prot_P-lacustris_contig953.15914.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig953.15914.1
Unique Nameprot_P-lacustris_contig953.15914.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length543
Homology
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BLAST of mRNA_P-lacustris_contig953.15914.1 vs. uniprot
Match: D7FI56_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI56_ECTSI)

HSP 1 Score: 496 bits (1278), Expect = 6.370e-168
Identity = 369/575 (64.17%), Postives = 409/575 (71.13%), Query Frame = 0 
Query:    1 MSDMEDNLSDDGFMSDHSFDYVEVEA-TNYSSD-DGTVTSSLAPPKGWSTLSLSDVEDARTGPSAVKDSAAGGRR-----EFISSPTNATSF-PPKAVVINSSTRFV--STGALDCRVCDALLRDCVECPTCHSLFCRDHLRIDKQNA-SPCPCEPCSPASTRRAPFATTIAARAATC------AQRHPAEAFLSNVPVQRMADAVPSGCDGCGVSLSWGELGLHACDQQLVLCKNKELGCRWSGQRHELEAHHISSTCVGRLALTQDETLEARAETARVRAGKEEAERRASSAEMHVSELEARLSLAENNLRQRDDEIAGLKDKMETMTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTIPAP--LGFAAMLNRAGFVPPAAE--------PVRLPPSVPDKKK------AADVAATQTAVPTSSSRASGRGSSSTTIKGGRSVAVQISSGSGESTPAGGSGGVMADTASQAPVPAVEACLKPYLDRPSSLLEKKVVVFWPRQGRWYVGRPTVYKEDTKEHRVEYDDGDVRDHVLAHRSWGLLG 542
            MS M ++ SDDG MSDHSFD+VEVE  T+YSSD D TVTSSLAPPKGWSTLSLSD E  +TGP+AV              EFIS+P  A SF    A V  SSTRF   S  A  CR C  LLRDCVECPTCHSLFCR+HL +DKQN  SPCPCEPCS      AP ATT++A +         A  HP EAFL N+P+QR+ADAVPS CDGCG+SLSWGELG HACDQQLV C  ++ GC W G+RHE EAH  SSTC GRLAL Q E LEAR+E AR+RA                      L+ AE  L++RD E A L+ K+ TMTA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       + FAA+LNRAGF P  A         PVRLP +VPD+KK      AA +A TQT VP+++SRASGRG    T KG  S AVQ++   G  +P   S GVM DTASQAPVPAVEACLKPYL+RPSSLLEKKVVVFWPRQGRWY GRPTVYKE T+EHRVEYDDGDVRDHVLAHRSWGL+G
Sbjct:    1 MSGMLESSSDDGCMSDHSFDFVEVEGGTSYSSDGDATVTSSLAPPKGWSTLSLSDAEAVKTGPAAVTXXXXXXXXXXXXXEFISTPIAAASFCQTAAAVTKSSTRFEPSSLAAFSCRACGNLLRDCVECPTCHSLFCREHLVVDKQNGTSPCPCEPCS-----LAPIATTLSAASTXXXXXXXRAHHHPREAFLPNIPLQRIADAVPSRCDGCGISLSWGELGRHACDQQLVPCGRRQHGCSWFGKRHEREAHEASSTCPGRLALAQAEALEARSEAARLRAAXXXXXXXXXXXXXXXXXXXXXLAAAERCLQERDQEAAALRGKITTMTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAMPFAAILNRAGFSPQTATTXXXXXXAPVRLPLAVPDRKKSGAGSRAAAIATTQTVVPSTASRASGRG----TAKGTLSAAVQMARAGG--SPPRASAGVMMDTASQAPVPAVEACLKPYLERPSSLLEKKVVVFWPRQGRWYTGRPTVYKEATREHRVEYDDGDVRDHVLAHRSWGLIG 564
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig953.15914.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FI56_ECTSI6.370e-16864.17Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 267..308
NoneNo IPR availableCOILSCoilCoilcoord: 320..365
IPR008974TRAF-likeSUPERFAMILY49599TRAF domain-likecoord: 194..242

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig953contigP-lacustris_contig953:19001..23539 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig953.15914.1mRNA_P-lacustris_contig953.15914.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig953 19001..23795 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig953.15914.1 ID=prot_P-lacustris_contig953.15914.1|Name=mRNA_P-lacustris_contig953.15914.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=543bp
MSDMEDNLSDDGFMSDHSFDYVEVEATNYSSDDGTVTSSLAPPKGWSTLS
LSDVEDARTGPSAVKDSAAGGRREFISSPTNATSFPPKAVVINSSTRFVS
TGALDCRVCDALLRDCVECPTCHSLFCRDHLRIDKQNASPCPCEPCSPAS
TRRAPFATTIAARAATCAQRHPAEAFLSNVPVQRMADAVPSGCDGCGVSL
SWGELGLHACDQQLVLCKNKELGCRWSGQRHELEAHHISSTCVGRLALTQ
DETLEARAETARVRAGKEEAERRASSAEMHVSELEARLSLAENNLRQRDD
EIAGLKDKMETMTAAAVVTAEENRKKQDELQQQLEQVAASAAAVAQELKR
TKQQQQQQQQQQQTLRTLPPPPTIPAPLGFAAMLNRAGFVPPAAEPVRLP
PSVPDKKKAADVAATQTAVPTSSSRASGRGSSSTTIKGGRSVAVQISSGS
GESTPAGGSGGVMADTASQAPVPAVEACLKPYLDRPSSLLEKKVVVFWPR
QGRWYVGRPTVYKEDTKEHRVEYDDGDVRDHVLAHRSWGLLG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008974TRAF-like