prot_P-lacustris_contig92.15645.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig92.15645.1
Unique Nameprot_P-lacustris_contig92.15645.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length1310
Homology
BLAST of mRNA_P-lacustris_contig92.15645.1 vs. uniprot
Match: D7FUP8_ECTSI (CAP-Gly domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUP8_ECTSI)

HSP 1 Score: 240 bits (612), Expect = 2.360e-60
Identity = 154/296 (52.03%), Postives = 176/296 (59.46%), Query Frame = 0
Query: 1013 GNGD-IYSSKEEKDDAREIAPGGRVESESEESLPTFMRPDGGMVPVAFLTGCAAAKIAPGSSEGCESIPMLFGHAGKNVIELVRPGEDATAGKVIWRSRKSLIKAAKQYVRSKVSSWLRRKNKSPDRGA-SQPTPPKAIEGLYLRETPDRQLALLKKVSFNGAGXXXXXXERITDGQGQGLGRMGHDVE-FGVILGGVSAAGVEGAVFGGGXXXXXXXXEEAELDGGNXXXXXXXXXXXXXXXXGEVDTGDPQEAE-SEEGYAVMLYPGGGLCVFETRGAVRCMSRGNHSWVTYVS 1304
            GN D +    EE++D  E+ PG   E++SE SLP FMRPDGGMV V FLTGC AAKIAPG SEGCES PML GH GKN++EL+RPG+    GKV WRSRKSLIK AKQ V SKVSS  RR+++SP+ G  S P PP+AI GLYLRET D +LAL+KK    G+G          DG+  G G  GHDVE FGV+LGGVS AG  GA                                      GEV           EE YA ML PGGGLCVF TRG VRCMSRG H W T+ +
Sbjct: 2063 GNQDGVDDEDEEREDVAEMGPGAGEENDSEPSLPGFMRPDGGMVTVEFLTGCRAAKIAPGLSEGCESTPMLLGHTGKNLMELIRPGKK---GKVAWRSRKSLIKIAKQSVASKVSSLFRRRSESPEGGGPSGPVPPQAIAGLYLRETSDGRLALMKKDPSGGSGGVGDGD---MDGEDLG-GAAGHDVEEFGVLLGGVSGAGA-GA--------------------------------------GEVGXXXXXXXXXGEEKYAAMLTPGGGLCVFGTRGGVRCMSRGVHRWATHAT 2312          
BLAST of mRNA_P-lacustris_contig92.15645.1 vs. uniprot
Match: A0A6H5JJQ7_9PHAE (CAP-Gly domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJQ7_9PHAE)

HSP 1 Score: 224 bits (570), Expect = 2.740e-55
Identity = 150/308 (48.70%), Postives = 169/308 (54.87%), Query Frame = 0
Query: 1013 GNGD-IYSSKEEKDDAREIAPGGRVESESE-------------ESLPTFMRPDGGMVPVAFLTGCAAAKIAPGSSEGCESIPMLFGHAGKNVIELVRPGEDATAGKVIWRSRKSLIKAAKQYVRSKVSSWLRRKNKSPDRGA-SQPTPPKAIEGLYLRETPDRQLALLKKVSFNGAGXXXXXXERITDGQGQGLGRMGHDV-EFGVILGGVSAAGVEGAVFGGGXXXXXXXXEEAELDGGNXXXXXXXXXXXXXXXXGEVDTGDPQEAESEEGYAVMLYPGGGLCVFETRGAVRCMSRGNHSWVTYVS 1304
            GN D + +  EEK D  E+ PG R E  SE              SLP FMRPDGGMV V FLTGC AAKIAPG SE C S PML G+ GKN++EL+RPG+    GKV WRSRKSLIK AKQ V  KVSS  RR++KSP+ G  S P PP+AI GL LRET D +LAL+K  S   +G          DG+  G G  GHDV EFGV+LGGV  AGVE AV                                     G            EE YA ML PGGGLCVF TRG VRCMSRG H W T+ +
Sbjct: 2368 GNQDGVDNEDEEKQDVAEMGPGAREEDNSEVSATLAGRSFGREPSLPAFMRPDGGMVTVEFLTGCRAAKIAPGLSEECGSTPMLLGYTGKNLMELIRPGKK---GKVAWRSRKSLIKTAKQSVGFKVSSMFRRRSKSPEGGGPSGPAPPQAIAGLSLRETSDGRLALMKDPSGGSSGGGDGD----MDGEDLG-GTAGHDVVEFGVLLGGVPEAGVEEAV------------------------------------AGXXXXXXXXXXXXEEKYAAMLTPGGGLCVFGTRGGVRCMSRGVHRWATHAT 2631          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig92.15645.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FUP8_ECTSI2.360e-6052.03CAP-Gly domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5JJQ7_9PHAE2.740e-5548.70CAP-Gly domain-containing protein n=1 Tax=Ectocarp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 487..507
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 568..594
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 595..1309
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..567
NoneNo IPR availableTMHMMTMhelixcoord: 572..594

