prot_P-lacustris_contig921.15659.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig921.15659.1
Unique Nameprot_P-lacustris_contig921.15659.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length101
Homology
BLAST of mRNA_P-lacustris_contig921.15659.1 vs. uniprot
Match: A0A6H5JFA4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFA4_9PHAE)

HSP 1 Score: 57.0 bits (136), Expect = 2.660e-7
Identity = 28/34 (82.35%), Postives = 30/34 (88.24%), Query Frame = 0
Query:    9 VTANDEGRVVKLSLYSNNLRGPIPRELGNLTALQ 42
            V AND+GRVVKL L SNNLRGPIP ELGNL+ALQ
Sbjct:   73 VEANDQGRVVKLYLSSNNLRGPIPLELGNLSALQ 106          
BLAST of mRNA_P-lacustris_contig921.15659.1 vs. uniprot
Match: D8LCS7_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS7_ECTSI)

HSP 1 Score: 57.0 bits (136), Expect = 2.890e-7
Identity = 28/38 (73.68%), Postives = 31/38 (81.58%), Query Frame = 0
Query:    9 VTANDEGRVVKLSLYSNNLRGPIPRELGNLTALQRLDL 46
            V  NDEGRVVKL L SNNLRGPIP +LGNL+ L+ LDL
Sbjct:   39 VQVNDEGRVVKLRLKSNNLRGPIPPQLGNLSFLESLDL 76          
BLAST of mRNA_P-lacustris_contig921.15659.1 vs. uniprot
Match: A0A6H5K3D6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3D6_9PHAE)

HSP 1 Score: 53.5 bits (127), Expect = 3.420e-7
Identity = 28/45 (62.22%), Postives = 32/45 (71.11%), Query Frame = 0
Query:    9 VTANDEGRVVKLSLYSNNLRGPIPRELGNLTALQRLDLRANTLSG 53
            V  ND GRVVKLSL  NNL+G IPR+LG+L AL  L+L  N L G
Sbjct:   46 VEVNDAGRVVKLSLRYNNLKGHIPRQLGDLGALMTLNLGVNKLEG 90          
BLAST of mRNA_P-lacustris_contig921.15659.1 vs. uniprot
Match: A0A6H5KME4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KME4_9PHAE)

HSP 1 Score: 50.8 bits (120), Expect = 2.110e-6
Identity = 26/45 (57.78%), Postives = 33/45 (73.33%), Query Frame = 0
Query:    9 VTANDEGRVVKLSLYSNNLRGPIPRELGNLTALQRLDLRANTLSG 53
            V  N +GRVVKLSL  N+L+G IPR+LG+L AL+ L+L  N L G
Sbjct:   20 VEVNSQGRVVKLSLAGNDLQGHIPRQLGDLGALETLNLGFNKLEG 64          
BLAST of mRNA_P-lacustris_contig921.15659.1 vs. uniprot
Match: D7G496_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G496_ECTSI)

HSP 1 Score: 53.5 bits (127), Expect = 4.260e-6
Identity = 25/39 (64.10%), Postives = 31/39 (79.49%), Query Frame = 0
Query:    8 RVTANDEGRVVKLSLYSNNLRGPIPRELGNLTALQRLDL 46
            RV  N +GRVVKLSL++NNL+GPIP E+G L  L+ LDL
Sbjct:  162 RVEVNSQGRVVKLSLWNNNLQGPIPVEVGRLAVLEYLDL 200          
BLAST of mRNA_P-lacustris_contig921.15659.1 vs. uniprot
Match: UPI000B787B24 (inactive leucine-rich repeat receptor-like serine/threonine-protein kinase At5g24100 n=1 Tax=Chenopodium quinoa TaxID=63459 RepID=UPI000B787B24)

HSP 1 Score: 50.1 bits (118), Expect = 9.720e-6
Identity = 23/34 (67.65%), Postives = 27/34 (79.41%), Query Frame = 0
Query:   22 LYSNNLRGPIPRELGNLTALQRLDLRANTLSGPI 55
            LY+NN+RGPIP ELGNLT L  LDL  N+ +GPI
Sbjct:   43 LYNNNIRGPIPSELGNLTNLVSLDLYLNSFNGPI 76          
BLAST of mRNA_P-lacustris_contig921.15659.1 vs. uniprot
Match: D7FUH5_ECTSI (Leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUH5_ECTSI)

