prot_P-lacustris_contig917.15620.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig917.15620.1
Unique Nameprot_P-lacustris_contig917.15620.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length491
Homology
BLAST of mRNA_P-lacustris_contig917.15620.1 vs. uniprot
Match: D8LM71_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM71_ECTSI)

HSP 1 Score: 398 bits (1023), Expect = 2.430e-131
Identity = 275/503 (54.67%), Postives = 316/503 (62.82%), Query Frame = 0
Query:    1 MNRGDTPLWAIEPVEK-HDTTGAPRSLWDRVESHLRPQEHQNEQLSEKLAMRPIIAPGLERTLLEAHLRLLLRKLGATSCSRDGTKGLASTTPGSRGGGGGDGVGGSGIAGRPRPHTFREGDLGRRSLDSTRSCCAPATADDLRDCGPRRK----RYCLVPRCFSTKDGMVAAPTAAPFVPLETQQDRAVYEYISKRVGTGGSCSAASSGEGRMPGTGVEW-----GSREALRGENGSRPGTGRGPGSARSARSAPECLEPGRCRLSVATIDTALGELRAAFEEEAQSLLEEIAELTKLLDDEAARKAHGERRSRPNLPPTTGS--GDNACGASPTNDPIPSSELRRYGKKLEEAMRSRERVAEVARRFALPGGQRAPGLSGTGRGSAVPGRKNSRKNRAGGVKLSLDHGISSSPHDDLPDS-ARSESLRCRDPRGVRKASVGRRGGSSGSG-SVQGEVRNRDAKVAXXXXXXXXXXXVLATKLRDAVRVSREEEAVGDDKFW 489
            M+R ++PLWAIE VE+ H   GAPRSLWDR+ESHLRPQE+QN+Q  +K+A RP +APGLERTLLEAHLRLLL KLG  S ++ G  GLAS +P S             + GRPRPHTFRE DL RRS  STR CCA        D  PRRK    R     R         + PT  P+VPLETQQDRAVYE++S    T G C   S G     G G        GS  A  G + SRPGTGR PGS+RSARSAPECLE GRC ++VATIDTALGELRAAFEEEAQ+LLEE+A+LT LL+DEAA KA  ER+SR +L P  G   G +   A+  NDPIPSSELRRYGKKLEEA+RSRE  A+VA+R ALP  QRAPGL          G+   +K R G     +     SS  +DLP S AR ES R R P   RKAS+GR  GS GSG SV+ + R  D  V             LATKLR AVR SREEE V DDK+W
Sbjct:    1 MSRCESPLWAIETVEEQHTAGGAPRSLWDRIESHLRPQENQNKQTWQKIAARPTMAPGLERTLLEAHLRLLLGKLGVPSGNQGGKGGLASMSPSSXXXXXXXXXXXXXV-GRPRPHTFREDDLCRRS--STRPCCATTAGSPGEDSSPRRKCLNGRKASYARXXXXXXXXCSEPTT-PYVPLETQQDRAVYEFLS----TSGECDGLSGGAAGRGGNGTHGEAERGGSEGAAVGNSRSRPGTGRRPGSSRSARSAPECLESGRC-VTVATIDTALGELRAAFEEEAQNLLEEVADLTGLLEDEAAVKADDERQSRRHLGPKAGDYGGKSNAAAAAANDPIPSSELRRYGKKLEEAVRSREHAADVAQRLALPR-QRAPGLE-----PGCGGKDGKKKGRGGMTVAPVSRSSRSS--EDLPGSTARLESSRHRGPGVGRKASIGRGSGSIGSGPSVEDKARGEDKAVGRRGGGGERG--ALATKLRGAVRASREEEVVDDDKYW 484          
BLAST of mRNA_P-lacustris_contig917.15620.1 vs. uniprot
Match: A0A6H5KD29_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD29_9PHAE)

HSP 1 Score: 145 bits (365), Expect = 1.860e-36
Identity = 113/215 (52.56%), Postives = 129/215 (60.00%), Query Frame = 0
Query:  277 QSLLEEIAELTKLLDDEAARKAHGERRSRPNLPPTTGSGDNACGASPTNDPIPSSELRRYGKKLEEAMRSRERVAEVARRFALPGGQRAPGLSGTGRGSAVPGRKNSRKNRAGGVKLSLDHGISSSPHDDLPDSA-RSESLRCRDPRGVRKASVGRRGGSSGSG-SVQGEVRNRDAKVAXXXXXXXXXXXVLATKLRDAVRVSREEEAVGDDKFW 489
            ++LLEE+A+LT LL+DEAA KA  ERRSR +L P  G       A+  ND IPSSELRRYGKKLEEA+RSRE  A VA+R ALP  QRAPGL  TG G      K+ RK   GG  ++     SS    DLP SA R +S R R P G RKAS+GR  GS GSG SV+ +    D  V             LATKLR  VR SREEE   DDKFW
Sbjct:   57 KNLLEEVADLTGLLEDEAAVKADDERRSRRHLGPKVGDSGGTSNAA-ANDSIPSSELRRYGKKLEEAVRSREHAAGVAQRLALPR-QRAPGLE-TGCGG-----KDGRKKGRGGTTVAP-VSRSSRCSQDLPGSAVRLQSSRHRGPGGGRKASIGRGSGSIGSGPSVEDKAPGEDKAVGRRGGGGERG--ALATKLRGTVRASREEEVADDDKFW 260          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig917.15620.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LM71_ECTSI2.430e-13154.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KD29_9PHAE1.860e-3652.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 269..296
IPR031367Coiled-coil domain-containing protein 24PFAMPF15669CCDC24coord: 40..303
e-value: 8.7E-11
score: 42.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig917contigP-lacustris_contig917:44981..49219 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig917.15620.1mRNA_P-lacustris_contig917.15620.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig917 44981..49219 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig917.15620.1 ID=prot_P-lacustris_contig917.15620.1|Name=mRNA_P-lacustris_contig917.15620.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=491bp
MNRGDTPLWAIEPVEKHDTTGAPRSLWDRVESHLRPQEHQNEQLSEKLAM
RPIIAPGLERTLLEAHLRLLLRKLGATSCSRDGTKGLASTTPGSRGGGGG
DGVGGSGIAGRPRPHTFREGDLGRRSLDSTRSCCAPATADDLRDCGPRRK
RYCLVPRCFSTKDGMVAAPTAAPFVPLETQQDRAVYEYISKRVGTGGSCS
AASSGEGRMPGTGVEWGSREALRGENGSRPGTGRGPGSARSARSAPECLE
PGRCRLSVATIDTALGELRAAFEEEAQSLLEEIAELTKLLDDEAARKAHG
ERRSRPNLPPTTGSGDNACGASPTNDPIPSSELRRYGKKLEEAMRSRERV
AEVARRFALPGGQRAPGLSGTGRGSAVPGRKNSRKNRAGGVKLSLDHGIS
SSPHDDLPDSARSESLRCRDPRGVRKASVGRRGGSSGSGSVQGEVRNRDA
KVAVGRRGDGRGRGVLATKLRDAVRVSREEEAVGDDKFWN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031367CCDC24