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig92contigP-lacustris_contig92:186618..193850 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig92.15645.1mRNA_P-lacustris_contig92.15645.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig92 184993..194002 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig92.15645.1 ID=prot_P-lacustris_contig92.15645.1|Name=mRNA_P-lacustris_contig92.15645.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=1310bp
MEAAEVAAMKKGAVAEAVAVMEAVLATKAQTGVALKKGSSFSTKVATTTP
RLDVWRSAAGSSAGAGSIVRGAASAAVSTASCSKMGGSELDATAKLPQTE
GSSNPAGIATTTCTSAACSGSTTSRTDSPIVGESAATGDCASAAAPGGDT
LVPGSTVVTGLDSHSELSPQPLPTAPCDDASRRSSGGGGDTSDTAALDAG
VADATDDHDVPEAGMAQSDTDDTAKEPVHQGEGLFGQAAECEREPTPVEL
EDAEHAADGVASGGIDPSPAPESPDGDDHAGVFARRPSTACSDGADRRSR
GSSGDASEMTMFAAEGADAVDNGGPDAGAGYFGDFASDWDLSEALIMLFE
TENDATGTADTSRRSSASVELDDSAGVSAQEPPPAAHLDEAGGRSRPGSG
DASGTSGRGDEAADVANGRDSDSEVGHAGRGWGVSEALLALSEAEDDAVE
QGRQEEEDGAAEEFESETTESSPLGSEVEDVEDGRDSSEAEVALSEAEDE
VVLSEAEEDGTDELGHQEAEAAREGERENGRGRASPMERSYRVRVIAAGG
EGGGGGATRRGKRFAKRFATCCLGVMVTIAAVVVLAVGTAVVAAPPGAAV
STLDDAFKALGKTALDAAASLMPGDGEMAALHGVLRDTYRSFVTPGVGAT
NSDSSDRSSQKGSGGPQERPTPDRGGRGESRLFPVREEDNAAKSQPVLLE
LAAAESAERGSEVRGGDRGAGVTIRNGVFHDRDSPLPQEKGEVAGSKATE
TPRVASVSVFPASPRGSRETAAAATAGGGVAHLSAGAELDDENDLESKGG
ETISLKKQDPSLEVGADITAAMAPATAFYFVIEEDQGVATSEAVAAVVQA
EDSVKVFSAPVTSDGWVRAAMARDESYGVASVSPLPWGALSHDVCPSGVG
PLPKVSSAWVKKLDPKKWPQCSRTHAVPWRRNPSPVHRPPATTGAAGEAA
DSQTSGNSLTEDSTGKDVVGGERIAAAEVMDALPGEEYSVEIEEKLADTG
GAAAPVRVGEDVGNGDIYSSKEEKDDAREIAPGGRVESESEESLPTFMRP
DGGMVPVAFLTGCAAAKIAPGSSEGCESIPMLFGHAGKNVIELVRPGEDA
TAGKVIWRSRKSLIKAAKQYVRSKVSSWLRRKNKSPDRGASQPTPPKAIE
GLYLRETPDRQLALLKKVSFNGAGGGGGGGERITDGQGQGLGRMGHDVEF
GVILGGVSAAGVEGAVFGGGGLGGAGVGEEAELDGGNGEEEEEEEEEGRG
TGHGEVDTGDPQEAESEEGYAVMLYPGGGLCVFETRGAVRCMSRGNHSWV
TYVSEDKMP*
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