HSP 1 Score: 51.6 bits (122), Expect = 1.710e-5
Identity = 25/36 (69.44%), Postives = 29/36 (80.56%), Query Frame = 0
Query:    9 VTANDEGRVVKLSLYSNNLRGPIPRELGNLTALQRL 44
            V  N EGRVVKLSLY+NNL+G +P +LGNL ALQ L
Sbjct:   39 VDVNAEGRVVKLSLYNNNLQGSLPPQLGNLGALQHL 74          
BLAST of mRNA_P-lacustris_contig921.15659.1 vs. uniprot
Match: A0A7X4IRU2_9BACT (Uncharacterized protein n=2 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7X4IRU2_9BACT)

HSP 1 Score: 50.8 bits (120), Expect = 4.150e-5
Identity = 26/46 (56.52%), Postives = 30/46 (65.22%), Query Frame = 0
Query:    9 VTANDEGRVVKLSLYSNNLRGPIPRELGNLTALQRLDLRANTLSGP 54
            V  N  GRVV L LY NNL+G I  E+GNLTAL+ L+L  N   GP
Sbjct:  698 VQVNRSGRVVSLDLYKNNLKGRISPEIGNLTALETLNLGRNWRPGP 743          
BLAST of mRNA_P-lacustris_contig921.15659.1 vs. uniprot
Match: A0A6H5L6T0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6T0_9PHAE)

HSP 1 Score: 49.7 bits (117), Expect = 6.230e-5
Identity = 24/36 (66.67%), Postives = 28/36 (77.78%), Query Frame = 0
Query:    9 VTANDEGRVVKLSLYSNNLRGPIPRELGNLTALQRL 44
            V  ND+GRVV LSL  NNL+GPIP +LGNL+AL  L
Sbjct:   57 VNVNDQGRVVGLSLIRNNLQGPIPSKLGNLSALTAL 92          
BLAST of mRNA_P-lacustris_contig921.15659.1 vs. uniprot
Match: D7FJV1_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJV1_ECTSI)

HSP 1 Score: 50.1 bits (118), Expect = 7.780e-5
Identity = 25/35 (71.43%), Postives = 27/35 (77.14%), Query Frame = 0
Query:    9 VTANDEGRVVKLSLYSNNLRGPIPRELGNLTALQR 43
            VT N +GRVV+L L  NNLRG IP ELGNL ALQR
Sbjct:   39 VTVNHQGRVVRLDLSFNNLRGHIPPELGNLAALQR 73          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig921.15659.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A6H5JFA4_9PHAE2.660e-782.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCS7_ECTSI2.890e-773.68LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5K3D6_9PHAE3.420e-762.22Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KME4_9PHAE2.110e-657.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G496_ECTSI4.260e-664.10Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
UPI000B787B249.720e-667.65inactive leucine-rich repeat receptor-like serine/... [more]
D7FUH5_ECTSI1.710e-569.44Leucine rich repeat protein n=1 Tax=Ectocarpus sil... [more]
A0A7X4IRU2_9BACT4.150e-556.52Uncharacterized protein n=2 Tax=Gemmatimonadetes b... [more]
A0A6H5L6T0_9PHAE6.230e-566.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FJV1_ECTSI7.780e-571.43LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 3..80
e-value: 2.6E-14
score: 54.3
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 19..57

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig921contigP-lacustris_contig921:72171..73927 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig921.15659.1mRNA_P-lacustris_contig921.15659.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig921 72171..73927 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig921.15659.1 ID=prot_P-lacustris_contig921.15659.1|Name=mRNA_P-lacustris_contig921.15659.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=101bp
CRSLGLVRVTANDEGRVVKLSLYSNNLRGPIPRELGNLTALQRLDLRANT
LSGPIHRAWKAHRTAGAQSLEQPAIRLHPAGAREPRSAADPRPWFQHSTR
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf