEEARTCHECRTKDPRQGIKNAC------GDSA--CCYWLCQKCLERWTEQSG 60          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig958.15943.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5L8M0_9PHAE5.310e-2944.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L6Z2_9PHAE2.950e-2744.30CxC4 domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FN79_ECTSI1.280e-950.72Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KAW8_9PHAE1.770e-746.27CxC4 domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig958contigP-lacustris_contig958:77443..78297 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig958.15943.1mRNA_P-lacustris_contig958.15943.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig958 77367..78919 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig958.15943.1 ID=prot_P-lacustris_contig958.15943.1|Name=mRNA_P-lacustris_contig958.15943.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=180bp
MGTSSYPRKMTARSSHGPDGPGTSASSWTGGRRKGQLTQQASSCHGCRNT
KPTGQARHACQGGDLEGDEMRGCNYWLCHRCMGKWMGVSGEQEDSGAVYI
RGRSGARALTEQQSCFRGGSIQASAEPSGMNRCVRVPDRNLISHGRIDNS
LSHTPLRTGHGLLGVHIEQPKPCGGDQGG*
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